Pregenerated sensors for PRDM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038151Ensembl transcript IDs: ENSMUST00000039174.11, ENSMUST00000105490.3, ENSMUST00000218369.2
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATCCCAAGATGCTACACACCCTCACCTCTGCACTGAGGTGCTCTaGTCTCTGGTAGTAGGCAGGGTGGTGCCCAAGCACCAAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: PSQDATHPHLCTEVL*SLVVGRVVPKHQSH Trigger: ATGACTTTGGTGCTTGGGCACCACCCTGCCTACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTGGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR GCA 90 bp | GTGTGGTGTTTCTATCCATCCCAAGATGCTACACACCCTCACCTCTaGACTGAGGTGCTCTGCTCTCTGGTAGTAGGCAGGGTGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: VWCFYPSQDATHPHL*TEVLCSLVVGRVVP Trigger: GGGCACCACCCTGCCTACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTGGGATGGATAGAAACACCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 90 bp | GTGTTTCTATCCATCCCAAGATGCTACACACCCTCACCTCTGCACTaGGGTGCTCTGCTCTCTGGTAGTAGGCAGGGTGGTGCCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: VFLSIPRCYTPSPLH*GALLSGSRQGGAQA Trigger: TGCTTGGGCACCACCCTGCCTACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTGGGATGGATAGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 90 bp | ACACCCAGGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTaGCATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: TPRDAKVIWPLRMVM*HWETGWQSLPVTVW Trigger: CCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCCTGGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR GCA 90 bp | TTGGAGTCCTTCTTTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTaGCAGCGGAGCTTTGCAGATCTGGAGTCATGTACAAGCAATTTG | + |
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Preference number: 1 (lower is better) Translates to: LESFFNSREVQGSTR*QRSFADLESCTSNL Trigger: CAAATTGCTTGTACATGACTCCAGATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAAAGAAGGACTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR TCA 90 bp | AGCCTACCATTTGGAAGCACACACGCTCAGCTGGGTAGCAACTCATaGGATACGACATTAATTCCTGCACTCCTACTGGATACACTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLPFGSTHAQLGSNS*DTTLIPALLLDTLN Trigger: ATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGTATCTCATGAGTTGCTACCCAGCTGAGCGTGTGTGCTTCCAAATGGTAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR CCA 90 bp | CAAACAAACAAACCAACCAACCAACCAACCAACCACTGTTCATTGTaGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATG | + |
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Preference number: 1 (lower is better) Translates to: QTNKPTNQPTNHCSL*AQHSHVRGLRGRQM Trigger: CATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 90 bp | TTTGCAGATCTGGAGTCATGTACAAGCAATTTGCTAAAGGCACCCTaGTTCACCAAGCCATACCCTAAGAAGCAACACGAAACACTTATT | + |
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Preference number: 1 (lower is better) Translates to: FADLESCTSNLLKAP*FTKPYPKKQHETLI Trigger: AATAAGTGTTTCGTGTTGCTTCTTAGGGTATGGCTTGGTGAATCAGGGTGCCTTTAGCAAATTGCTTGTACATGACTCCAGATCTGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGCCCTCACCTCTGCACTaGGGTGCTCTGCTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLPSPLH*GALLSG Trigger: ACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGG...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR TCA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCGGGGCTGCAGCCCAGTaGCAGCTTGCTTGCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGGAAAQ*QLACLL Trigger: TAGCAAGCAAGCAAGCTGTCACTGGGCTGCAGCCCC...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR CAA 90 bp | CAGGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATaGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: QGCQSHMATQNGHVT*GDRLAKPSCHCLVK Trigger: TTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGATGCTACACACCCTCACCTCTGCACTGAGGTGCTCTGCTCTCTGGTAGTAAACACACCAACCACATaGCTTTGGCAATATCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QDATHPHLCTEVLCSLVVNTPTT*LWQYQN Trigger: GTTTTGATATTGCCAAAGTCATGTGGTTGGTGTGTT...TACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGTACGACATTAATTCCTaGACTCCTACTGGATACACT | + |
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Preference number: 2 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLYDINS*TPTGYT Trigger: AGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGTA...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTTTGCTAAAGGCACCCTaGTTCACCAAGCCATACCCT | + |
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Preference number: 2 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTLLKAP*FTKPYP Trigger: AGGGTATGGCTTGGTGAATCAGGGTGCCTTTAGCAA...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTTTGCTAAAGGCACCCTaGTTCACCAAGCCATACCCT | + |
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Preference number: 2 (lower is better) Translates to: CDIGRQVGKAFLSLFGKILLKAP*FTKPYP Trigger: AGGGTATGGCTTGGTGAATCAGGGTGCCTTTAGCAA...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGGATTGTGTGATCTTCTaGGTTAACACACCAACCACA | + |
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Preference number: 2 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQDCVIF*VNTPTT Trigger: TGTGGTTGGTGTGTTAACTCAGAAGATCACACAATC...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTTAATTCCAGAGAGGTaGAGGGAAGCACCCGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RLPEITELSSKSQAFKQMLIPER*REAPGA Trigger: GGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGTGTTTGGTAAAATTGTaGCTAGGAGGAGGAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQCLVKL*LGGGKP Trigger: TGGTTTTCCTCCTCCTAGTCACAATTTTACCAAACA...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | TTATTACACCTTGAACACCAACAGGTAACCTTTGGGCTTAGGAGAATACAGGACAAGCCAACAGCAAAATaGCAGCCAGACTCAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: LLHLEHQQVTFGLRRIQDKPTAK*QPDSNP Trigger: GGGGTTTGAGTCTGGCTGTCATTTTGCTGTTGGCTT...GTCCTGTATTCTCCTAAGCCCAAAGGTTACCTGTTGGTGTTCAAGGTGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR GCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAATTAATTCCAGAGAGGTaGAGGGAAGCACCCGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TTLIPALLLDTLNEVIVELIPER*REAPGA Trigger: GGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR CAA 90 bp | AAACAAACAAACAAACCAACCAACCAACCAACCAACCACTGTTCATaGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: KQTNKPTNQPTNHCS*WAQHSHVRGLRGRQ Trigger: CTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACGCCTCATTTATGCCCTaGGATTTTGGTAACATTGGA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTTSVLYDRSSEHASFMP*DFGNIG Trigger: TCCAATGTTACCAAAATCTCAGGGCATAAATGAGGC...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | CAAATACAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACATTTTAAGTGTGGCCTaGGCCTTTCTATATCAAATC | + |
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Preference number: 2 (lower is better) Translates to: QIQMHPEMSVLLGLQPSDILSVA*AFLYQI Trigger: GATTTGATATAGAAAGGCTCAGGCCACACTTAAAAT...GTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCCATTGGGAGACAGGTTaGCAAAGCCTTCCTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: KAEFYRYNTVDALGTGMFHWETG*QSLPVT Trigger: AGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATG...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTGTCACTCAGATTGTGTaGTCTTCTGAGTTAACACAC | + |
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Preference number: 2 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTVTQIV*SSELTH Trigger: GTGTGTTAACTCAGAAGATCACACAATCTGAGTGAC...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACTGTTTGGTAAAATTGTaGCTAGGAGGAGGAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTTSVLYDRSSEHCLVKL*LGGGKP Trigger: TGGTTTTCCTCCTCCTAGTCACAATTTTACCAAACA...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCAATAGGAAGGCGCTATaGAAACATATCCACACAAAT | + |
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Preference number: 2 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGNRKAL*KHIHTN Trigger: ATTTGTGTGGATATGTTTGCATAGCGCCTTCCTATT...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATGATAACACCCAGGGATaGCAAAGTCATATGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: VLFACLYFKCGLSLSISNDNTQG*QSHMAT Trigger: AGTGGCCATATGACTTTGGCATCCCTGGGTGTTATC...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAAGATTGTGTGATCTTCTaGGTTAACACACCAACCACA | + |
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Preference number: 2 (lower is better) Translates to: TTLIPALLLDTLNEVIVEDCVIF*VNTPTT Trigger: TGTGGTTGGTGTGTTAACTCAGAAGATCACACAATC...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTCTTTGCCTCATTTATaGCCTGAGATTTTGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: RLPEITELSSKSQAFKQMSLPHL*PEILVT Trigger: TGTTACCAAAATCTCAGGGCATAAATGAGGCAAAGA...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACGCCTCATTTATGCCCTaGGATTTTGGTAACATTGGA | + |
