Pregenerated sensors for PRDM14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042414Ensembl transcript IDs: ENSMUST00000047577.7
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TACAGCCCCAGAGGATCTGATGTCTTCCTTGGGCCTCCACACGCATaGAGCACAGAAACATGCCCGCGGCGAACACTCATGCACATAGTC | + |
Preference number: 1 (lower is better) Translates to: YSPRGSDVFLGPPHA*STETCPRRTLMHIV Trigger: GACTATGTGCATGAGTGTTCGCCGCGGGCATGTTTCTGTGCTGCATGCGTGTGGAGGCCCAAGGAAGACATCAGATCCTCTGGGGCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR CCA 90 bp | CAGCACAGAAACATGCCCGCGGCGAACACTCATGCACATAGTCGCTaGCTACAGACACCGTATAACGGGGTGTTCAAGGCAGACAGGAGA | + |
Preference number: 1 (lower is better) Translates to: QHRNMPAANTHAHSR*LQTPYNGVFKADRR Trigger: TCTCCTGTCTGCCTTGAACACCCCGTTATACGGTGTCTGTAGCCAGCGACTATGTGCATGAGTGTTCGCCGCGGGCATGTTTCTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR TCA 90 bp | AGGTTTGGAGCTTCAGATCAACTACTCCATTCTCCAGATTCTCACTaGACACTTCAACCATGCCCACGCGACACAGACAAAGCAGGAATG | + |
Preference number: 1 (lower is better) Translates to: RFGASDQLLHSPDSH*TLQPCPRDTDKAGM Trigger: CATTCCTGCTTTGTCTGTGTCGCGTGGGCATGGTTGAAGTGTTCAGTGAGAATCTGGAGAATGGAGTAGTTGATCTGAAGCTCCAAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR TCA 90 bp | TCTTCTTTAATCACAAGACCCAGGACTTTATTCTCACTCCTGGTCTaGATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCAT | + |
Preference number: 1 (lower is better) Translates to: SSLITRPRTLFSLLV*MDSIRFGASDQLLH Trigger: ATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGTGAGAATAAAGTCCTGGGTCTTGTGATTAAAGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR CAA 90 bp | TTACAACTATCCGTAAATACAGCCCCAGAGGATCTGATGTCTTCCTaGGGCCTCCACACGCATGCAGCACAGAAACATGCCCGCGGCGAA | + |
Preference number: 2 (lower is better) Translates to: LQLSVNTAPEDLMSS*GLHTHAAQKHARGE Trigger: TTCGCCGCGGGCATGTTTCTGTGCTGCATGCGTGTGGAGGCCCAAGGAAGACATCAGATCCTCTGGGGCTGTATTTACGGATAGTTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR-3UTR TCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCACAGCCCCAGAGGATCTaGTGTCTTCCTTGGGCCTCC | + |
Preference number: 2 (lower is better) Translates to: YRTNLKPAWGWERKRERPQPQRI*CLPWAS Trigger: GGAGGCCCAAGGAAGACATCAGATCCTCTGGGGCTG...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR-3UTR GCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAGGGCCTCCACACGCATaGAGCACAGAAACATGCCCG | + |
Preference number: 2 (lower is better) Translates to: YRTNLKPAWGWERKRERPGPPHA*STETCP Trigger: CGGGCATGTTTCTGTGCTGCATGCGTGTGGAGGCCC...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR-3UTR TCA 90 bp | AAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAAAACACCACCACCACAGACAAAGCAGGAATaGGAGTCAGCGTTCTTGGTT | + |
Preference number: 2 (lower is better) Translates to: KASLGVGEKERETKTPPPQTKQE*ESAFLV Trigger: AACCAAGAACGCTGACTCTCATTCCTGCTTTGTCTG...TGGTGGTGGTGTTTTGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR-3UTR TCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCATCTCCAGATTCTCACTaGACACTTCAACCATGCCCA | + |
Preference number: 2 (lower is better) Translates to: YRTNLKPAWGWERKRERPSPDSH*TLQPCP Trigger: TGGGCATGGTTGAAGTGTTCAGTGAGAATCTGGAGA...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR GCA 72 bp | AGAGGATCTGATGTCTTCCTTGGGCCTCCACACGCATaGAGCACAGAAACATGCCCGCGGCGAACACTCATG | + |
Preference number: 3 (lower is better) Translates to: RGSDVFLGPPHA*STETCPRRTLM Trigger: CATGAGTGTTCGCCGCGGGCATGTTTCTGTGCTGCATGCGTGTGGAGGCCCAAGGAAGACATCAGATCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR CCA 72 bp | CAGAGGACCTGGGTTCAATTCCCGGTACCCACACAGTaGCTTACAACTATCCGTAAATACAGCCCCAGAGGA | + |
