Pregenerated sensors for PRCP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061119Ensembl transcript IDs: ENSMUST00000076052.8, ENSMUST00000207594.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTaGAGCTGCAGCGTTTTGAACCCGGCTTCTGCTTTCCCTTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: GSSPVSWTGIPHSIS*SCSVLNPASAFPFV Trigger: CACAAAAGGGAAAGCAGAAGCCGGGTTCAAAACGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR TCA 90 bp | CTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTGAGTaGGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACA | + |
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Preference number: 1 (lower is better) Translates to: LPSSLWQPSSESLTE*AHRKQPGFLDWHST Trigger: TGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR TCA 90 bp | GTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTaGGTGAGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGGCATTC | + |
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Preference number: 1 (lower is better) Translates to: VSAFFFMAAQFRITH*VSSQEAARFPGLAF Trigger: GAATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR GCA 90 bp | TCCCAACAGCTGGAAGGAGACAGAAGCAACAGGCAGGTAGGTCTCTaGCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTGAGT | + |
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Preference number: 1 (lower is better) Translates to: SQQLEGDRSNRQVGL*LLLYGSPVQNHSLS Trigger: ACTCAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCTTCCAGCTGTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAAGGAGACCTCCCTaGTGCTGGGAGAGGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGDRSNRQVGLCLLLYGSPRRPP*CWERGS Trigger: AGAGCCCCTCTCCCAGCAGCAGGGAGGTCTCCTTGG...GCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCGAGCAGTCACCTGGGTaGGATGTCTGTGCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: QAGRSLPSSLWQPSSESLEQSPG*DVCAHP Trigger: GGGGTGGGCACAGACATCCCACCCAGGTGACTGCTC...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTTTGAACCCGGCTTCTaGTTTCCCTTTTGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AARFPGLAFHILSAAAAAFEPGF*FPFCGR Trigger: CCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAA...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGCTGCTTTCCCTTTTGTaGCAGGAGTGGGGACTTACA | + |
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Preference number: 2 (lower is better) Translates to: AARFPGLAFHILSAAAAALLSLL*QEWGLT Trigger: TGTAAGTCCCCACTCCTGCCACAAAAGGGAAAGCAG...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR CAA 90 bp | TCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTTTaGAACCCGGCTTCTGCTTTCCCTTTTGTGGCAGGAGTGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: SWTGIPHSISCSCSV*NPASAFPFVAGVGT Trigger: AGTCCCCACTCCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAAACGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCGAATCACTCACTGAGTaGGCTCACAGGAAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: RRQKQQAGRSLPSSLWQPESLTE*AHRKQP Trigger: GGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATTC...GGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGAGTGGGGACTTACAATaGGCCAGAGAGACTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KQPGFLDWHSTFYQLQLQSGDLQ*ARETSA Trigger: GGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACT...CTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTGTGGGTGGGATGTCTGTaGCCACCCCTGTCACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QVGLCLLLYGSPVQNHSLWVGCL*PPLSLS Trigger: AGAGAGTGACAGGGGTGGGCACAGACATCCCACCCA...CAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTGGGTGGGATGTCTGTaGCCACCCCTGTCACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: NRQVGLCLLLYGSPVQNHWVGCL*PPLSLS Trigger: AGAGAGTGACAGGGGTGGGCACAGACATCCCACCCA...GTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCAGCAGCCCGGTTTCCTaGACTGGCATTCCACATTCT | + |
