Pregenerated sensors for PRAMEL51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066027Ensembl transcript IDs: ENSMUST00000071580.8, ENSMUST00000220521.2, ENSMUST00000221884.2, ENSMUST00000222081.2, ENSMUST00000222391.2, ENSMUST00000222556.2, ENSMUST00000223172.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCATCAGTGAAGGCCTCCTCAAAAATTACTGGGAACAGACTCTaGGGCAGGTCCGTGAGAGCAGAAATGGCTAAGGCCTCATCCCTC | + |
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Preference number: 1 (lower is better) Translates to: CPSVKASSKITGNRL*GRSVRAEMAKASSL Trigger: GAGGGATGAGGCCTTAGCCATTTCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCACTGATGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR TCA 90 bp | TCACCTCACAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCACCTTCATGGGATCCAGCCCATATCT | + |
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Preference number: 1 (lower is better) Translates to: SPHSQDCSQLAASLS*NLVSLHLHGIQPIS Trigger: AGATATGGGCTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR TCA 90 bp | AAAAGGGCAGGCAATCCAAGTCTGACTGTGAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGGGCTTTTTCAGGCACCTGGGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: KRAGNPSLTVRGHSY*CKVSPRAFSGTWVE Trigger: CTCTACCCAGGTGCCTGAAAAAGCCCTTGGAGACACTTTGCATCAGTAACTGTGACCTCTCACAGTCAGACTTGGATTGCCTGCCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR GCA 90 bp | TTCAATTCTTTCTTCACCTCACAGCCAGGACTGTTCTCAATTGGCTaGTTCTCTGTCCTGAAATCTGGTAAGCCTTCACCTTCATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: FNSFFTSQPGLFSIG*FSVLKSGKPSPSWD Trigger: ATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAAGAAAGAATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR GCA 90 bp | CCCTCAAGCATAGCCTTCAAAGTCTCCAGGTTGCAATTATTTATCTaGTTTCCTAAAGAAAGGTATGGGAAGGGCCACACAGGTATCATG | + |
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Preference number: 1 (lower is better) Translates to: PSSIAFKVSRLQLFI*FPKERYGKGHTGIM Trigger: CATGATACCTGTGTGGCCCTTCCCATACCTTTCTTTAGGAAAGCAGATAAATAATTGCAACCTGGAGACTTTGAAGGCTATGCTTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR TCA 90 bp | GAATTGCCAGGTTCTGGAGGGTGGGTGGGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCATCTTTATAAATTTGGCTGGTATCAA | + |
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Preference number: 1 (lower is better) Translates to: ELPGSGGWVGNSIPL*LLLKSHLYKFGWYQ Trigger: TTGATACCAGCCAAATTTATAAAGATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATTCCCCACCCACCCTCCAGAACCTGGCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221884.2 |
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| 3UTR CCA 90 bp | ATTGGCTGCTTCTCTGTCCTGAAATCTGGTAAGCCTTCACCTTCATaGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTAATT | + |
|
Preference number: 1 (lower is better) Translates to: IGCFSVLKSGKPSPS*DPAHIFKSSSLQLI Trigger: AATTAATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR TCA 90 bp | TCATCTTCTCTCCAATTAATTACTCTGAGTTTGCACCTACTGGTTTaGACCTTTTGTGCAAGCAGTATATCTAGTCCCTCAAGCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSSLQLITLSLHLLV*TFCASSISSPSSIA Trigger: GGCTATGCTTGAGGGACTAGATATACTGCTTGCACAAAAGGTTCAAACCAGTAGGTGCAAACTCAGAGTAATTAATTGGAGAGAAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR TCA 90 bp | CTCAGAAGTTTTATTCCTCCAAAGGCCATAATCCTGTCTTCATCTTaGAACCCAGTGTTGCATATAGCTCATCTGCTAAACCTGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LRSFIPPKAIILSSS*NPVLHIAHLLNLFL Trigger: CAGAAACAGGTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATTATGGCCTTTGGAGGAATAAAACTTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR TCA 90 bp | GAGGAAGTTATTGACTTTCCCGTGTATCTCAGACTTTTAGGTGATTaGCATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: EEVIDFPVYLRLLGD*HFHAPFSSGHSLRI Trigger: AATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGATACACGGGAAAGTCAATAACTTCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR GCA 90 bp | ATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTaGTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: IYCMQSTDWASLIKW*FYCNTFKLQVLDSF Trigger: GAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR CCA 90 bp | CATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATaGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCT | + |
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Preference number: 1 (lower is better) Translates to: HIYCMQSTDWASLIK*CFYCNTFKLQVLDS Trigger: AGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR CCA 90 bp | CATCTACTCAGATATGTTATGTTTCTAACAGTGCTAGGTTTATTGTaGCCAGATTATCAAGGACTCCCTAGCTTAATAAAACAAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HLLRYVMFLTVLGLL*PDYQGLPSLIKQKK Trigger: CTTCTTTTGTTTTATTAAGCTAGGGAGTCCTTGATAATCTGGCCACAATAAACCTAGCACTGTTAGAAACATAACATATCTGAGTAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTGAAATCTGGTAAGCCTCCAGGTTCTGGAGGGTaGGTGGGGAATAGCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: QPGLFSIGCFSVLKSGKPPGSGG*VGNSIP Trigger: AGGAATGCTATTCCCCACCCACCCTCCAGAACCTGG...AGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGCTTCGGACAAGCCTATATATGCTGCCTGGTTGGGTAGCTCAGTCTCTGGTTGTCAAAGAAAGGTaGAGCTGGTGGTGTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: PGLRTSLYMLPGWVAQSLVVKER*SWWCSY Trigger: ATATGAACACCACCAGCTTCACCTTTCTTTGACAAC...CAGAGACTGAGCTACCCAACCAGGCAGCATATATAGGCTTGTCCGAAGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACCTCACAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTGAAATCTGATCAAGCAATCCTCTaGTATACATGTGCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FTSQPGLFSIGCFSVLKSDQAIL*YTCAWA Trigger: AGCCCAGGCACATGTATAGCAGAGGATTGCTTGATC...AGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCACCTTCATGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AFTFMGSSPYLQVIFSPILLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAG...AATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCCTTCACCTTCATGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCGTTGTCAAAGAAAGGTaGAGCTGGTGGTGTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: VSLHLHGIQPISSSHLLSVVKER*SWWCSY Trigger: ATATGAACACCACCAGCTTCACCTTTCTTTGACAAC...GGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAAGGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTAATTACTCTGAGTGTTCTGGAGGGTGGGTaGGGAATAGCATTCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: WDPAHIFKSSSLQLITLSVLEGG*GIAFLC Trigger: ACAGAGGAATGCTATTCCCCACCCACCCTCCAGAAC...ACTCAGAGTAATTAATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR CAA 90 bp | GCCCATATCTTCAAGTCATCTTCTCTCCAATTAATTACTCTGAGTTaGCACCTACTTCTCCCACAGAAGCTGGATCAAGCAATCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AHIFKSSSLQLITLS*HLLLPQKLDQAILC Trigger: GCAGAGGATTGCTTGATCCAGCTTCTGTGGGAGAAGTAGGTGCAAACTCAGAGTAATTAATTGGAGAGAAGATGACTTGAAGATATGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222391.2 |
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| 3UTR CAA 90 bp | CAGCTAAGCAGATGGCACTTCTCCCAAACTCATTCTGACTACACTTaGAGGTCAATTCTAGGATACAGCCTTGTGTTATCTGCTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: QLSRWHFSQTHSDYT*RSILGYSLVLSALT Trigger: TGTGAGAGCAGATAACACAAGGCTGTATCCTAGAATTGACCTCAAAGTGTAGTCAGAATGAGTTTGGGAGAAGTGCCATCTGCTTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTAATTACTCTGAGTGATCAAGCAATCCTCTaGTATACATGTGCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WDPAHIFKSSSLQLITLSDQAIL*YTCAWA Trigger: AGCCCAGGCACATGTATAGCAGAGGATTGCTTGATC...ACTCAGAGTAATTAATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTATCTCAGAGGAAGTTATTaGCTTTCCCGTGTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLILSTDATSIHQLRGSYLRGSY*LSRVSQ Trigger: CTGAGATACACGGGAAAGTCAATAACTTCCTCTGAG...ATAACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCACCTCACAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTGAAATCAAAGTCTCCAGGTTaGAATTATTTATCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: FFTSQPGLFSIGCFSVLKSKSPG*NYLSAF Trigger: GAAAGCAGATAAATAATTGCAACCTGGAGACTTTGA...TTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATACAGCCTTGTGTTATCTGCTCTCACAACTCACAGTATTCTAGTCTGAGGCAAACTACAAGTGCTTaGTTCTTTCTACAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: RIQPCVICSHNSQYSSLRQTTSA*FFLQMQ Trigger: TTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTG...CCTCAGACTAGAATACTGTGAGTTGTGAGAGCAGATAACACAAGGCTGTATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR CAA 90 bp | TCTCAGAAGTTTTATTCCTCCAAAGGCCATAATCCTGTCTTCATCTaGAAACCCAGTGTTGCATATAGCTCATCTGCTAAACCTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQKFYSSKGHNPVFI*KPSVAYSSSAKPVS Trigger: AGAAACAGGTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATTATGGCCTTTGGAGGAATAAAACTTCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTCAGAGGAAGTTATTaGCTTTCCCGTGTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: STYLLYAVNRLGQSHKMVLRGSY*LSRVSQ Trigger: CTGAGATACACGGGAAAGTCAATAACTTCCTCTGAG...CACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCCTCAGAGGAAGTTATTaGCTTTCCCGTGTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CFYCNTFKLQVLDSFYRCLRGSY*LSRVSQ Trigger: CTGAGATACACGGGAAAGTCAATAACTTCCTCTGAG...GCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTATCAAACTACAAGTGCTTaGTTCTTTCTACAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: CLILSTDATSIHQLRGSYQTTSA*FFLQMQ Trigger: TTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTG...ATAACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAACATATTTATTGTATaGAGTCAACAGATTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: MLHLAVDIHLGFHQSPILNIFIV*SQQIGP Trigger: TGGCCCAATCTGTTGACTGCATACAATAAATATGTT...TAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGGCTCTCAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTAACATATTTATTGTATaGAGTCAACAGATTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LLALSISRSSGQKLSNLCNIFIV*SQQIGP Trigger: TGGCCCAATCTGTTGACTGCATACAATAAATATGTT...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCAAGTCATCTTCTCTCCAATTAATTACTCTGAGTTTGCACCTACTGGTTAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: IFKSSSLQLITLSLHLLVNSIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATT...AACCAGTAGGTGCAAACTCAGAGTAATTAATTGGAGAGAAGATGACTTGAAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR CCA 72 bp | TGTGCCTGGGCTTCGGACAAGCCTATATATGCTGCCTaGTTGGGTAGCTCAGTCTCTGGGAGCTCCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: CAWASDKPIYAA*LGSSVSGSSQL Trigger: CAACTGGGAGCTCCCAGAGACTGAGCTACCCAACCAGGCAGCATATATAGGCTTGTCCGAAGCCCAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR CCA 72 bp | GTGAAGGCCTCCTCAAAAATTACTGGGAACAGACTCTaGGGCAGGTCCGTGAGAGCAGAAATGGCTAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: VKASSKITGNRL*GRSVRAEMAKA Trigger: GGCCTTAGCCATTTCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR CAA 90 bp | TCATGCGAAGGACTTCAGTCGTCACCTTCAATTCTTTCTTCACCTCACAGCCAGTCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SCEGLQSSPSILSSPHSQSVDSE*PGSGGW Trigger: CCACCCTCCAGAACCTGGCAATTCAGAGTCTACTGA...CTGGCTGTGAGGTGAAGAAAGAATTGAAGGTGACGACTGAAGTCCTTCGCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR TCA 72 bp | AGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCACCTTCATGGGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: SQDCSQLAASLS*NLVSLHLHGIQ Trigger: CTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR TCA 72 bp | GGCAATCCAAGTCTGACTGTGAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGGGCTTTTTCAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: GNPSLTVRGHSY*CKVSPRAFSGT Trigger: GGTGCCTGAAAAAGCCCTTGGAGACACTTTGCATCAGTAACTGTGACCTCTCACAGTCAGACTTGGATTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
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| 3UTR GCA 72 bp | ATCCTTCTCCCACAGAAGCTGGATCAAGCAATCCTCTaGTATACATGTGCCTGGGCTTCGGACAAGCCTATA | + |
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Preference number: 3 (lower is better) Translates to: ILLPQKLDQAIL*YTCAWASDKPI Trigger: TATAGGCTTGTCCGAAGCCCAGGCACATGTATAGCAGAGGATTGCTTGATCCAGCTTCTGTGGGAGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223172.2 |
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| 3UTR GCA 72 bp | CTACTTCTCCCACAGAAGCTGGATCAAGCAATCCTCTaGTATACATGTGCCTGGGCTTCGGACAAGCCTATA | + |