Preference number: 3 (lower is better) Translates to: QRTWVQFPVPTQ*LTTIRKYSPRG Trigger: TCCTCTGGGGCTGTATTTACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR CCA 72 bp | TTCAGCTATAGGACAAATTTAAAGCCAGCTTGGGGGTaGGAGAGAAAGAGAGAGAGACCAAAACACCACCAC | + |
Preference number: 3 (lower is better) Translates to: FSYRTNLKPAWG*ERKRERPKHHH Trigger: GTGGTGGTGTTTTGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATAGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR TCA 72 bp | ATCACAAGACCCAGGACTTTATTCTCACTCCTGGTCTaGATGGATTCCATAAGGTTTGGAGCTTCAGATCAA | + |
Preference number: 3 (lower is better) Translates to: ITRPRTLFSLLV*MDSIRFGASDQ Trigger: TTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGTGAGAATAAAGTCCTGGGTCTTGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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3UTR CCA 72 bp | ATTCTCACTCCTGGTCTGAATGGATTCCATAAGGTTTaGAGCTTCAGATCAACTACTCCATTCTCCAGATTC | + |
Preference number: 3 (lower is better) Translates to: ILTPGLNGFHKV*SFRSTTPFSRF Trigger: GAATCTGGAGAATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGTGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | AGAGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTACCCACCTCTGACCACTaGTTTGGCCACCGCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: RGPGFNSRYPHSGLQLSVPTSDH*FGHRRR Trigger: GCGGCGGCGGTGGCCAAATCAGTGGTCAGAGGTGGG...TACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | TTAAGTCCTAGCAGCACTAGCAGAGGACCTGGGTTCAATTCCCGGTACCCACACACTTTTCCCACAGGTTaGACACAGGTAGGGCCGGTG | + |
Preference number: 4 (lower is better) Translates to: LSPSSTSRGPGFNSRYPHTFPTG*TQVGPV Trigger: CACCGGCCCTACCTGTGTTCAACCTGTGGGAAAAGT...GTGTGGGTACCGGGAATTGAACCCAGGTCCTCTGCTAGTGCTGCTAGGACTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | TTAAGTCCTAGCAGCACTAGCAGAGGACCTGGGTTCAATTCCCGGTACCCACACAGACCTTCCGGAAGCTaGAGGGAGTCTTTGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LSPSSTSRGPGFNSRYPHRPSGS*RESLSR Trigger: CCTGGACAAAGACTCCCTCCAGCTTCCGGAAGGTCT...GTGTGGGTACCGGGAATTGAACCCAGGTCCTCTGCTAGTGCTGCTAGGACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | ATAGTCGCTGGCTACAGACACCGTATAACGGGGTGTTCAAGGCAGACAGGAGAGCAAATGAGGTCTGCATaGGGCAGAGACCTTCCGGAA | + |
Preference number: 4 (lower is better) Translates to: IVAGYRHRITGCSRQTGEQMRSA*GRDLPE Trigger: TTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTG...CTCTCCTGTCTGCCTTGAACACCCCGTTATACGGTGTCTGTAGCCAGCGACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | TTAAGTCCTAGCAGCACTAGCAGAGGACCTGGGTTCAATTCCCGGTACCCACACTGGCACATCACCAAATaGGGTCTGCATGAGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: LSPSSTSRGPGFNSRYPHWHITK*GLHEAE Trigger: CTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCA...GTGTGGGTACCGGGAATTGAACCCAGGTCCTCTGCTAGTGCTGCTAGGACTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | AAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAAAACACCACCACCATCACTCCTTTGGCAATaGAGTCGCTGCAGAACACGC | + |
Preference number: 4 (lower is better) Translates to: KASLGVGEKERETKTPPPSLLWQ*SRCRTR Trigger: GCGTGTTCTGCAGCGACTTCATTGCCAAAGGAGTGA...TGGTGGTGGTGTTTTGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | AAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAAAACACCACCACCACACACAAGCAGTTCCTaGTTCCGCTGGATGTCTCTA | + |