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Preference number: 2 (lower is better) Translates to: QAGRSLPSSLWQPSSESLSSPVS*TGIPHS Trigger: AGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCT...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCACCTGGGTGGGATGTCTGTGCCCACCCCTGTCACTCTCTTGTGTCTTGGCTTACATAAAAGTGAATaGGTATGTGGGTGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SHLGGMSVPTPVTLLCLGLHKSE*VCGWRE Trigger: TTCCCTCCACCCACATACCCATTCACTTTTATGTAA...GCCAAGACACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACCCAGGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR CAA 90 bp | AGCAGTCACCTGGGTGGGATGTCTGTGCCCACCCCTGTCACTCTCTaGTGTCTTGGCCTTGGCTCAACAAATATAATGACAAATGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSHLGGMSVPTPVTL*CLGLGSTNIMTNER Trigger: TCTCTCATTTGTCATTATATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACCCAGGTGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTTTGAACCCGGCTTCTaGTTTCCCTTTTGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NRQVGLCLLLYGSPVQNHFEPGF*FPFCGR Trigger: CCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAA...GTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACTGTAAGAACTGCTTCAAGTTCCAAGCCTTGGAGATGGGAAGGCTCTGACAGGCAGGTAGGTCTCTaGCTTCTTCTTTATGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTVRTASSSKPWRWEGSDRQVGL*LLLYGS Trigger: GCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCT...GTCAGAGCCTTCCCATCTCCAAGGCTTGGAACTTGAAGCAGTTCTTACAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGCACTTTTCCTAAATTGGCAGAATGTAGCCAGACCACCATAAAATTGGCCAGACCTCCCTGCTGCTaGGAGAGGGGCTCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSTFPKLAECSQTTIKLARPPCC*ERGSPS Trigger: AGAGGGAGAGCCCCTCTCCCAGCAGCAGGGAGGTCT...GGCCAATTTTATGGTGGTCTGGCTACATTCTGCCAATTTAGGAAAAGTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCTGGAAACGTTCAAGTTCCAAGCCTTaGAGATGGGAAGGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RLCPSEVWIQPYFLGWKRSSSKP*RWEGSD Trigger: GTCAGAGCCTTCCCATCTCCAAGGCTTGGAACTTGA...ACGTTTCCAGCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCTGTTAGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCCCACATTCTATCAGCTaGAGCTGCAGCGTTTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: EPVRLCPSEVWIQPYFLGPHSIS*SCSVLN Trigger: GTTCAAAACGCTGCAGCTGCAGCTGATAGAATGTGG...GCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCTAACAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCCACTCTCTTGTGTCTTaGCCTTGGCTCAACAAATAT | + |
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Preference number: 2 (lower is better) Translates to: RRQKQQAGRSLPSSLWQPHSLVS*PWLNKY Trigger: ATATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTG...GGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | AATCACTCACTGAGTGAGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGGCATTCACTCTCTTGTGTCTTaGCCTTGGCTCAACAAATAT | + |
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Preference number: 2 (lower is better) Translates to: NHSLSELTGSSPVSWTGIHSLVS*PWLNKY Trigger: ATATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTG...AATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGTTAGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCGCACTTTTCCTAAATTaGCAGAATGTAGCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: EPVRLCPSEVWIQPYFLGALFLN*QNVARP Trigger: TGGTCTGGCTACATTCTGCCAATTTAGGAAAAGTGC...GCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCTAACAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCTGGAAACGTTTACATAAAAGTGAATaGGTATGTGGGTGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RLCPSEVWIQPYFLGWKRLHKSE*VCGWRE Trigger: TTCCCTCCACCCACATACCCATTCACTTTTATGTAA...ACGTTTCCAGCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| 3UTR GCA 72 bp | AGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCCCTaGTGCTGGGAGAGGGGCTCTCCCTCTGGTGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: RETSASEPRRPP*CWERGSPSGER Trigger: CCTTTCACCAGAGGGAGAGCCCCTCTCCCAGCAGCAGGGAGGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR CCA 72 bp | GACACAAAGACAGTGAGGCCGGAGCAGTCACCTGGGTaGGATGTCTGTGCCCACCCCTGTCACTCTCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: DTKTVRPEQSPG*DVCAHPCHSLV Trigger: CACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACCCAGGTGACTGCTCCGGCCTCACTGTCTTTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR CCA 72 bp | TCACTGAGTGAGCTCACAGGAAGCAGCCCGGTTTCCTaGACTGGCATTCCACATTCTATCAGCTGCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SLSELTGSSPVS*TGIPHSISCSC Trigger: GCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR TCA 72 bp | TCTTTATGGCAGCCCAGTTCAGAATCACTCACTGAGTaGGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: SLWQPSSESLTE*AHRKQPGFLDW Trigger: CCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATTCTGAACTGGGCTGCCATAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CAA 90 bp | GGACAAGGCCAGATTCCTTCCTGGCAGTACCACAGTGGCAAATGTCCCAGAAGTCTTCTGCTTTCCCTTTaGTGGCAGGAGTGGGGACTT | + |
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Preference number: 3 (lower is better) Translates to: GQGQIPSWQYHSGKCPRSLLLSL*WQEWGL Trigger: AAGTCCCCACTCCTGCCACAAAAGGGAAAGCAGAAG...ACTTCTGGGACATTTGCCACTGTGGTACTGCCAGGAAGGAATCTGGCCTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR CCA 72 bp | TGCTTTCCCTTTTGTGGCAGGAGTGGGGACTTACAATaGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CFPFCGRSGDLQ*ARETSASEPRR Trigger: TCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTCCTGCCACAAAAGGGAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCCTTCTGCTTTCCCTTTaGTGGCAGGAGTGGGGACTT | + |
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Preference number: 3 (lower is better) Translates to: QAGRSLPSSLWQPSSESLLLLSL*WQEWGL Trigger: AAGTCCCCACTCCTGCCACAAAAGGGAAAGCAGAAG...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGGGACTTACAATGGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCACTCTCTTGTGTCTaGGCCTTGGCTCAACAAATA | + |
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Preference number: 3 (lower is better) Translates to: EWGLTMGQRDFSLRTKETSLSCV*ALAQQI Trigger: TATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTGA...GGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR TCA 72 bp | TTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTaGGTGAGCTCACAGGAAGCAGCCCGGTTTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: FFFMAAQFRITH*VSSQEAARFPG Trigger: TCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCTCACTCTCTTGTGTCTaGGCCTTGGCTCAACAAATA | + |
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Preference number: 3 (lower is better) Translates to: SELTGSSPVSWTGIPHSISLSCV*ALAQQI Trigger: TATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTGA...GATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTGTAAGAACTGCTTCAAGTTCCAAGCCTTGGAGATGGGAAGGCTCTGACCAGACCACCATAAAATaGGCCTTGGAAACAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LTVRTASSSKPWRWEGSDQTTIK*ALETKR Trigger: TCTCTTTGTTTCCAAGGCCAATTTTATGGTGGTCTG...GTCAGAGCCTTCCCATCTCCAAGGCTTGGAACTTGAAGCAGTTCTTACAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| CDS-3UTR GCA 90 bp | GAGACTTCAGCCTCAGAACCAAGGAGACCTCCCTGCTGCTGGGAGAGGGGCTCTACCAGGCTGCAAGCATaGCACCATAAGAGCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: ETSASEPRRPPCCWERGSTRLQA*HHKSPR Trigger: TCGGGGGCTCTTATGGTGGCATGCTTGCAGCCTGGT...AGAGCCCCTCTCCCAGCAGCAGGGAGGTCTCCTTGGTTCTGAGGCTGAAGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR TCA 90 bp | AGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCCCTGCTGCTGGGAGAGGGGCGAGGATACTTCATCCTaGACCAGGCTGCAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: RETSASEPRRPPCCWERGEDTSS*TRLQAC Trigger: GCATGCTTGCAGCCTGGTTCAGGATGAAGTATCCTC...GCCCCTCTCCCAGCAGCAGGGAGGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGGGACTTACAATGGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCCAGCAGGGTCGGGTGTaGGACTGGCTGACAAATGCG | + |