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Preference number: 2 (lower is better) Translates to: FKQMCRNYLQRMATGQRYASFMP*DFGNIG Trigger: TCCAATGTTACCAAAATCTCAGGGCATAAATGAGGC...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR GCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAATCTTTGCCTCATTTATaGCCTGAGATTTTGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: TTLIPALLLDTLNEVIVESLPHL*PEILVT Trigger: TGTTACCAAAATCTCAGGGCATAAATGAGGCAAAGA...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATATCATAGAGAAAGGTTaGCTGAAATCACAGAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: VLFACLYFKCGLSLSISNIIEKG*LKSQSY Trigger: ATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGAT...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR TCA 72 bp | TCCATCCCAAGATGCTACACACCCTCACCTCTGCACTaGGGTGCTCTGCTCTCTGGTAGTAGGCAGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SIPRCYTPSPLH*GALLSGSRQGG Trigger: ACCACCCTGCCTACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTGGGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR GCA 72 bp | TTCTATCCATCCCAAGATGCTACACACCCTCACCTCTaGACTGAGGTGCTCTGCTCTCTGGTAGTAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: FYPSQDATHPHL*TEVLCSLVVGR Trigger: CCTGCCTACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTGGGATGGATAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR GCA 72 bp | AGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTaGAGATCTGGAGTCATGTACAAGCAATTTGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: RGAGKHPVPAEL*RSGVMYKQFAK Trigger: TTTAGCAAATTGCTTGTACATGACTCCAGATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR CCA 72 bp | CACCCAGGGATGCCAAAGTCATATGGCCACTCAGAATaGTCATGTGACATTGGGAGACAGGTTGGCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: HPGMPKSYGHSE*SCDIGRQVGKA Trigger: GGCTTTGCCAACCTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR-3UTR CAA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCGAAATGTCAGTCTTGTaGGGGCTGCAGCCCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGEMSVL*GLQPSD Trigger: GTCACTGGGCTGCAGCCCCAACAAGACTGACATTTC...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 72 bp | TCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTaGCAGCTTGCTTGCTTGCTAGCATGTGTGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: SRNVSLVGAAAQ*QLACLLACVES Trigger: AGATTCCACACATGCTAGCAAGCAAGCAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 72 bp | GATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTaGCATTGGGAGACAGGTTGGCAAAGCCTTCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: DAKVIWPLRMVM*HWETGWQSLPV Trigger: GACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR CCA 72 bp | CTCAAATACAGATGCATCCAGAAATGTCAGTCTTGTTaGGGCTGCAGCCCAGTGACAGCTTGCTTGCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LKYRCIQKCQSC*GCSPVTACLLA Trigger: AGCAAGCAAGCAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR CAA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGCTTCCCCTCAAATTATaGCTGAGCAATTCTGCACAT | + |
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Preference number: 3 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLLPLKL*LSNSAH Trigger: ATGTGCAGAATTGCTCAGCAATAATTTGAGGGGAAG...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR CCA 72 bp | GACACACATGTAGCAAGGCCATCAAATGCGACTGGATaGTGTGGTGTTTCTATCCATCCCAAGATGCTACAC | + |
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Preference number: 3 (lower is better) Translates to: DTHVARPSNATG*CGVSIHPKMLH Trigger: GTGTAGCATCTTGGGATGGATAGAAACACCACACCATCCAGTCGCATTTGATGGCCTTGCTACATGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR TCA 72 bp | TTTGGAAGCACACACGCTCAGCTGGGTAGCAACTCATaGGATACGACATTAATTCCTGCACTCCTACTGGAT | + |
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Preference number: 3 (lower is better) Translates to: FGSTHAQLGSNS*DTTLIPALLLD Trigger: ATCCAGTAGGAGTGCAGGAATTAATGTCGTATCTCATGAGTTGCTACCCAGCTGAGCGTGTGTGCTTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| 3UTR CCA 72 bp | AAACCAACCAACCAACCAACCAACCACTGTTCATTGTaGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KPTNQPTNHCSL*AQHSHVRGLRG Trigger: TCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGTTGGTTGGTTGGTTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCACATTGGGAGACAGGTaGGCAAAGCCTTCCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KAEFYRYNTVDALGTGMFTLGDR*AKPSCH Trigger: GTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGT...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAATACAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACGGTAGGGCACCAGCTTaGTGCAATTTTGATATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QIQMHPEMSVLLGLQPSDGRAPA*CNFDIK Trigger: TTTAATATCAAAATTGCACAAAGCTGGTGCCCTACC...GTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| 3UTR TCA 72 bp | CTGGAGTCATGTACAAGCAATTTGCTAAAGGCACCCTaGTTCACCAAGCCATACCCTAAGAAGCAACACGAA | + |
|
Preference number: 3 (lower is better) Translates to: LESCTSNLLKAP*FTKPYPKKQHE Trigger: TTCGTGTTGCTTCTTAGGGTATGGCTTGGTGAATCAGGGTGCCTTTAGCAAATTGCTTGTACATGACTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATGGTGCCAGCGGAGCTTaGCAGATCTGGAGTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: VLFACLYFKCGLSLSISNGASGA*QIWSHV Trigger: TACATGACTCCAGATCTGCAAAGCTCCGCTGGCACC...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACTTATGCCCTGAGATTTaGGTAACATTGGAGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTTSVLYDRSSEHLCPEI*VTLESF Trigger: GAAGGACTCCAATGTTACCAAAATCTCAGGGCATAA...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACGGTGCCAGCGGAGCTTaGCAGATCTGGAGTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYGASGA*QIWSHV Trigger: TACATGACTCCAGATCTGCAAAGCTCCGCTGGCACC...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCGGTAGGGCACCAGCTTaGTGCAATTTTGATATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KAEFYRYNTVDALGTGMFGRAPA*CNFDIK Trigger: TTTAATATCAAAATTGCACAAAGCTGGTGCCCTACC...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR TCA 72 bp | TGTATCCCCAACTTAGAGAATGTCACTCAGATTGTGTaGTCTTCTGAGTTAACACACCAACCACATGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: CIPNLENVTQIV*SSELTHQPHDF Trigger: AAAGTCATGTGGTTGGTGTGTTAACTCAGAAGATCACACAATCTGAGTGACATTCTCTAAGTTGGGGATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR GCA 72 bp | CAAGAAAAGCACAGGAGGAAAACAACCCAAGTTCACTaGAAAGAAATCGTATTTGTATTTGGTGTCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: QEKHRRKTTQVH*KEIVFVFGVNV Trigger: GACATTGACACCAAATACAAATACGATTTCTTTGCAGTGAACTTGGGTTGTTTTCCTCCTGTGCTTTTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| 3UTR-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATATATAGTGAGTCTTaGCCTCATTTATGCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFIYSES*PHLCPE Trigger: CTCAGGGCATAAATGAGGCAAAGACTCACTATATAT...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGAGGCAGCCCAGCAGCTaGGCCCGCAGGGCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLRQPSS*ARRAVA Trigger: GGCAACTGCCCTGCGGGCCCAGCTGCTGGGCTGCCT...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCATAGAGGCTGCACCCTaGGGAGAGGAGGCCGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQIIEAAP*GEEAVP Trigger: GGGAACGGCCTCCTCTCCTCAGGGTGCAGCCTCTAT...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ACCAACCACTGTTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAGGAGTCCCGGTGTTCTaGGAGGCCTGGCGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNHCSLWAQHSHVRGLRGGVPVF*EAWRQG Trigger: CCCCTGGCGCCAGGCCTCCCAGAACACCGGGACTCC...TCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCTGCAGGTCTGGCACTTaGAAGGCCGTTCTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQICRSGT*KAVLHC Trigger: ACAGTGGAGAACGGCCTTTCAAGTGCCAGACCTGCA...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCATGACTCATAGAGGCTaGACCCTGAGGAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQIMTHRG*TLRRGG Trigger: GCCTCCTCTCCTCAGGGTGCAGCCTCTATGAGTCAT...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCTGGAACTAATGCCGTACGGTaGCAACAGGAACTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQRGAGKHPVPAELCRSGTNAVR*QQELGV Trigger: TACCCCAAGTTCCTGTTGCCACCGTACGGCATTAGT...TCCAGATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | CAAGATGCTACACACCCTCACCTCTGCACTGAGGTGCTCTGCTCTCTGGTAGTACCACGTGTTCTGACGTaGCTGCAGTTCCCGCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDATHPHLCTEVLCSLVVPRVLT*LQFPPL Trigger: CAACGGCGGGAACTGCAGCCACGTCAGAACACGTGG...TACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCCAGTTGCCCTTCAGGTaGACCTTGAGGCTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQIQLPFR*TLRLQR Trigger: TCTCTGCAGCCTCAAGGTCCACCTGAAGGGCAACTG...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTGGAGTCCCGGTGTTCTaGGAGGCCTGGCGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTGVPVF*EAWRQG Trigger: CCCCTGGCGCCAGGCCTCCCAGAACACCGGGACTCC...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCCTCTTGTGGCAGACCTaGCACTCATGTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQILLWQT*HSCGFS Trigger: AGAGAAGCCACATGAGTGCCAGGTCTGCCACAAGAG...