Preference number: 4 (lower is better) Translates to: KASLGVGEKERETKTPPPHTSSS*FRWMSL Trigger: TAGAGACATCCAGCGGAACCAGGAACTGCTTGTGTG...TGGTGGTGGTGTTTTGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | AGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAAAGACTCAGACAGCTGCTaGCCTCCTTGCTCAGTGACA | + |
Preference number: 4 (lower is better) Translates to: RTWVQFPVPTQWLTTIRKDSDSC*PPCSVT Trigger: TGTCACTGAGCAAGGAGGCCAGCAGCTGTCTGAGTC...TTTACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | AGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAAAGTACACGCACTGGTATaGCCTGTCTCCAGAGTGGAC | + |
Preference number: 4 (lower is better) Translates to: RTWVQFPVPTQWLTTIRKVHALV*PVSRVD Trigger: GTCCACTCTGGAGACAGGCCATACCAGTGCGTGTAC...TTTACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAGAGGACTCAGACAGCTaGTGGCCTCCTTGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: YRTNLKPAWGWERKRERPEDSDS*WPPCSV Trigger: CACTGAGCAAGGAGGCCAGCAGCTGTCTGAGTCCTC...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | AGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAAAAGAGTTGTCCCTGTGTaGCTTCACTTCGCTGGCATT | + |
Preference number: 4 (lower is better) Translates to: RTWVQFPVPTQWLTTIRKRVVPV*LHFAGI Trigger: AATGCCAGCGAAGTGAAGGCACACAGGGACAACTCT...TTTACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | TTAAGTCCTAGCAGCACTAGCAGAGGACCTGGGTTCAATTCCCGGTACCCACACACATCTGTAACCTTCTaGAGACTCTTCAGAGGACTC | + |
Preference number: 4 (lower is better) Translates to: LSPSSTSRGPGFNSRYPHTSVTF*RLFRGL Trigger: GAGTCCTCTGAAGAGTCTGCAGAAGGTTACAGATGT...GTGTGGGTACCGGGAATTGAACCCAGGTCCTCTGCTAGTGCTGCTAGGACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | AGAGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAGTGGGCAGCATGAGATaGAAAGGCTTTACCACAATG | + |
Preference number: 4 (lower is better) Translates to: RGPGFNSRYPHSGLQLSVVGSMR*KGFTTM Trigger: CATTGTGGTAAAGCCTTTGCATCTCATGCTGCCCAC...TACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAGAAGGGCTTCTCTCCTaGGTGCTGTCTGATGTGTGT | + |
Preference number: 4 (lower is better) Translates to: YRTNLKPAWGWERKRERPEGLLS*VLSDVC Trigger: ACACACATCAGACAGCACTCAGGAGAGAAGCCCTTC...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | GACAGGAGAGGGGGAACCTTTTCTTCTTTAATCACAAGACCCAGGACTTTATTCCTGGGACTCAAGCACTaGAGCTGCCAGTTTCCAAGG | + |
Preference number: 4 (lower is better) Translates to: DRRGGTFSSLITRPRTLFLGLKH*SCQFPR Trigger: CCTTGGAAACTGGCAGCTGCAGTGCTTGAGTCCCAG...GAATAAAGTCCTGGGTCTTGTGATTAAAGAAGAAAAGGTTCCCCCTCTCCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAGGCTTCTCTCCTGAGTaGTGTCTGATGTGTGTTCGG | + |
Preference number: 4 (lower is better) Translates to: YRTNLKPAWGWERKRERPGFSPE*CLMCVR Trigger: CCGAACACACATCAGACAGCACTCAGGAGAGAAGCC...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | AATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAAAACACCACCTCAAGCACTGCAGCTaGCAGTTTCCAAGGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: NLKPAWGWERKRERPKHHLKHCS*QFPRLK Trigger: TTTCAACCTTGGAAACTGGCAGCTGCAGTGCTTGAG...GTGGTGTTTTGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCATCACCAAATGAGGTCTaGATGAGGCAGAGACCTTCC | + |
Preference number: 4 (lower is better) Translates to: YRTNLKPAWGWERKRERPSPNEV*MRQRPS Trigger: GGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGA...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | TTTCCTTCTCTGTTGGTAAAAGTTAGACATCAACAAGAATTGCCAGTCTTCCTGACGGCCAGCAGGTTCTaGTCCTTGGGGAACCGAGCA | + |