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Preference number: 4 (lower is better) Translates to: EWGLTMGQRDFSLRTKETQQGRV*DWLTNA Trigger: CGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTG...GGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCCCACCAGGGTGTCTGTaGTGTCTCTGGTTACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSSPVSWTGIPHSISCSCPPGCL*CLWLLH Trigger: GTGGAGTAACCAGAGACATCACAGACACCCTGGTGG...GCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR CCA 90 bp | GGACAAGGCCAGATTCCTTCCTGGCAGTACCACAGTGGCAAATGTCCCAGAAGTCAGCAGGGTCGGGTGTaGGACTGGCTGACAAATGCG | + |
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Preference number: 4 (lower is better) Translates to: GQGQIPSWQYHSGKCPRSQQGRV*DWLTNA Trigger: CGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTG...ACTTCTGGGACATTTGCCACTGTGGTACTGCCAGGAAGGAATCTGGCCTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCCACCAGGGTGTCTGTaGTGTCTCTGGTTACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KQPGFLDWHSTFYQLQLQPPGCL*CLWLLH Trigger: GTGGAGTAACCAGAGACATCACAGACACCCTGGTGG...CTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAAGGGTAGTTCACCATaGCCAGGTTCACCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSPVSWTGIPHSISCSCKGSSP*PGSPRS Trigger: AGACCTGGGTGAACCTGGCCATGGTGAACTACCCTT...GCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGAGCCAGAGCCTGTTCTaGTGTCAGGAAATTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AARFPGLAFHILSAAAAASQSLF*CQEIQV Trigger: CACTTGAATTTCCTGACATCAGAACAGGCTCTGGCT...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR GCA 90 bp | GAAGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCGGACTGGCTGACAAATaGGGGCTGCCGAGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGDRSNRQVGLCLLLYGSGLADK*GLPRVF Trigger: AAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCC...GCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCTGGAAACGTGGACTGGCTGACAAATaGGGGCTGCCGAGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLCPSEVWIQPYFLGWKRGLADK*GLPRVF Trigger: AAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCC...ACGTTTCCAGCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACACCAGGCTGCAAGCATaGCACCATAAGAGCCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NRQVGLCLLLYGSPVQNHTRLQA*HHKSPR Trigger: TCGGGGGCTCTTATGGTGGCATGCTTGCAGCCTGGT...GTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| 3UTR CAA 72 bp | GGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTTTaGAACCCGGCTTCTGCTTTCCCTTTTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GIPHSISCSCSV*NPASAFPFVAG Trigger: TCCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAAACGCTGCAGCTGCAGCTGATAGAATGTGGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTTCGAAGTAAAGAACTaGGTATTTACGGGCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AARFPGLAFHILSAAAAAFEVKN*VFTGYS Trigger: GCTGTAGCCCGTAAATACTCAGTTCTTTACTTCGAA...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | AGTCACCTGGGTGGGATGTCTGTGCCCACCCCTGTCACTCTCTTGTGTCTTGGCTTCGAAGTAAAGAACTaGGTATTTACGGGCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLGGMSVPTPVTLLCLGFEVKN*VFTGYS Trigger: GCTGTAGCCCGTAAATACTCAGTTCTTTACTTCGAA...GCCAAGACACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACCCAGGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGGACTTACAATGGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCAGCCAGAGCCTGTTCTaGTGTCAGGAAATTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EWGLTMGQRDFSLRTKETSQSLF*CQEIQV Trigger: CACTTGAATTTCCTGACATCAGAACAGGCTCTGGCT...GGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAACCCGGCTTCTGCTTTCCCTTTTGTGGCAGGAGTGGGGACTTACAATGGAAGGGTAGTTCACCATaGCCAGGTTCACCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FEPGFCFPFCGRSGDLQWKGSSP*PGSPRS Trigger: AGACCTGGGTGAACCTGGCCATGGTGAACTACCCTT...CCATTGTAAGTCCCCACTCCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACCATACCATCAAGCTaGCAGATAGGGGCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRSLPSSLWQPSSESLTIPSS*QIGAEA Trigger: AGCTTCTGCCCCTATCTGGCAGCTTGATGGTATGGT...