Pregenerated sensors for PRDM10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042496Ensembl transcript IDs: ENSMUST00000074510.4, ENSMUST00000117389.8, ENSMUST00000215499.2, ENSMUST00000215847.2
Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGATCATGCGTCCTTTTGTCTTCCAGGGAGTCTGCTTGTGGACCGTaGGGCCAGATCGGCCTGGGGACAGCATTTGTAGGGAGGACTGCT | + |
Preference number: 1 (lower is better) Translates to: RSCVLLSSRESACGP*GQIGLGTAFVGRTA Trigger: AGCAGTCCTCCCTACAAATGCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | CCTGTTCAGATCATGCGTCCTTTTGTCTTCCAGGGAGTCTGCTTGTaGACCGTGAGGCCAGATCGGCCTGGGGACAGCATTTGTAGGGAG | + |
Preference number: 1 (lower is better) Translates to: PVQIMRPFVFQGVCL*TVRPDRPGDSICRE Trigger: CTCCCTACAAATGCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCTGAACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | ACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTaGAGTTGTAGCTCAGTGGTGGGAAACCTGCCTAGCATGCAAGAG | + |
Preference number: 1 (lower is better) Translates to: TKIRPMLGTRVRGGG*SCSSVVGNLPSMQE Trigger: CTCTTGCATGCTAGGCAGGTTTCCCACCACTGAGCTACAACTCCAGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 90 bp | GAAAGATCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTaGGAGGTGGGGGCTGGAGTTGTAGCTCAGTGGTGGGAAACCTGC | + |
Preference number: 1 (lower is better) Translates to: ERSKVLKYAQCWEPE*EVGAGVVAQWWETC Trigger: GCAGGTTTCCCACCACTGAGCTACAACTCCAGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGATCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | GAGGGAGAGATCACCATAGAAACCTTGGCCACATGTTTCCCAGATTaGGCTGTCAGAGGGATTATACTCTGCCATCTCTTCTGTCACCTC | + |
Preference number: 1 (lower is better) Translates to: EGEITIETLATCFPD*AVRGIILCHLFCHL Trigger: GAGGTGACAGAAGAGATGGCAGAGTATAATCCCTCTGACAGCCCAATCTGGGAAACATGTGGCCAAGGTTTCTATGGTGATCTCTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 90 bp | GGTACATCCTGTCTCCACCTTTGGTATGAACATAATACCAGCCACTaGGCATTTCCACGAAGGGCAAGTAAGGCTTGTCAGTGTGTTCAA | + |
Preference number: 1 (lower is better) Translates to: GTSCLHLWYEHNTSH*AFPRRASKACQCVQ Trigger: TTGAACACACTGACAAGCCTTACTTGCCCTTCGTGGAAATGCTCAGTGGCTGGTATTATGTTCATACCAAAGGTGGAGACAGGATGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | TGTACCTTTGAGATGGTCTACCGCTCCTTACCTCCTAAGTCTCTCTaGATAAGACCCTGGGATAGTTACAACACTACAGGCTTTTTGGAA | + |
Preference number: 1 (lower is better) Translates to: CTFEMVYRSLPPKSL*IRPWDSYNTTGFLE Trigger: TTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCAGAGAGACTTAGGAGGTAAGGAGCGGTAGACCATCTCAAAGGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | AAATATTCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTaGGAGGGAGAGATCACCATAGAAACCTTGGCCACATGTTTCCCA | + |
Preference number: 1 (lower is better) Translates to: KYSRCNECSLQCQCV*EGEITIETLATCFP Trigger: TGGGAAACATGTGGCCAAGGTTTCTATGGTGATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGAATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 90 bp | CAATACAGTCAGCCCTGCTTGTTCAGGGTTCCACCAACAACAGAGTaGAAATACATGAATAACATCACCATCTGTACTGAAGCCCAAACA | + |
Preference number: 1 (lower is better) Translates to: QYSQPCLFRVPPTTE*KYMNNITICTEAQT Trigger: TGTTTGGGCTTCAGTACAGATGGTGATGTTATTCATGTATTTTCACTCTGTTGTTGGTGGAACCCTGAACAAGCAGGGCTGACTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR TCA 90 bp | AGTCATTACACCACAGGACTTGGGGGAACAGAGTCTTGCATTTCGTaGCTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTG | + |
Preference number: 1 (lower is better) Translates to: SHYTTGLGGTESCIS*LESTFHVEITVTFL Trigger: CAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACTCTGTTCCCCCAAGTCCTGTGGTGTAATGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 90 bp | AAAATATACATCCAACCCACTTCAAAATATTCCCGCTGTAATGAATaGAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCACCATA | + |
Preference number: 1 (lower is better) Translates to: KIYIQPTSKYSRCNE*SLQCQCVWEGEITI Trigger: TATGGTGATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGAATATTTTGAAGTGGGTTGGATGTATATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 90 bp | ATTACACCACAGGACTTGGGGGAACAGAGTCTTGCATTTCGTGACTaGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTTGG | + |
Preference number: 1 (lower is better) Translates to: ITPQDLGEQSLAFRD*SQHFMLKLLLPFCW Trigger: CCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACTCTGTTCCCCCAAGTCCTGTGGTGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 90 bp | CTATTCCCATTCTATTTCATTGACAAGATTATTAAAAGTCTACAGTaGACAATACAGTCAGCCCTGCTTGTTCAGGGTTCCACCAACAAC | + |
Preference number: 1 (lower is better) Translates to: LFPFYFIDKIIKSLQ*TIQSALLVQGSTNN Trigger: GTTGTTGGTGGAACCCTGAACAAGCAGGGCTGACTGTATTGTGCACTGTAGACTTTTAATAATCTTGTCAATGAAATAGAATGGGAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR TCA 90 bp | GGGAACAGAGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTaGAATTACTGTTACCTTTTTGTTGGCAAAGATACAGAGTCCATT | + |
Preference number: 1 (lower is better) Translates to: GNRVLHFVTGVNISC*NYCYLFVGKDTESI Trigger: AATGGACTCTGTATCTTTGCCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACTCTGTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCACCATGCTTCACACCCTaGTGTAGGCCCCTGACGAAC | + |
Preference number: 2 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPPCFTP*CRPLTN Trigger: GTTCGTCAGGGGCCTACAGCAGGGTGTGAAGCATGG...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR-3UTR TCA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCTCTGCTTGTGGACCGTaGGGCCAGATCGGCCTGGGG | + |
Preference number: 2 (lower is better) Translates to: SRCNECSLQCQCVWEGEISACGP*GQIGLG Trigger: CCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGA...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 90 bp | ACTCCTGTTCAGATCATGCGTCCTTTTGTCTTCCAGGGAGTCTGCTaGTGGACCGTGAGGCCAGATCGGCCTGGGGACAGCATTTGTAGG | + |
Preference number: 2 (lower is better) Translates to: TPVQIMRPFVFQGVC*WTVRPDRPGDSICR Trigger: CCTACAAATGCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCTGAACAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR TCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCATATCTGAAATGTGCGTaGGGACATGCATGGGCTCTA | + |
Preference number: 2 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPYLKCA*GHAWAL Trigger: TAGAGCCCATGCATGTCCTCACGCACATTTCAGATA...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR-3UTR TCA 90 bp | GGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAACACATCAATTGACTCAAGGTaGCCTTGGCAAAAATCACCC | + |
Preference number: 2 (lower is better) Translates to: GDTSPLDPQQIRLPNRNTSIDSR*PWQKSP Trigger: GGGTGATTTTTGCCAAGGTCACCTTGAGTCAATTGA...TGTGTTCCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR TCA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTAAGTTAACTTTCCCCTaGAAGAGCTGCATTCCATGG | + |
Preference number: 2 (lower is better) Translates to: SKVLKYAQCWEPECEVGAKLTFP*KSCIPW Trigger: CCATGGAATGCAGCTCTTTCAGGGGAAAGTTAACTT...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGTCCTGTCTCCACCTTTaGTATGAACATAATACCAGC | + |
Preference number: 2 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLSCLHL*YEHNTS Trigger: GCTGGTATTATGTTCATACCAAAGGTGGAGACAGGA...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | GGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAACACACTACGTTGTCAAAACTaGAGTTTCCAAACGCTTGAG | + |
Preference number: 2 (lower is better) Translates to: GDTSPLDPQQIRLPNRNTLRCQN*SFQTLE Trigger: CTCAAGCGTTTGGAAACTGCAGTTTTGACAACGTAG...TGTGTTCCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAAGAGCTGCATTCCATaGCAGAAATCCCAAGGGTTT | + |
Preference number: 2 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRKSCIP*QKSQGF Trigger: AAACCCTTGGGATTTCTGCCATGGAATGCAGCTCTT...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATTTTGATGCCATAGCTTaGATATCAGAAGTCCAGTGG | + |
Preference number: 2 (lower is better) Translates to: AGLKVCTPTPSSSRANINFDAIA*ISEVQW Trigger: CCACTGGACTTCTGATATCCAAGCTATGGCATCAAA...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTCAGGGAGTCTGCTTGTaGACCGTGAGGCCAGATCGG | + |
Preference number: 2 (lower is better) Translates to: KRGDTLLAHIKENPTDQIQGVCL*TVRPDR Trigger: CCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTG...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCAGGGAGGACTGCTGCTaGCCAGGTTTCAGGTTTTCT | + |
Preference number: 2 (lower is better) Translates to: RANINYKNSNCTFEMVYRREDCC*PGFRFS Trigger: AGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCT...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCGTTGTAGCTCAGTGGTaGGAAACCTGCCTAGCATGC | + |
Preference number: 2 (lower is better) Translates to: RANINYKNSNCTFEMVYRVVAQW*ETCLAC Trigger: GCATGCTAGGCAGGTTTCCCACCACTGAGCTACAAC...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATACAGTGGCCACGGACTTaGTACATCCTGTCTCCACCT | + |
Preference number: 2 (lower is better) Translates to: PNKLAAFVKITENSMHEIQWPRT*YILSPP Trigger: AGGTGGAGACAGGATGTACCAAGTCCGTGGCCACTG...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTACAGATTCCAAAATTGTaGTGTGAGCTCTGGACTCCA | + |
Preference number: 2 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVQIPKL*CELWTP Trigger: TGGAGTCCAGAGCTCACACCACAATTTTGGAATCTG...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR TCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGATTCAGACATGGTCTATaGATGAGATCCCAAGAGGGA | + |
Preference number: 2 (lower is better) Translates to: MGQLQLLIRYFLALHLLRFRHGL*MRSQEG Trigger: TCCCTCTTGGGATCTCATTCATAGACCATGTCTGAA...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTATATCAGAAGTCCAGTaGCCACGGACTTGGTACATC | + |
Preference number: 2 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPISEVQ*PRTWYI Trigger: GATGTACCAAGTCCGTGGCCACTGGACTTCTGATAT...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | TGGATAAGACCCTGGGATAGTTACAACACTACAGGCTTTTTGGAAAACCCGAGACTGTTACCTTTTTGTTaGCAAAGATACAGAGTCCAT | + |
Preference number: 2 (lower is better) Translates to: WIRPWDSYNTTGFLENPRLLPFC*QRYRVH Trigger: ATGGACTCTGTATCTTTGCCAACAAAAAGGTAACAG...TCTCGGGTTTTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 90 bp | GGGGAACAGAGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTaGAAATTACTGTTACCTTTTTGTTGGCAAAGATACAGAGTCCAT | + |
Preference number: 2 (lower is better) Translates to: GEQSLAFRDWSQHFM*KLLLPFCWQRYRVH Trigger: ATGGACTCTGTATCTTTGCCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACTCTGTTCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGATTAAAAGTCTACAGTaGACAATACAGTCAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: YEISHFTRNSSSVHTVAWIKSLQ*TIQSAL Trigger: CAGGGCTGACTGTATTGTGCACTGTAGACTTTTAAT...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR-3UTR CCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCCCCTCAGTGGGAAGTTaGTTATCTTATATCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: RANINYKNSNCTFEMVYRPSVGS*LSYIKV Trigger: GACCTTGATATAAGATAACCAACTTCCCACTGAGGG...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTCCCAGGTTCTTTTCATaGCCAAATCTTCAGACATGG | + |
Preference number: 2 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCPRFFS*PNLQTW Trigger: CCATGTCTGAAGATTTGGGCATGAAAAGAACCTGGG...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATAAGGTCGCGAGGTGTTTaGAGCTTCAGATTCCAAAAT | + |
Preference number: 2 (lower is better) Translates to: PNKLAAFVKITENSMHEIRSRGV*SFRFQN Trigger: ATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCT...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR GCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCCTTTATTTTCATTTTTaGCCTCAGTGGGAAGTTGGT | + |
Preference number: 2 (lower is better) Translates to: RANINYKNSNCTFEMVYRLYFHF*PQWEVG Trigger: ACCAACTTCCCACTGAGGGCAAAAATGAAAATAAAG...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CCA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTCCAAATCTTCAGACATaGTCTATGAATGAGATCCCA | + |
Preference number: 2 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPPNLQT*SMNEIP Trigger: TGGGATCTCATTCATAGACCATGTCTGAAGATTTGG...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | CCAGAGTGCGAGGTGGGGGCTGGAGTTGTAGCTCAGTaGTGGGAAACCTGCCTAGCATGCAAGAGGCCCTGG | + |
Preference number: 3 (lower is better) Translates to: PECEVGAGVVAQ*WETCLACKRPW Trigger: CCAGGGCCTCTTGCATGCTAGGCAGGTTTCCCACCACTGAGCTACAACTCCAGCCCCCACCTCGCACTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | CGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTaGAGTTGTAGCTCAGTGGTGGGAAACCTGCCTAGC | + |
Preference number: 3 (lower is better) Translates to: RPMLGTRVRGGG*SCSSVVGNLPS Trigger: GCTAGGCAGGTTTCCCACCACTGAGCTACAACTCCAGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 72 bp | GTCCTTTTGTCTTCCAGGGAGTCTGCTTGTGGACCGTaGGGCCAGATCGGCCTGGGGACAGCATTTGTAGGG | + |
Preference number: 3 (lower is better) Translates to: VLLSSRESACGP*GQIGLGTAFVG Trigger: CCCTACAAATGCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | GTTCAGATCATGCGTCCTTTTGTCTTCCAGGGAGTCTaGTTGTGGACCGTGAGGCCAGATCGGCCTGGGGAC | + |
Preference number: 3 (lower is better) Translates to: VQIMRPFVFQGV*LWTVRPDRPGD Trigger: GTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | ATCATGCGTCCTTTTGTCTTCCAGGGAGTCTGCTTGTaGACCGTGAGGCCAGATCGGCCTGGGGACAGCATT | + |
Preference number: 3 (lower is better) Translates to: IMRPFVFQGVCL*TVRPDRPGDSI Trigger: AATGCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 72 bp | AGTCAGGGGTTCTCTGTGTATAGCCCTAGCAGTCCTTaGACTCTTTGTAGGAGCGGCCGGCCTCCAACTCAA | + |
Preference number: 3 (lower is better) Translates to: SQGFSVYSPSSP*TLCRSGRPPTQ Trigger: TTGAGTTGGAGGCCGGCCGCTCCTACAAAGAGTTCAAGGACTGCTAGGGCTATACACAGAGAACCCCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | CCAGATCGGCCTGGGGACAGCATTTGTAGGGAGGACTaGTGCTGCCCAGGTTTCAGGTTTTCTGAAACAAGA | + |