Preference number: 4 (lower is better) Translates to: FPSLLVKVRHQQELPVFLTASRF*SLGNRA Trigger: TGCTCGGTTCCCCAAGGAGCAGAACCTGCTGGCCGT...CAGGAAGACTGGCAATTCTTGTTGATGTCTAACTTTTACCAACAGAGAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | ATAGTCGCTGGCTACAGACACCGTATAACGGGGTGTTCAAGGCAGACAGGAGAGTGTGCTTGTTCAGGCTaGAAGACTGAGAAAAACTTT | + |
Preference number: 4 (lower is better) Translates to: IVAGYRHRITGCSRQTGECACSG*KTEKNF Trigger: AAAGTTTTTCTCAGTCTTCCAGCCTGAACAAGCACA...CTCTCCTGTCTGCCTTGAACACCCCGTTATACGGTGTCTGTAGCCAGCGACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | GACAGGAGAGGGGGAACCTTTTCTTCTTTAATCACAAGACCCAGGACTTTATTCGTACAGTACACGCACTaGTATGGCCTGTCTCCAGAG | + |
Preference number: 4 (lower is better) Translates to: DRRGGTFSSLITRPRTLFVQYTH*YGLSPE Trigger: CTCTGGAGACAGGCCATACCAGTGCGTGTACTGTAC...GAATAAAGTCCTGGGTCTTGTGATTAAAGAAGAAAAGGTTCCCCCTCTCCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR GCA 90 bp | CCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCATTCCTGTGGGAACCAGGATaGCTGAAATTGCATGCTGTA | + |
Preference number: 4 (lower is better) Translates to: PGLNGFHKVWSFRSTTPFLWEPG*LKLHAV Trigger: TACAGCATGCAATTTCAGGCATCCTGGTTCCCACAG...GAATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | TTTCCTTCTCTGTTGGTAAAAGTTAGACATCAACAAGAATTGCCAGTCTTCCTGCTGTCGTGGGCAGCATaGGATGCAAAGGCTTTACCA | + |
Preference number: 4 (lower is better) Translates to: FPSLLVKVRHQQELPVFLLSWAA*DAKALP Trigger: TGGTAAAGCCTTTGCATCTCATGCTGCCCACGACAG...CAGGAAGACTGGCAATTCTTGTTGATGTCTAACTTTTACCAACAGAGAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR TCA 90 bp | ATTTTCAGCTATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGATTCAGGCTGGAAGACTaGGAAAAACTTTTCCCACAG | + |
Preference number: 4 (lower is better) Translates to: IFSYRTNLKPAWGWERKRFRLED*EKLFPQ Trigger: CTGTGGGAAAAGTTTTTCTCAGTCTTCCAGCCTGAA...TCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATAGCTGAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CCA 90 bp | ACTCCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCATTTTCAAAGGATCTTTaGCAGAGAGAACACGGAAAC | + |
Preference number: 4 (lower is better) Translates to: TPGLNGFHKVWSFRSTTPFSKDL*QREHGN Trigger: GTTTCCGTGTTCTCTCTGCCAAAGATCCTTTGAAAA...TGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | GCCTTTCCCACAAATATCGCAGGAGCTACGGCCATTGTCCTTGTGTaGGCGCCGGACGTGGCTGTCGTGGGCAGCATGAGATGCAAAGGC | + |
Preference number: 5 (lower is better) Translates to: AFPTNIAGATAIVLV*APDVAVVGSMRCKG Trigger: GCCTTTGCATCTCATGCTGCCCACGACAGCCACGTCCGGCGCTCACACAAGGACAATGGCCGTAGCTCCTGCGATATTTGTGGGAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | TGCAGAACACGCCAAAGTGTGGCACATCACCAAATGAGGTCTGCATaGGGCAGAGACCTTCCGGAAGCTGGAGGGAGTCTTTGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: CRTRQSVAHHQMRSA*GRDLPEAGGSLCPG Trigger: CCCTGGACAAAGACTCCCTCCAGCTTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCACACTTTGGCGTGTTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | AATGAAGTCGCTGCAGAACACGCCAAAGTGTGGCACATCACCAAATaGGGTCTGCATGAGGCAGAGACCTTCCGGAAGCTGGAGGGAGTC | + |
Preference number: 5 (lower is better) Translates to: NEVAAEHAKVWHITK*GLHEAETFRKLEGV Trigger: GACTCCCTCCAGCTTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCACACTTTGGCGTGTTCTGCAGCGACTTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 90 bp | GTGGGAACCAGGATGCCTGAAATTGCATGCTGTAAGTCGGTTGGGTaGTCCGGACTAGCGATGGCTCCATACAGAACGAAGCTCAGTTCC | + |