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGGACTTACAATGGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCAGCAAACCCAAAGTaGTCAACCTTCTGTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EWGLTMGQRDFSLRTKETSANPK*STFCSK Trigger: CTTCGAACAGAAGGTTGACCACTTTGGGTTTGCTGA...GGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGATGTCTGTGCCCACCCCTGTCACTCTCTTGTGTCTTGGCCTTGGCTCATATACACTCAGAGCTTaGAAAATATTCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGMSVPTPVTLLCLGLGSYTLRA*KIFCSS Trigger: GCTGCTGCAGAATATTTTCCAAGCTCTGAGTGTATA...TGAGCCAAGGCCAAGACACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| 3UTR CAA 72 bp | CTGGGTGGGATGTCTGTGCCCACCCCTGTCACTCTCTaGTGTCTTGGCCTTGGCTCAACAAATATAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGGMSVPTPVTL*CLGLGSTNIMT Trigger: TGTCATTATATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTGACAGGGGTGGGCACAGACATCCCACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCTGTCACTCTCTTGTGTCTTGGCCTTGGCTCAACAAATATAATGACAGAGGATACTTCATCCTaGACCAGGCTGCAAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPVTLLCLGLGSTNIMTEDTSS*TRLQAC Trigger: GCATGCTTGCAGCCTGGTTCAGGATGAAGTATCCTC...TGTCATTATATTTGTTGAGCCAAGGCCAAGACACAAGAGAGTGACAGGGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTTTGCGGATACTTTCTaGACAATAAGGACCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AARFPGLAFHILSAAAAAFADTF*TIRTTF Trigger: AAAAGTGGTCCTTATTGTTCAGAAAGTATCCGCAAA...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGGACTTACAATGGGCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCGCATGCTGCTTGGCCTaGATAGTTATAATATACACT | + |
|
Preference number: 4 (lower is better) Translates to: EWGLTMGQRDFSLRTKETACCLA*IVIIYT Trigger: AGTGTATATTATAACTATTCAGGCCAAGCAGCATGC...GGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGCCCATTGTAAGTCCCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | GGACAAGGCCAGATTCCTTCCTGGCAGTACCACAGTGGCAAATGTCCCAGAAGTAGGAAATTCAAGTGTTaGGAATCCTTGAAGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGQIPSWQYHSGKCPRSRKFKC*ESLKES Trigger: GGACTCCTTCAAGGATTCCCAACACTTGAATTTCCT...ACTTCTGGGACATTTGCCACTGTGGTACTGCCAGGAAGGAATCTGGCCTTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCAGCAAACCCAAAGTaGTCAACCTTCTGTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRQVGLCLLLYGSPVQNHSANPK*STFCSK Trigger: CTTCGAACAGAAGGTTGACCACTTTGGGTTTGCTGA...GTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCGGATTTTTCAAATATTaGCACACCTCCTTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRSLPSSLWQPSSESLGFFKY*HTSLMG Trigger: GCCCATCAAGGAGGTGTGCCAATATTTGAAAAATCC...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAACCCGGCTTCTGCTTTCCCTTTTGTGGCAGGAGTGGGGACTTACAATGGAGTGTAGAAAAGTATTaGTCCACCATTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEPGFCFPFCGRSGDLQWSVEKY*STISLP Trigger: TGGCAGAGAAATGGTGGATCAATACTTTTCTACACT...CCATTGTAAGTCCCCACTCCTGCCACAAAAGGGAAAGCAGAAGCCGGGTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCGCATGCTGCTTGGCCTaGATAGTTATAATATACACT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRSLPSSLWQPSSESLACCLA*IVIIYT Trigger: AGTGTATATTATAACTATTCAGGCCAAGCAGCATGC...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | GAACCTGTTAGGCTGTGTCCCTCGGAGGTTTGGATTCAACCTTATTTCCTAGGCGGATTTTTCAAATATTaGCACACCTCCTTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPVRLCPSEVWIQPYFLGGFFKY*HTSLMG Trigger: GCCCATCAAGGAGGTGTGCCAATATTTGAAAAATCC...GCCTAGGAAATAAGGTTGAATCCAAACCTCCGAGGGACACAGCCTAACAGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
||
| 3UTR CAA 72 bp | CCTAAATTGGCAGAATGTAGCCAGACCACCATAAAATaGGCCTTGGAAACAAAGAGAGCAGGACAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKLAECSQTTIK*ALETKRAGQGQ Trigger: CTGGCCTTGTCCTGCTCTCTTTGTTTCCAAGGCCAATTTTATGGTGGTCTGGCTACATTCTGCCAATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CCA 90 bp | ACACACCTGATGCTAGGAATCCAGACACCTAAGGCTATAATGATACTGGTAACATATACACTCAGAGCTTaGAAAATATTCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THLMLGIQTPKAIMILVTYTLRA*KIFCSS Trigger: GCTGCTGCAGAATATTTTCCAAGCTCTGAGTGTATA...TGTTACCAGTATCATTATAGCCTTAGGTGTCTGGATTCCTAGCATCAGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
||