Preference number: 3 (lower is better) Translates to: PDRPGDSICRED*CCPGFRFSETR Trigger: TCTTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAGGCCGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | AGCATCGAAAGATCGAAAGTACTAAAATACGCCCAATaGTGGGAACCAGAGTGCGAGGTGGGGGCTGGAGTT | + |
Preference number: 3 (lower is better) Translates to: SIERSKVLKYAQ*WEPECEVGAGV Trigger: AACTCCAGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGATCTTTCGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | GAGATGGTCTACCGCTCCTTACCTCCTAAGTCTCTCTaGATAAGACCCTGGGATAGTTACAACACTACAGGC | + |
Preference number: 3 (lower is better) Translates to: EMVYRSLPPKSL*IRPWDSYNTTG Trigger: GCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCAGAGAGACTTAGGAGGTAAGGAGCGGTAGACCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | AGCTTTAACAAAGGGGCTCAACTCCTGTTCAGATCATaGGTCCTTTTGTCTTCCAGGGAGTCTGCTTGTGGA | + |
Preference number: 3 (lower is better) Translates to: SFNKGAQLLFRS*VLLSSRESACG Trigger: TCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCTGAACAGGAGTTGAGCCCCTTTGTTAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | TCTTTTGATGCCATAGCTTGGATATCAGAAGTCCAGTaGCCACGGACTTGGTACATCCTGTCTCCACCTTTG | + |
Preference number: 3 (lower is better) Translates to: SFDAIAWISEVQ*PRTWYILSPPL Trigger: CAAAGGTGGAGACAGGATGTACCAAGTCCGTGGCCACTGGACTTCTGATATCCAAGCTATGGCATCAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | CGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTaGGAGGGAGAGATCACCATAGAAACCTTGGCCACA | + |
Preference number: 3 (lower is better) Translates to: RCNECSLQCQCV*EGEITIETLAT Trigger: TGTGGCCAAGGTTTCTATGGTGATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CAA 90 bp | TGGATAAGACCCTGGGATAGTTACAACACTACAGGCTTTTTGGAAAACCCGAGAGAGGTCGCGAGGTGTTaGGAGCTTCAGATTCCAAAA | + |
Preference number: 3 (lower is better) Translates to: WIRPWDSYNTTGFLENPREVARC*ELQIPK Trigger: TTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC...TCTCGGGTTTTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 72 bp | TGTCTCCACCTTTGGTATGAACATAATACCAGCCACTaGGCATTTCCACGAAGGGCAAGTAAGGCTTGTCAG | + |
Preference number: 3 (lower is better) Translates to: CLHLWYEHNTSH*AFPRRASKACQ Trigger: CTGACAAGCCTTACTTGCCCTTCGTGGAAATGCTCAGTGGCTGGTATTATGTTCATACCAAAGGTGGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | ATCACCATAGAAACCTTGGCCACATGTTTCCCAGATTaGGCTGTCAGAGGGATTATACTCTGCCATCTCTTC | + |
Preference number: 3 (lower is better) Translates to: ITIETLATCFPD*AVRGIILCHLF Trigger: GAAGAGATGGCAGAGTATAATCCCTCTGACAGCCCAATCTGGGAAACATGTGGCCAAGGTTTCTATGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 72 bp | TGGGAAACCTGCCTAGCATGCAAGAGGCCCTGGGTCTaGTTTCTAGCATCACACACAAAAGTGTTATACATA | + |
Preference number: 3 (lower is better) Translates to: WETCLACKRPWV*FLASHTKVLYI Trigger: TATGTATAACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGGCAGGTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | ATCCAACCCACTTCAAAATATTCCCGCTGTAATGAATaGAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAG | + |
Preference number: 3 (lower is better) Translates to: IQPTSKYSRCNE*SLQCQCVWEGE Trigger: CTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGAATATTTTGAAGTGGGTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | TTTCCCAGGTTCTTTTCATGCCCAAATCTTCAGACATaGTCTATGAATGAGATCCCAAGAGGGAAGCACAGG | + |
Preference number: 3 (lower is better) Translates to: FPRFFSCPNLQT*SMNEIPRGKHR Trigger: CCTGTGCTTCCCTCTTGGGATCTCATTCATAGACCATGTCTGAAGATTTGGGCATGAAAAGAACCTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | CGCTCCTTACCTCCTAAGTCTCTCTGGATAAGACCCTaGGATAGTTACAACACTACAGGCTTTTTGGAAAAC | + |
Preference number: 3 (lower is better) Translates to: RSLPPKSLWIRP*DSYNTTGFLEN Trigger: GTTTTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCAGAGAGACTTAGGAGGTAAGGAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CCA 72 bp | CAATTGACTCAAGGTGACCTTGGCAAAAATCACCCTTaGTCTACGTTGTCAAAACTGCAGTTTCCAAACGCT | + |
Preference number: 3 (lower is better) Translates to: QLTQGDLGKNHP*STLSKLQFPNA Trigger: AGCGTTTGGAAACTGCAGTTTTGACAACGTAGACCAAGGGTGATTTTTGCCAAGGTCACCTTGAGTCAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CAA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTCTTCAGATTCCAAAATaGTGGTGTGAGCTCTGGACT | + |
Preference number: 3 (lower is better) Translates to: KRGDTLLAHIKENPTDQILQIPK*WCELWT Trigger: AGTCCAGAGCTCACACCACAATTTTGGAATCTGAAG...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CAA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCGGTTTGAAGAGTCAATaGACTCAAGGTGACCTTGGC | + |
Preference number: 3 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIGLKSQ*TQGDLG Trigger: GCCAAGGTCACCTTGAGTCAATTGACTCTTCAAACC...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR TCA 72 bp | TGTTCAGGGTTCCACCAACAACAGAGTGAAAATACATaGATAACATCACCATCTGTACTGAAGCCCAAACAT | + |
Preference number: 3 (lower is better) Translates to: CSGFHQQQSENT*ITSPSVLKPKH Trigger: ATGTTTGGGCTTCAGTACAGATGGTGATGTTATTCATGTATTTTCACTCTGTTGTTGGTGGAACCCTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR-3UTR CAA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCAGAAATCCCAAGGGTTaGAAGAGTCAATTGACTCAA | + |
Preference number: 3 (lower is better) Translates to: RANINYKNSNCTFEMVYRRNPKG*KSQLTQ Trigger: TTGAGTCAATTGACTCTTCAAACCCTTGGGATTTCT...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR GCA 72 bp | CTCAGCCTATTACAATGGTCCCTTTATTTTCATTTTTaGCCTCAGTGGGAAGTTGGTTATCTTATATCAAGG | + |
Preference number: 3 (lower is better) Translates to: LSLLQWSLYFHF*PQWEVGYLISR Trigger: CCTTGATATAAGATAACCAACTTCCCACTGAGGGCAAAAATGAAAATAAAGGGACCATTGTAATAGGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR-3UTR CAA 90 bp | TCACTTTATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGACATATGTAAGAGATTaGAGCATCCGTAGACTTTTG | + |
Preference number: 3 (lower is better) Translates to: SLYEISHFTRNSSSVHTVTYVRD*SIRRLL Trigger: CAAAAGTCTACGGATGCTCAAATCTCTTACATATGT...CACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATAAAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR TCA 72 bp | GTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTaGAATTACTGTTACCTTTTTGTTGGCAAAGATACA | + |
Preference number: 3 (lower is better) Translates to: VLHFVTGVNISC*NYCYLFVGKDT Trigger: TGTATCTTTGCCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCACCAGTCTCCCCCACAGTGAGGGCCTCACCCCATGCTTCACACCCTGCTGTACAGCGGCCCCTCCACTaGGCCGAACTGGGTGCGCTT | + |
Preference number: 4 (lower is better) Translates to: APVSPTVRASPHASHPAVQRPLH*AELGAL Trigger: AAGCGCACCCAGTTCGGCCCAGTGGAGGGGCCGCTG...TACAGCAGGGTGTGAAGCATGGGGTGAGGCCCTCACTGTGGGGGAGACTGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | TTTGTCTTCCAGGGAGTCTGCTTGTGGACCGTGAGGCCAGATCGGCCTGGGGACGCTACCTGGATGTGTTaGACCTGGATGGCGTGCTGC | + |
Preference number: 4 (lower is better) Translates to: FVFQGVCLWTVRPDRPGDATWMC*TWMACC Trigger: GCAGCACGCCATCCAGGTGCAACACATCCAGGTAGC...GTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 72 bp | CAGATCATGCGTCCTTTTGTCTTCCAGGGAGTCTGCTaGTGGACCGTGAGGCCAGATCGGCCTGGGGACAGC | + |
Preference number: 4 (lower is better) Translates to: QIMRPFVFQGVC*WTVRPDRPGDS Trigger: GCTGTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAAAGGACGCATGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCACGGGGCGGGTCAGGCTaGCAGTCATCAACATCTGTG | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPRGGSG*QSSTSV Trigger: CACAGATGTTGATGACTGGCAGCCTGACCCGCCCCG...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR TCA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTGGATATGGGAGGGGCTaGGCCCCTGCTGTACCTGCT | + |
Preference number: 4 (lower is better) Translates to: SKVLKYAQCWEPECEVGAGYGRG*APAVPA Trigger: AGCAGGTACAGCAGGGGCTCAGCCCCTCCCATATCC...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGCCCTGCTGTACCTGCTaGGCAGAGGGGCTCAATGGC | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRPCCTC*AEGLNG Trigger: GCCATTGAGCCCCTCTGCTCAGCAGGTACAGCAGGG...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATGAATGCCGGAGCATGTaGAGTCTCAGCTTGTCGGGG | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINECRSM*SLSLSG Trigger: CCCCGACAAGCTGAGACTGCACATGCTCCGGCATTC...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGGGGCTGAACCTGGACTaGTCCAGAGAGAGCAGAGGC | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRGLNLD*SRESRG Trigger: GCCTCTGCTCTCTCTGGAGCAGTCCAGGTTCAGCCC...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGCGGGGCGGGTCAGGCTaGCAGTCATCAACATCTGTG | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRRGGSG*QSSTSV Trigger: CACAGATGTTGATGACTGGCAGCCTGACCCGCCCCG...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCATGTTCTAGGTGGTTCTaGGCTGGGCGCACAAACATC | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPCSRWF*AGRTNI Trigger: GATGTTTGTGCGCCCAGCCCAGAACCACCTAGAACA...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATGCTCTCCTCTTGCTGTaGCTGCAGGTGCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINALLLL*LQVQGV Trigger: CACACCTTGCACCTGCAGCCACAGCAAGAGGAGAGC...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGGCTGTCAGAGTGGTCTaGGTAGGCACGAGGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRAVRVV*VGTRLS Trigger: GGAGAGCCTCGTGCCTACCCAGACCACTCTGACAGC...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATTGTGTAGTCTGCTGTTaGCTGGGGCCTGTGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINCVVCC*LGPVES Trigger: GGACTCCACAGGCCCCAGCCAACAGCAGACTACACA...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCATGTAAACAGAGTCTGTaGAGCTTCCACCGGGTGGAT | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPCKQSL*SFHRVD Trigger: ATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACA...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | AAGAAACTCTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACGGATGCAAGGGGCCATaGTTCGGGCACACGGAAGAA | + |
Preference number: 4 (lower is better) Translates to: KKLFLSTYSGMGTSATYHGCKGP*FGHTEE Trigger: TTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCC...GTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAGAGTTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGCTTGTGTGGAAGAACTaGCTTGGATATGGGAGGGGC | + |
Preference number: 4 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLLVWKN*LGYGRG Trigger: GCCCCTCCCATATCCAAGGCAGTTCTTCCACACAAG...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAACACATGCTGCTGGAGAGCCTaGCCTTGTGTGGAAGAACTG | + |
Preference number: 4 (lower is better) Translates to: GDTSPLDPQQIRLPNRNTCCWRA*PCVEEL Trigger: CAGTTCTTCCACACAAGGGCAGGCTCTCCAGCAGCA...TGTGTTCCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATGAGGAATTCTGCTGCTaGTGGAGAGCCTGCCCTTGT | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINEEFCC*WRACPC Trigger: ACAAGGGCAGGCTCTCCAGCAGCAGCAGAATTCCTC...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAGTGCACCTGTGCAGTaGTCTGTTCATGGTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLSAPVQ*SVHGLQ Trigger: CTGCAGACCATGAACAGAGCACTGCACAGGTGCACT...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATGCAGTGCTCTGTTCATaGTCTGCAGACGTTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINAVLCS*SADVGH Trigger: GTGGCCAACGTCTGCAGACCATGAACAGAGCACTGC...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCAGCACCTGTTGAGCTGTaGCATCCTGTTGGACATAAG | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPAPVEL*HPVGHK Trigger: CTTATGTCCAACAGGATGCCACAGCTCAACAGGTGC...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | TGTGAAGGGGAGGGAGGGATCCTGGAAGCAACAGGAAGGCTGAAGTCACTCAATGCTGGCAGGCAGCTGTaGATCCAGTTCTGTACCTTC | + |
Preference number: 4 (lower is better) Translates to: CEGEGGILEATGRLKSLNAGRQL*IQFCTF Trigger: GAAGGTACAGAACTGGATCCACAGCTGCCTGCCAGC...ATTGAGTGACTTCAGCCTTCCTGTTGCTTCCAGGATCCCTCCCTCCCCTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGGGCTGCCCAGCTACCTaGATGTGTTGCACCTGGATG | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWGCPAT*MCCTWM Trigger: CATCCAGGTGCAACACATCCAGGTAGCTGGGCAGCC...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAGCAGAGGGGCTCAATaGCTGCCCAGCTACCTGGAT | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRSRGAQ*LPSYLD Trigger: ATCCAGGTAGCTGGGCAGCCATTGAGCCCCTCTGCT...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTTCTGTGATCACAAACTaGCCTGGGGGCAGTGTCATC | + |
Preference number: 4 (lower is better) Translates to: SKVLKYAQCWEPECEVGASVITN*PGGSVI Trigger: GATGACACTGCCCCCAGGTCAGTTTGTGATCACAGA...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGCCACACCACTGTCTGTaGTCACAAACTGACCTGGGG | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWPHHCL*SQTDLG Trigger: CCCCAGGTCAGTTTGTGATCACAGACAGTGGTGTGG...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAACACAGCTCTGTTCATGGTCTaGAGACGTTGGCCACACATG | + |
Preference number: 4 (lower is better) Translates to: GDTSPLDPQQIRLPNRNTALFMV*RRWPHM Trigger: CATGTGTGGCCAACGTCTGCAGACCATGAACAGAGC...TGTGTTCCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCAAACAAAGTGCACCTGTaGAGTGCTCTGTTCATGGTC | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPNKVHL*SALFMV Trigger: GACCATGAACAGAGCACTGCACAGGTGCACTTTGTT...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | TGTGAAGGGGAGGGAGGGATCCTGGAAGCAACAGGAAGGCTGAAGTCACTCAATAGAGGGTCGGAACCATaGACACTCTCAATGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: CEGEGGILEATGRLKSLNRGSEP*TLSMEG Trigger: GCCTTCCATTGAGAGTGTGCATGGTTCCGACCCTCT...ATTGAGTGACTTCAGCCTTCCTGTTGCTTCCAGGATCCCTCCCTCCCCTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | TGTGAAGGGGAGGGAGGGATCCTGGAAGCAACAGGAAGGCTGAAGTCACTCAATCGAACTGGGTGCGCTTaGGAATCCGTCTTTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: CEGEGGILEATGRLKSLNRTGCA*ESVFWR Trigger: TCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCG...ATTGAGTGACTTCAGCCTTCCTGTTGCTTCCAGGATCCCTCCCTCCCCTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGAGGCGGGGTTTCCTGTaGCAGCTGAGGAATTGGGAT | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRRRGFL*QLRNWD Trigger: ATCCCAATTCCTCAGCTGCCACAGGAAACCCCGCCT...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTTTCCCCTCCCGCCCATaGAAGCGCAAGTGTTGGTCC | + |