Preference number: 5 (lower is better) Translates to: VGTRMPEIACCKSVG*SGLAMAPYRTKLSS Trigger: GGAACTGAGCTTCGTTCTGTATGGAGCCATCGCTAGTCCGGAGCACCCAACCGACTTACAGCATGCAATTTCAGGCATCCTGGTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | AGAGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAAACTTCCTGTCCCCCTaGTCCACACAGGGCGTGTAC | + |
Preference number: 5 (lower is better) Translates to: RGPGFNSRYPHSGLQLSVNFLSP*STQGVY Trigger: GTACACGCCCTGTGTGGACAAGGGGGACAGGAAGTT...TACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | CCCACATCCGAGAGTTGTCCCTGTGTGCCTTCACTTCGCTGGCATTaGCCACTCTACCTCGAAAGGGTCCAAATCTCACTCCTTTGGCAA | + |
Preference number: 5 (lower is better) Translates to: PTSESCPCVPSLRWH*PLYLERVQISLLWQ Trigger: TTGCCAAAGGAGTGAGATTTGGACCCTTTCGAGGTAGAGTGGTCAATGCCAGCGAAGTGAAGGCACACAGGGACAACTCTCGGATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | AGAGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAGCCGAGGACCAAATTTaGGTTGCTGGAACCGCTGCT | + |
Preference number: 5 (lower is better) Translates to: RGPGFNSRYPHSGLQLSVAEDQI*VAGTAA Trigger: AGCAGCGGTTCCAGCAACCAAAATTTGGTCCTCGGC...TACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | AGGACCTGGGTTCAATTCCCGGTACCCACACAGTGGCTTACAACTATCCGTAAATCCTCCTCTGTGAAGTaGAAGCCGCAAAACGGCAGC | + |
Preference number: 5 (lower is better) Translates to: RTWVQFPVPTQWLTTIRKSSSVK*KPQNGS Trigger: GCTGCCGTTTTGCGGCTTCAACTTCACAGAGGAGGA...TTTACGGATAGTTGTAAGCCACTGTGTGGGTACCGGGAATTGAACCCAGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 90 bp | GTGACCATCTTCAAAAATTTCCCACATCCGAGAGTTGTCCCTGTGTaGCTTCACTTCGCTGGCATTGACCACTCTACCTCGAAAGGGTCC | + |
Preference number: 5 (lower is better) Translates to: VTIFKNFPHPRVVPV*LHFAGIDHSTSKGS Trigger: GGACCCTTTCGAGGTAGAGTGGTCAATGCCAGCGAAGTGAAGGCACACAGGGACAACTCTCGGATGTGGGAAATTTTTGAAGATGGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | ACTCCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCACAGCTGCTGGCCTCCTaGCTCAGTGACACGGAGGTT | + |
Preference number: 5 (lower is better) Translates to: TPGLNGFHKVWSFRSTTPQLLAS*LSDTEV Trigger: AACCTCCGTGTCACTGAGCAAGGAGGCCAGCAGCTG...TGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | GTGCTTGTTCAGGCTGGAAGACTGAGAAAAACTTTTCCCACAGGTTaGACACAGGTAGGGCCGGTGCCTCTCATGGACGTGAAGAATATG | + |
Preference number: 5 (lower is better) Translates to: VLVQAGRLRKTFPTG*TQVGPVPLMDVKNM Trigger: CATATTCTTCACGTCCATGAGAGGCACCGGCCCTACCTGTGTTCAACCTGTGGGAAAAGTTTTTCTCAGTCTTCCAGCCTGAACAAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | GACAGGAGAGGGGGAACCTTTTCTTCTTTAATCACAAGACCCAGGACTTTATTCAGCAGGTTCTGCTCCTaGGGGAACCGAGCACAGTTG | + |
Preference number: 5 (lower is better) Translates to: DRRGGTFSSLITRPRTLFSRFCS*GNRAQL Trigger: CAACTGTGCTCGGTTCCCCAAGGAGCAGAACCTGCT...GAATAAAGTCCTGGGTCTTGTGATTAAAGAAGAAAAGGTTCCCCCTCTCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | AAATCGTGGTACTTCGGGAGTGAATTGAGGAATTCGGTTCCATGGTaGCAATTTGTACCAGGGCAGATTGTAGAGCGGCTCGCTCTGAAC | + |
Preference number: 5 (lower is better) Translates to: KSWYFGSELRNSVPW*QFVPGQIVERLALN Trigger: GTTCAGAGCGAGCCGCTCTACAATCTGCCCTGGTACAAATTGTCACCATGGAACCGAATTCCTCAATTCACTCCCGAAGTACCACGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | CCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCATTCTCCCACATCCGAGAGTaGTCCCTGTGTGCCTTCACT | + |
Preference number: 5 (lower is better) Translates to: PGLNGFHKVWSFRSTTPFSHIRE*SLCAFT Trigger: AGTGAAGGCACACAGGGACAACTCTCGGATGTGGGA...GAATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | TATAGGACAAATTTAAAGCCAGCTTGGGGGTGGGAGAGAAAGAGAGAGAGACCAAACTTTTCCCACAGGTaGAACACAGGTAGGGCCGGT | + |