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTAGGCAGCCCAGCAGCTaGGCCCGCAGGGCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTRQPSS*ARRAVA Trigger: GGCAACTGCCCTGCGGGCCCAGCTGCTGGGCTGCCT...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCCATTGTAAGAAGGAATaGAAGCTGGTGGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQIHCKKE*KLVGGG Trigger: CCCACCTCCCACCAGCTTTCATTCCTTCTTACAATG...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGGGATTGAGCATGGGATaGGGCAGGCTGCTGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQGLSMG*GRLLPL Trigger: TAGTGGCAGCAGCCTGCCTCATCCCATGCTCAATCC...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTCCGTGTTTCCCGGGCTaGTGTGGGGGCTGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIPCFPG*CGGWSS Trigger: AGAGCTCCAGCCCCCACAGCAGCCCGGGAAACACGG...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGCCGGGCAGAGTGAGCTaGATTCACGTAGCGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQPGRVS*IHVAHP Trigger: TGGATGCGCTACGTGAATCCAGCTCACTCTGCCCGG...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCTGTGAGTTATGTAGGTaGGTCTCTCCATCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQICELCR*VSPSHR Trigger: CCTATGGGATGGAGAGACCCACCTACATAACTCACA...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTTGCAGGTGGGCGAGCTaGGTAAAACCCTTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGCRWAS*VKPLLQ Trigger: CTGCAACAAGGGTTTTACTCAGCTCGCCCACCTGCA...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTGGTAGTGGGTTGCTGTaGGGCAACTTCATGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGGSGLL*GNFMRD Trigger: GTCCCTCATGAAGTTGCCTCACAGCAACCCACTACC...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TTAATTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCCAACTGTTTCTTGTTTaGCCTTTACAGGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPERCREAPGASGALQIQLFLV*PLQAPE Trigger: CTCTGGTGCCTGTAAAGGTCAAACAAGAAACAGTTG...GATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGCCGGAATCCCAGGGGTaGTCGTTCACTATGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLPESQG*SFTMYV Trigger: TACATACATAGTGAACGACCACCCCTGGGATTCCGG...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGCGCTGTACTCTCTCTTaGGGACACTCTTTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLRCTLS*GHSLGR Trigger: TCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCG...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACTTTCCCGGGCTGCTGTaGGGGCTGGAGCTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTTSVLYDRSSEHFPGLL*GLELLR Trigger: CCTTAAGAGCTCCAGCCCCCACAGCAGCCCGGGAAA...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | CAAGATGCTACACACCCTCACCTCTGCACTGAGGTGCTCTGCTCTCTGGTAGTAACTAATGCCGTACGGTaGCAACAGGAACTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDATHPHLCTEVLCSLVVTNAVR*QQELGV Trigger: TACCCCAAGTTCCTGTTGCCACCGTACGGCATTAGT...TACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | ACCAACCACTGTTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGGGAGAAGGCACTGTaGGGTGCTGGGATAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TNHCSLWAQHSHVRGLRGREKAL*GAGIST Trigger: GGTGCTTATCCCAGCACCCCACAGTGCCTTCTCCCT...TCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTCTGTGCACTCTCAGGTaGACCTTCAGGTTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGLCTLR*TFRLES Trigger: GCTCTCCAACCTGAAGGTCCACCTGAGAGTGCACAG...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTATGTTCATCCCGTTCTaGCAGGCAGCCAGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGMFIPF*QAARFC Trigger: GCAAAACCTGGCTGCCTGTCAGAACGGGATGAACAT...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR CAA 72 bp | CAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGCTaGCTTGCTAGCATGTGTGGAATCTCTGGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSCWGCSPVTAC*LASMCGISGFD Trigger: ATCAAAACCAGAGATTCCACACATGCTAGCAAGCAAGCAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACTGCAGGTGGGCGAGCTaGGTAAAACCCTTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTTSVLYDRSSEHCRWAS*VKPLLQ Trigger: CTGCAACAAGGGTTTTACTCAGCTCGCCCACCTGCA...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCGGCCGCTCCCGGGTATaGAGTCGCTTGTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAEFYRYNTVDALGTGMFGRSRV*SRLCSF Trigger: GAAGCTGCACAAGCGACTGCATACCCGGGAGCGGCC...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGCGCTGTACTCTCTCTTaGGGACACTCTTTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQRCTLS*GHSLGR Trigger: TCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCG...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR CAA 72 bp | TCTCAAATACAGATGCATCCAGAAATGTCAGTCTTGTaGGGGCTGCAGCCCAGTGACAGCTTGCTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQIQMHPEMSVL*GLQPSDSLLAC Trigger: GCAAGCAAGCAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATCCGTGTTTCCCGGGCTaGTGTGGGGGCTGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFACLYFKCGLSLSISNPCFPG*CGGWSS Trigger: AGAGCTCCAGCCCCCACAGCAGCCCGGGAAACACGG...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGGTATGCAGTCGCTTGTaGAGCTTCAGGTGCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQVCSRL*SFRCTN Trigger: ATTTGTGCACCTGAAGCTGCACAAGCGACTGCATAC...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGAGGCCGCTCCCGGGTATaGAGTCGCTTGTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRGRSRV*SRLCSF Trigger: GAAGCTGCACAAGCGACTGCATACCCGGGAGCGGCC...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTTTCCCGGGCTGCTGTaGGGGCTGGAGCTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPEITELSSKSQAFKQMFPGLL*GLELLR Trigger: CCTTAAGAGCTCCAGCCCCCACAGCAGCCCGGGAAA...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCACCACGTGTTCTGACGTaGCTGCAGTTCCCGCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YHRERLPEITELSSKSQAPRVLT*LQFPPL Trigger: CAACGGCGGGAACTGCAGCCACGTCAGAACACGTGG...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR CAA 72 bp | CAAAGTCATATGGCCACTCAGAATGGTCATGTGACATaGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSHMATQNGHVT*GDRLAKPSCHC Trigger: ACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGTGTCCTTTTCTAAAGTaGAGGGTGAAATGTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLCPFLK*RVKCWN Trigger: GTTCCAACATTTCACCCTTCACTTTAGAAAAGGACA...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR GCA 90 bp | CAAGATGCTACACACCCTCACCTCTGCACTGAGGTGCTCTGCTCTCTGGTAGTATTCTCACTACTGTATTaGTTTGGGTTGCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDATHPHLCTEVLCSLVVFSLLY*FGLLSV Trigger: AACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAA...TACTACCAGAGAGCAGAGCACCTCAGTGCAGAGGTGAGGGTGTGTAGCATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCCCGGGCAGAGTGAGCTaGATTCACGTAGCGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAEFYRYNTVDALGTGMFPGRVS*IHVAHP Trigger: TGGATGCGCTACGTGAATCCAGCTCACTCTGCCCGG...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCCACACAAGAAGTTCCTaGTTGGCAGGGATAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGHTRSS*LAGIGL Trigger: TAAGCCTATCCCTGCCAACCAGGAACTTCTTGTGTG...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACGCTGACCGAACGTCTTaGCACAGACATTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTTSVLYDRSSEHADRTS*HRHCTH Trigger: ATGAGTGCAATGTCTGTGCCAAGACGTTCGGTCAGC...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTCCCTTGTTGCAGGTCTaGCACTTGAAAGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIPLLQV*HLKGRS Trigger: AGAACGGCCTTTCAAGTGCCAGACCTGCAACAAGGG...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTCCATGTCCATTTTCATaGTCCCAGTCTCTGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIPCPFS*SQSLPV Trigger: GACTGGCAGAGACTGGGATCATGAAAATGGACATGG...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACATAGAGGCTGCACCCTaGGGAGAGGAGGCCGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYIEAAP*GEEAVP Trigger: GGGAACGGCCTCCTCTCCTCAGGGTGCAGCCTCTAT...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCAGGTAGTGGGTTGCTGTaGGGCAACTTCATGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHRERLPEITELSSKSQAGSGLL*GNFMRD Trigger: GTCCCTCATGAAGTTGCCTCACAGCAACCCACTACC...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAAGGCACTGTGGGGTGCTaGGATAAGCACCTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLIPALLLDTLNEVIVEGTVGC*DKHLFG Trigger: CCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGCC...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTGCTGACCGAACGTCTTaGCACAGACATTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTADRTS*HRHCTH Trigger: ATGAGTGCAATGTCTGTGCCAAGACGTTCGGTCAGC...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGCAGTTGCCCTTCAGGTaGACCTTGAGGCTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPEITELSSKSQAFKQMQLPFR*TLRLQR Trigger: TCTCTGCAGCCTCAAGGTCCACCTGAAGGGCAACTG...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| CDS-3UTR TCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAATGCAGGTCTGGCACTTaGAAGGCCGTTCTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLIPALLLDTLNEVIVECRSGT*KAVLHC Trigger: ACAGTGGAGAACGGCCTTTCAAGTGCCAGACCTGCA...