Preference number: 4 (lower is better) Translates to: PSMQEALGLISSITHKSVFPSRP*KRKCWS Trigger: GGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAA...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTTCAGTGGTGTGTGGATaGTGTTGGGAAGCTGGGCAT | + |
Preference number: 4 (lower is better) Translates to: SKVLKYAQCWEPECEVGASVVCG*CWEAGH Trigger: ATGCCCAGCTTCCCAACACCATCCACACACCACTGA...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAAGAACTGCCTTGGATATaGGAGGGGCTGAGCCCCTGC | + |
Preference number: 4 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQELPWI*EGLSPC Trigger: GCAGGGGCTCAGCCCCTCCCATATCCAAGGCAGTTC...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCTGCAGGTGCAAGGTGTaGGTTTCTGGTTCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: SRCNECSLQCQCVWEGEICRCKV*VSGSCS Trigger: GGAGCAGGAACCAGAAACTCACACCTTGCACCTGCA...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | GCATCCGTAGACTTTTGTAACTGTGAAGGGGAGGGAGGGATCCTGGAAGCAACAGACGTTGGCCACACATaGGCGCTTTCATCTTTGGGA | + |
Preference number: 4 (lower is better) Translates to: ASVDFCNCEGEGGILEATDVGHT*ALSSLG Trigger: TCCCAAAGATGAAAGCGCTCATGTGTGGCCAACGTC...TGTTGCTTCCAGGATCCCTCCCTCCCCTTCACAGTTACAAAAGTCTACGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGGTAGGAGGCACCATCTaGTGTATACACCACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRVGGTI*CIHHLL Trigger: CAGCAGGTGGTGTATACAGCAGATGGTGCCTCCTAC...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCAGCACACGGAAGAATGTaGATTGTTACACTCCTCACA | + |
Preference number: 4 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPAHGRM*IVTLLT Trigger: TGTGAGGAGTGTAACAATGCACATTCTTCCGTGTGC...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGAGGCAGGCTCGCTCTTaGCCGGGTGAGCACAGGCCG | + |
Preference number: 4 (lower is better) Translates to: YEISHFTRNSSSVHTVAWRQARS*PGEHRP Trigger: CGGCCTGTGCTCACCCGGGCAAGAGCGAGCCTGCCT...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTAAGGCAGGCTCGCTCTTaGCCGGGTGAGCACAGGCCG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVRQARS*PGEHRP Trigger: CGGCCTGTGCTCACCCGGGCAAGAGCGAGCCTGCCT...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGGTCTTGCTGCTATACTaGTTGGAGCAGTGTGGGCAG | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRVLLLY*LEQCGQ Trigger: CTGCCCACACTGCTCCAAGCAGTATAGCAGCAAGAC...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGGTGTGTGGATGGTGTTaGGAAGCTGGGCATACTCTG | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWVCGWC*EAGHTL Trigger: CAGAGTATGCCCAGCTTCCCAACACCATCCACACAC...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATTACAAAAACTCCAACTGTCTGCTGAGACTGATGTaGGGAAGTGGCCGGAGCCAC | + |
Preference number: 4 (lower is better) Translates to: TPTPSSSRANINYKNSNCLLRLM*GSGRSH Trigger: GTGGCTCCGGCCACTTCCCCACATCAGTCTCAGCAG...ACAGTTGGAGTTTTTGTAATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGATGGTCTGCAGACGTTaGCCACACATGAGCGCTTTC | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWMVCRR*PHMSAF Trigger: GAAAGCGCTCATGTGTGGCCAACGTCTGCAGACCAT...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCGACGTTGGCCACACATaGGCGCTTTCATCTTTGGGA | + |
Preference number: 4 (lower is better) Translates to: SRCNECSLQCQCVWEGEIDVGHT*ALSSLG Trigger: TCCCAAAGATGAAAGCGCTCATGTGTGGCCAACGTC...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GCGGGATTAAAGGTGTGCACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATCCATCTTGGTCTTGCTaGTATACTGCTTGGAGCAGT | + |
Preference number: 4 (lower is better) Translates to: AGLKVCTPTPSSSRANINPSWSC*YTAWSS Trigger: ACTGCTCCAAGCAGTATAGCAGCAAGACCAAGATGG...ATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGTGCACACCTTTAATCCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGGCACCATCTTGGTCTTaGTGCTATACTGCTTGGAGC | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWAPSWS*CYTAWS Trigger: GCTCCAAGCAGTATAGCAGCAAGACCAAGATGGTGC...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGACAGCGGCCCCTCCACTaGGCCGAACTGGGTGCGCTT | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRQRPLH*AELGAL Trigger: AAGCGCACCCAGTTCGGCCCAGTGGAGGGGCCGCTG...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAAAAGGGCGACACCTCCCCACTAGATCCACAGCAAATACGACTCCCAAACAGGCAAGGTGTGAGTTTCTaGTTCCTGCTCCAGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: KKGDTSPLDPQQIRLPNRQGVSF*FLLQRR Trigger: CCTTCTCTGGAGCAGGAACCAGAAACTCACACCTTG...CCTGTTTGGGAGTCGTATTTGCTGTGGATCTAGTGGGGAGGTGTCGCCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCTCCCTCTCGGGGTTATaGATCCTTTGCATGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: SRCNECSLQCQCVWEGEISLSGL*ILCMCS Trigger: AGAGCACATGCAAAGGATGCATAACCCCGAGAGGGA...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GCATCCGTAGACTTTTGTAACTGTGAAGGGGAGGGAGGGATCCTGGAAGCAACATGTACCTTCAGTTCCTaGTTGGGCTCCACGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: ASVDFCNCEGEGGILEATCTFSS*LGSTFF Trigger: AAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTACA...TGTTGCTTCCAGGATCCCTCCCTCCCCTTCACAGTTACAAAAGTCTACGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | AAGAAACTCTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACATAAGCTACCTGGGCTaGGTCTGTAAACAGAGTCTG | + |
Preference number: 4 (lower is better) Translates to: KKLFLSTYSGMGTSATYHISYLG*VCKQSL Trigger: CAGACTCTGTTTACAGACCCAGCCCAGGTAGCTTAT...GTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAGAGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | ATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGGTCCACTGGGCCGAACTaGGTGCGCTTGGGAATCCGT | + |
Preference number: 4 (lower is better) Translates to: MKSPISQETLPQYIQWHGSTGPN*VRLGIR Trigger: ACGGATTCCCAAGCGCACCCAGTTCGGCCCAGTGGA...CCCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | GCATCCGTAGACTTTTGTAACTGTGAAGGGGAGGGAGGGATCCTGGAAGCAACACCTTCAGTTCCTGCTTaGGCTCCACGTTCTTTATTG | + |
Preference number: 4 (lower is better) Translates to: ASVDFCNCEGEGGILEATPSVPA*APRSLL Trigger: CAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGG...TGTTGCTTCCAGGATCCCTCCCTCCCCTTCACAGTTACAAAAGTCTACGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTTGCTGCTATACTGCTTaGAGCAGTGTGGGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: PSMQEALGLISSITHKSVCCYTA*SSVGSR Trigger: TCTGCTGCCCACACTGCTCCAAGCAGTATAGCAGCA...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAATGTGTTGCACCTGGATaGCGTGCTGCGTGTAAGTCT | + |
Preference number: 4 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQCVAPG*RAACKS Trigger: AGACTTACACGCAGCACGCCATCCAGGTGCAACACA...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | CTCCATCTAGAAGTTAACTTTCCCCTGAAAGAGCTGCATTCCATGGCAGAAATCGTTTCCTGTGGCAGCTaGGGAATTGGGATGGACGCT | + |
Preference number: 4 (lower is better) Translates to: LHLEVNFPLKELHSMAEIVSCGS*GIGMDA Trigger: AGCGTCCATCCCAATTCCTCAGCTGCCACAGGAAAC...GATTTCTGCCATGGAATGCAGCTCTTTCAGGGGAAAGTTAACTTCTAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTACTGTGTGCAGAGGGCTaGACCTGGACTGCTCCAGAG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVLCAEG*TWTAPE Trigger: CTCTGGAGCAGTCCAGGTTCAGCCCTCTGCACACAG...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | ATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGGGAAGGCAGCACCTGTTaGGCTGTGGCATCCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: MKSPISQETLPQYIQWHGEGSTC*AVASCW Trigger: CCAACAGGATGCCACAGCTCAACAGGTGCTGCCTTC...CCCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAATGTAAACAGAGTCTGTaGAGCTTCCACCGGGTGGAT | + |
Preference number: 4 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQCKQSL*SFHRVD Trigger: ATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACA...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTTCAGAATGTGGGCTTTaGGCTTGCTGGCGCTCTTAT | + |
Preference number: 4 (lower is better) Translates to: PSMQEALGLISSITHKSVSECGL*ACWRSY Trigger: ATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGA...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTTTCTTTCGAATGTGTTaGACCATCTTGGTCTTGCTG | + |
Preference number: 4 (lower is better) Translates to: SKVLKYAQCWEPECEVGAFFRMC*TILVLL Trigger: CAGCAAGACCAAGATGGTGCAACACATTCGAAAGAA...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTCCATCTAGAAGTTAACTTTCCCCTGAAAGAGCTGCATTCCATGGCAGAAATCACTGCTTCCCGCAGGTaGAACACAGGAAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: LHLEVNFPLKELHSMAEITASRR*NTGSPC Trigger: GCAAGGACTTCCTGTGTTCCACCTGCGGGAAGCAGT...GATTTCTGCCATGGAATGCAGCTCTTTCAGGGGAAAGTTAACTTCTAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCGGGCTTTGCGCTTGCTaGCGCTCTTATAAACCTTAT | + |
Preference number: 4 (lower is better) Translates to: SRCNECSLQCQCVWEGEIGLCAC*RSYKPY Trigger: ATAAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCC...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | AGAAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAACTGCTGCAGCTGCTCTaGGCTGATAAACCGCCGATT | + |
Preference number: 4 (lower is better) Translates to: RRGEIPCWLTLKRIQQIKLLQLL*ADKPPI Trigger: AATCGGCGGTTTATCAGCTCAGAGCAGCTGCAGCAG...TTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | GAGGACATGCATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTGTAGGAGGCACCATCTaGTGTATACACCACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: EDMHGLYAYTYVRDLSIRVGGTI*CIHHLL Trigger: CAGCAGGTGGTGTATACAGCAGATGGTGCCTCCTAC...ACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATGCATGTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTGGCCAGTTCTTCTCTTaGTCTCGAAGAACTTTCCTC | + |
Preference number: 4 (lower is better) Translates to: PSMQEALGLISSITHKSVGQFFS*SRRTFL Trigger: GAGGAAAGTTCTTCGAGAGCAAGAGAAGAACTGGCC...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGGAGGTTCTGTTCTAGGTaGTTCTGGGCTGGGCGCACA | + |
Preference number: 4 (lower is better) Translates to: MKSPISQETLPQYIQWHGRFCSR*FWAGRT Trigger: TGTGCGCCCAGCCCAGAACCACCTAGAACAGAACCT...CCCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR TCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTCAGCTGGGGTGGCGCTaGTCACAGCTGTCGTCAGTG | + |
Preference number: 4 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCQLGWR*SQLSSV Trigger: CACTGACGACAGCTGTGATCAGCGCCACCCCAGCTG...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTCAGAGTAGCTGGTTCTaGCTCATCAAACTGTTCCTT | + |
Preference number: 4 (lower is better) Translates to: PSMQEALGLISSITHKSVQSSWF*LIKLFL Trigger: AAGGAACAGTTTGATGAGGCAGAACCAGCTACTCTG...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCAGTGATTTACCAGCATaGCTCGCCGCCGGAAGCCCA | + |
Preference number: 4 (lower is better) Translates to: RANINYKNSNCTFEMVYRSDLPA*LAAGSP Trigger: TGGGCTTCCGGCGGCGAGGCATGCTGGTAAATCACT...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGACAGGGAGTCACTGTGTaGAGAGGGCTGAACCTGGAC | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRQGVTV*RGLNLD Trigger: GTCCAGGTTCAGCCCTCTGCACACAGTGACTCCCTG...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTCAAACGGATAAATTTTaGAGGACGCCCGGGTCGCCG | + |
Preference number: 4 (lower is better) Translates to: KRGDTLLAHIKENPTDQIQTDKF*RTPGSP Trigger: CGGCGACCCGGGCGTCCTCCAAAATTTATCCGTTTG...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGCACCTGGATAAAATCTaGGAACCGTTTCTTACAAGT | + |
Preference number: 4 (lower is better) Translates to: EVARCLELQIPKLWCELWHLDKI*EPFLTS Trigger: ACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTG...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTATGCGGTCAGCTTTCTTaGCCTCCCTCTCGGGGTTAT | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVCGQLS*PPSRGY Trigger: ATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCA...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTCGGGAGCTCAGCTCCTaGGTGGTTCTTCAGAATGTG | + |
Preference number: 4 (lower is better) Translates to: KRGDTLLAHIKENPTDQIRELSS*VVLQNV Trigger: CACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCG...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGACAGGAGGGGTGGCAATaGTACCCGTCAGCTGAGTGT | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRQEGWQ*YPSAEC Trigger: ACACTCAGCTGACGGGTACCATTGCCACCCCTCCTG...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTAGACTTTTGGCAGTGCTCTGTTCATaGTCTGCAGACGTTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: HGLYAYTYVRDLSIRRLLAVLCS*SADVGH Trigger: GTGGCCAACGTCTGCAGACCATGAACAGAGCACTGC...CAAAAGTCTACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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3UTR CAA 72 bp | CATAGCTTGGATATCAGAAGTCCAGTGGCCACGGACTaGGTACATCCTGTCTCCACCTTTGGTATGAACATA | + |
Preference number: 4 (lower is better) Translates to: HSLDIRSPVATD*VHPVSTFGMNI Trigger: TATGTTCATACCAAAGGTGGAGACAGGATGTACCAAGTCCGTGGCCACTGGACTTCTGATATCCAAGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 72 bp | GATCACCATAGAAACCTTGGCCACATGTTTCCCAGATaGGGCTGTCAGAGGGATTATACTCTGCCATCTCTT | + |
Preference number: 4 (lower is better) Translates to: DHHRNLGHMFPR*GCQRDYTLPSL Trigger: AAGAGATGGCAGAGTATAATCCCTCTGACAGCCCAATCTGGGAAACATGTGGCCAAGGTTTCTATGGTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAATGGTACCCGTCAGCTaGGTGTGGGTGCTCAGCATA | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRMVPVS*VWVLSI Trigger: TATGCTGAGCACCCACACTCAGCTGACGGGTACCAT...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTATGCAACTGTATGTGCTaGGGCTGCTGCAGACCAGAT | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVCNCMC*GCCRPD Trigger: ATCTGGTCTGCAGCAGCCTCAGCACATACAGTTGCA...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTACGAGGCTCTCCTCTTaGTGTGGCTGCAGGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPTRLSS*CGCRCK Trigger: CTTGCACCTGCAGCCACAGCAAGAGGAGAGCCTCGT...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCAACACAGGAAGTCCTTaGGGTCGGAATGCCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: RANINYKNSNCTFEMVYRNTGSP*GRNAGA Trigger: TGCTCCGGCATTCCGACCGCAAGGACTTCCTGTGTT...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AGAAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATGTGGGCTTTGCGCTTaGTGGCGCTCTTATAAACCT | + |