Preference number: 5 (lower is better) Translates to: YRTNLKPAWGWERKRERPNFSHR*NTGRAG Trigger: ACCGGCCCTACCTGTGTTCAACCTGTGGGAAAAGTT...TGGTCTCTCTCTCTTTCTCTCCCACCCCCAAGCTGGCTTTAAATTTGTCCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 90 bp | GACATCCAGTTCCCAGAACCTTTGCCGTCGATAAAATGGCTCAGGTaGCCATCTTCAAAAATTTCCCACATCCGAGAGTTGTCCCTGTGT | + |
Preference number: 5 (lower is better) Translates to: DIQFPEPLPSIKWLR*PSSKISHIRELSLC Trigger: ACACAGGGACAACTCTCGGATGTGGGAAATTTTTGAAGATGGTCACCTGAGCCATTTTATCGACGGCAAAGGTTCTGGGAACTGGATGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | ACTCCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCAATAAAATATCTGCCCTaGGTGCTGCACGGCCAGCAG | + |
Preference number: 5 (lower is better) Translates to: TPGLNGFHKVWSFRSTTPIKYLP*VLHGQQ Trigger: CTGCTGGCCGTGCAGCACCAAGGGCAGATATTTTAT...TGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | ACTCCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCAGGCATAGAAAGCCTCTaGATCCAGGAAGCCTTTCCC | + |
Preference number: 5 (lower is better) Translates to: TPGLNGFHKVWSFRSTTPGIESL*IQEAFP Trigger: GGGAAAGGCTTCCTGGATCAAGAGGCTTTCTATGCC...TGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | CCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCATTCCCAAATCTCACTCCTTaGGCAATGAAGTCGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: PGLNGFHKVWSFRSTTPFPNLTP*AMKSLQ Trigger: CTGCAGCGACTTCATTGCCAAAGGAGTGAGATTTGG...GAATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | TTTCCTTCTCTGTTGGTAAAAGTTAGACATCAACAAGAATTGCCAGTCTTCCTGTGCCAGTTTCCAAGGTaGAAACTCCTCCTCGGTGGT | + |
Preference number: 5 (lower is better) Translates to: FPSLLVKVRHQQELPVFLCQFPR*KLLLGG Trigger: ACCACCGAGGAGGAGTTTCAACCTTGGAAACTGGCA...CAGGAAGACTGGCAATTCTTGTTGATGTCTAACTTTTACCAACAGAGAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS-3UTR CAA 90 bp | CCTGGTCTGAATGGATTCCATAAGGTTTGGAGCTTCAGATCAACTACTCCATTCCTTTTCAAAGGATCTTaGGCAGAGAGAACACGGAAA | + |
Preference number: 5 (lower is better) Translates to: PGLNGFHKVWSFRSTTPFLFKGS*AERTRK Trigger: TTTCCGTGTTCTCTCTGCCAAAGATCCTTTGAAAAG...GAATGGAGTAGTTGATCTGAAGCTCCAAACCTTATGGAATCCATTCAGACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | GGGGATGGCAGAAGTAAATTTTCAGCTTCCCACCTCTaGCCACTGATTTGGCCACCGCCGCCGCCGAGGACC | + |
Preference number: 6 (lower is better) Translates to: GDGRSKFSASHL*PLIWPPPPPRT Trigger: GGTCCTCGGCGGCGGCGGTGGCCAAATCAGTGGTCAGAGGTGGGAAGCTGAAAATTTACTTCTGCCATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | CAGAGGACTCAGACAGCTGCTGGCCTCCTTGCTCAGTaGCACGGAGGTTCATGGGAACGCCCAGGAACTTCT | + |
Preference number: 6 (lower is better) Translates to: QRTQTAAGLLAQ*HGGSWERPGTS Trigger: AGAAGTTCCTGGGCGTTCCCATGAACCTCCGTGTCACTGAGCAAGGAGGCCAGCAGCTGTCTGAGTCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | ACAAATATCGCAGGAGCTACGGCCATTGTCCTTGTGTaGGCGCCGGACGTGGCTGTCGTGGGCAGCATGAGA | + |
Preference number: 6 (lower is better) Translates to: TNIAGATAIVLV*APDVAVVGSMR Trigger: TCTCATGCTGCCCACGACAGCCACGTCCGGCGCTCACACAAGGACAATGGCCGTAGCTCCTGCGATATTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 72 bp | AAGAGGGGCCATCGCCTGGGACTCAAGCACTGCAGCTaGCAGTTTCCAAGGTTGAAACTCCTCCTCGGTGGT | + |
Preference number: 6 (lower is better) Translates to: KRGHRLGLKHCS*QFPRLKLLLGG Trigger: ACCACCGAGGAGGAGTTTCAACCTTGGAAACTGGCAGCTGCAGTGCTTGAGTCCCAGGCGATGGCCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | AGACTCTTCAGAGGACTCAGACAGCTGCTGGCCTCCTaGCTCAGTGACACGGAGGTTCATGGGAACGCCCAG | + |