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Preference number: 3 (lower is better) Translates to: LLLPQKLDQAIL*YTCAWASDKPI Trigger: TATAGGCTTGTCCGAAGCCCAGGCACATGTATAGCAGAGGATTGCTTGATCCAGCTTCTGTGGGAGAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222391.2 |
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| 3UTR CCA 72 bp | TATATGTCCATCAGTGAAGGCCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAGGTCCGTGAGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: YMSISEGLLKNY*EQTLGQVRESR Trigger: TCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCACTGATGGACATATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCGAAGGACTTCAGTCGTCACCTTCAATTCTTTCTTCACCTCACAGCCAGGATCTGGGAGCTCCCAGTaGTCAAAGAAAGGTGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: MRRTSVVTFNSFFTSQPGSGSSQ*SKKGEA Trigger: AGCTTCACCTTTCTTTGACAACTGGGAGCTCCCAGA...TCCTGGCTGTGAGGTGAAGAAAGAATTGAAGGTGACGACTGAAGTCCTTCGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGTATGGGAAGGGCCACACAGGTATCATGGCCTTCAAGATCCCTATATGTCTGGGAGCTCCCAGTaGTCAAAGAAAGGTGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: RKVWEGPHRYHGLQDPYMSGSSQ*SKKGEA Trigger: AGCTTCACCTTTCTTTGACAACTGGGAGCTCCCAGA...CATATAGGGATCTTGAAGGCCATGATACCTGTGTGGCCCTTCCCATACCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223172.2 |
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| 3UTR GCA 72 bp | TTCTTCACCTCACAGCCAGGACTGTTCTCAATTGGCTaGTTCTCTGTCCTGAAATCTGGTAAGCCTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: FFTSQPGLFSIG*FSVLKSGKPSP Trigger: AGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
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| 3UTR TCA 72 bp | GAACATTGGCTTAGGGCAGGCAGCAAGGCACTGAACTaGAAGTCCACTATACAACATGAAACCAATTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EHWLRAGSKALN*KSTIQHETNSR Trigger: CCTGGAATTGGTTTCATGTTGTATAGTGGACTTTCAGTTCAGTGCCTTGCTGCCTGCCCTAAGCCAATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR CCA 72 bp | ACTTCTTCTAAAGAGTCATCCTTCTCCCACAGAAGCTaGATCAAGCAATCCTCTGCTATACATGTGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TSSKESSFSHRS*IKQSSAIHVPG Trigger: CCCAGGCACATGTATAGCAGAGGATTGCTTGATCCAGCTTCTGTGGGAGAAGGATGACTCTTTAGAAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223172.2 |
||
| 3UTR CCA 72 bp | AGGTATGATTCAGGGCATGGCTGGAAAACACAGCAATaGATATATCAGGCCAACATGGTGCATGTAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RYDSGHGWKTQQ*IYQANMVHVGS Trigger: GCTTCCTACATGCACCATGTTGGCCTGATATATCCATTGCTGTGTTTTCCAGCCATGCCCTGAATCATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACCTTCATGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTAATTCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FTFMGSSPYLQVIFSPINSVDSE*PGSGGW Trigger: CCACCCTCCAGAACCTGGCAATTCAGAGTCTACTGA...ATTAATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
||
| 3UTR CCA 72 bp | TTCTCTGTCCTGAAATCTGGTAAGCCTTCACCTTCATaGGATCCAGCCCATATCTTCAAGTCATCTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSVLKSGKPSPS*DPAHIFKSSSL Trigger: GAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000221884.2 ENSMUST00000222391.2 ENSMUST00000223172.2 |
||
| 3UTR TCA 72 bp | GGTTCTGGAGGGTGGGTGGGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCATCTTTATAAATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSGGWVGNSIPL*LLLKSHLYKFG Trigger: GCCAAATTTATAAAGATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATTCCCCACCCACCCTCCAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221884.2 |
||
| 3UTR TCA 72 bp | CAGCAAGGCACTGAACTGAAAGTCCACTATACAACATaGAACCAATTCCAGGGTTTTCAGGGTATCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QQGTELKVHYTT*NQFQGFQGISN Trigger: GTTGGAGATACCCTGAAAACCCTGGAATTGGTTTCATGTTGTATAGTGGACTTTCAGTTCAGTGCCTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR CCA 72 bp | TGGTTGTTTGAAAGGAGACACTATGGAGCTGTCTTTTaGCTCTCAGTATATCCAGGAGCTCAGGACAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WLFERRHYGAVF*LSVYPGAQDKN Trigger: GTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAACAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAAAGGAGACACTATGGAGCTGTCTTTTGGCTCTCAGTATATCCAGGAGCTCAACTACTAGGGCTGTaGTTAAGAGTTCTCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FERRHYGAVFWLSVYPGAQLLGL*LRVLRS