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCAGTCTTCTGGCAGAGGTaGCCGGATAGGATAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YHRERLPEITELSSKSQAVFWQR*PDRINH Trigger: GTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGAC...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTTTCAGGTGCACAAATTaGGTAAACTTGGCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTFRCTN*VNLAGH Trigger: GTGCCCTGCCAAGTTTACGCAATTTGTGCACCTGAA...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ACCAACCACTGTTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGACTTGGGGACACTCTTTaGGTAGAGTTCATTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNHCSLWAQHSHVRGLRGLGDTL*VEFIFL Trigger: GAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAG...TCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGGCAACAGGAACTTaGGGTAGTGAGCATTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIVATGT*GSEHCK Trigger: CTTACAATGCTCACTACCCCAAGTTCCTGTTGCCAC...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATAGGGAGAAGGCACTGTaGGGTGCTGGGATAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLFACLYFKCGLSLSISNREKAL*GAGIST Trigger: GGTGCTTATCCCAGCACCCCACAGTGCCTTCTCCCT...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| CDS-3UTR CCA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACGAATGCAATCGAAGGTaGGTCTTGAGATTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTTSVLYDRSSEHECNRR*VLRLLV Trigger: CACAAGCAATCTCAAGACCCACCTTCGATTGCATTC...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR CAA 72 bp | AACAAACCAACCAACCAACCAACCAACCACTGTTCATaGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKPTNQPTNHCS*WAQHSHVRGLR Trigger: TCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAACAGTGGTTGGTTGGTTGGTTGGTTGGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTGGATTGAGCATGGGATaGGGCAGGCTGCTGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFGLSMG*GRLLPL Trigger: TAGTGGCAGCAGCCTGCCTCATCCCATGCTCAATCC...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTAGCACGGTTTTAAAATaGAGCCTTTGGCAAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKISTVLK*SLWQGR Trigger: ACGACCTTGCCAAAGGCTGCATTTTAAAACCGTGCT...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR GCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTCCGTGTAAAGTAGACTaGCTTGAAGAAGCACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTPCKVD*LEEARF Trigger: AAACCGTGCTTCTTCAAGGCAGTCTACTTTACACGG...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGGTTTTTCTCCAGAATaGAATCGAAGGTGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIGFSPE*NRRWVL Trigger: CAAGACCCACCTTCGATTGCATTCTGGAGAAAAACC...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| CDS-3UTR GCA 90 bp | TTATTACACCTTGAACACCAACAGGTAACCTTTGGGCTTAGGAGAATACAGGACGTATGCAGTCGCTTGTaGAGCTTCAGGTGCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHLEHQQVTFGLRRIQDVCSRL*SFRCTN Trigger: ATTTGTGCACCTGAAGCTGCACAAGCGACTGCATAC...GTCCTGTATTCTCCTAAGCCCAAAGGTTACCTGTTGGTGTTCAAGGTGTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | CAAATACAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACTCCTTTTGGAGGGATTaGAGTCCAGTTTTAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QIQMHPEMSVLLGLQPSDSFWRD*SPVLEF Trigger: AAATTCTAAAACTGGACTCCAATCCCTCCAAAAGGA...GTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACGGCACTGTGGGGTGCTaGGATAAGCACCTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYGTVGC*DKHLFG Trigger: CCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGCC...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAACCCTTGTTGCAGGTCTaGCACTTGAAAGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLIPALLLDTLNEVIVEPLLQV*HLKGRS Trigger: AGAACGGCCTTTCAAGTGCCAGACCTGCAACAAGGG...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGACTCTTGTGGCAGACCTaGCACTCATGTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRLLWQT*HSCGFS Trigger: AGAGAAGCCACATGAGTGCCAGGTCTGCCACAAGAG...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTATTACACCTTGAACACCAACAGGTAACCTTTGGGCTTAGGAGAATACAGGACCTGCTAAATCTCTTGTaGCAGACCTGGCACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHLEHQQVTFGLRRIQDLLNLL*QTWHSC Trigger: ACATGAGTGCCAGGTCTGCCACAAGAGATTTAGCAG...GTCCTGTATTCTCCTAAGCCCAAAGGTTACCTGTTGGTGTTCAAGGTGTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAACCATGTCCATTTTCATaGTCCCAGTCTCTGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTLIPALLLDTLNEVIVEPCPFS*SQSLPV Trigger: GACTGGCAGAGACTGGGATCATGAAAATGGACATGG...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTTCAGGTGCACAAATTaGGTAAACTTGGCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLPEITELSSKSQAFKQMFRCTN*VNLAGH Trigger: GTGCCCTGCCAAGTTTACGCAATTTGTGCACCTGAA...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACATGACTCATAGAGGCTaGACCCTGAGGAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYMTHRG*TLRRGG Trigger: GCCTCCTCTCCTCAGGGTGCAGCCTCTATGAGTCAT...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGACCGGAATCCCAGGGGTaGTCGTTCACTATGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRPESQG*SFTMYV Trigger: TACATACATAGTGAACGACCACCCCTGGGATTCCGG...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTCTTGGGGACACTCTTTaGGTAGAGTTCATTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKILGDTL*VEFIFL Trigger: GAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAG...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCGTGGCAACAGGAACTTaGGGTAGTGAGCATTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAEFYRYNTVDALGTGMFVATGT*GSEHCK Trigger: CTTACAATGCTCACTACCCCAAGTTCCTGTTGCCAC...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCACTGCTAAATCTCTTGTaGCAGACCTGGCACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YHRERLPEITELSSKSQALLNLL*QTWHSC Trigger: ACATGAGTGCCAGGTCTGCCACAAGAGATTTAGCAG...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | TTATTACACCTTGAACACCAACAGGTAACCTTTGGGCTTAGGAGAATACAGGACTCTCAATTTCTTCATTaGTTCGGGTCAGATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHLEHQQVTFGLRRIQDSQFLH*FGSDPP Trigger: TGGAGGATCTGACCCGAATCAATGAAGAAATTGAGA...GTCCTGTATTCTCCTAAGCCCAAAGGTTACCTGTTGGTGTTCAAGGTGTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR GCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTTTCTCACTACTGTATTaGTTTGGGTTGCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTFSLLY*FGLLSV Trigger: AACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAA...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTTTCCCCATGTTTCTTTaGAAAGACACTTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIFPMFL*KDTFRL Trigger: CAGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAA...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGACACACAAGAAGTTCCTaGTTGGCAGGGATAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRHTRSS*LAGIGL Trigger: TAAGCCTATCCCTGCCAACCAGGAACTTCTTGTGTG...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTACTACTGTATTGCTTTaGGTTGCTTTCCGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTTTVLL*VAFRLC Trigger: ACACAAACGGAAAGCAACCCAAAGCAATACAGTAGT...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTCATTGTAAGAAGGAATaGAAGCTGGTGGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFHCKKE*KLVGGG Trigger: CCCACCTCCCACCAGCTTTCATTCCTTCTTACAATG...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGACAACTGTTTCTTGTTTaGCCTTTACAGGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRQLFLV*PLQAPE Trigger: CTCTGGTGCCTGTAAAGGTCAAACAAGAAACAGTTG...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTAAAAATACTTCCTGTTaGCATTCTTGGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIKNTSC*HSWELC Trigger: ACACAGTTCCCAAGAATGCCAACAGGAAGTATTTTT...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATTGTTGGCAGCATACTTaGAAAGCAGGTTCCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLFACLYFKCGLSLSISNCWQHT*KAGSLV Trigger: TACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACA...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACTTAAAATGCAGCCTTTaGCAAGGTCGTACCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: FKQMCRNYLQRMATGQRYLKCSL*QGRTHT Trigger: CGTGTGGGTACGACCTTGCCAAAGGCTGCATTTTAA...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACTGTGAGTTATGTAGGTaGGTCTCTCCATCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYCELCR*VSPSHR Trigger: CCTATGGGATGGAGAGACCCACCTACATAACTCACA...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTTGTTGGCAGCATACTTaGAAAGCAGGTTCCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFCWQHT*KAGSLV Trigger: TACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACA...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTCCTTTTCTAAAGTaGAGGGTGAAATGTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRCPFLK*RVKCWN Trigger: GTTCCAACATTTCACCCTTCACTTTAGAAAAGGACA...