Preference number: 6 (lower is better) Translates to: RLFRGLRQLLAS*LSDTEVHGNAQ Trigger: CTGGGCGTTCCCATGAACCTCCGTGTCACTGAGCAAGGAGGCCAGCAGCTGTCTGAGTCCTCTGAAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | AAGCCTTTCCCACAAATATCGCAGGAGCTACGGCCATaGTCCTTGTGTGAGCGCCGGACGTGGCTGTCGTGG | + |
Preference number: 6 (lower is better) Translates to: KPFPQISQELRP*SLCERRTWLSW Trigger: CCACGACAGCCACGTCCGGCGCTCACACAAGGACAATGGCCGTAGCTCCTGCGATATTTGTGGGAAAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 72 bp | AGCATCAAGAGGGGCCATCGCCTGGGACTCAAGCACTaGAGCTGCCAGTTTCCAAGGTTGAAACTCCTCCTC | + |
Preference number: 6 (lower is better) Translates to: SIKRGHRLGLKH*SCQFPRLKLLL Trigger: GAGGAGGAGTTTCAACCTTGGAAACTGGCAGCTGCAGTGCTTGAGTCCCAGGCGATGGCCCCTCTTGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CCA 72 bp | GCAGTCATCCGAAAAGCATCAAGAGGGGCCATCGCCTaGGACTCAAGCACTGCAGCTGCCAGTTTCCAAGGT | + |
Preference number: 6 (lower is better) Translates to: AVIRKASRGAIA*DSSTAAASFQG Trigger: ACCTTGGAAACTGGCAGCTGCAGTGCTTGAGTCCCAGGCGATGGCCCCTCTTGATGCTTTTCGGATGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | TGGGACTCAAGCACTGCAGCTGCCAGTTTCCAAGGTTaGAACTCCTCCTCGGTGGTGGCGAGGTTCCTAAAG | + |
Preference number: 6 (lower is better) Translates to: WDSSTAAASFQG*NSSSVVARFLK Trigger: CTTTAGGAACCTCGCCACCACCGAGGAGGAGTTTCAACCTTGGAAACTGGCAGCTGCAGTGCTTGAGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | CGCCAAAGTGTGGCACATCACCAAATGAGGTCTGCATaGGGCAGAGACCTTCCGGAAGCTGGAGGGAGTCTT | + |
Preference number: 6 (lower is better) Translates to: RQSVAHHQMRSA*GRDLPEAGGSL Trigger: AAGACTCCCTCCAGCTTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCACACTTTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | GCTGCAGAACACGCCAAAGTGTGGCACATCACCAAATaGGGTCTGCATGAGGCAGAGACCTTCCGGAAGCTG | + |
Preference number: 6 (lower is better) Translates to: AAEHAKVWHITK*GLHEAETFRKL Trigger: CAGCTTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCACACTTTGGCGTGTTCTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | CCAGCAGGTTCTGCTCCTTGGGGAACCGAGCACAGTTaGCATAGGACATCCAGTTCCCAGAACCTTTGCCGT | + |
Preference number: 6 (lower is better) Translates to: PAGSAPWGTEHS*HRTSSSQNLCR Trigger: ACGGCAAAGGTTCTGGGAACTGGATGTCCTATGTCAACTGTGCTCGGTTCCCCAAGGAGCAGAACCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | TTGTGTGAGCGCCGGACGTGGCTGTCGTGGGCAGCATaGGATGCAAAGGCTTTACCACAATGCTTGCACTTG | + |
Preference number: 6 (lower is better) Translates to: LCERRTWLSWAA*DAKALPQCLHL Trigger: CAAGTGCAAGCATTGTGGTAAAGCCTTTGCATCTCATGCTGCCCACGACAGCCACGTCCGGCGCTCACACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 72 bp | AACACGCCAAAGTGTGGCACATCACCAAATGAGGTCTaGATGAGGCAGAGACCTTCCGGAAGCTGGAGGGAG | + |
Preference number: 6 (lower is better) Translates to: NTPKCGTSPNEV*MRQRPSGSWRE Trigger: CTCCCTCCAGCTTCCGGAAGGTCTCTGCCTCATGCAGACCTCATTTGGTGATGTGCCACACTTTGGCGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CCA 72 bp | TGGATCCGGAGGCGGTCGCGCTTTTCAAAGGATCTTTaGCAGAGAGAACACGGAAACTTCCTGTCCCCCTTG | + |
Preference number: 6 (lower is better) Translates to: WIRRRSRFSKDL*QREHGNFLSPL Trigger: CAAGGGGGACAGGAAGTTTCCGTGTTCTCTCTGCCAAAGATCCTTTGAAAAGCGCGACCGCCTCCGGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | CAGGCTGGAAGACTGAGAAAAACTTTTCCCACAGGTTaGACACAGGTAGGGCCGGTGCCTCTCATGGACGTG | + |
Preference number: 6 (lower is better) Translates to: QAGRLRKTFPTG*TQVGPVPLMDV Trigger: CACGTCCATGAGAGGCACCGGCCCTACCTGTGTTCAACCTGTGGGAAAAGTTTTTCTCAGTCTTCCAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | ATGGATCCGGAGGCGGTCGCGCTTTTCAAAGGATCTTaGGCAGAGAGAACACGGAAACTTCCTGTCCCCCTT | + |