Trigger: ACTTCTGAGAACTCTTAACAACAGCCCTAGTAGTTG...AGCTCCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAGCTCAGAGGAAGTTATaGACTTTCCCGTGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MLHLAVDIHLGFHQSPILAQRKL*TFPCIS Trigger: TGAGATACACGGGAAAGTCAATAACTTCCTCTGAGC...TAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR GCA 72 bp | ATAGCCTTCAAAGTCTCCAGGTTGCAATTATTTATCTaGTTTCCTAAAGAAAGGTATGGGAAGGGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: IAFKVSRLQLFI*FPKERYGKGHT Trigger: TGTGTGGCCCTTCCCATACCTTTCTTTAGGAAAGCAGATAAATAATTGCAACCTGGAGACTTTGAAGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
||
| 3UTR CCA 72 bp | TGTAGTTATCACTATAGGTATGATTCAGGGCATGGCTaGAAAACACAGCAATGGATATATCAGGCCAACATG | + |
|
Preference number: 3 (lower is better) Translates to: CSYHYRYDSGHG*KTQQWIYQANM Trigger: CATGTTGGCCTGATATATCCATTGCTGTGTTTTCCAGCCATGCCCTGAATCATACCTATAGTGATAACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACGCTCAGAGGAAGTTATaGACTTTCCCGTGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: THSNYKCLILSTDATSIHAQRKL*TFPCIS Trigger: TGAGATACACGGGAAAGTCAATAACTTCCTCTGAGC...GTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR TCA 72 bp | CTCCAATTAATTACTCTGAGTTTGCACCTACTGGTTTaGACCTTTTGTGCAAGCAGTATATCTAGTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQLITLSLHLLV*TFCASSISSPS Trigger: TGAGGGACTAGATATACTGCTTGCACAAAAGGTTCAAACCAGTAGGTGCAAACTCAGAGTAATTAATTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
||
| 3UTR TCA 72 bp | GTTAAGCCTTCAATTAGTAGCTTTCTACAGAATAGATaGATAGAATCTTTTCTCTGCTGGGCCCACTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VKPSISSFLQNR*IESFLCWAHCN Trigger: GTTGCAGTGGGCCCAGCAGAGAAAAGATTCTATTCATCTATTCTGTAGAAAGCTACTAATTGAAGGCTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222391.2 |
||
| 3UTR TCA 72 bp | TTTATTCCTCCAAAGGCCATAATCCTGTCTTCATCTTaGAACCCAGTGTTGCATATAGCTCATCTGCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FIPPKAIILSSS*NPVLHIAHLLN Trigger: GTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATTATGGCCTTTGGAGGAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCGCTCAGAGGAAGTTATaGACTTTCCCGTGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CFYCNTFKLQVLDSFYRCAQRKL*TFPCIS Trigger: TGAGATACACGGGAAAGTCAATAACTTCCTCTGAGC...GCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCCATTCTGACTACACTTaGAGGTCAATTCTAGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: HIYCMQSTDWASLIKWCFHSDYT*RSILGY Trigger: GTATCCTAGAATTGACCTCAAAGTGTAGTCAGAATG...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR TCA 72 bp | ATTGACTTTCCCGTGTATCTCAGACTTTTAGGTGATTaGCATTTTCATGCTCCATTTAGCAGTGGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: IDFPVYLRLLGD*HFHAPFSSGHS Trigger: TGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGATACACGGGAAAGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR GCA 72 bp | AATGGTGCTTCTATTGTAACACATTCAAACTACAAGTaGTTGATTCTTTCTACAGATGCAACATCCATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGASIVTHSNYK*LILSTDATSIH Trigger: GTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| 3UTR CCA 72 bp | AGATATGTTATGTTTCTAACAGTGCTAGGTTTATTGTaGCCAGATTATCAAGGACTCCCTAGCTTAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RYVMFLTVLGLL*PDYQGLPSLIK Trigger: TTTTATTAAGCTAGGGAGTCCTTGATAATCTGGCCACAATAAACCTAGCACTGTTAGAAACATAACATATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR CCA 72 bp | AAAAGTCAACATATTTATTGTATGCAGTCAACAGATTaGGCCAGTCTCATAAAATGGTGCTTCTATTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSQHIYCMQSTD*ASLIKWCFYCN Trigger: GTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTGACTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| 3UTR CAA 72 bp | GCCTGGGCTTCGGACAAGCCTATATATGCTGCCTGGTaGGGTAGCTCAGTCTCTGGGAGCTCCCAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWASDKPIYAAW*GSSVSGSSQLS Trigger: TGACAACTGGGAGCTCCCAGAGACTGAGCTACCCAACCAGGCAGCATATATAGGCTTGTCCGAAGCCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