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACGGTTTTTCTCCAGAATaGAATCGAAGGTGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKQMCRNYLQRMATGQRYGFSPE*NRRWVL Trigger: CAAGACCCACCTTCGATTGCATTCTGGAGAAAAACC...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATTCCCCATGTTTCTTTaGAAAGACACTTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRFPMFL*KDTFRL Trigger: CAGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAA...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAAACTACTGTATTGCTTTaGGTTGCTTTCCGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLIPALLLDTLNEVIVETTVLL*VAFRLC Trigger: ACACAAACGGAAAGCAACCCAAAGCAATACAGTAGT...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACGAATGCAATCGAAGGTaGGTCTTGAGATTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKQMCRNYLQRMATGQRYECNRR*VLRLLV Trigger: CACAAGCAATCTCAAGACCCACCTTCGATTGCATTC...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| 3UTR CAA 72 bp | CAACCCAAGTTCACTGCAAAGAAATCGTATTTGTATTaGGTGTCAATGTCAGGTCATGCTTTGGTTAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: QPKFTAKKSYLY*VSMSGHALVNL Trigger: TAGGTTAACCAAAGCATGACCTGACATTGACACCAAATACAAATACGATTTCTTTGCAGTGAACTTGGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| 3UTR CAA 72 bp | GGAAAACAACCCAAGTTCACTGCAAAGAAATCGTATTaGTATTTGGTGTCAATGTCAGGTCATGCTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKQPKFTAKKSY*YLVSMSGHALV Trigger: AACCAAAGCATGACCTGACATTGACACCAAATACAAATACGATTTCTTTGCAGTGAACTTGGGTTGTTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR TCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACTCTCAATTTCTTCATTaGTTCGGGTCAGATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKQMCRNYLQRMATGQRYSQFLH*FGSDPP Trigger: TGGAGGATCTGACCCGAATCAATGAAGAAATTGAGA...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGAAAAAATACTTCCTGTTaGCATTCTTGGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRKNTSC*HSWELC Trigger: ACACAGTTCCCAAGAATGCCAACAGGAAGTATTTTT...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACTCCTTTTGGAGGGATTaGAGTCCAGTTTTAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FKQMCRNYLQRMATGQRYSFWRD*SPVLEF Trigger: AAATTCTAAAACTGGACTCCAATCCCTCCAAAAGGA...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GGGAGGCCTGGCGCCAGGGGTGACACCGTGTTTCCCGGGCTGCTGTaGGGGCTGGAGCTCTTAAGGCTCTGCTCCGGGCTGCTGCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPGARGDTVFPGLL*GLELLRLCSGLLLA Trigger: TGCGAGCAGCAGCCCGGAGCAGAGCCTTAAGAGCTCCAGCCCCCACAGCAGCCCGGGAAACACGGTGTCACCCCTGGCGCCAGGCCTCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS TCA 90 bp | GTAGGAGTAGGAGTCCCGGTGTTCTGGGAGGCCTGGCGCCAGGGGTaGCACCGTGTTTCCCGGGCTGCTGTGGGGGCTGGAGCTCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGVGVPVFWEAWRQG*HRVSRAAVGAGALK Trigger: CTTAAGAGCTCCAGCCCCCACAGCAGCCCGGGAAACACGGTGTCACCCCTGGCGCCAGGCCTCCCAGAACACCGGGACTCCTACTCCTAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS GCA 90 bp | AGGGAGAAGGCACTGTGGGGTGCTGGGATAAGCACCTCTTTGGGGTaGTCCGGTGGAAGCAGCCTCCGGGCTCCATCGGTAGGCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: REKALWGAGISTSLG*SGGSSLRAPSVGRE Trigger: TTCCCTGCCTACCGATGGAGCCCGGAGGCTGCTTCCACCGGAGCACCCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGCCTTCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCTGGAACAGGCAGCCAGGTTTaGCTCCCGGGCAGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQRGAGKHPVPAELCRSGTGSQV*LPGRVS Trigger: GCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGT...TCCAGATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GGAGCTCTTAAGGCTCTGCTCCGGGCTGCTGCTCGCAGGGGGACTTaGAGTTGTGGAAGACGGAAGGGGACTGTGAGTTATGTAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GALKALLRAAARRGT*SCGRRKGTVSYVGG Trigger: CCCACCTACATAACTCACAGTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTGCGAGCAGCAGCCCGGAGCAGAGCCTTAAGAGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS GCA 90 bp | CATCCCATAGGCCAGGGACGCTTTCAAAAAGTCTTCTGGCAGAGGTaGCCGGATAGGATAAACCACCCGAGGGTAGAAGGGCATGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPIGQGRFQKVFWQR*PDRINHPRVEGHVG Trigger: CCCGACATGCCCTTCTACCCTCGGGTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGACTTTTTGAAAGCGTCCCTGGCCTATGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 90 bp | GGGTCTCTCCATCCCATAGGCCAGGGACGCTTTCAAAAAGTCTTCTaGCAGAGGTGCCCGGATAGGATAAACCACCCGAGGGTAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLHPIGQGRFQKVF*QRCPDRINHPRVEG Trigger: CCCTTCTACCCTCGGGTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGACTTTTTGAAAGCGTCCCTGGCCTATGGGATGGAGAGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 90 bp | CCCGTTCTGACAGGCAGCCAGGTTTTGCTCCCGGGCAGAGTGAGCTaGATTCACGTAGCGCATCCAGTTGCTTTTCTCCTCATTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVLTGSQVLLPGRVS*IHVAHPVAFLLIKA Trigger: GGCTTTAATGAGGAGAAAAGCAACTGGATGCGCTACGTGAATCCAGCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGTCAGAACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGAGGTGCAGGGAAGCACCCGGTGCCAGCGGAGCTTTGCAGATCTGGAACGCCAATAACCTCTTaGCTGTTGTTGGCAGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: FQRGAGKHPVPAELCRSGTPITS*LLLAAY Trigger: GTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGT...TCCAGATCTGCAAAGCTCCGCTGGCACCGGGTGCTTCCCTGCACCTCTCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| CDS-3UTR CAA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCACAGGCAGCCAGGTTTaGCTCCCGGGCAGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGTGSQV*LPGRVS Trigger: GCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGT...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| CDS-3UTR CAA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGCAGGGGGACTTGGAGTaGTGGAAGACGGAAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQQGDLE*WKTEGD Trigger: GTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTG...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
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| CDS-3UTR CAA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGTTGCAGGTCTGGCACTaGAAAGGCCGTTCTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLLQVWH*KGRSPL Trigger: CAGTGGAGAACGGCCTTTCAAGTGCCAGACCTGCAA...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| CDS GCA 90 bp | AGTCATATCAGCGTCCTCCATGTCCATTTTCATGATCCCAGTCTCTaGCAGTCCTTGAAACTTCACGGAGCCGGAGCTAGACTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHISVLHVHFHDPSL*QSLKLHGAGARLGG Trigger: GCCCCCAAGTCTAGCTCCGGCTCCGTGAAGTTTCAAGGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCTGATATGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS TCA 90 bp | CCTCTGTCCACAAAGTCATATCAGCGTCCTCCATGTCCATTTTCATaGTCCCAGTCTCTGCCAGTCCTTGAAACTTCACGGAGCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLSTKSYQRPPCPFS*SQSLPVLETSRSRS Trigger: GCTCCGGCTCCGTGAAGTTTCAAGGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCTGATATGACTTTGTGGACAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS-3UTR CAA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTTTGCAGGTCTGGCACTaGAAAGGCCGTTCTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGLQVWH*KGRSPL Trigger: CAGTGGAGAACGGCCTTTCAAGTGCCAGACCTGCAA...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCCCCTTCAGGTGGACCTaGAGGCTGCAGAGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGPFRWT*RLQRWM Trigger: CATCCATCTCTGCAGCCTCAAGGTCCACCTGAAGGG...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCAGGGCCCGCAGGGCAGTaGCCCTTCAGGTGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YHRERLPEITELSSKSQAGPAGQ*PFRWTL Trigger: CAAGGTCCACCTGAAGGGCAACTGCCCTGCGGGCCC...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGAGCCGGAGCTAGACTaGGGGGCAGCCAAGGTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: CDIGRQVGKAFLSLFGKIEPELD*GAAKVV Trigger: TACGACCTTGGCTGCCCCCAAGTCTAGCTCCGGCTC...AATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GACTTGGAGTTGTGGAAGACGGAAGGGGACTGTGAGTTATGTAGGTaGGTCTCTCCATCCCATAGGCCAGGGACGCTTTCAAAAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLELWKTEGDCELCR*VSPSHRPGTLSKSL Trigger: AAGACTTTTTGAAAGCGTCCCTGGCCTATGGGATGGAGAGACCCACCTACATAACTCACAGTCCCCTTCCGTCTTCCACAACTCCAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS TCA 90 bp | TCCTTGAAACTTCACGGAGCCGGAGCTAGACTTGGGGGCAGCCTTTaGACAATCCTTGGCTTTATCACTCAAGGCAGAAATGTGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKLHGAGARLGGSL*TILGFITQGRNVLW Trigger: CCACAACACATTTCTGCCTTGAGTGATAAAGCCAAGGATTGTTCAAAGGCTGCCCCCAAGTCTAGCTCCGGCTCCGTGAAGTTTCAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | CAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACAGCTTGGTCTTGGCACAGACATaGCACTCATACTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QMHPEMSVLLGLQPSDSLVLAQT*HSYLIL Trigger: CAAGATCAAGTATGAGTGCAATGTCTGTGCCAAGAC...CAAGCTGTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS GCA 90 bp | CATGGAGGTCACATCGACACTGTCCTCCATGTCCTCAAGACGGTCTaGATTGTCGCTGATGTCGAACCTCTCAATTTCTTCATTGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: HGGHIDTVLHVLKTV*IVADVEPLNFFIDS Trigger: CGAATCAATGAAGAAATTGAGAGGTTCGACATCAGCGACAATGCAGACCGTCTTGAGGACATGGAGGACAGTGTCGATGTGACCTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGCAGGGGGACTTGGAGTaGTGGAAGACGGAAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLPEITELSSKSQAFKQMQGDLE*WKTEGD Trigger: GTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTG...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | CAAATACAGATGCATCCAGAAATGTCAGTCTTGTTGGGGCTGCAGCCCAGTGACTTGTTGGCAGCATACTaGAAAAGCAGGTTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QIQMHPEMSVLLGLQPSDLLAAY*KSRFLG Trigger: ACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAA...GTCACTGGGCTGCAGCCCCAACAAGACTGACATTTCTGGATGCATCTGTATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CAA 90 bp | TGGTCATGTGACATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTACAAGAAGTTCCTGGTaGGCAGGGATAGGCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: WSCDIGRQVGKAFLSLFGTRSSW*AGIGLI Trigger: TATTAAGCCTATCCCTGCCAACCAGGAACTTCTTGT...ACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAATGTCACATGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGCACTACTGTATTGCTTaGGGTTGCTTTCCGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQHYCIA*GCFPFV Trigger: CACAAACGGAAAGCAACCCAAAGCAATACAGTAGTG...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GATGTTGTTCATGGTGCTCAAGCCATTGGAACTAATGCCGTACGGTaGCAACAGGAACTTGGGGTAGTGAGCATTGTAAGAAGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: DVVHGAQAIGTNAVR*QQELGVVSIVRRNE Trigger: TTCATTCCTTCTTACAATGCTCACTACCCCAAGTTCCTGTTGCCACCGTACGGCATTAGTTCCAATGGCTTGAGCACCATGAACAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACTTTAAAATGCAGCCTTaGGCAAGGTCGTACCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTTSVLYDRSSEHFKMQP*ARSYPH Trigger: GTGTGGGTACGACCTTGCCAAAGGCTGCATTTTAAA...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CAA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCTTCCTGTTGGCATTCTaGGGAACTGTGTCATTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGFLLAF*GTVSLV Trigger: CACTAATGACACAGTTCCCAAGAATGCCAACAGGAA...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CAA 90 bp | GGGATGCCAAAGTCATATGGCCACTCAGAATGGTCATGTGACATTGGGAGACAGTGGGTTGCTTTCCGTTaGTGTGAGATTTATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GMPKSYGHSEWSCDIGRQWVAFR*CEIYHC Trigger: ACAGTGATAAATCTCACACAAACGGAAAGCAACCCA...CTGTCTCCCAATGTCACATGACCATTCTGAGTGGCCATATGACTTTGGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TTCATTGTGGGCTCAACACTCTCATGTAAGAGGCCTAAGAGGAAGACAGATGGCGGGAAGAGGCTGAAGTaGTTGATACCATTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FIVGSTLSCKRPKRKTDGGKRLK*LIPLML Trigger: CAACATCAATGGTATCAACAACTTCAGCCTCTTCCC...GCCATCTGTCTTCCTCTTAGGCCTCTTACATGAGAGTGTTGAGCCCACAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTACGCCAATAACCTCTTaGCTGTTGTTGGCAGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTTPITS*LLLAAY Trigger: GTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGT...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACACAAGAAGTTCCTGGTaGGCAGGGATAGGCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTTSVLYDRSSEHTRSSW*AGIGLI Trigger: TATTAAGCCTATCCCTGCCAACCAGGAACTTCTTGT...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ACCCACACACACACACACACAACATCTGTGCTTTACGACAGATCTTCTGAACACCACTACTGTATTGCTTaGGGTTGCTTTCCGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTTSVLYDRSSEHHYCIA*GCFPFV Trigger: CACAAACGGAAAGCAACCCAAAGCAATACAGTAGTG...GTGTTCAGAAGATCTGTCGTAAAGCACAGATGTTGTGTGTGTGTGTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGGTGCTGCTAAATCTCTaGTGGCAGACCTGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPEITELSSKSQAFKQMVLLNL*WQTWHS Trigger: TGAGTGCCAGGTCTGCCACAAGAGATTTAGCAGCAC...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | AGGGTGAAATGTTGGAACGGTAGATGTCCTTCCTTTTGGAGGGATTaGAGTCCAGTTTTAGAATTTCTTTCACGCTGTACTCTCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVKCWNGRCPSFWRD*SPVLEFLSRCTLSW Trigger: CCAAGAGAGAGTACAGCGTGAAAGAAATTCTAAAACTGGACTCCAATCCCTCCAAAAGGAAGGACATCTACCGTTCCAACATTTCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTTTGTTGGCAGCATACTaGAAAAGCAGGTTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTLLAAY*KSRFLG Trigger: ACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAA...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTGGGAAGAGGCTGAAGTaGTTGATACCATTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTGKRLK*LIPLML Trigger: CAACATCAATGGTATCAACAACTTCAGCCTCTTCCC...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAAGTGCTGCTAAATCTCTaGTGGCAGACCTGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TTLIPALLLDTLNEVIVEVLLNL*WQTWHS Trigger: TGAGTGCCAGGTCTGCCACAAGAGATTTAGCAGCAC...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTCCCTTCAGGTGGACCTaGAGGCTGCAGAGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFPFRWT*RLQRWM Trigger: CATCCATCTCTGCAGCCTCAAGGTCCACCTGAAGGG...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAGACAGGTTGGCAAAGCCTTCCTGTCACTGTTTGGTAAAATTGTGACTCTCTCAATTTCTTCATaGATTCGGGTCAGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGRQVGKAFLSLFGKIVTLSISS*IRVRSS Trigger: GGAGGATCTGACCCGAATCAATGAAGAAATTGAGAG...AGTCACAATTTTACCAAACAGTGACAGGAAGGCTTTGCCAACCTGTCTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCAAGGTGGGTCTTGAGATaGCTTGTGCTGCTAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: YHRERLPEITELSSKSQARWVLR*LVLLNL Trigger: GAGATTTAGCAGCACAAGCAATCTCAAGACCCACCT...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAACTTCAGGTGCACAAATaGCGTAAACTTGGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTLIPALLLDTLNEVIVELQVHK*RKLGRA Trigger: TGCCCTGCCAAGTTTACGCAATTTGTGCACCTGAAG...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GACACTCTTTGGGTAGAGTTCATTTTTCTCACTACTGTATTGCTTTaGGTTGCTTTCCGTTTGTGTGAGATTTATCACTGTGAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTLWVEFIFLTTVLL*VAFRLCEIYHCELS Trigger: GGAGAGCTCACAGTGATAAATCTCACACAAACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGTTCCTGTTGGCATTCTaGGGAACTGTGTCATTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLPEITELSSKSQAFKQMFLLAF*GTVSLV Trigger: CACTAATGACACAGTTCCCAAGAATGCCAACAGGAA...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCAGTCTTGGCACAGACATaGCACTCATACTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YHRERLPEITELSSKSQAVLAQT*HSYLIL Trigger: CAAGATCAAGTATGAGTGCAATGTCTGTGCCAAGAC...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATCTTCAGGTGCACAAATaGCGTAAACTTGGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLFACLYFKCGLSLSISNLQVHK*RKLGRA Trigger: TGCCCTGCCAAGTTTACGCAATTTGTGCACCTGAAG...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCACTCTCAATTTCTTCATaGATTCGGGTCAGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YHRERLPEITELSSKSQALSISS*IRVRSS Trigger: GGAGGATCTGACCCGAATCAATGAAGAAATTGAGAG...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGAGTTTTACAGATACAATACAGTTGATGCGTTGGGGACAGGAATGTTCTGGGTTGCTTTCCGTTaGTGTGAGATTTATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAEFYRYNTVDALGTGMFWVAFR*CEIYHC Trigger: ACAGTGATAAATCTCACACAAACGGAAAGCAACCCA...GAACATTCCTGTCCCCAACGCATCAACTGTATTGTATCTGTAAAACTCAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATACTGATGAGGTAGCTTaGGGTTGTACCACGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLFACLYFKCGLSLSISNTDEVA*GCTTCS Trigger: AGAACACGTGGTACAACCCAAAGCTACCTCATCAGT...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTTGCTTGCTTGTATTTTAAGTGTGGCCTGAGCCTTTCTATATCAAATAGGTGGGTCTTGAGATaGCTTGTGCTGCTAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLFACLYFKCGLSLSISNRWVLR*LVLLNL Trigger: GAGATTTAGCAGCACAAGCAATCTCAAGACCCACCT...ATTTGATATAGAAAGGCTCAGGCCACACTTAAAATACAAGCAAGCAAAGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGATGGTTCCCCATGTTTCTTaGCAAAGACACTTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLPEITELSSKSQAFKQMVPHVS*QRHFQT Trigger: AGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAAC...CATCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TATCATAGAGAAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATCAACTGTTTCTTGTTaGACCTTTACAGGCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YHRERLPEITELSSKSQASTVSC*TFTGTR Trigger: TCTGGTGCCTGTAAAGGTCAAACAAGAAACAGTTGA...TGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTTCTCTATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGTTGCCTGAAATCACAGAGCTATCTTCTAAGTCTCAGGCATTTAAACAGACGGTTCAACTGTTTCTaGTTTGACCTTTACAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KGCLKSQSYLLSLRHLNRRFNCF*FDLYRH Trigger: GTGCCTGTAAAGGTCAAACAAGAAACAGTTGAACCG...TCTGTTTAAATGCCTGAGACTTAGAAGATAGCTCTGTGATTTCAGGCAACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 90 bp | GATTGGAGTCCAGTTTTAGAATTTCTTTCACGCTGTACTCTCTCTTaGGGACACTCTTTGGGTAGAGTTCATTTTTCTCACTACTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: DWSPVLEFLSRCTLS*GHSLGRVHFSHYCI Trigger: AATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCGTGAAAGAAATTCTAAAACTGGACTCCAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS-3UTR CAA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAATTGATACCATTGATGTaGTTCATGGTGCTCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTLIPALLLDTLNEVIVELIPLM*FMVLKP Trigger: TGGCTTGAGCACCATGAACAACATCAATGGTATCAA...