Preference number: 4 (lower is better) Translates to: RRGEIPCWLTLKRIQQIKCGLCA*WRSYKP Trigger: AGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACA...TTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTAGACTTTTGGCTCTGTTCATGGTCTaGAGACGTTGGCCACACATG | + |
Preference number: 4 (lower is better) Translates to: HGLYAYTYVRDLSIRRLLALFMV*RRWPHM Trigger: CATGTGTGGCCAACGTCTGCAGACCATGAACAGAGC...CAAAAGTCTACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | TGGATAAGACCCTGGGATAGTTACAACACTACAGGCTTTTTGGAAAACCCGAGAAACAAAGTGCACCTGTaGAGTGCTCTGTTCATGGTC | + |
Preference number: 4 (lower is better) Translates to: WIRPWDSYNTTGFLENPRNKVHL*SALFMV Trigger: GACCATGAACAGAGCACTGCACAGGTGCACTTTGTT...TCTCGGGTTTTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTCGAACTGGGTGCGCTTaGGAATCCGTCTTTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: KRGDTLLAHIKENPTDQIRTGCA*ESVFWR Trigger: TCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCG...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTATGTTCTAGGTGGTTCTaGGCTGGGCGCACAAACATC | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVCSRWF*AGRTNI Trigger: GATGTTTGTGCGCCCAGCCCAGAACCACCTAGAACA...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCAGGTTCTGTTCTAGGTaGTTCTGGGCTGGGCGCACA | + |
Preference number: 4 (lower is better) Translates to: RANINYKNSNCTFEMVYRRFCSR*FWAGRT Trigger: TGTGCGCCCAGCCCAGAACCACCTAGAACAGAACCT...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTATGGCAGCTGAGGAATTaGGATGGACGCTTGTTCTGG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVWQLRN*DGRLFW Trigger: CCAGAACAAGCGTCCATCCCAATTCCTCAGCTGCCA...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTCCATCTAGAAGTTAACTTTCCCCTGAAAGAGCTGCATTCCATGGCAGAAATCTGGAAGCGCAAGTGTTaGTCCAGTTTGTCCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: LHLEVNFPLKELHSMAEIWKRKC*SSLSFS Trigger: GGAAAAGGACAAACTGGACCAACACTTGCGCTTCCA...GATTTCTGCCATGGAATGCAGCTCTTTCAGGGGAAAGTTAACTTCTAGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTTGGTTCTTCAGAATGTaGGCTTTGCGCTTGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: KRGDTLLAHIKENPTDQIWFFRM*ALRLLA Trigger: CGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCA...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTATCACACAAACAACTGCTCCTCTCAGAACTAACTGCATTAATATTCCTTCACGTGGAAGAACTGCCTTaGATATGGGAGGGGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: LSHKQLLLSELTALIFLHVEELP*IWEGLS Trigger: GCTCAGCCCCTCCCATATCCAAGGCAGTTCTTCCAC...GTGAAGGAATATTAATGCAGTTAGTTCTGAGAGGAGCAGTTGTTTGTGTGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAGAATTCTGCTGCTGCTaGAGAGCCTGCCCTTGTGTG | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLREFCCC*RACPCV Trigger: CACACAAGGGCAGGCTCTCCAGCAGCAGCAGAATTC...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATTACAAAAACTCCAACTGTAGGAGTTCCAAGCATTaGGGAGGTATGTGTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: TPTPSSSRANINYKNSNCRSSKH*GGMCVV Trigger: TACAACACACATACCTCCCCAATGCTTGGAACTCCT...ACAGTTGGAGTTTTTGTAATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCGTTGGCTGGGGCCTGTaGAGTCCAGGGAGTCACTGT | + |
Preference number: 4 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIVGWGL*SPGSHC Trigger: ACAGTGACTCCCTGGACTCCACAGGCCCCAGCCAAC...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GAGGACATGCATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTCTTTTGCATCTAGTCTaGCAATGGGGTTCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: EDMHGLYAYTYVRDLSIRLLHLV*QWGSAE Trigger: CTCTGCAGAACCCCATTGCCAGACTAGATGCAAAAG...ACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATGCATGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR TCA 90 bp | AGAAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAAGACGCTTGTTCTGGCTaGTCTAGTCCATTCAGAGTA | + |
Preference number: 4 (lower is better) Translates to: RRGEIPCWLTLKRIQQIKDACSG*SSPFRV Trigger: TACTCTGAATGGACTAGATCAGCCAGAACAAGCGTC...TTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATAGGATGCAAGGGGCCATaGTTCGGGCACACGGAAGAA | + |
Preference number: 4 (lower is better) Translates to: PNKLAAFVKITENSMHEIGCKGP*FGHTEE Trigger: TTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCC...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAATGGAAACTTCGCACGTaGTTTTTCACCTGGATAAAA | + |
Preference number: 4 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQWKLRT*FFTWIK Trigger: TTTTATCCAGGTGAAAAAGCACGTGCGAAGTTTCCA...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCTCCTTGCGGTCGGAATaGCGGAGCATGTGCAGTCTC | + |
Preference number: 4 (lower is better) Translates to: LLKLLKTQCMRYSGPDLISLRSE*RSMCSL Trigger: GAGACTGCACATGCTCCGGCATTCCGACCGCAAGGA...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAATGTACTGTGTAGTCTaGTGTTGGCTGGGGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRMYCVV*CWLGPV Trigger: CACAGGCCCCAGCCAACAGCAGACTACACAGTACAT...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | ATCACCATCTGTACTGAAGCCCAAACATTAGGCATGATGACTATTTACATAGCAAGTGCACCTGTGCAGTaGTCTGTTCATGGTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: ITICTEAQTLGMMTIYIASAPVQ*SVHGLQ Trigger: CTGCAGACCATGAACAGAGCACTGCACAGGTGCACT...TGCTATGTAAATAGTCATCATGCCTAATGTTTGGGCTTCAGTACAGATGGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTCATTTCGGATGCGTTTaGCCCTGCGCATGTCATCGG | + |
Preference number: 4 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPHFGCV*PCACHR Trigger: CCGATGACATGCGCAGGGCCAAACGCATCCGAAATG...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTGAGTGCAGCTTCATGTaGCTCTCCAAGGAGGCGCTG | + |
Preference number: 4 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCECSFM*LSKEAL Trigger: CAGCGCCTCCTTGGAGAGCCACATGAAGCTGCACTC...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTTTATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCAATGGTCTGCAGACGTTaGCCACACATGAGCGCTTTC | + |
Preference number: 4 (lower is better) Translates to: LYEISHFTRNSSSVHTVAMVCRR*PHMSAF Trigger: GAAAGCGCTCATGTGTGGCCAACGTCTGCAGACCAT...TGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CCA 90 bp | CATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTAGACTTTTGCATGCACACTCTCAATaGAAGGCAGCACCTGTTGAG | + |
Preference number: 4 (lower is better) Translates to: HGLYAYTYVRDLSIRRLLHAHSQ*KAAPVE Trigger: CTCAACAGGTGCTGCCTTCCATTGAGAGTGTGCATG...CAAAAGTCTACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR TCA 90 bp | CTATCACACAAACAACTGCTCCTCTCAGAACTAACTGCATTAATATTCCTTCACAGTTCTGTCATCGCCTaGGTTAGCAGGTCTGTTGTC | + |
Preference number: 4 (lower is better) Translates to: LSHKQLLLSELTALIFLHSSVIA*VSRSVV Trigger: GACAACAGACCTGCTAACTCAGGCGATGACAGAACT...GTGAAGGAATATTAATGCAGTTAGTTCTGAGAGGAGCAGTTGTTTGTGTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR TCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGACTGCAGACCAGATGCTaGCTGAGACACAGGGATATA | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRLQTRC*LRHRDI Trigger: TATATCCCTGTGTCTCAGTCAGCATCTGGTCTGCAG...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATAGTCTTCTGGTCCGAGTaGAGCTTCATGTGGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: PNKLAAFVKITENSMHEIVFWSE*SFMWLS Trigger: GGAGAGCCACATGAAGCTGCACTCGGACCAGAAGAC...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTAGGGTTATGCATCCTTTaGATGTGCTCTCGGAGTTTG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVGLCIL*MCSRSL Trigger: CAAACTCCGAGAGCACATGCAAAGGATGCATAACCC...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTACCTTCAGTTCCTGCTTaGGCTCCACGTTCTTTATTG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVPSVPA*APRSLL Trigger: CAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGG...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TGGATAAGACCCTGGGATAGTTACAACACTACAGGCTTTTTGGAAAACCCGAGAACGTGCTTTTTCACCTaGATAAAATCTGGGAACCGT | + |
Preference number: 4 (lower is better) Translates to: WIRPWDSYNTTGFLENPRTCFFT*IKSGNR Trigger: ACGGTTCCCAGATTTTATCCAGGTGAAAAAGCACGT...TCTCGGGTTTTCCAAAAAGCCTGTAGTGTTGTAACTATCCCAGGGTCTTATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCGTCGTCAGTGGTGTGTaGATGGTGTTGGGAAGCTGG | + |
Preference number: 4 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIVVSGV*MVLGSW Trigger: CCAGCTTCCCAACACCATCCACACACCACTGACGAC...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAGTCACTGCTTTCACTTaGCCAGAAGTAACAGGGGTT | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRVTAFT*PEVTGV Trigger: AACCCCTGTTACTTCTGGGCAAGTGAAAGCAGTGAC...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CTATCACACAAACAACTGCTCCTCTCAGAACTAACTGCATTAATATTCCTTCACTGTGGATGTGATCCGTaGTTTGAAGGTCTTGGAACG | + |
Preference number: 4 (lower is better) Translates to: LSHKQLLLSELTALIFLHCGCDP*FEGLGT Trigger: CGTTCCAAGACCTTCAAACCACGGATCACATCCACA...GTGAAGGAATATTAATGCAGTTAGTTCTGAGAGGAGCAGTTGTTTGTGTGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTAGCTCAGCTCCTGGGTaGTTCTTCAGAATGTGGGCT | + |
Preference number: 4 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCSSAPG*FFRMWA Trigger: AGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCT...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGACCACAGTCTCTCCAGTaGCACTATCTGTCGTTAAGA | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRPQSLQ*HYLSLR Trigger: TCTTAACGACAGATAGTGCCACTGGAGAGACTGTGG...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAGGTTCTGTTGAGCTGTaGCATCCTGTTGGACATAAG | + |
Preference number: 4 (lower is better) Translates to: MGQLQLLIRYFLALHLLRGSVEL*HPVGHK Trigger: CTTATGTCCAACAGGATGCCACAGCTCAACAGAACC...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTACTTTTGCATCTAGTCTaGCAATGGGGTTCTGTTGAG | + |
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVLLHLV*QWGSVE Trigger: CTCAACAGAACCCCATTGCCAGACTAGATGCAAAAG...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTAACCACAGGTCTTCATaGAAATCCCTGTCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: KRGDTLLAHIKENPTDQINHRSS*KSLSFL Trigger: CAGAAAAGACAGGGATTTGCATGAAGACCTGTGGTT...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCCACACCTTCAGTTCCTaGTTGGGCTCCACGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIHTFSS*LGSTFF Trigger: AAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGTG...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTATCACACAAACAACTGCTCCTCTCAGAACTAACTGCATTAATATTCCTTCACGAATTAAGATGCTGCTaGAGCTGCTCTGAGCTGATA | + |
Preference number: 4 (lower is better) Translates to: LSHKQLLLSELTALIFLHELRCC*SCSELI Trigger: TATCAGCTCAGAGCAGCTGCAGCAGCATCTTAATTC...GTGAAGGAATATTAATGCAGTTAGTTCTGAGAGGAGCAGTTGTTTGTGTGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR GCA 90 bp | CTTTATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCAAACCACAGGTCTTCATaGAAATCCCTGTCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: LYEISHFTRNSSSVHTVANHRSS*KSLSFL Trigger: CAGAAAAGACAGGGATTTGCATGAAGACCTGTGGTT...TGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR GCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTTCCTTTGTAGGGAAATaGAGCAAGTCCTGTGTTCCG | + |
Preference number: 4 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCSFVGK*SKSCVP Trigger: CGGAACACAGGACTTGCTGCATTTCCCTACAAAGGA...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATAATAAGCTACCTGGGCTaGGTCTGTAAACAGAGTCTG | + |
Preference number: 4 (lower is better) Translates to: PNKLAAFVKITENSMHEIISYLG*VCKQSL Trigger: CAGACTCTGTTTACAGACCCAGCCCAGGTAGCTTAT...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CCA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTAAGCTGGGCATACTCTaGGTGTTTCTTTCGAATGTG | + |
Preference number: 4 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCKLGIL*VFLSNV Trigger: CACATTCGAAAGAAACACCCAGAGTATGCCCAGCTT...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 72 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTaGAAATTACTGTTACCTTTTTGTTGGCAAAGATAC | + |
Preference number: 4 (lower is better) Translates to: SLAFRDWSQHFM*KLLLPFCWQRY Trigger: GTATCTTTGCCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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3UTR CAA 72 bp | GAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTaGTTGGCAAAGATACAGAGTCCATTTTCAGTTTCC | + |
Preference number: 4 (lower is better) Translates to: ESTFHVEITVTF*LAKIQSPFSVS Trigger: GGAAACTGAAAATGGACTCTGTATCTTTGCCAACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 90 bp | GCCCAGCTACCTGGGATGCTGACGGAGCCGCAGGGGCGGGCTCTGTaGCCTGGATGTGTTGCACCTGGATGGCGTGCTGCGTGTAAGTCT | + |
Preference number: 5 (lower is better) Translates to: AQLPGMLTEPQGRAL*PGCVAPGWRAACKS Trigger: AGACTTACACGCAGCACGCCATCCAGGTGCAACACATCCAGGTCACAGAGCCCGCCCCTGCGGCTCCGTCAGCATCCCAGGTAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS TCA 90 bp | CAGTGTGGGCAGCAGACAGGAGGGGTGGCAATGGTACCCGTCAGCTaGGTGTGGGTGCTCAGCATAGGGTCAGGCTCTCCAGGGCCAGCA | + |
Preference number: 5 (lower is better) Translates to: QCGQQTGGVAMVPVS*VWVLSIGSGSPGPA Trigger: TGCTGGCCCTGGAGAGCCTGACCCTATGCTGAGCACCCACACTCAGCTGACGGGTACCATTGCCACCCCTCCTGTCTGCTGCCCACACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | TCCGAGGAACCTATCTATGTAGAGGACCAGAGGCAGGCTCGCTCTTaGCCGGGTGAGCACAGGCCGGTTAGGGATGGGATGCAAGGGGCC | + |
Preference number: 5 (lower is better) Translates to: SEEPIYVEDQRQARS*PGEHRPVRDGMQGA Trigger: GGCCCCTTGCATCCCATCCCTAACCGGCCTGTGCTCACCCGGGCAAGAGCGAGCCTGCCTCTGGTCCTCTACATAGATAGGTTCCTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | CGGATGCGTTTGGCCCTGCGCATGTCATCGGCTGTCAGAGTGGTCTaGGTAGGCACGAGGCTCTCCTCTTGCTGTGGCTGCAGGTGCAAG | + |