| CDS GCA 90 bp | TATTTACGGGCTACAGCAGGGTCGGGTGTGGGACTGGCTGACAAATaGGGGCTGCCGAGGGTCTTTAGCCTAGGCGGGATGGTTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YLRATAGSGVGLADK*GLPRVFSLGGMVVA Trigger: CGCCACAACCATCCCGCCTAGGCTAAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTGTAGCCCGTAAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCCCTGCTGCTGGGAGAGGGATGGCGATGACAGGTaGACCTTGAGCTCCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ARETSASEPRRPPCCWERDGDDR*TLSSWD Trigger: ATCCCAGGAGCTCAAGGTCAACCTGTCATCGCCATC...CCTCTCCCAGCAGCAGGGAGGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS TCA 90 bp | AGCACAGAGGAAGGATCGAAGGCGTTGTGGGCTCGGAGATCTAAATaGTGGGCCCCGTCATGGATGTTGATAGCCACCAGGGTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: STEEGSKALWARRSK*WAPSWMLIATRVSV Trigger: CACAGACACCCTGGTGGCTATCAACATCCATGACGGGGCCCATCATTTAGATCTCCGAGCCCACAACGCCTTCGATCCTTCCTCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS GCA 90 bp | CACCTCCTTGATGGGCCAAGCAGGCAAAGGCTGCAAAAAGTTGCATaGGTAAGGGTAGTTCACCATGGCCAGGTTCACCCAGGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLLDGPSRQRLQKVA*VRVVHHGQVHPGLS Trigger: GCTGAGACCTGGGTGAACCTGGCCATGGTGAACTACCCTTACGCATGCAACTTTTTGCAGCCTTTGCCTGCTTGGCCCATCAAGGAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGAGACTTCAGCCTCAGAACCAAGGAGACCTCCCTGCTGCTGGGAGAGGAGGATTTTTCAAATATaGGCACACCTCCTTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARETSASEPRRPPCCWERRIFQI*AHLLDG Trigger: CCCATCAAGGAGGTGTGCCAATATTTGAAAAATCCT...CCTCTCCCAGCAGCAGGGAGGTCTCCTTGGTTCTGAGGCTGAAGTCTCTCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCGAAGGATCGAAGGCGTaGTGGGCTCGGAGATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAGRSLPSSLWQPSSESLEGSKA*WARRSK Trigger: TTTAGATCTCCGAGCCCACAACGCCTTCGATCCTTC...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGCGTGGTTAAAACAGTCATaGGAATACTTCTCCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AARFPGLAFHILSAAAAAWLKQS*EYFSKS Trigger: GGACTTGGAGAAGTATTCCAATGACTGTTTTAACCA...CGCTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS TCA 90 bp | TCAATACCATTAGTACAAAAGGGCATGACCATTTCTGTGCAGGCCTaGAAGCTCCAGCCCATGGAGCCCAGACTGCTCGTAGTCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIPLVQKGMTISVQA*KLQPMEPRLLVVVC Trigger: ACAAACGACTACGAGCAGTCTGGGCTCCATGGGCTGGAGCTTTCAGGCCTGCACAGAAATGGTCATGCCCTTTTGTACTAATGGTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCATATACACTCAGAGCTaGGAAAATATTCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSPVSWTGIPHSISCSCIYTQS*ENILQQ Trigger: CTGCTGCAGAATATTTTCCAAGCTCTGAGTGTATAT...GCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCTGGTTAAAACAGTCATaGGAATACTTCTCCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPVSWTGIPHSISCSCWLKQS*EYFSKS Trigger: GGACTTGGAGAAGTATTCCAATGACTGTTTTAACCA...GCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCCGGTTTCCTGGACTGGCATTCCACATTCTATCAGCTGCAGCTGCAGGGGTCTAACTCACCATaGCTGAAAATGATGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQPGFLDWHSTFYQLQLQGSNSP*LKMMFE Trigger: CTCAAACATCATTTTCAGCAATGGTGAGTTAGACCC...CTGCAGCTGCAGCTGATAGAATGTGGAATGCCAGTCCAGGAAACCGGGCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS CCA 90 bp | CAGGCAAAGGCTGCAAAAAGTTGCATGCGTAAGGGTAGTTCACCATaGCCAGGTTCACCCAGGTCTCAGCTATCCATCCTTTTAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QAKAAKSCMRKGSSP*PGSPRSQLSILLKL Trigger: CAACTTTAAAAGGATGGATAGCTGAGACCTGGGTGAACCTGGCCATGGTGAACTACCCTTACGCATGCAACTTTTTGCAGCCTTTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCCAGTGTAGAAAAGTATaGATCCACCATTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRQKQQAGRSLPSSLWQPQCRKV*IHHFSA Trigger: GGCAGAGAAATGGTGGATCAATACTTTTCTACACTG...GGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | AATCACTCACTGAGTGAGCTCACAGGAAGCAGCCCGGTTTCCTGGACTGGCATTCAGTGTAGAAAAGTATaGATCCACCATTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NHSLSELTGSSPVSWTGIQCRKV*IHHFSA Trigger: GGCAGAGAAATGGTGGATCAATACTTTTCTACACTG...AATGCCAGTCCAGGAAACCGGGCTGCTTCCTGTGAGCTCACTCAGTGAGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCCAGGAAATTCAAGTGTaGGGAATCCTTGAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAGRSLPSSLWQPSSESLQEIQV*GILEGV