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTACTGATGAGGTAGCTTaGGGTTGTACCACGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFTDEVA*GCTTCS Trigger: AGAACACGTGGTACAACCCAAAGCTACCTCATCAGT...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | ACGACATTAATTCCTGCACTCCTACTGGATACACTCAATGAGGTAATTGTTGAATCAACTGTTTCTTGTTaGACCTTTACAGGCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTLIPALLLDTLNEVIVESTVSC*TFTGTR Trigger: TCTGGTGCCTGTAAAGGTCAAACAAGAAACAGTTGA...TTCAACAATTACCTCATTGAGTGTATCCAGTAGGAGTGCAGGAATTAATGTCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACACAAATTGCGTAAACTaGGCAGGGCACACCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYTNCVN*AGHTLH Trigger: ATGTAAGGTGTGCCCTGCCAAGTTTACGCAATTTGT...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACACAAATTGCGTAAACTaGGCAGGGCACACCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: FKQMCRNYLQRMATGQRYTNCVN*AGHTLH Trigger: ATGTAAGGTGTGCCCTGCCAAGTTTACGCAATTTGT...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTCGGTTCAACTGTTTCTaGTTTGACCTTTACAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFRFNCF*FDLYRH Trigger: GTGCCTGTAAAGGTCAAACAAGAAACAGTTGAACCG...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | GTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTATACTCTTGGGGACACTCTTaGGGTAGAGTTCATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQKLSTKNGHRTKIQHLYSWGHS*GRVHFS Trigger: AGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGA...GTATAAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTTCTTGGGGACACTCTTaGGGTAGAGTTCATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFSWGHS*GRVHFS Trigger: AGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGA...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACAACATTTTTGATACCATTGATGTaGTTCATGGTGCTCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RCAEIIYKEWPQDKDTTFLIPLM*FMVLKP Trigger: TGGCTTGAGCACCATGAACAACATCAATGGTATCAA...AAATGTTGTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS-3UTR CAA 90 bp | TTTAAACAGATGTGCAGAAATTATCTACAAAGAATGGCCACAGGACAAAGATACGTTCCCCATGTTTCTTaGCAAAGACACTTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FKQMCRNYLQRMATGQRYVPHVS*QRHFQT Trigger: AGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAAC...GTATCTTTGTCCTGTGGCCATTCTTTGTAGATAATTTCTGCACATCTGTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 |
||
| CDS CCA 72 bp | GGCGCCAGGGGTGACACCGTGTTTCCCGGGCTGCTGTaGGGGCTGGAGCTCTTAAGGCTCTGCTCCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GARGDTVFPGLL*GLELLRLCSGL Trigger: CAGCCCGGAGCAGAGCCTTAAGAGCTCCAGCCCCCACAGCAGCCCGGGAAACACGGTGTCACCCCTGGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 90 bp | CCGGTAAGGGAGAAGGCACTGTGGGGTGCTGGGATAAGCACCTCTTaGGGGTGCTCCGGTGGAAGCAGCCTCCGGGCTCCATCGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVREKALWGAGISTS*GCSGGSSLRAPSVG Trigger: GCCTACCGATGGAGCCCGGAGGCTGCTTCCACCGGAGCACCCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGCCTTCTCCCTTACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS GCA 72 bp | GCACTGTGGGGTGCTGGGATAAGCACCTCTTTGGGGTaGTCCGGTGGAAGCAGCCTCCGGGCTCCATCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ALWGAGISTSLG*SGGSSLRAPSV Trigger: TACCGATGGAGCCCGGAGGCTGCTTCCACCGGAGCACCCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | CTGACGTGGCTGCAGTTCCCGCCGTTGGAGATCCGCTaGGGGGACTACTCTCGTCCTTCATGCTGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTWLQFPPLEIR*GDYSRPSCWLQ Trigger: CTGCAGCCAGCATGAAGGACGAGAGTAGTCCCCCCAGCGGATCTCCAACGGCGGGAACTGCAGCCACGTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | GAGAAGGCACTGTGGGGTGCTGGGATAAGCACCTCTTaGGGGTGCTCCGGTGGAAGCAGCCTCCGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EKALWGAGISTS*GCSGGSSLRAP Trigger: TGGAGCCCGGAGGCTGCTTCCACCGGAGCACCCCAAAGAGGTGCTTATCCCAGCACCCCACAGTGCCTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 72 bp | GCTCCGGGCTGCTGCTCGCAGGGGGACTTGGAGTTGTaGAAGACGGAAGGGGACTGTGAGTTATGTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: APGCCSQGDLEL*KTEGDCELCRW Trigger: CCACCTACATAACTCACAGTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTGCGAGCAGCAGCCCGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | ATGGCTCCGTCAGTGCTGGGGGCCGCCATCACTGATGAGGTAGCTTaGGGTTGTACCACGTGTTCTGACGTGGCTGCAGTTCCCGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: MAPSVLGAAITDEVA*GCTTCSDVAAVPAV Trigger: AACGGCGGGAACTGCAGCCACGTCAGAACACGTGGTACAACCCAAAGCTACCTCATCAGTGATGGCGGCCCCCAGCACTGACGGAGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 72 bp | AAGGCTCTGCTCCGGGCTGCTGCTCGCAGGGGGACTTaGAGTTGTGGAAGACGGAAGGGGACTGTGAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KALLRAAARRGT*SCGRRKGTVSY Trigger: ATAACTCACAGTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTGCGAGCAGCAGCCCGGAGCAGAGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 72 bp | ATCCTTGGCTTTATCACTCAAGGCAGAAATGTGTTGTaGGCGCTGCTGCGTCCTGTGTCCCGGGACGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ILGFITQGRNVL*ALLRPVSRDAR Trigger: CCGGGCGTCCCGGGACACAGGACGCAGCAGCGCCCACAACACATTTCTGCCTTGAGTGATAAAGCCAAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | TCTGCTCCGGGCTGCTGCTCGCAGGGGGACTTGGAGTaGTGGAAGACGGAAGGGGACTGTGAGTTATGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAPGCCSQGDLE*WKTEGDCELCR Trigger: CCTACATAACTCACAGTCCCCTTCCGTCTTCCACAACTCCAAGTCCCCCTGCGAGCAGCAGCCCGGAGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS TCA 72 bp | GCACCAGAGGTAGTGGGTTGCTGTGAGGCAACTTCATaGGGGACAGGTCCGATGACTCATAGAGGCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: APEVVGCCEATS*GTGPMTHRGCT Trigger: GGTGCAGCCTCTATGAGTCATCGGACCTGTCCCTCATGAAGTTGCCTCACAGCAACCCACTACCTCTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS GCA 72 bp | GGCCAGGGACGCTTTCAAAAAGTCTTCTGGCAGAGGTaGCCGGATAGGATAAACCACCCGAGGGTAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQGRFQKVFWQR*PDRINHPRVEG Trigger: CCCTTCTACCCTCGGGTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGACTTTTTGAAAGCGTCCCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 72 bp | ACAGGCAGCCAGGTTTTGCTCCCGGGCAGAGTGAGCTaGATTCACGTAGCGCATCCAGTTGCTTTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSQVLLPGRVS*IHVAHPVAFLL Trigger: GAGGAGAAAAGCAACTGGATGCGCTACGTGAATCCAGCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 72 bp | GTAGATGTTCATCCCGTTCTGACAGGCAGCCAGGTTTaGCTCCCGGGCAGAGTGAGCTGGATTCACGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VDVHPVLTGSQV*LPGRVSWIHVA Trigger: CGCTACGTGAATCCAGCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGTCAGAACGGGATGAACATCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 72 bp | TCAGTGCTGGGGGCCGCCATCACTGATGAGGTAGCTTaGGGTTGTACCACGTGTTCTGACGTGGCTGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVLGAAITDEVA*GCTTCSDVAAV Trigger: AACTGCAGCCACGTCAGAACACGTGGTACAACCCAAAGCTACCTCATCAGTGATGGCGGCCCCCAGCACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | AGCGTCCTCCATGTCCATTTTCATGATCCCAGTCTCTGCCAGTCCTaGAAACTTCACGGAGCCGGAGCTAGACTTGGGGGCAGCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVLHVHFHDPSLCQS*KLHGAGARLGGSQG Trigger: ACCTTGGCTGCCCCCAAGTCTAGCTCCGGCTCCGTGAAGTTTCAAGGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105490.3 |
||
| CDS TCA 72 bp | TTGAAAAGCAGGTTCCTTGGTAAGGATGCCTCGGCTTaGACAGAAGTACCCCCGTCAGCGCCGGAATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LKSRFLGKDASA*TEVPPSAPESQ Trigger: CTGGGATTCCGGCGCTGACGGGGGTACTTCTGTTCAAGCCGAGGCATCCTTACCAAGGAACCTGCTTTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CCA 72 bp | CATCCCATAGGCCAGGGACGCTTTCAAAAAGTCTTCTaGCAGAGGTGCCCGGATAGGATAAACCACCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HPIGQGRFQKVF*QRCPDRINHPR Trigger: CCTCGGGTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGACTTTTTGAAAGCGTCCCTGGCCTATGGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | AGCGTCCTCCATGTCCATTTTCATGATCCCAGTCTCTGCCAGTCCTaGAAACTTCACGGAGCCGGAGCTAGACTTGGGGGCAGCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLHVHFHDPSLCQS*KLHGAGARLGGSLY Trigger: GTACAAGCTGCCCCCAAGTCTAGCTCCGGCTCCGTGAAGTTTCAAGGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039174.11 |