Preference number: 5 (lower is better) Translates to: RMRLALRMSSAVRVV*VGTRLSSCCGCRCK Trigger: CTTGCACCTGCAGCCACAGCAAGAGGAGAGCCTCGTGCCTACCCAGACCACTCTGACAGCCGATGACATGCGCAGGGCCAAACGCATCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | AACTGCTTCCCGCAGGTGGAACACAGGAAGTCCTTGCGGTCGGAATaGCGGAGCATGTGCAGTCTCAGCTTGTCGGGGCGACAGAAGGCC | + |
Preference number: 5 (lower is better) Translates to: NCFPQVEHRKSLRSE*RSMCSLSLSGRQKA Trigger: GGCCTTCTGTCGCCCCGACAAGCTGAGACTGCACATGCTCCGGCATTCCGACCGCAAGGACTTCCTGTGTTCCACCTGCGGGAAGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 90 bp | GTAGGCACGAGGCTCTCCTCTTGCTGTGGCTGCAGGTGCAAGGTGTaGGTTTCTGGTTCCTGCTCCAGAGAAGGCGGGGTTTCCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: VGTRLSSCCGCRCKV*VSGSCSREGGVSCG Trigger: GCCACAGGAAACCCCGCCTTCTCTGGAGCAGGAACCAGAAACTCACACCTTGCACCTGCAGCCACAGCAAGAGGAGAGCCTCGTGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | GCCCGGGTGAGCACAGGCCGGTTAGGGATGGGATGCAAGGGGCCATaGTTCGGGCACACGGAAGAATGTGCATTGTTACACTCCTCACAC | + |
Preference number: 5 (lower is better) Translates to: ARVSTGRLGMGCKGP*FGHTEECALLHSSH Trigger: GTGTGAGGAGTGTAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCCCATCCCTAACCGGCCTGTGCTCACCCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | AGGCTCGCTCTTGCCCGGGTGAGCACAGGCCGGTTAGGGATGGGATaGAAGGGGCCATGCTTCGGGCACACGGAAGAATGTGCATTGTTA | + |
Preference number: 5 (lower is better) Translates to: RLALARVSTGRLGMG*KGPCFGHTEECALL Trigger: TAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCCCATCCCTAACCGGCCTGTGCTCACCCGGGCAAGAGCGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | GAGGCTCTCCTCTTGCTGTGGCTGCAGGTGCAAGGTGTGAGTTTCTaGTTCCTGCTCCAGAGAAGGCGGGGTTTCCTGTGGCAGCTGAGG | + |
Preference number: 5 (lower is better) Translates to: EALLLLWLQVQGVSF*FLLQRRRGFLWQLR Trigger: CCTCAGCTGCCACAGGAAACCCCGCCTTCTCTGGAGCAGGAACCAGAAACTCACACCTTGCACCTGCAGCCACAGCAAGAGGAGAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | CAGGTCAACGGGCAGTTCCCCTCCCGCCCATGGAAGCGCAAGTGTTaGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCACACTGCAGA | + |
Preference number: 5 (lower is better) Translates to: QVNGQFPSRPWKRKC*SSLSFSRKAFPHCR Trigger: TCTGCAGTGTGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCCGTTGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | GTCGTGCAGCTGGCCAACGTCCACTGTGGACTGCTGAGACTGATGTaGGGAAGTGGCCGGAGCCACCTGCACCACTTGCAACTGTATGTG | + |
Preference number: 5 (lower is better) Translates to: VVQLANVHCGLLRLM*GSGRSHLHHLQLYV Trigger: CACATACAGTTGCAAGTGGTGCAGGTGGCTCCGGCCACTTCCCCACATCAGTCTCAGCAGTCCACAGTGGACGTTGGCCAGCTGCACGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | TTTGTCTTCCAGGGAGTCTGCTTGTGGACCGTGAGGCCAGATCGGCCTGGGGACGGGCGACAGAAGGCCTaGTCACACTCTGTACACTGG | + |
Preference number: 5 (lower is better) Translates to: FVFQGVCLWTVRPDRPGDGRQKA*SHSVHW Trigger: CCAGTGTACAGAGTGTGACAAGGCCTTCTGTCGCCC...GTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 90 bp | TTCCACCGGGTGGATGTAGACCAGTGTGTGCTCTGGACCGTCCACTaGCGTGTAGGAGGCACCATCTGCTGTATACACCACCTGCTGGGG | + |
Preference number: 5 (lower is better) Translates to: FHRVDVDQCVLWTVH*RVGGTICCIHHLLG Trigger: CCCCAGCAGGTGGTGTATACAGCAGATGGTGCCTCCTACACGTCAGTGGACGGTCCAGAGCACACACTGGTCTACATCCACCCGGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | CAGGTGGAACACAGGAAGTCCTTGCGGTCGGAATGCCGGAGCATGTaGAGTCTCAGCTTGTCGGGGCGACAGAAGGCCTTGTCACACTCT | + |
Preference number: 5 (lower is better) Translates to: QVEHRKSLRSECRSM*SLSLSGRQKALSHS Trigger: AGAGTGTGACAAGGCCTTCTGTCGCCCCGACAAGCTGAGACTGCACATGCTCCGGCATTCCGACCGCAAGGACTTCCTGTGTTCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | GCCAGCAGGACGCAGTTTCCGAATACTTGGCGGGAGCTCAGCTCCTaGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCTGGCGCTCTT | + |
Preference number: 5 (lower is better) Translates to: ASRTQFPNTWRELSS*VVLQNVGFALAGAL Trigger: AAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACTGCGTCCTGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | AGGGTCAGGCTCTCCAGGGCCAGCAGGACGCAGTTTCCGAATACTTaGCGGGAGCTCAGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTT | + |
Preference number: 5 (lower is better) Translates to: RVRLSRASRTQFPNT*RELSSWVVLQNVGF Trigger: AAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACTGCGTCCTGCTGGCCCTGGAGAGCCTGACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | TTTGTCTTCCAGGGAGTCTGCTTGTGGACCGTGAGGCCAGATCGGCCTGGGGACCATGGTCTGCAGACGTaGGCCACACATGAGCGCTTT | + |
Preference number: 5 (lower is better) Translates to: FVFQGVCLWTVRPDRPGDHGLQT*ATHERF Trigger: AAAGCGCTCATGTGTGGCCAACGTCTGCAGACCATG...GTCCCCAGGCCGATCTGGCCTCACGGTCCACAAGCAGACTCCCTGGAAGACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS GCA 90 bp | CCCCCGTTGCCATTGGTGGTGGTTGTGATGATGTACTGTGTAGTCTaGTGTTGGCTGGGGCCTGTGGAGTCCAGGGAGTCACTGTGTGCA | + |
Preference number: 5 (lower is better) Translates to: PPLPLVVVVMMYCVV*CWLGPVESRESLCA Trigger: TGCACACAGTGACTCCCTGGACTCCACAGGCCCCAGCCAACAGCAGACTACACAGTACATCATCACAACCACCACCAATGGCAACGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | GCCCCTCCACTGGGCCGAACTGGGTGCGCTTGGGAATCCGTCTTTTaGAGAACACTCCTCCGAGGAACCTATCTATGTAGAGGACCAGAG | + |
Preference number: 5 (lower is better) Translates to: APPLGRTGCAWESVF*RTLLRGTYLCRGPE Trigger: CTCTGGTCCTCTACATAGATAGGTTCCTCGGAGGAGTGTTCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCGGCCCAGTGGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 90 bp | ACCACCTGCTGGGGTGGACGGACTTGGTCGTCAGTGTATACAATCTaGGCCACAGTTCCGGCATCCGGAACAAAGTGCACCTGGGGAAAG | + |
Preference number: 5 (lower is better) Translates to: TTCWGGRTWSSVYTI*ATVPASGTKCTWGK Trigger: CTTTCCCCAGGTGCACTTTGTTCCGGATGCCGGAACTGTGGCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCAGCAGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS TCA 90 bp | ACCACCTGCTGGGGTGGACGGACTTGGTCGTCAGTGTATACAATCTaGGCCACAGTTCCGGCATCCGGAACAAAGTGCACCTGTGCAGTG | + |
Preference number: 5 (lower is better) Translates to: TTCWGGRTWSSVYTI*ATVPASGTKCTCAV Trigger: CACTGCACAGGTGCACTTTGTTCCGGATGCCGGAACTGTGGCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCAGCAGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | TGTGGAGTCCAGGGAGTCACTGTGTGCAGAGGGCTGAACCTGGACTaGTCCAGAGAGAGCAGAGGCTTGCTTTTCCTCCAATTCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: CGVQGVTVCRGLNLD*SRESRGLLFLQFWL Trigger: CAGCCAGAATTGGAGGAAAAGCAAGCCTCTGCTCTCTCTGGAGCAGTCCAGGTTCAGCCCTCTGCACACAGTGACTCCCTGGACTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | TTGTTACAGAGATCACAGGTCAACGGGCAGTTCCCCTCCCGCCCATaGAAGCGCAAGTGTTGGTCCAGTTTGTCCTTTTCCCGGAAGGCC | + |
Preference number: 5 (lower is better) Translates to: LLQRSQVNGQFPSRP*KRKCWSSLSFSRKA Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCCGTTGACCTGTGATCTCTGTAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | TTGCCATTGGTGGTGGTTGTGATGATGTACTGTGTAGTCTGCTGTTaGCTGGGGCCTGTGGAGTCCAGGGAGTCACTGTGTGCAGAGGGC | + |
Preference number: 5 (lower is better) Translates to: LPLVVVVMMYCVVCC*LGPVESRESLCAEG Trigger: GCCCTCTGCACACAGTGACTCCCTGGACTCCACAGGCCCCAGCCAACAGCAGACTACACAGTACATCATCACAACCACCACCAATGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGATGCGGTCAGCTTTCTaGGCCTCCCTCTCGGGGTTA | + |
Preference number: 5 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLMRSAF*ASLSGL Trigger: TAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCAT...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 90 bp | TCTCTCCAGTGGCACTATCTGTCGTTAAGACAGCTGGGGTGGCGCTaGTCACAGCTGTCGTCAGTGGTGTGTGGATGGTGTTGGGAAGCT | + |
Preference number: 5 (lower is better) Translates to: SLQWHYLSLRQLGWR*SQLSSVVCGWCWEA Trigger: AGCTTCCCAACACCATCCACACACCACTGACGACAGCTGTGATCAGCGCCACCCCAGCTGTCTTAACGACAGATAGTGCCACTGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | AAGACAGCTGGGGTGGCGCTGATCACAGCTGTCGTCAGTGGTGTGTaGATGGTGTTGGGAAGCTGGGCATACTCTGGGTGTTTCTTTCGA | + |
Preference number: 5 (lower is better) Translates to: KTAGVALITAVVSGV*MVLGSWAYSGCFFR Trigger: TCGAAAGAAACACCCAGAGTATGCCCAGCTTCCCAACACCATCCACACACCACTGACGACAGCTGTGATCAGCGCCACCCCAGCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAGCTGTGGCATCCTGTaGGACATAAGCTACCTGGGC | + |
Preference number: 5 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLSCGIL*DISYLG Trigger: GCCCAGGTAGCTTATGTCCAACAGGATGCCACAGCT...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TCGAAAGTACTAAAATACGCCCAATGCTGGGAACCAGAGTGCGAGGTGGGGGCTAGCTACCTGGATGTGTaGCACCTGGATGGCGTGCTG | + |
Preference number: 5 (lower is better) Translates to: SKVLKYAQCWEPECEVGASYLDV*HLDGVL Trigger: CAGCACGCCATCCAGGTGCAACACATCCAGGTAGCT...AGCCCCCACCTCGCACTCTGGTTCCCAGCATTGGGCGTATTTTAGTACTTTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CCA 90 bp | GCGGCACTTGAACGTGAAGCTGTCGTAGTCTGTGGATGTGATCCGTaGTTTGAAGGTCTTGGAACGGCTGATGCGGTCAGCTTTCTTGGC | + |
Preference number: 5 (lower is better) Translates to: AALEREAVVVCGCDP*FEGLGTADAVSFLG Trigger: GCCAAGAAAGCTGACCGCATCAGCCGTTCCAAGACCTTCAAACCACGGATCACATCCACAGACTACGACAGCTTCACGTTCAAGTGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCATGTGCAGTCTCAGCTaGTCGGGGCGACAGAAGGCC | + |
Preference number: 5 (lower is better) Translates to: SRCNECSLQCQCVWEGEIMCSLS*SGRQKA Trigger: GGCCTTCTGTCGCCCCGACAAGCTGAGACTGCACAT...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | CTGGGGACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGGAGTTAGCAGGTCTGTaGTCACCACAGTCTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: LGTAFVGRTAAAQVSGFLELAGL*SPQSLQ Trigger: CTGGAGAGACTGTGGTGACAACAGACCTGCTAACTC...CAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS GCA 90 bp | GAGTTCCAAGCATTGGGGAGGTATGTGTGTTGTACAGAGGAATTCTaGTGCTGCTGGAGAGCCTGCCCTTGTGTGGAAGAACTGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: EFQALGRYVCCTEEF*CCWRACPCVEELPW Trigger: CCAAGGCAGTTCTTCCACACAAGGGCAGGCTCTCCAGCAGCAGCAGAATTCCTCTGTACAACACACATACCTCCCCAATGCTTGGAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | GGCATCCGGAACAAAGTGCACCTGTGCAGTGCTCTGTTCATGGTCTaGAGACGTTGGCCACACATGAGCGCTTTCATCTTTGGGATCCAT | + |
Preference number: 5 (lower is better) Translates to: GIRNKVHLCSALFMV*RRWPHMSAFIFGIH Trigger: ATGGATCCCAAAGATGAAAGCGCTCATGTGTGGCCAACGTCTGCAGACCATGAACAGAGCACTGCACAGGTGCACTTTGTTCCGGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | CTTCCTCAGTACATACAGTGGCATGGGCACGTCAGCCACCTACCACCAGCACCAACCTTCAGTTCCTGCTaGGGCTCCACGTTCTTTATT | + |
Preference number: 5 (lower is better) Translates to: LPQYIQWHGHVSHLPPAPTFSSC*GSTFFI Trigger: AATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGT...TGGTGCTGGTGGTAGGTGGCTGACGTGCCCATGCCACTGTATGTACTGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAACACGAGGCTCTCCTCTaGCTGTGGCTGCAGGTGCAA | + |
Preference number: 5 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQHEALL*LWLQVQ Trigger: TTGCACCTGCAGCCACAGCAAGAGGAGAGCCTCGTG...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCGCATTTCGGATGCGTTaGGCCCTGCGCATGTCATCG | + |
Preference number: 5 (lower is better) Translates to: SRCNECSLQCQCVWEGEIAFRMR*ALRMSS Trigger: CGATGACATGCGCAGGGCCAAACGCATCCGAAATGC...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | CCTAGCATGCAAGAGGCCCTGGGTCTGATTTCTAGCATCACACACAAAAGTGTTGAACACAGGAAGTCCTaGCGGTCGGAATGCCGGAGC | + |
Preference number: 5 (lower is better) Translates to: PSMQEALGLISSITHKSVEHRKS*RSECRS Trigger: GCTCCGGCATTCCGACCGCAAGGACTTCCTGTGTTC...AACACTTTTGTGTGTGATGCTAGAAATCAGACCCAGGGCCTCTTGCATGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGTGTGGAAGAACTGCCTaGGATATGGGAGGGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: EVARCLELQIPKLWCELWCGRTA*DMGGAE Trigger: CTCAGCCCCTCCCATATCCAAGGCAGTTCTTCCACA...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCCTGCCCCCGTTGCCATaGGTGGTGGTTGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: SRCNECSLQCQCVWEGEILPPLP*VVVVMM Trigger: CATCATCACAACCACCACCAATGGCAACGGGGGCAG...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 90 bp | CACCACTTGCAACTGTATGTGCTGAGGCTGCTGCAGACCAGATGCTaGCTGAGACACAGGGATATACTGAATCCTTTGGTAGTCCCCCTG | + |
Preference number: 5 (lower is better) Translates to: HHLQLYVLRLLQTRC*LRHRDILNPLVVPL Trigger: CAGGGGGACTACCAAAGGATTCAGTATATCCCTGTGTCTCAGTCAGCATCTGGTCTGCAGCAGCCTCAGCACATACAGTTGCAAGTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | TCAGCTTTCTTGGCCTCCCTCTCGGGGTTATGCATCCTTTGCATGTaGTCTCGGAGTTTGTCTTTTCGCTTAAACTGCTTCCCGCAGGTG | + |
Preference number: 5 (lower is better) Translates to: SAFLASLSGLCILCM*SRSLSFRLNCFPQV Trigger: CACCTGCGGGAAGCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | ATGCGGTCAGCTTTCTTGGCCTCCCTCTCGGGGTTATGCATCCTTTaGATGTGCTCTCGGAGTTTGTCTTTTCGCTTAAACTGCTTCCCG | + |
Preference number: 5 (lower is better) Translates to: MRSAFLASLSGLCIL*MCSRSLSFRLNCFP Trigger: CGGGAAGCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | GAACGGCTGATGCGGTCAGCTTTCTTGGCCTCCCTCTCGGGGTTATaGATCCTTTGCATGTGCTCTCGGAGTTTGTCTTTTCGCTTAAAC | + |
Preference number: 5 (lower is better) Translates to: ERLMRSAFLASLSGL*ILCMCSRSLSFRLN Trigger: GTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCATCAGCCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | CAAGCATTGGGGAGGTATGTGTGTTGTACAGAGGAATTCTGCTGCTaGTGGAGAGCCTGCCCTTGTGTGGAAGAACTGCCTTGGATATGG | + |
Preference number: 5 (lower is better) Translates to: QALGRYVCCTEEFCC*WRACPCVEELPWIW Trigger: CCATATCCAAGGCAGTTCTTCCACACAAGGGCAGGCTCTCCAGCAGCAGCAGAATTCCTCTGTACAACACACATACCTCCCCAATGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | CTCCAGCAGACACAGCAGAGTAACCACGGAAGGAGTTCCAAGCATTaGGGAGGTATGTGTGTTGTACAGAGGAATTCTGCTGCTGCTGGA | + |
Preference number: 5 (lower is better) Translates to: LQQTQQSNHGRSSKH*GGMCVVQRNSAAAG Trigger: TCCAGCAGCAGCAGAATTCCTCTGTACAACACACATACCTCCCCAATGCTTGGAACTCCTTCCGTGGTTACTCTGCTGTGTCTGCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CCA 90 bp | CTGGGGGCAGTGTCATCATTTGAATTTCAGATGCGGACTCATGGCTaGTATCTCCAGCAGACACAGCAGAGTAACCACGGAAGGAGTTCC | + |