Preference number: 6 (lower is better) Translates to: MDPEAVALFKGS*AERTRKLPVPL Trigger: AAGGGGGACAGGAAGTTTCCGTGTTCTCTCTGCCAAAGATCCTTTGAAAAGCGCGACCGCCTCCGGATCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 90 bp | TCCCACATCCGAGAGTTGTCCCTGTGTGCCTTCACTTCGCTGGCATaGACCACTCTACCTCGAAAGGGTCCAAATCTCACTCCTTTGGCA | + |
Preference number: 6 (lower is better) Translates to: SHIRELSLCAFTSLA*TTLPRKGPNLTPLA Trigger: TGCCAAAGGAGTGAGATTTGGACCCTTTCGAGGTAGAGTGGTCAATGCCAGCGAAGTGAAGGCACACAGGGACAACTCTCGGATGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS GCA 72 bp | AGGATGCCTGAAATTGCATGCTGTAAGTCGGTTGGGTaGTCCGGACTAGCGATGGCTCCATACAGAACGAAG | + |
Preference number: 6 (lower is better) Translates to: RMPEIACCKSVG*SGLAMAPYRTK Trigger: CTTCGTTCTGTATGGAGCCATCGCTAGTCCGGAGCACCCAACCGACTTACAGCATGCAATTTCAGGCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | CTTTGGCAGAGAGAACACGGAAACTTCCTGTCCCCCTaGTCCACACAGGGCGTGTACTTCAGGTGCTTATCT | + |
Preference number: 6 (lower is better) Translates to: LWQREHGNFLSP*STQGVYFRCLS Trigger: AGATAAGCACCTGAAGTACACGCCCTGTGTGGACAAGGGGGACAGGAAGTTTCCGTGTTCTCTCTGCCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 90 bp | GTGAAGAATATGGATCCGGAGGCGGTCGCGCTTTTCAAAGGATCTTaGGCAGAGAGAACACGGAAACTTCCTGTCCCCCTTGTCCACACA | + |
Preference number: 6 (lower is better) Translates to: VKNMDPEAVALFKGS*AERTRKLPVPLVHT Trigger: TGTGTGGACAAGGGGGACAGGAAGTTTCCGTGTTCTCTCTGCCAAAGATCCTTTGAAAAGCGCGACCGCCTCCGGATCCATATTCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 90 bp | CTGGCATTGACCACTCTACCTCGAAAGGGTCCAAATCTCACTCCTTaGGCAATGAAGTCGCTGCAGAACACGCCAAAGTGTGGCACATCA | + |
Preference number: 6 (lower is better) Translates to: LALTTLPRKGPNLTP*AMKSLQNTPKCGTS Trigger: TGATGTGCCACACTTTGGCGTGTTCTGCAGCGACTTCATTGCCAAAGGAGTGAGATTTGGACCCTTTCGAGGTAGAGTGGTCAATGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | TACCTCGAAAGGGTCCAAATCTCACTCCTTTGGCAATaGAGTCGCTGCAGAACACGCCAAAGTGTGGCACAT | + |
Preference number: 6 (lower is better) Translates to: YLERVQISLLWQ*SRCRTRQSVAH Trigger: ATGTGCCACACTTTGGCGTGTTCTGCAGCGACTTCATTGCCAAAGGAGTGAGATTTGGACCCTTTCGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | ACCACTCTACCTCGAAAGGGTCCAAATCTCACTCCTTaGGCAATGAAGTCGCTGCAGAACACGCCAAAGTGT | + |
Preference number: 6 (lower is better) Translates to: TTLPRKGPNLTP*AMKSLQNTPKC Trigger: ACACTTTGGCGTGTTCTGCAGCGACTTCATTGCCAAAGGAGTGAGATTTGGACCCTTTCGAGGTAGAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | TACTTCGGGAGTGAATTGAGGAATTCGGTTCCATGGTaGCAATTTGTACCAGGGCAGATTGTAGAGCGGCTC | + |
Preference number: 6 (lower is better) Translates to: YFGSELRNSVPW*QFVPGQIVERL Trigger: GAGCCGCTCTACAATCTGCCCTGGTACAAATTGTCACCATGGAACCGAATTCCTCAATTCACTCCCGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS CAA 72 bp | GGTTTTATGAAGCCTCATGTGGGCATAGAAAGCCTCTaGATCCAGGAAGCCTTTCCCACAAATATCGCAGGA | + |
Preference number: 6 (lower is better) Translates to: GFMKPHVGIESL*IQEAFPTNIAG Trigger: TCCTGCGATATTTGTGGGAAAGGCTTCCTGGATCAAGAGGCTTTCTATGCCCACATGAGGCTTCATAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |
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CDS TCA 72 bp | TTCCCAGAACCTTTGCCGTCGATAAAATGGCTCAGGTaGCCATCTTCAAAAATTTCCCACATCCGAGAGTTG | + |
Preference number: 6 (lower is better) Translates to: FPEPLPSIKWLR*PSSKISHIREL Trigger: CAACTCTCGGATGTGGGAAATTTTTGAAGATGGTCACCTGAGCCATTTTATCGACGGCAAAGGTTCTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047577.7 |