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| CDS CAA 90 bp | AGACGGTCTGCATTGTCGCTGATGTCGAACCTCTCAATTTCTTCATaGATTCGGGTCAGATCCTCCAAAGGCAGCCCAGCAGCTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRSALSLMSNLSISS*IRVRSSKGSPAAGP Trigger: GGGCCCAGCTGCTGGGCTGCCTTTGGAGGATCTGACCCGAATCAATGAAGAAATTGAGAGGTTCGACATCAGCGACAATGCAGACCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS TCA 72 bp | CTGTGCACTCTCAGGTGGACCTTCAGGTTGGAGAGCTaGCCGAACGTCTTGGCACAGACATTGCACTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LCTLRWTFRLES*PNVLAQTLHSY Trigger: GTATGAGTGCAATGTCTGTGCCAAGACGTTCGGTCAGCTCTCCAACCTGAAGGTCCACCTGAGAGTGCACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | TTGTGGAAGACGGAAGGGGACTGTGAGTTATGTAGGTaGGTCTCTCCATCCCATAGGCCAGGGACGCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LWKTEGDCELCR*VSPSHRPGTLS Trigger: TGAAAGCGTCCCTGGCCTATGGGATGGAGAGACCCACCTACATAACTCACAGTCCCCTTCCGTCTTCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 90 bp | AGTGTAGAAGTAGATGTTCATCCCGTTCTGACAGGCAGCCAGGTTTaGCTCCCGGGCAGAGTGAGCTGGATTCACGTAGCGCATCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVEVDVHPVLTGSQV*LPGRVSWIHVAHPV Trigger: AACTGGATGCGCTACGTGAATCCAGCTCACTCTGCCCGGGAGCAAAACCTGGCTGCCTGTCAGAACGGGATGAACATCTACTTCTACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS GCA 72 bp | AGCGTCCTCCATGTCCATTTTCATGATCCCAGTCTCTaGCAGTCCTTGAAACTTCACGGAGCCGGAGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVLHVHFHDPSL*QSLKLHGAGAR Trigger: TCTAGCTCCGGCTCCGTGAAGTTTCAAGGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | ACAGAAGTACCCCCGTCAGCGCCGGAATCCCAGGGGTaGTCGTTCACTATGTATGTACACTTCTCTTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TEVPPSAPESQG*SFTMYVHFSSN Trigger: GTTTGAAGAGAAGTGTACATACATAGTGAACGACCACCCCTGGGATTCCGGCGCTGACGGGGGTACTTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS TCA 72 bp | CTTCACGGAGCCGGAGCTAGACTTGGGGGCAGCCTTTaGACAATCCTTGGCTTTATCACTCAAGGCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LHGAGARLGGSL*TILGFITQGRN Trigger: ATTTCTGCCTTGAGTGATAAAGCCAAGGATTGTTCAAAGGCTGCCCCCAAGTCTAGCTCCGGCTCCGTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | CCGGAGCTAGACTTGGGGGCAGCCTTTGAACAATCCTaGGCTTTATCACTCAAGGCAGAAATGTGTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PELDLGAAFEQS*ALSLKAEMCCG Trigger: CCCACAACACATTTCTGCCTTGAGTGATAAAGCCAAGGATTGTTCAAAGGCTGCCCCCAAGTCTAGCTCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218369.2 |
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| CDS CAA 90 bp | GAGGTCACATCGACACTGTCCTCCATGTCCTCAAGACGGTCTGCATaGTCGCTGATGTCGAACCTCTCAATTTCTTCATTGATTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVTSTLSSMSSRRSA*SLMSNLSISSLIRV Trigger: GACCCGAATCAATGAAGAAATTGAGAGGTTCGACATCAGCGACAATGCAGACCGTCTTGAGGACATGGAGGACAGTGTCGATGTGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS GCA 72 bp | CACATCGACACTGTCCTCCATGTCCTCAAGACGGTCTaGATTGTCGCTGATGTCGAACCTCTCAATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HIDTVLHVLKTV*IVADVEPLNFF Trigger: GAAGAAATTGAGAGGTTCGACATCAGCGACAATGCAGACCGTCTTGAGGACATGGAGGACAGTGTCGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | CATGGTGCTCAAGCCATTGGAACTAATGCCGTACGGTaGCAACAGGAACTTGGGGTAGTGAGCATTGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HGAQAIGTNAVR*QQELGVVSIVR Trigger: TCTTACAATGCTCACTACCCCAAGTTCCTGTTGCCACCGTACGGCATTAGTTCCAATGGCTTGAGCACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | GCATTGTCGCTGATGTCGAACCTCTCAATTTCTTCATaGATTCGGGTCAGATCCTCCAAAGGCAGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ALSLMSNLSISS*IRVRSSKGSPA Trigger: TGCTGGGCTGCCTTTGGAGGATCTGACCCGAATCAATGAAGAAATTGAGAGGTTCGACATCAGCGACAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS GCA 72 bp | CACCCTGAGGAGAGGAGGCCGTTCCCCATGTTTCTTTaGAAAGACACTTTCAGACTGGTTTCTTCTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HPEERRPFPMFL*KDTFRLVSSFS Trigger: AGAGAAAGAAGAAACCAGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAACGGCCTCCTCTCCTCAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | GGATACAACCTAGGGAAGAGGCTGAAGTTGTTGATACCATTGATGTaGTTCATGGTGCTCAAGCCATTGGAACTAATGCCGTACGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GYNLGKRLKLLIPLM*FMVLKPLELMPYGG Trigger: GCCACCGTACGGCATTAGTTCCAATGGCTTGAGCACCATGAACAACATCAATGGTATCAACAACTTCAGCCTCTTCCCTAGGTTGTATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | GGTATGTACTCCTTACTTACCACGCCAATAACCTCTTTGCTGTTGTaGGCAGCATACTTGAAAAGCAGGTTCCTTGGTAAGGATGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GMYSLLTTPITSLLL*AAYLKSRFLGKDAS Trigger: CGAGGCATCCTTACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTACATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | TTCGGTATGTACTCCTTACTTACCACGCCAATAACCTCTTTGCTGTaGTTGGCAGCATACTTGAAAAGCAGGTTCCTTGGTAAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: FGMYSLLTTPITSLL*LAAYLKSRFLGKDA Trigger: GGCATCCTTACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTACATACCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | GTTCCCTTCGGTATGTACTCCTTACTTACCACGCCAATAACCTCTTaGCTGTTGTTGGCAGCATACTTGAAAAGCAGGTTCCTTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPFGMYSLLTTPITS*LLLAAYLKSRFLGK Trigger: CTTACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTACATACCGAAGGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS TCA 72 bp | GACCGAACGTCTTGGCACAGACATTGCACTCATACTTaGTCTTGCCATTCTGTTTCTTCAGAGGGTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DRTSWHRHCTHT*SCHSVSSEGKE Trigger: TTCCTTACCCTCTGAAGAAACAGAATGGCAAGATCAAGTATGAGTGCAATGTCTGTGCCAAGACGTTCGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | CTAGGGAAGAGGCTGAAGTTGTTGATACCATTGATGTaGTTCATGGTGCTCAAGCCATTGGAACTAATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGKRLKLLIPLM*FMVLKPLELMP Trigger: CGGCATTAGTTCCAATGGCTTGAGCACCATGAACAACATCAATGGTATCAACAACTTCAGCCTCTTCCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 72 bp | TCCTTACTTACCACGCCAATAACCTCTTTGCTGTTGTaGGCAGCATACTTGAAAAGCAGGTTCCTTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLTTPITSLLL*AAYLKSRFLGK Trigger: CTTACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 72 bp | TACTCCTTACTTACCACGCCAATAACCTCTTTGCTGTaGTTGGCAGCATACTTGAAAAGCAGGTTCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: YSLLTTPITSLL*LAAYLKSRFLG Trigger: ACCAAGGAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | GGTATGTACTCCTTACTTACCACGCCAATAACCTCTTaGCTGTTGTTGGCAGCATACTTGAAAAGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GMYSLLTTPITS*LLLAAYLKSRF Trigger: GAACCTGCTTTTCAAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTACATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS TCA 72 bp | CATTTTTCCGAAAGCCATCCATGTCCTTTTCTAAAGTaGAGGGTGAAATGTTGGAACGGTAGATGTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFSESHPCPFLK*RVKCWNGRCPS Trigger: GGAAGGACATCTACCGTTCCAACATTTCACCCTTCACTTTAGAAAAGGACATGGATGGCTTTCGGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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| CDS CAA 90 bp | GAGTTCATTTTTCTCACTACTGTATTGCTTTGGGTTGCTTTCCGTTaGTGTGAGATTTATCACTGTGAGCTCTCCAGGATAAGGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EFIFLTTVLLWVAFR*CEIYHCELSRIRVV Trigger: CACTACCCTTATCCTGGAGAGCTCACAGTGATAAATCTCACACAAACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAAAAATGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 90 bp | CTTGGGGACACTCTTTGGGTAGAGTTCATTTTTCTCACTACTGTATaGCTTTGGGTTGCTTTCCGTTTGTGTGAGATTTATCACTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGDTLWVEFIFLTTV*LWVAFRLCEIYHCE Trigger: CTCACAGTGATAAATCTCACACAAACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | TTCTTTCACGCTGTACTCTCTCTTGGGGACACTCTTTaGGTAGAGTTCATTTTTCTCACTACTGTATTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FFHAVLSLGDTL*VEFIFLTTVLL Trigger: AAGCAATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCGTGAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | CCAGTTTTAGAATTTCTTTCACGCTGTACTCTCTCTTaGGGACACTCTTTGGGTAGAGTTCATTTTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PVLEFLSRCTLS*GHSLGRVHFSH Trigger: GTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCGTGAAAGAAATTCTAAAACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | AGGGTGAAATGTTGGAACGGTAGATGTCCTTCCTTTTaGAGGGATTGGAGTCCAGTTTTAGAATTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVKCWNGRCPSF*RDWSPVLEFLS Trigger: TGAAAGAAATTCTAAAACTGGACTCCAATCCCTCCAAAAGGAAGGACATCTACCGTTCCAACATTTCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | TTTCTCACTACTGTATTGCTTTGGGTTGCTTTCCGTTaGTGTGAGATTTATCACTGTGAGCTCTCCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: FLTTVLLWVAFR*CEIYHCELSRI Trigger: TATCCTGGAGAGCTCACAGTGATAAATCTCACACAAACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CAA 72 bp | TTTCTTTCACGCTGTACTCTCTCTTGGGGACACTCTTaGGGTAGAGTTCATTTTTCTCACTACTGTATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLSRCTLSWGHS*GRVHFSHYCIA Trigger: AGCAATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGAGAGAGTACAGCGTGAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
||
| CDS CCA 72 bp | TGGGTAGAGTTCATTTTTCTCACTACTGTATTGCTTTaGGTTGCTTTCCGTTTGTGTGAGATTTATCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: WVEFIFLTTVLL*VAFRLCEIYHC Trigger: ACAGTGATAAATCTCACACAAACGGAAAGCAACCCAAAGCAATACAGTAGTGAGAAAAATGAACTCTACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039174.11 ENSMUST00000105490.3 ENSMUST00000218369.2 |
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