Preference number: 5 (lower is better) Translates to: LGAVSSFEFQMRTHG*YLQQTQQSNHGRSS Trigger: GGAACTCCTTCCGTGGTTACTCTGCTGTGTCTGCTGGAGATACCAGCCATGAGTCCGCATCTGAAATTCAAATGATGACACTGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS-3UTR CAA 90 bp | TCCCGCTGTAATGAATGCAGTCTACAGTGTCAATGTGTCTGGGAGGGAGAGATCTTGCTGCTATACTGCTaGGAGCAGTGTGGGCAGCAG | + |
Preference number: 5 (lower is better) Translates to: SRCNECSLQCQCVWEGEILLLYC*EQCGQQ Trigger: CTGCTGCCCACACTGCTCCAAGCAGTATAGCAGCAA...GATCTCTCCCTCCCAGACACATTGACACTGTAGACTGCATTCATTACAGCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS GCA 90 bp | TTCCAAGCATTGGGGAGGTATGTGTGTTGTACAGAGGAATTCTGCTaGTGCTGGAGAGCCTGCCCTTGTGTGGAAGAACTGCCTTGGATA | + |
Preference number: 5 (lower is better) Translates to: FQALGRYVCCTEEFC*CWRACPCVEELPWI Trigger: TATCCAAGGCAGTTCTTCCACACAAGGGCAGGCTCTCCAGCAGCAGCAGAATTCCTCTGTACAACACACATACCTCCCCAATGCTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 90 bp | TTGGCGGGAGCTCAGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTTaGGCTTGCTGGCGCTCTTATAAACCTTATCACAATACTGACAGA | + |
Preference number: 5 (lower is better) Translates to: LAGAQLLGGSSECGL*ACWRSYKPYHNTDR Trigger: TCTGTCAGTATTGTGATAAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CCA 90 bp | TGTCGTCAGTGGTGTGTGGATGGTGTTGGGAAGCTGGGCATACTCTaGGTGTTTCTTTCGAATGTGTTGCACCATCTTGGTCTTGCTGCT | + |
Preference number: 5 (lower is better) Translates to: CRQWCVDGVGKLGIL*VFLSNVLHHLGLAA Trigger: AGCAGCAAGACCAAGATGGTGCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCTTCCCAACACCATCCACACACCACTGACGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | CTGATCACAGCTGTCGTCAGTGGTGTGTGGATGGTGTTGGGAAGCTaGGCATACTCTGGGTGTTTCTTTCGAATGTGTTGCACCATCTTG | + |
Preference number: 5 (lower is better) Translates to: LITAVVSGVWMVLGS*AYSGCFFRMCCTIL Trigger: CAAGATGGTGCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCTTCCCAACACCATCCACACACCACTGACGACAGCTGTGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 90 bp | GTCCAGTTTCTCATCGTGAGAATTAAGATGCTGCTGCAGCTGCTCTaGGCTGATAAACCGCCGATTGCACTCATAGCACGGCCAGTTCTT | + |
Preference number: 5 (lower is better) Translates to: VQFLIVRIKMLLQLL*ADKPPIALIARPVL Trigger: AAGAACTGGCCGTGCTATGAGTGCAATCGGCGGTTTATCAGCTCAGAGCAGCTGCAGCAGCATCTTAATTCTCACGATGAGAAACTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 90 bp | CTTCCTCTCCCTCTAGTCCTGGTAAACACGTCCAGTTTCTCATCGTaGGAATTAAGATGCTGCTGCAGCTGCTCTGAGCTGATAAACCGC | + |
Preference number: 5 (lower is better) Translates to: LPLPLVLVNTSSFSS*ELRCCCSCSELINR Trigger: GCGGTTTATCAGCTCAGAGCAGCTGCAGCAGCATCTTAATTCTCACGATGAGAAACTGGACGTGTTTACCAGGACTAGAGGGAGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | CGAACTCAGCGTAGGATGCAGCGTACCACACCTTCAGTTCCTGCTTaGGCTCCACGTTCTTTATTGTTGTGTAATACACATGGTGGCCAT | + |
Preference number: 5 (lower is better) Translates to: RTQRRMQRTTPSVPA*APRSLLLCNTHGGH Trigger: ATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGTGGTACGCTGCATCCTACGCTGAGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 90 bp | AGTAACAGGGGTTGCCACACCACTGTCTGTGATCACAAACTGACCTaGGGGCAGTGTCATCATTTGAATTTCAGATGCGGACTCATGGCT | + |
Preference number: 5 (lower is better) Translates to: SNRGCHTTVCDHKLT*GQCHHLNFRCGLMA Trigger: AGCCATGAGTCCGCATCTGAAATTCAAATGATGACACTGCCCCCAGGTCAGTTTGTGATCACAGACAGTGGTGTGGCAACCCCTGTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS-3UTR CAA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGATGGAAGCGCAAGTGTaGGTCCAGTTTGTCCTTTTC | + |
Preference number: 5 (lower is better) Translates to: EVARCLELQIPKLWCELWMEAQV*VQFVLF Trigger: GAAAAGGACAAACTGGACCAACACTTGCGCTTCCAT...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | GAGGTCGCGAGGTGTTTGGAGCTTCAGATTCCAAAATTGTGGTGTGAGCTCTGGATGTGTTGCACCATCTaGGTCTTGCTGCTATACTGC | + |
Preference number: 5 (lower is better) Translates to: EVARCLELQIPKLWCELWMCCTI*VLLLYC Trigger: GCAGTATAGCAGCAAGACCAAGATGGTGCAACACAT...CCAGAGCTCACACCACAATTTTGGAATCTGAAGCTCCAAACACCTCGCGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AGAAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAACTGTGTAGTCTGCTGTaGGCTGGGGCCTGTGGAGTC | + |
Preference number: 5 (lower is better) Translates to: RRGEIPCWLTLKRIQQIKLCSLL*AGACGV Trigger: GACTCCACAGGCCCCAGCCAACAGCAGACTACACAG...TTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | GCATCCGTAGACTTTTGTAACTGTGAAGGGGAGGGAGGGATCCTGGAAGCAACAACGGAAGAATGTGCATaGTTACACTCCTCACACCAC | + |
Preference number: 5 (lower is better) Translates to: ASVDFCNCEGEGGILEATTEECA*LHSSHH Trigger: GTGGTGTGAGGAGTGTAACAATGCACATTCTTCCGT...TGTTGCTTCCAGGATCCCTCCCTCCCCTTCACAGTTACAAAAGTCTACGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | GAGGACATGCATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTAGCTGTGGCATCCTGTaGGACATAAGCTACCTGGGC | + |
Preference number: 5 (lower is better) Translates to: EDMHGLYAYTYVRDLSIRSCGIL*DISYLG Trigger: GCCCAGGTAGCTTATGTCCAACAGGATGCCACAGCT...ACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATGCATGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | ACTCCCACGCCCAGCTCCAGCAGGGCAAATATAAATTACAAAAACTCCAACTGTAAGTGTTGGTCCAGTTaGTCCTTTTCCCGGAAGGCC | + |
Preference number: 5 (lower is better) Translates to: TPTPSSSRANINYKNSNCKCWSS*SFSRKA Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAACACTT...ACAGTTGGAGTTTTTGTAATTTATATTTGCCCTGCTGGAGCTGGGCGTGGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGGGAAGGCAGCACCTGTaGAGCTGTGGCATCCTGTTG | + |
Preference number: 5 (lower is better) Translates to: YEISHFTRNSSSVHTVAWGRQHL*SCGILL Trigger: CAACAGGATGCCACAGCTCAACAGGTGCTGCCTTCC...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAAATGTGCTCTCGGAGTTaGTCTTTTCGCTTAAACTGC | + |
Preference number: 5 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQMCSRS*SFRLNC Trigger: GCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACAT...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTGGTGTGTGGATGGTGTaGGGAAGCTGGGCATACTCT | + |
Preference number: 5 (lower is better) Translates to: KRGDTLLAHIKENPTDQIGVWMV*GSWAYS Trigger: AGAGTATGCCCAGCTTCCCAACACCATCCACACACC...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGCATGGTCTGCAGACGTaGGCCACACATGAGCGCTTT | + |
Preference number: 5 (lower is better) Translates to: YEISHFTRNSSSVHTVAWHGLQT*ATHERF Trigger: AAAGCGCTCATGTGTGGCCAACGTCTGCAGACCATG...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS CCA 90 bp | TCATTTGAATTTCAGATGAGTAACCACGGAAGGAGTTCCAAGCATTaGGGAGGTATGTGTGTTGTACAGAGGAATTCTGCTGCTGCTGGA | + |
Preference number: 5 (lower is better) Translates to: SFEFQMSNHGRSSKH*GGMCVVQRNSAAAG Trigger: TCCAGCAGCAGCAGAATTCCTCTGTACAACACACATACCTCCCCAATGCTTGGAACTCCTTCCGTGGTTACTCATCTGAAATTCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS-3UTR CAA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGCACATGGTGGCCATATaGGTAAGCTACCAGGTTCTG | + |
Preference number: 5 (lower is better) Translates to: YEISHFTRNSSSVHTVAWHMVAI*VSYQVL Trigger: CAGAACCTGGTAGCTTACCAATATGGCCACCATGTG...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTTAAGTATGTATGTACACATGGTGGCCATATaGGTAAGCTACCAGGTTCTG | + |
Preference number: 5 (lower is better) Translates to: SLSLSLSLSLSLSLSMYVHMVAI*VSYQVL Trigger: CAGAACCTGGTAGCTTACCAATATGGCCACCATGTG...TACATACATACTTAAGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AGAAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAAACCTTCAGTTCCTGCTaGGGCTCCACGTTCTTTATT | + |
Preference number: 5 (lower is better) Translates to: RRGEIPCWLTLKRIQQIKTFSSC*GSTFFI Trigger: AATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGT...TTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTGGGGTTATGCATCCTTaGCATGTGCTCTCGGAGTTT | + |
Preference number: 5 (lower is better) Translates to: KRGDTLLAHIKENPTDQIGVMHP*HVLSEF Trigger: AAACTCCGAGAGCACATGCAAAGGATGCATAACCCC...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | ACAGCATTTGTAGGGAGGACTGCTGCTGCCCAGGTTTCAGGTTTTCTGAAACAATGTCTGGATGTCTCTTaGATAAGTGATTTACCAGCA | + |
Preference number: 5 (lower is better) Translates to: TAFVGRTAAAQVSGFLKQCLDVS*ISDLPA Trigger: TGCTGGTAAATCACTTATCAAAGAGACATCCAGACA...TTGTTTCAGAAAACCTGAAACCTGGGCAGCAGCAGTCCTCCCTACAAATGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AAGAGGGGAGATACCTTGCTGGCTCACATTAAAGAGAATCCAACAGATCAAATTAGTCACTGCTTTCACTaGCCCAGAAGTAACAGGGGT | + |
Preference number: 5 (lower is better) Translates to: KRGDTLLAHIKENPTDQISHCFH*PRSNRG Trigger: ACCCCTGTTACTTCTGGGCAAGTGAAAGCAGTGACT...AATTTGATCTGTTGGATTCTCTTTAATGTGAGCCAGCAAGGTATCTCCCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AGGGCAAATATAAATTACAAAAACTCCAACTGTACCTTTGAGATGGTCTACCGCCGGCCAGTTCTTCTCTaGCTCTCGAAGAACTTTCCT | + |
Preference number: 5 (lower is better) Translates to: RANINYKNSNCTFEMVYRRPVLL*LSKNFP Trigger: AGGAAAGTTCTTCGAGAGCAAGAGAAGAACTGGCCG...GCGGTAGACCATCTCAAAGGTACAGTTGGAGTTTTTGTAATTTATATTTGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCGTGGCAGCTGAGGAATaGGGATGGACGCTTGTTCTG | + |
Preference number: 5 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIVAAEE*GWTLVL Trigger: CAGAACAAGCGTCCATCCCAATTCCTCAGCTGCCAC...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCCGTGGTTTGAAGGTCTaGGAACGGCTGATGCGGTCA | + |
Preference number: 5 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIRGLKV*ERLMRS Trigger: TGACCGCATCAGCCGTTCCAAGACCTTCAAACCACG...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 90 bp | CATTCTTATCACAATACTGACAGAAGTAATCTCGATTGGGTTTTATaGTGGGCAGGGTCAACTCAGGCACCTCTTCTATCTTCATGTCTG | + |
Preference number: 5 (lower is better) Translates to: HSYHNTDRSNLDWVL*WAGSTQAPLLSSCL Trigger: CAGACATGAAGATAGAAGAGGTGCCTGAGTTGACCCTGCCCATCATAAAACCCAATCGAGATTACTTCTGTCAGTATTGTGATAAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS TCA 90 bp | AAACCTTATCACAATACTGACAGAAGTAATCTCGATTGGGTTTTATaGTGGGCAGGGTCAACTCAGGCACCTCTTCTATCTTCATGTCTG | + |
Preference number: 5 (lower is better) Translates to: KPYHNTDRSNLDWVL*WAGSTQAPLLSSCL Trigger: CAGACATGAAGATAGAAGAGGTGCCTGAGTTGACCCTGCCCATCATAAAACCCAATCGAGATTACTTCTGTCAGTATTGTGATAAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | GAGGACATGCATGGGCTCTATGCATACACATATGTAAGAGATTTGAGCATCCGTGCTCCACGTTCTTTATaGTTGTGTAATACACATGGT | + |
Preference number: 5 (lower is better) Translates to: EDMHGLYAYTYVRDLSIRAPRSL*LCNTHG Trigger: ACCATGTGTATTACACAACAATAAAGAACGTGGAGC...ACGGATGCTCAAATCTCTTACATATGTGTATGCATAGAGCCCATGCATGTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | TTGTTAAAATTACTGAAAACTCAATGCATGAGATATAGCGGTCCTGACCTAATCTTCAGAATGTGGGCTTaGCGCTTGCTGGCGCTCTTA | + |
Preference number: 5 (lower is better) Translates to: LLKLLKTQCMRYSGPDLIFRMWA*RLLALL Trigger: TAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAA...GATTAGGTCAGGACCGCTATATCTCATGCATTGAGTTTTCAGTAATTTTAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTAGAGAGAGCAGAGGCTaGCTTTTCCTCCAATTCTGG | + |
Preference number: 5 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPRESRG*LFLQFW Trigger: CCAGAATTGGAGGAAAAGCAAGCCTCTGCTCTCTCT...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | ATGGGCCAGCTTCAGCTTCTCATTAGGTACTTTTTAGCTCTACATCTTTTAAGAACGGAAGAATGTGCATaGTTACACTCCTCACACCAC | + |
Preference number: 5 (lower is better) Translates to: MGQLQLLIRYFLALHLLRTEECA*LHSSHH Trigger: GTGGTGTGAGGAGTGTAACAATGCACATTCTTCCGT...TCTTAAAAGATGTAGAGCTAAAAAGTACCTAATGAGAAGCTGAAGCTGGCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | TATGAAATCTCCCATTTCACAAGAAACTCTTCCTCAGTACATACAGTGGCATGGCCACGTTCTTTATTGTaGTGTAATACACATGGTGGC | + |
Preference number: 5 (lower is better) Translates to: YEISHFTRNSSSVHTVAWPRSLL*CNTHGG Trigger: GCCACCATGTGTATTACACAACAATAAAGAACGTGG...CCATGCCACTGTATGTACTGAGGAAGAGTTTCTTGTGAAATGGGAGATTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS-3UTR CAA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATACTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC | + |
Preference number: 5 (lower is better) Translates to: PNKLAAFVKITENSMHEILLMKP*LQRSQV Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | AGTCTTGCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTGTGTTCGGTAATCCGTaGTTAAGGTCTGGGACAGTT | + |
Preference number: 5 (lower is better) Translates to: SLAFRDWSQHFMLKLLLPVFGNP*LRSGTV Trigger: AACTGTCCCAGACCTTAACAACGGATTACCGAACAC...AGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGCAAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | GCATTTCGTGACTGGAGTCAACATTTCATGTTGAAATTACTGTTACCTTTTTGTAAGGAGTTCCAAGCATaGGGGAGGTATGTGTGTTGT | + |
Preference number: 5 (lower is better) Translates to: AFRDWSQHFMLKLLLPFCKEFQA*GRYVCC Trigger: ACAACACACATACCTCCCCAATGCTTGGAACTCCTT...ACAAAAAGGTAACAGTAATTTCAACATGAAATGTTGACTCCAGTCACGAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS-3UTR CAA 90 bp | CCCAATAAGCTAGCTGCCTTTGTTAAAATTACTGAAAACTCAATGCATGAGATAGCTCCACGTTCTTTATaGTTGTGTAATACACATGGT | + |
Preference number: 5 (lower is better) Translates to: PNKLAAFVKITENSMHEIAPRSL*LCNTHG Trigger: ACCATGTGTATTACACAACAATAAAGAACGTGGAGC...TATCTCATGCATTGAGTTTTCAGTAATTTTAACAAAGGCAGCTAGCTTATTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 72 bp | CCTGGGATGCTGACGGAGCCGCAGGGGCGGGCTCTGTaGCCTGGATGTGTTGCACCTGGATGGCGTGCTGCG | + |
Preference number: 6 (lower is better) Translates to: PGMLTEPQGRAL*PGCVAPGWRAA Trigger: CGCAGCACGCCATCCAGGTGCAACACATCCAGGTCACAGAGCCCGCCCCTGCGGCTCCGTCAGCATCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS TCA 72 bp | AGAGGGGCTCAATGGCTGCCCAGCTACCTGGGATGCTaGCGGAGCCGCAGGGGCGGGCTCTGTGACCTGGAT | + |