Trigger: GACTCCTTCAAGGATTCCCAACACTTGAATTTCCTG...GAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGACAGAAGCAACAGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCAGGAAATTCAAGTGTaGGGAATCCTTGAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGDRSNRQVGLCLLLYGSQEIQV*GILEGV Trigger: GACTCCTTCAAGGATTCCCAACACTTGAATTTCCTG...GCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCTGTTGCTTCTGTCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS TCA 90 bp | CCTTTTAAAGTTGGGATTTTCTCAGAAGTCAAGGGACTACATAGGTaGAGAATGTTCGTGAGCGACTGGAGACCACTGCCACAGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PFKVGIFSEVKGLHR*RMFVSDWRPLPQGT Trigger: GGTTCCCTGTGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAACTTTAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | GGACAAGGCCAGATTCCTTCCTGGCAGTACCACAGTGGCAAATGTCCCAGAAGTATATACACTCAGAGCTaGGAAAATATTCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGQIPSWQYHSGKCPRSIYTQS*ENILQQ Trigger: CTGCTGCAGAATATTTTCCAAGCTCTGAGTGTATAT...ACTTCTGGGACATTTGCCACTGTGGTACTGCCAGGAAGGAATCTGGCCTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS TCA 90 bp | CCTTTTAAAGTTGGGATTTTCTCAGAAGTCAAGGGACTACATAGGTaGAGAATGTTCGTGAGCGACTGGAGACCACTGCCTGAACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFKVGIFSEVKGLHR*RMFVSDWRPLPEPE Trigger: CTCAGGTTCAGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAACTTTAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTGAGGATTTTTCAAATATaGGCACACCTCCTTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVGLCLLLYGSPVQNHSLRIFQI*AHLLDG Trigger: CCCATCAAGGAGGTGTGCCAATATTTGAAAAATCCT...CAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCACTGTCCATCCTTTTAAAGTaGGGATTTTCTCAGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: QVGLCLLLYGSPVQNHSLSILLK*GFSQKS Trigger: TGACTTCTGAGAAAATCCCAACTTTAAAAGGATGGA...CAGTGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGGTAGGTCTCTGCCTTCTTCTTTATGGCAGCCCAGTTCAGAATCACTCATCCATCCTTTTAAAGTaGGGATTTTCTCAGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RQVGLCLLLYGSPVQNHSSILLK*GFSQKS Trigger: TGACTTCTGAGAAAATCCCAACTTTAAAAGGATGGA...TGAGTGATTCTGAACTGGGCTGCCATAAAGAAGAAGGCAGAGACCTACCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS-3UTR CAA 90 bp | CATGTATTTAAAGAGAGCAAGGTGGGGTATATGGGACAATTTAAAGGGAGGAAAGAAGGATCGAAGGCGTaGTGGGCTCGGAGATCTAAA | + |
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Preference number: 5 (lower is better) Translates to: HVFKESKVGYMGQFKGRKEGSKA*WARRSK Trigger: TTTAGATCTCCGAGCCCACAACGCCTTCGATCCTTC...TTTCCTCCCTTTAAATTGTCCCATATACCCCACCTTGCTCTCTTTAAATACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| CDS-3UTR CAA 90 bp | ACACACCTGATGCTAGGAATCCAGACACCTAAGGCTATAATGATACTGGTAACAGGGTCTAACTCACCATaGCTGAAAATGATGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: THLMLGIQTPKAIMILVTGSNSP*LKMMFE Trigger: CTCAAACATCATTTTCAGCAATGGTGAGTTAGACCC...TGTTACCAGTATCATTATAGCCTTAGGTGTCTGGATTCCTAGCATCAGGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| CDS GCA 72 bp | GCTACAGCAGGGTCGGGTGTGGGACTGGCTGACAAATaGGGGCTGCCGAGGGTCTTTAGCCTAGGCGGGATG | + |
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Preference number: 6 (lower is better) Translates to: ATAGSGVGLADK*GLPRVFSLGGM Trigger: CATCCCGCCTAGGCTAAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS CCA 72 bp | AGTATTTACGGGCTACAGCAGGGTCGGGTGTGGGACTaGCTGACAAATGCGGGCTGCCGAGGGTCTTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: SIYGLQQGRVWD*LTNAGCRGSLA Trigger: GGCTAAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTGTAGCCCGTAAATACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | GAAGGATCGAAGGCGTTGTGGGCTCGGAGATCTAAATaGTGGGCCCCGTCATGGATGTTGATAGCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: EGSKALWARRSK*WAPSWMLIATR Trigger: CCTGGTGGCTATCAACATCCATGACGGGGCCCATCATTTAGATCTCCGAGCCCACAACGCCTTCGATCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS GCA 72 bp | GATGGGCCAAGCAGGCAAAGGCTGCAAAAAGTTGCATaGGTAAGGGTAGTTCACCATGGCCAGGTTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: DGPSRQRLQKVA*VRVVHHGQVHP Trigger: TGGGTGAACCTGGCCATGGTGAACTACCCTTACGCATGCAACTTTTTGCAGCCTTTGCCTGCTTGGCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | TTAGTACAAAAGGGCATGACCATTTCTGTGCAGGCCTaGAAGCTCCAGCCCATGGAGCCCAGACTGCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LVQKGMTISVQA*KLQPMEPRLLV Trigger: TACGAGCAGTCTGGGCTCCATGGGCTGGAGCTTTCAGGCCTGCACAGAAATGGTCATGCCCTTTTGTACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | CAGAAGTCAAGGGACTACATAGGTGAAGAATGTTCGTaGGCGACTGGAGACCACTGCCACAGGGAACCATAC | + |