Preference number: 6 (lower is better) Translates to: RGAQWLPSYLGC*RSRRGGLCDLD Trigger: ATCCAGGTCACAGAGCCCGCCCCTGCGGCTCCGTCAGCATCCCAGGTAGCTGGGCAGCCATTGAGCCCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS CAA 72 bp | CGGAGCCGCAGGGGCGGGCTCTGTGACCTGGATGTGTaGCACCTGGATGGCGTGCTGCGTGTAAGTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: RSRRGGLCDLDV*HLDGVLRVSLR Trigger: CCTCAGACTTACACGCAGCACGCCATCCAGGTGCAACACATCCAGGTCACAGAGCCCGCCCCTGCGGCTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CCAGCGGCCCCTCCACTGGGCCGAACTGGGTGCGCTTaGGAATCCGTCTTTTGGAGAACACTCCTCCGAGGA | + |
Preference number: 6 (lower is better) Translates to: PAAPPLGRTGCA*ESVFWRTLLRG Trigger: TCCTCGGAGGAGTGTTCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCGGCCCAGTGGAGGGGCCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | ACCAGCGGCCCCTCCACTGGGCCGAACTGGGTGCGCTaGGGAATCCGTCTTTTGGAGAACACTCCTCCGAGG | + |
Preference number: 6 (lower is better) Translates to: TSGPSTGPNWVR*GIRLLENTPPR Trigger: CCTCGGAGGAGTGTTCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCGGCCCAGTGGAGGGGCCGCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CTTGCCCGGGTGAGCACAGGCCGGTTAGGGATGGGATaGAAGGGGCCATGCTTCGGGCACACGGAAGAATGT | + |
Preference number: 6 (lower is better) Translates to: LARVSTGRLGMG*KGPCFGHTEEC Trigger: ACATTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCCCATCCCTAACCGGCCTGTGCTCACCCGGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CCGCAGGTGGAACACAGGAAGTCCTTGCGGTCGGAATaGCGGAGCATGTGCAGTCTCAGCTTGTCGGGGCGA | + |
Preference number: 6 (lower is better) Translates to: PQVEHRKSLRSE*RSMCSLSLSGR Trigger: TCGCCCCGACAAGCTGAGACTGCACATGCTCCGGCATTCCGACCGCAAGGACTTCCTGTGTTCCACCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | TTGGCCCTGCGCATGTCATCGGCTGTCAGAGTGGTCTaGGTAGGCACGAGGCTCTCCTCTTGCTGTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: LALRMSSAVRVV*VGTRLSSCCGC Trigger: GCAGCCACAGCAAGAGGAGAGCCTCGTGCCTACCCAGACCACTCTGACAGCCGATGACATGCGCAGGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | CGGGCAGTTCCCCTCCCGCCCATGGAAGCGCAAGTGTaGGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCC | + |
Preference number: 6 (lower is better) Translates to: RAVPLPPMEAQV*VQFVLFPEGLP Trigger: GGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | CTGCTGAGCAGAGGGGCTCAATGGCTGCCCAGCTACCTGGATGTGTaGCACCTGGATGGCGTGCTGCGTGTAAGTCTGAGGGTCGTGCAG | + |
Preference number: 6 (lower is better) Translates to: LLSRGAQWLPSYLDV*HLDGVLRVSLRVVQ Trigger: CTGCACGACCCTCAGACTTACACGCAGCACGCCATCCAGGTGCAACACATCCAGGTAGCTGGGCAGCCATTGAGCCCCTCTGCTCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS TCA 72 bp | CAGCAGACAGGAGGGGTGGCAATGGTACCCGTCAGCTaGGTGTGGGTGCTCAGCATAGGGTCAGGCTCTCCA | + |
Preference number: 6 (lower is better) Translates to: QQTGGVAMVPVS*VWVLSIGSGSP Trigger: TGGAGAGCCTGACCCTATGCTGAGCACCCACACTCAGCTGACGGGTACCATTGCCACCCCTCCTGTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CCTATCTATGTAGAGGACCAGAGGCAGGCTCGCTCTTaGCCGGGTGAGCACAGGCCGGTTAGGGATGGGATG | + |
Preference number: 6 (lower is better) Translates to: PIYVEDQRQARS*PGEHRPVRDGM Trigger: CATCCCATCCCTAACCGGCCTGTGCTCACCCGGGCAAGAGCGAGCCTGCCTCTGGTCCTCTACATAGATAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CACAGGAAGTCCTTGCGGTCGGAATGCCGGAGCATGTaGAGTCTCAGCTTGTCGGGGCGACAGAAGGCCTTG | + |
Preference number: 6 (lower is better) Translates to: HRKSLRSECRSM*SLSLSGRQKAL Trigger: CAAGGCCTTCTGTCGCCCCGACAAGCTGAGACTGCACATGCTCCGGCATTCCGACCGCAAGGACTTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GGGCAGTTCCCCTCCCGCCCATGGAAGCGCAAGTGTTaGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: GQFPSRPWKRKC*SSLSFSRKAFP Trigger: TGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | AAGTCTGAGGGTCGTGCAGCTGGCCAACGTCCACTGTaGACTGCTGAGACTGATGTGGGGAAGTGGCCGGAG | + |
Preference number: 6 (lower is better) Translates to: KSEGRAAGQRPL*TAETDVGKWPE Trigger: CTCCGGCCACTTCCCCACATCAGTCTCAGCAGTCCACAGTGGACGTTGGCCAGCTGCACGACCCTCAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GAGCCCCTGCTGTACCTGCTGAGCAGAGGGGCTCAATaGCTGCCCAGCTACCTGGATGTGTTGCACCTGGAT | + |
Preference number: 6 (lower is better) Translates to: EPLLYLLSRGAQ*LPSYLDVLHLD Trigger: ATCCAGGTGCAACACATCCAGGTAGCTGGGCAGCCATTGAGCCCCTCTGCTCAGCAGGTACAGCAGGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CAA 90 bp | ACAGGTCAACGGGCAGTTCCCCTCCCGCCCATGGAAGCGCAAGTGTaGGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCACACTGCAG | + |
Preference number: 6 (lower is better) Translates to: TGQRAVPLPPMEAQV*VQFVLFPEGLPTLQ Trigger: CTGCAGTGTGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCCGTTGACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GACAGCTGGGGTGGCGCTGATCACAGCTGTCGTCAGTaGTGTGTGGATGGTGTTGGGAAGCTGGGCATACTC | + |
Preference number: 6 (lower is better) Translates to: DSWGGADHSCRQ*CVDGVGKLGIL Trigger: GAGTATGCCCAGCTTCCCAACACCATCCACACACCACTGACGACAGCTGTGATCAGCGCCACCCCAGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | CCCTCCCGCCCATGGAAGCGCAAGTGTTGGTCCAGTTaGTCCTTTTCCCGGAAGGCCTTCCCACACTGCAGA | + |
Preference number: 6 (lower is better) Translates to: PSRPWKRKCWSS*SFSRKAFPHCR Trigger: TCTGCAGTGTGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | GCTCTCCAGGGCCAGCAGGACGCAGTTTCCGAATACTaGGCGGGAGCTCAGCTCCTGGGTGGTTCTTCAGAA | + |
Preference number: 6 (lower is better) Translates to: ALQGQQDAVSEY*AGAQLLGGSSE Trigger: TTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACTGCGTCCTGCTGGCCCTGGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | AGAGGGGCTCAATGGCTGCCCAGCTACCTGGATGTGTaGCACCTGGATGGCGTGCTGCGTGTAAGTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: RGAQWLPSYLDV*HLDGVLRVSLR Trigger: CCTCAGACTTACACGCAGCACGCCATCCAGGTGCAACACATCCAGGTAGCTGGGCAGCCATTGAGCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CAA 90 bp | TGCAGCTTCATGTGGCTCTCCAAGGAGGCGCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTCAACGGGCAGTTCCCCTCCCGCCCA | + |
Preference number: 6 (lower is better) Translates to: CSFMWLSKEALLMKP*LQRSQVNGQFPSRP Trigger: TGGGCGGGAGGGGAACTGCCCGTTGACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAGCGCCTCCTTGGAGAGCCACATGAAGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | GGAGGCACCATCTGCTGTATACACCACCTGCTGGGGTGGACGGACTaGGTCGTCAGTGTATACAATCTGAGCCACAGTTCCGGCATCCGG | + |
Preference number: 6 (lower is better) Translates to: GGTICCIHHLLGWTD*VVSVYNLSHSSGIR Trigger: CCGGATGCCGGAACTGTGGCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCAGCAGGTGGTGTATACAGCAGATGGTGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CTCTTGCTGTGGCTGCAGGTGCAAGGTGTGAGTTTCTaGTTCCTGCTCCAGAGAAGGCGGGGTTTCCTGTGG | + |
Preference number: 6 (lower is better) Translates to: LLLWLQVQGVSF*FLLQRRRGFLW Trigger: CCACAGGAAACCCCGCCTTCTCTGGAGCAGGAACCAGAAACTCACACCTTGCACCTGCAGCCACAGCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CTCTCCAGGGCCAGCAGGACGCAGTTTCCGAATACTTaGCGGGAGCTCAGCTCCTGGGTGGTTCTTCAGAAT | + |
Preference number: 6 (lower is better) Translates to: LSRASRTQFPNT*RELSSWVVLQN Trigger: ATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACTGCGTCCTGCTGGCCCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | TTGCGGTCGGAATGCCGGAGCATGTGCAGTCTCAGCTaGTCGGGGCGACAGAAGGCCTTGTCACACTCTGTA | + |
Preference number: 6 (lower is better) Translates to: LRSECRSMCSLS*SGRQKALSHSV Trigger: TACAGAGTGTGACAAGGCCTTCTGTCGCCCCGACAAGCTGAGACTGCACATGCTCCGGCATTCCGACCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | GTTGCCATTGGTGGTGGTTGTGATGATGTACTGTGTAGTCTGCTGTaGGCTGGGGCCTGTGGAGTCCAGGGAGTCACTGTGTGCAGAGGG | + |
Preference number: 6 (lower is better) Translates to: VAIGGGCDDVLCSLL*AGACGVQGVTVCRG Trigger: CCCTCTGCACACAGTGACTCCCTGGACTCCACAGGCCCCAGCCAACAGCAGACTACACAGTACATCATCACAACCACCACCAATGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | AGCACAGGCCGGTTAGGGATGGGATGCAAGGGGCCATaGTTCGGGCACACGGAAGAATGTGCATTGTTACAC | + |
Preference number: 6 (lower is better) Translates to: STGRLGMGCKGP*FGHTEECALLH Trigger: GTGTAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCCCATCCCTAACCGGCCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CAGGGAGTCACTGTGTGCAGAGGGCTGAACCTGGACTaGTCCAGAGAGAGCAGAGGCTTGCTTTTCCTCCAA | + |
Preference number: 6 (lower is better) Translates to: QGVTVCRGLNLD*SRESRGLLFLQ Trigger: TTGGAGGAAAAGCAAGCCTCTGCTCTCTCTGGAGCAGTCCAGGTTCAGCCCTCTGCACACAGTGACTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | AGCCACAGTTCCGGCATCCGGAACAAAGTGCACCTGTaGAGTGCTCTGTTCATGGTCTGCAGACGTTGGCCA | + |
Preference number: 6 (lower is better) Translates to: SHSSGIRNKVHL*SALFMVCRRWP Trigger: TGGCCAACGTCTGCAGACCATGAACAGAGCACTGCACAGGTGCACTTTGTTCCGGATGCCGGAACTGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | AGATCACAGGTCAACGGGCAGTTCCCCTCCCGCCCATaGAAGCGCAAGTGTTGGTCCAGTTTGTCCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: RSQVNGQFPSRP*KRKCWSSLSFS Trigger: GGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAACTGCCCGTTGACCTGTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | AGTTTCCGAATACTTGGCGGGAGCTCAGCTCCTGGGTaGTTCTTCAGAATGTGGGCTTTGCGCTTGCTGGCG | + |
Preference number: 6 (lower is better) Translates to: SFRILGGSSAPG*FFRMWALRLLA Trigger: CGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GAGTCGCCAGAGGGTCGGAACCATGCACACTCTCAATaGAAGGCAGCACCTGTTGAGCTGTGGCATCCTGTT | + |
Preference number: 6 (lower is better) Translates to: ESPEGRNHAHSQ*KAAPVELWHPV Trigger: AACAGGATGCCACAGCTCAACAGGTGCTGCCTTCCATTGAGAGTGTGCATGGTTCCGACCCTCTGGCGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117389.8 ENSMUST00000215847.2 |
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CDS CCA 72 bp | AGAGCCCTAATCATCACCCTGGCTGGCAGGCAGCTGTaGATCCAGTTCTGTACCTTCAGTTCCTGCTTGGGC | + |
Preference number: 6 (lower is better) Translates to: RALIITLAGRQL*IQFCTFSSCLG Trigger: GCCCAAGCAGGAACTGAAGGTACAGAACTGGATCCACAGCTGCCTGCCAGCCAGGGTGATGATTAGGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS CAA 72 bp | ATGTGGCTCTCCAAGGAGGCGCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTCAACGGGCAGTTCCCC | + |
Preference number: 6 (lower is better) Translates to: MWLSKEALLMKP*LQRSQVNGQFP Trigger: GGGGAACTGCCCGTTGACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAGCGCCTCCTTGGAGAGCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | ATCCGTGGTTTGAAGGTCTTGGAACGGCTGATGCGGTCAGCTTTCTaGGCCTCCCTCTCGGGGTTATGCATCCTTTGCATGTGCTCTCGG | + |
Preference number: 6 (lower is better) Translates to: IRGLKVLERLMRSAF*ASLSGLCILCMCSR Trigger: CCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCATCAGCCGTTCCAAGACCTTCAAACCACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 72 bp | TGGGGTGGACGGACTTGGTCGTCAGTGTATACAATCTaGGCCACAGTTCCGGCATCCGGAACAAAGTGCACC | + |
Preference number: 6 (lower is better) Translates to: WGGRTWSSVYTI*ATVPASGTKCT Trigger: GGTGCACTTTGTTCCGGATGCCGGAACTGTGGCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 72 bp | GTGGATGTAGACCAGTGTGTGCTCTGGACCGTCCACTaGCGTGTAGGAGGCACCATCTGCTGTATACACCAC | + |
Preference number: 6 (lower is better) Translates to: VDVDQCVLWTVH*RVGGTICCIHH Trigger: GTGGTGTATACAGCAGATGGTGCCTCCTACACGTCAGTGGACGGTCCAGAGCACACACTGGTCTACATCCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 72 bp | TGGCACTATCTGTCGTTAAGACAGCTGGGGTGGCGCTaGTCACAGCTGTCGTCAGTGGTGTGTGGATGGTGT | + |
Preference number: 6 (lower is better) Translates to: WHYLSLRQLGWR*SQLSSVVCGWC Trigger: ACACCATCCACACACCACTGACGACAGCTGTGATCAGCGCCACCCCAGCTGTCTTAACGACAGATAGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CCATTGGTGGTGGTTGTGATGATGTACTGTGTAGTCTaGTGTTGGCTGGGGCCTGTGGAGTCCAGGGAGTCA | + |
Preference number: 6 (lower is better) Translates to: PLVVVVMMYCVV*CWLGPVESRES Trigger: TGACTCCCTGGACTCCACAGGCCCCAGCCAACAGCAGACTACACAGTACATCATCACAACCACCACCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CAGTTCCGGCATCCGGAACAAAGTGCACCTGTGCAGTaGTCTGTTCATGGTCTGCAGACGTTGGCCACACAT | + |
Preference number: 6 (lower is better) Translates to: QFRHPEQSAPVQ*SVHGLQTLATH Trigger: ATGTGTGGCCAACGTCTGCAGACCATGAACAGAGCACTGCACAGGTGCACTTTGTTCCGGATGCCGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GGAGGCACCATCTGCTGTATACACCACCTGCTGGGGTaGACGGACTTGGTCGTCAGTGTATACAATCTGAGC | + |
Preference number: 6 (lower is better) Translates to: GGTICCIHHLLG*TDLVVSVYNLS Trigger: GCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCAGCAGGTGGTGTATACAGCAGATGGTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | AGCTGTGGCATCCTGTTGGACATAAGCTACCTGGGCTaGGTCTGTAAACAGAGTCTGTGCAGCTTCCACCGG | + |
Preference number: 6 (lower is better) Translates to: SCGILLDISYLG*VCKQSLCSFHR Trigger: CCGGTGGAAGCTGCACAGACTCTGTTTACAGACCCAGCCCAGGTAGCTTATGTCCAACAGGATGCCACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | ACGCAGTTTCCGAATACTTGGCGGGAGCTCAGCTCCTaGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCT | + |
Preference number: 6 (lower is better) Translates to: TQFPNTWRELSS*VVLQNVGFALA Trigger: AGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGCTCCCGCCAAGTATTCGGAAACTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | TGTGTTGCACCATCTTGGTCTTGCTGCTATACTGCTTaGAGCAGTGTGGGCAGCAGACAGGAGGGGTGGCAA | + |
Preference number: 6 (lower is better) Translates to: CVAPSWSCCYTA*SSVGSRQEGWQ Trigger: TTGCCACCCCTCCTGTCTGCTGCCCACACTGCTCCAAGCAGTATAGCAGCAAGACCAAGATGGTGCAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GAGTTAGCAGGTCTGTTGTCACCACAGTCTCTCCAGTaGCACTATCTGTCGTTAAGACAGCTGGGGTGGCGC | + |
Preference number: 6 (lower is better) Translates to: ELAGLLSPQSLQ*HYLSLRQLGWR Trigger: GCGCCACCCCAGCTGTCTTAACGACAGATAGTGCCACTGGAGAGACTGTGGTGACAACAGACCTGCTAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | GCTCAGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTTaGGCTTGCTGGCGCTCTTATAAACCTGCAGGGTTA | + |
Preference number: 6 (lower is better) Translates to: AQLLGGSSECGL*ACWRSYKPAGL Trigger: TAACCCTGCAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CTGGGCCGAACTGGGTGCGCTTGGGAATCCGTCTTTTaGAGAACACTCCTCCGAGGAACCTATCTATGTAGA | + |
Preference number: 6 (lower is better) Translates to: LGRTGCAWESVF*RTLLRGTYLCR Trigger: TCTACATAGATAGGTTCCTCGGAGGAGTGTTCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCGGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GAACGTGAAGCTGTCGTAGTCTGTGGATGTGATCCGTaGTTTGAAGGTCTTGGAACGGCTGATGCGGTCAGC | + |
Preference number: 6 (lower is better) Translates to: EREAVVVCGCDP*FEGLGTADAVS Trigger: GCTGACCGCATCAGCCGTTCCAAGACCTTCAAACCACGGATCACATCCACAGACTACGACAGCTTCACGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | AAGGGGCCATGCTTCGGGCACACGGAAGAATGTGCATaGTTACACTCCTCACACCCTGCAAGAGAAAGCGAG | + |
Preference number: 6 (lower is better) Translates to: KGPCFGHTEECA*LHSSHPARESE Trigger: CTCGCTTTCTCTTGCAGGGTGTGAGGAGTGTAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CAA 72 bp | TTGAAGGTCTTGGAACGGCTGATGCGGTCAGCTTTCTaGGCCTCCCTCTCGGGGTTATGCATCCTTTGCATG | + |
Preference number: 6 (lower is better) Translates to: LKVLERLMRSAF*ASLSGLCILCM Trigger: CATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCATCAGCCGTTCCAAGACCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | GGGACAGTTCTGTCATCGCCTGAGTTAGCAGGTCTGTaGTCACCACAGTCTCTCCAGTGGCACTATCTGTCG | + |
Preference number: 6 (lower is better) Translates to: GTVLSSPELAGL*SPQSLQWHYLS Trigger: CGACAGATAGTGCCACTGGAGAGACTGTGGTGACAACAGACCTGCTAACTCAGGCGATGACAGAACTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | AAGGGGCCATGCTTCGGGCACACGGAAGAATGTGCATaGTTACACTCCTCACACCACAAGTCATGGGGGTCA | + |
Preference number: 6 (lower is better) Translates to: KGPCFGHTEECA*LHSSHHKSWGS Trigger: TGACCCCCATGACTTGTGGTGTGAGGAGTGTAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CCCATTTTCACTGGTGATTTCCAAACGGATAAATTTTaGAGGACGCCCGGGTCGCCGGCCAGGACCAAATCT | + |
Preference number: 6 (lower is better) Translates to: PIFTGDFQTDKF*RTPGSPARTKS Trigger: AGATTTGGTCCTGGCCGGCGACCCGGGCGTCCTCCAAAATTTATCCGTTTGGAAATCACCAGTGAAAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | GCTGTCGTCAGTGGTGTGTGGATGGTGTTGGGAAGCTaGGCATACTCTGGGTGTTTCTTTCGAATGTGTTGC | + |
Preference number: 6 (lower is better) Translates to: AVVSGVWMVLGS*AYSGCFFRMCC Trigger: GCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCTTCCCAACACCATCCACACACCACTGACGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | ATCTGCTGTATACACCACCTGCTGGGGTGGACGGACTaGGTCGTCAGTGTATACAATCTGAGCCACAGTTCC | + |
Preference number: 6 (lower is better) Translates to: ICCIHHLLGWTD*VVSVYNLSHSS Trigger: GGAACTGTGGCTCAGATTGTATACACTGACGACCAAGTCCGTCCACCCCAGCAGGTGGTGTATACAGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074510.4 ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | TCCTTTGGTAGTCCCCCTGAGGTGTTCGGTAATCCGTaGTTAAGGTCTGGGACAGTTCTGTCATCGCCTGAG | + |
Preference number: 6 (lower is better) Translates to: SFGSPPEVFGNP*LRSGTVLSSPE Trigger: CTCAGGCGATGACAGAACTGTCCCAGACCTTAACAACGGATTACCGAACACCTCAGGGGGACTACCAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | TCTGGCAATGGGGTTCTGTTGAGCTGTGGCATCCTGTaGGACATAAGCTACCTGGGCTGGGTCTGTAAACAG | + |
Preference number: 6 (lower is better) Translates to: SGNGVLLSCGIL*DISYLGWVCKQ Trigger: CTGTTTACAGACCCAGCCCAGGTAGCTTATGTCCAACAGGATGCCACAGCTCAACAGAACCCCATTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CAA 90 bp | ATGGGATGCAAGGGGCCATGCTTCGGGCACACGGAAGAATGTGCATaGTTACACTCCTCACACCCTGCAAGAGAAAGCGAGCTTAAAGAG | + |
Preference number: 6 (lower is better) Translates to: MGCKGPCFGHTEECA*LHSSHPARESELKE Trigger: CTCTTTAAGCTCGCTTTCTCTTGCAGGGTGTGAGGAGTGTAACAATGCACATTCTTCCGTGTGCCCGAAGCATGGCCCCTTGCATCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CAA 90 bp | GATGCGGTCAGCTTTCTTGGCCTCCCTCTCGGGGTTATGCATCCTTaGCATGTGCTCTCGGAGTTTGTCTTTTCGCTTAAACTGCTTCCC | + |
Preference number: 6 (lower is better) Translates to: DAVSFLGLPLGVMHP*HVLSEFVFSLKLLP Trigger: GGGAAGCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 72 bp | CTCATCGTGAGAATTAAGATGCTGCTGCAGCTGCTCTaGGCTGATAAACCGCCGATTGCACTCATAGCACGG | + |
Preference number: 6 (lower is better) Translates to: LIVRIKMLLQLL*ADKPPIALIAR Trigger: CCGTGCTATGAGTGCAATCGGCGGTTTATCAGCTCAGAGCAGCTGCAGCAGCATCTTAATTCTCACGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS TCA 72 bp | TCCGTTGTTAAGGTCTGGGACAGTTCTGTCATCGCCTaGGTTAGCAGGTCTGTTGTCACCACAGTCTCTCCA | + |
Preference number: 6 (lower is better) Translates to: SVVKVWDSSVIA*VSRSVVTTVSP Trigger: TGGAGAGACTGTGGTGACAACAGACCTGCTAACTCAGGCGATGACAGAACTGTCCCAGACCTTAACAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | GTCATGGATTTTCTGATTCACGAACTCAGCGTAGGATaGAGCGTACCACACCTTCAGTTCCTGCTTGGGCTC | + |
Preference number: 6 (lower is better) Translates to: VMDFLIHELSVG*SVPHLQFLLGL Trigger: GAGCCCAAGCAGGAACTGAAGGTGTGGTACGCTGCATCCTACGCTGAGTTCGTGAATCAGAAAATCCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | ATGCGGTCAGCTTTCTTGGCCTCCCTCTCGGGGTTATaGATCCTTTGCATGTGCTCTCGGAGTTTGTCTTTT | + |
Preference number: 6 (lower is better) Translates to: MRSAFLASLSGL*ILCMCSRSLSF Trigger: AAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCTGACCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CCTTTTATAGGAAAGAGCCCTAATCATCACCCTGGCTaGCAGGCAGCTGTGGATCCAGTTCTGTACCTTCAG | + |
Preference number: 6 (lower is better) Translates to: PFIGKSPNHHPG*QAAVDPVLYLQ Trigger: CTGAAGGTACAGAACTGGATCCACAGCTGCCTGCCAGCCAGGGTGATGATTAGGGCTCTTTCCTATAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS CAA 72 bp | GAAAAAGGTGCTGACCTGTTGAGCTGTGGCATCCTGTaGGACATAAGCTACCTGGGCTGGGTCTGTAAACAG | + |
Preference number: 6 (lower is better) Translates to: EKGADLLSCGIL*DISYLGWVCKQ Trigger: CTGTTTACAGACCCAGCCCAGGTAGCTTATGTCCAACAGGATGCCACAGCTCAACAGGTCAGCACCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CAA 90 bp | TTAAGGTCTGGGACAGTTCTGTCATCGCCTGAGTTAGCAGGTCTGTaGTCACCACAGTCTCTCCAGTGGCACTATCTGTCGTTAAGACAG | + |
Preference number: 6 (lower is better) Translates to: LRSGTVLSSPELAGL*SPQSLQWHYLSLRQ Trigger: CTGTCTTAACGACAGATAGTGCCACTGGAGAGACTGTGGTGACAACAGACCTGCTAACTCAGGCGATGACAGAACTGTCCCAGACCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | ACCACTGTCTGTGATCACAAACTGACCTGGGGGCAGTGTCATCATTaGAATTTCAGATGCGGACTCATGGCTGGTATCTCCAGCAGACAC | + |
Preference number: 6 (lower is better) Translates to: TTVCDHKLTWGQCHH*NFRCGLMAGISSRH Trigger: GTGTCTGCTGGAGATACCAGCCATGAGTCCGCATCTGAAATTCAAATGATGACACTGCCCCCAGGTCAGTTTGTGATCACAGACAGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS TCA 72 bp | CCTCTAGTCCTGGTAAACACGTCCAGTTTCTCATCGTaGGAATTAAGATGCTGCTGCAGCTGCTCTGAGCTG | + |
Preference number: 6 (lower is better) Translates to: PLVLVNTSSFSS*ELRCCCSCSEL Trigger: CAGCTCAGAGCAGCTGCAGCAGCATCTTAATTCTCACGATGAGAAACTGGACGTGTTTACCAGGACTAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | TTGGCCTCCCTCTCGGGGTTATGCATCCTTTGCATGTaGTCTCGGAGTTTGTCTTTTCGCTTAAACTGCTTC | + |
Preference number: 6 (lower is better) Translates to: LASLSGLCILCM*SRSLSFRLNCF Trigger: GAAGCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | GCTTTCTTGGCCTCCCTCTCGGGGTTATGCATCCTTTaGATGTGCTCTCGGAGTTTGTCTTTTCGCTTAAAC | + |
Preference number: 6 (lower is better) Translates to: AFLASLSGLCIL*MCSRSLSFRLN Trigger: GTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | AACAAAGTGCACCTGTGCAGTGCTCTGTTCATGGTCTaGAGACGTTGGCCACACATGAGCGCTTTCATCTTT | + |
Preference number: 6 (lower is better) Translates to: NKVHLCSALFMV*RRWPHMSAFIF Trigger: AAAGATGAAAGCGCTCATGTGTGGCCAACGTCTGCAGACCATGAACAGAGCACTGCACAGGTGCACTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117389.8 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | GCTCAGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTTaGGCTTGCTGGCGCTCTTATAAACCTTATCACAAT | + |
Preference number: 6 (lower is better) Translates to: AQLLGGSSECGL*ACWRSYKPYHN Trigger: ATTGTGATAAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CCA 72 bp | TGGTGTGTGGATGGTGTTGGGAAGCTGGGCATACTCTaGGTGTTTCTTTCGAATGTGTTGCACCATCTTGGT | + |
Preference number: 6 (lower is better) Translates to: WCVDGVGKLGIL*VFLSNVLHHLG Trigger: ACCAAGATGGTGCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCTTCCCAACACCATCCACACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | TCGGGGTTATGCATCCTTTGCATGTGCTCTCGGAGTTaGTCTTTTCGCTTAAACTGCTTCCCGCAGGTGGAA | + |
Preference number: 6 (lower is better) Translates to: SGLCILCMCSRS*SFRLNCFPQVE Trigger: TTCCACCTGCGGGAAGCAGTTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | TATACTGAATCCTTTGGTAGTCCCCCTGAGGTGTTCGGTAATCCGTaGTTAAGGTCTGGGACAGTTCTGTCATCGCCTGAGTTAGCAGGT | + |
Preference number: 6 (lower is better) Translates to: YTESFGSPPEVFGNP*LRSGTVLSSPELAG Trigger: ACCTGCTAACTCAGGCGATGACAGAACTGTCCCAGACCTTAACAACGGATTACCGAACACCTCAGGGGGACTACCAAAGGATTCAGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CTCCTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTaGTGGCGCTCTTATAAACCTGCAGGGTTAAATATT | + |
Preference number: 6 (lower is better) Translates to: LLGGSSECGLCA*WRSYKPAGLNI Trigger: AATATTTAACCCTGCAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074510.4 ENSMUST00000215847.2 |
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CDS GCA 72 bp | AGCTGGGCATACTCTGGGTGTTTCTTTCGAATGTGTTaGACCATCTTGGTCTTGCTGCTATACTGCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: SWAYSGCFFRMC*TILVLLLYCLE Trigger: CTCCAAGCAGTATAGCAGCAAGACCAAGATGGTGCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS GCA 72 bp | CTCCTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTaGTGGCGCTCTTATAAACCTTATCACAATACTGAC | + |
Preference number: 6 (lower is better) Translates to: LLGGSSECGLCA*WRSYKPYHNTD Trigger: GTCAGTATTGTGATAAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CCA 72 bp | GTGTCATCATTTGAATTTCAGATGCGGACTCATGGCTaGTATCTCCAGCAGACACAGCAGAGTAACCACGGA | + |
Preference number: 6 (lower is better) Translates to: VSSFEFQMRTHG*YLQQTQQSNHG Trigger: TCCGTGGTTACTCTGCTGTGTCTGCTGGAGATACCAGCCATGAGTCCGCATCTGAAATTCAAATGATGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CAA 72 bp | AGCTTTCTTGGCCTCCCTCTCGGGGTTATGCATCCTTaGCATGTGCTCTCGGAGTTTGTCTTTTCGCTTAAA | + |
Preference number: 6 (lower is better) Translates to: SFLGLPLGVMHP*HVLSEFVFSLK Trigger: TTTAAGCGAAAAGACAAACTCCGAGAGCACATGCAAAGGATGCATAACCCCGAGAGGGAGGCCAAGAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | TGTGATCACAAACTGACCTGGGGGCAGTGTCATCATTaGAATTTCAGATGCGGACTCATGGCTGGTATCTCC | + |
Preference number: 6 (lower is better) Translates to: CDHKLTWGQCHH*NFRCGLMAGIS Trigger: GGAGATACCAGCCATGAGTCCGCATCTGAAATTCAAATGATGACACTGCCCCCAGGTCAGTTTGTGATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074510.4 |
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CDS CAA 90 bp | CAGCGTACCACACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATaGTTGTGTAATACACATGGTGGCCATATTGGTAAGCTACCAGGT | + |
Preference number: 6 (lower is better) Translates to: QRTTPSVPAWAPRSL*LCNTHGGHIGKLPG Trigger: ACCTGGTAGCTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGTGGTACGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | CGTACCACACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATTGTaGTGTAATACACATGGTGGCCATATTGGTAAGCTACCAGGTTCT | + |
Preference number: 6 (lower is better) Translates to: RTTPSVPAWAPRSLL*CNTHGGHIGKLPGS Trigger: AGAACCTGGTAGCTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGTGGTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CGTAGGATGCAGCGTACCACACCTTCAGTTCCTGCTTaGGCTCCACGTTCTTTATTGTTGTGTAATACACAT | + |
Preference number: 6 (lower is better) Translates to: RRMQRTTPSVPA*APRSLLLCNTH Trigger: ATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGTGGTACGCTGCATCCTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CCA 72 bp | CTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCTaGCGCTCTTATAAACCTTATCACAATACTGACAGA | + |
Preference number: 6 (lower is better) Translates to: LGGSSECGLCAC*RSYKPYHNTDR Trigger: TCTGTCAGTATTGTGATAAGGTTTATAAGAGCGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215499.2 |
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CDS CAA 72 bp | AAGCTGGGCATACTCTGGGTGTTTCTTTCGAATGTGTaGCACCATCTTGGTCTTGCTGCTATACTGCTTGGA | + |
Preference number: 6 (lower is better) Translates to: KLGILWVFLSNV*HHLGLAAILLG Trigger: TCCAAGCAGTATAGCAGCAAGACCAAGATGGTGCAACACATTCGAAAGAAACACCCAGAGTATGCCCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 90 bp | TCCAGTTCTGTACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATaGTTGTGTAATACACATGGTGGCCATATTGGTAAGCTACCAGGT | + |
Preference number: 6 (lower is better) Translates to: SSSVPSVPAWAPRSL*LCNTHGGHIGKLPG Trigger: ACCTGGTAGCTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTACAGAACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS CAA 90 bp | AGTTCTGTACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATTGTaGTGTAATACACATGGTGGCCATATTGGTAAGCTACCAGGTTCT | + |
Preference number: 6 (lower is better) Translates to: SSVPSVPAWAPRSLL*CNTHGGHIGKLPGS Trigger: AGAACCTGGTAGCTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTACAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |
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CDS CAA 72 bp | ACACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATaGTTGTGTAATACACATGGTGGCCATATTGGTAAG | + |
Preference number: 6 (lower is better) Translates to: TPSVPAWAPRSL*LCNTHGGHIGK Trigger: CTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074510.4 ENSMUST00000215499.2 ENSMUST00000215847.2 |
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CDS CAA 72 bp | GTACCTTCAGTTCCTGCTTGGGCTCCACGTTCTTTATaGTTGTGTAATACACATGGTGGCCATATTGGTAAG | + |
Preference number: 6 (lower is better) Translates to: VPSVPAWAPRSL*LCNTHGGHIGK Trigger: CTTACCAATATGGCCACCATGTGTATTACACAACAATAAAGAACGTGGAGCCCAAGCAGGAACTGAAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117389.8 |