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Preference number: 6 (lower is better) Translates to: QKSRDYIGEECS*ATGDHCHREPY Trigger: GTATGGTTCCCTGTGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207594.2 |
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| CDS CCA 72 bp | GCTGCAAAAAGTTGCATGCGTAAGGGTAGTTCACCATaGCCAGGTTCACCCAGGTCTCAGCTATCCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: AAKSCMRKGSSP*PGSPRSQLSIL Trigger: AAGGATGGATAGCTGAGACCTGGGTGAACCTGGCCATGGTGAACTACCCTTACGCATGCAACTTTTTGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | CAGAAGTCAAGGGACTACATAGGTGAAGAATGTTCGTaGGCGACTGGAGACCACTGCCTGAACCTGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: QKSRDYIGEECS*ATGDHCLNLRV Trigger: AACTCTCAGGTTCAGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| CDS TCA 72 bp | GTTGGGATTTTCTCAGAAGTCAAGGGACTACATAGGTaGAGAATGTTCGTGAGCGACTGGAGACCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VGIFSEVKGLHR*RMFVSDWRPLP Trigger: AGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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| CDS TCA 72 bp | GTTGGGATTTTCTCAGAAGTCAAGGGACTACATAGGTaGAGAATGTTCGTGAGCGACTGGAGACCACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGIFSEVKGLHR*RMFVSDWRPLP Trigger: TGGCAGTGGTCTCCAGTCGCTCACGAACATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207594.2 |
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| CDS CCA 72 bp | TTTGCCACCGTACATGGTAGTCATCCAATGAGGCCGTaGTTTCACTCCCCACTGGTTAAAACAGTCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: FATVHGSHPMRP*FHSPLVKTVIG Trigger: TCCAATGACTGTTTTAACCAGTGGGGAGTGAAACCACGGCCTCATTGGATGACTACCATGTACGGTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS CAA 90 bp | CCATGGCCAGGTTCACCCAGGTCTCAGCTATCCATCCTTTTAAAGTaGGGATTTTCTCAGAAGTCAAGGGACTACATAGGTGAAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: PWPGSPRSQLSILLK*GFSQKSRDYIGEEC Trigger: ACATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAACTTTAAAAGGATGGATAGCTGAGACCTGGGTGAACCTGGCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS CAA 72 bp | CAGCACTGTATCCGATACATTAGGATTTTTCAAATATaGGCACACCTCCTTGATGGGCCAAGCAGGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QHCIRYIRIFQI*AHLLDGPSRQR Trigger: CCTTTGCCTGCTTGGCCCATCAAGGAGGTGTGCCAATATTTGAAAAATCCTAATGTATCGGATACAGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | GACAATGTCCCCTTCGTTACCAGTGTAGAAAAGTATTaGTCCACCATTTCTCTGCCAGTGTTTATCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: DNVPFVTSVEKY*STISLPVFISD Trigger: GTCGCTGATAAACACTGGCAGAGAAATGGTGGATCAATACTTTTCTACACTGGTAACGAAGGGGACATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS CAA 72 bp | AGACAATGTCCCCTTCGTTACCAGTGTAGAAAAGTATaGATCCACCATTTCTCTGCCAGTGTTTATCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: RQCPLRYQCRKV*IHHFSASVYQR Trigger: TCGCTGATAAACACTGGCAGAGAAATGGTGGATCAATACTTTTCTACACTGGTAACGAAGGGGACATTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076052.8 ENSMUST00000207594.2 |
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| CDS TCA 72 bp | TTTGTCAATGACATTCCAGGATTTGCGGATACTTTCTaGACAATAAGGACCACTTTTCCTGAAATCGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: FVNDIPGFADTF*TIRTTFPEIVS Trigger: ACTAACGATTTCAGGAAAAGTGGTCCTTATTGTTCAGAAAGTATCCGCAAATCCTGGAATGTCATTGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076052.8 |
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