||
| 3UTR CAA 72 bp | AAATGGCTAAGGCCTCATCCCTCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGTGGGTGGGGAATAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KWLRPHPSVDSE*PGSGGWVGNSI Trigger: AATGCTATTCCCCACCCACCCTCCAGAACCTGGCAATTCAGAGTCTACTGAGGGATGAGGCCTTAGCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGATGGCACTTCTCCCAAACTCATTCTGACTACACTTTGAGGTCAATTCTATCTGGGGCAGGTCCGTaGGAGCAGAAATGGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRWHFSQTHSDYTLRSILSGAGP*EQKWLR Trigger: CCTTAGCCATTTCTGCTCTCACGGACCTGCCCCAGA...TAGAATTGACCTCAAAGTGTAGTCAGAATGAGTTTGGGAGAAGTGCCATCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | CACTATGGAGCTGTCTTTTGGCTCTCAGTATATCCAGGAGCTCAGGACAAAAACGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HYGAVFWLSVYPGAQDKNAASLS*NLVSLH Trigger: GTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGC...GTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTCCAGGTTCTGGAGGGTaGGTGGGGAATAGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAPFSSGHSLRISSVPNTPGSGG*VGNSIP Trigger: AGGAATGCTATTCCCCACCCACCCTCCAGAACCTGG...AGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACCTCACAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTGAAATCATGCTTCTCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLTARTVLNWLLLCPEIMLLLI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGAGAAGCAT...GATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTTCACCTCACAGCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCCTTCTGCCTTCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLHLTARTVLNWLLLCPSAFLI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGAAGGCAGA...AGGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGCTGTGAGGTGAAGAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221884.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTGACATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATTCTGGGGCAGGTCCGTaGGAGCAGAAATGGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIDIFMLHLAVDIHLGFHSGAGP*EQKWLR Trigger: CCTTAGCCATTTCTGCTCTCACGGACCTGCCCCAGA...ATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTATGTGACCTCTCTGAGGTaGGAACATTGGCTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLILSTDATSIHQLRGSYVTSLR*EHWLRA Trigger: TGCCCTAAGCCAATGTTCTCACCTCAGAGAGGTCAC...ATAACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| CDS-3UTR CCA 90 bp | CAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCCCAGGTTCTGGAGGGTaGGTGGGGAATAGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHIYCMQSTDWASLIKWCPGSGG*VGNSIP Trigger: AGGAATGCTATTCCCCACCCACCCTCCAGAACCTGG...GCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCCCAGGTTCTGGAGGGTaGGTGGGGAATAGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIYCMQSTDWASLIKWCFPGSGG*VGNSIP Trigger: AGGAATGCTATTCCCCACCCACCCTCCAGAACCTGG...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLGFHQSPILAASLS*NLVSLH Trigger: GTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGC...TAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCGTGACCTCTCTGAGGTaGGAACATTGGCTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVDIHLGFHQSPILSFYFVTSLR*EHWLRA Trigger: TGCCCTAAGCCAATGTTCTCACCTCAGAGAGGTCAC...GAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACCAAGTCTGCCCTTCATaGGAAGGACTTCAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CMQSTDWASLIKWCFYCNQVCPS*EGLQSS Trigger: TGACGACTGAAGTCCTTCGCATGAAGGGCAGACTTG...GTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | ATATGCAGATGTTTGAGTTCACAAATATTCAGGCAAAAGGGCAGGCAATCCAAGCAAGTCTGCCCTTCATaGGAAGGACTTCAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICRCLSSQIFRQKGRQSKQVCPS*EGLQSS Trigger: TGACGACTGAAGTCCTTCGCATGAAGGGCAGACTTG...CTTGGATTGCCTGCCCTTTTGCCTGAATATTTGTGAACTCAAACATCTGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGATAGAATCTTTTCTCTaGTGGGCCCACTGCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLDSFYRCNIHSPAQRKIESFL*WAHCNK Trigger: CTTGTTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...CTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAAGGAGACACTATGGAGCTGTCTTTTGGCTCTCAGTATATCCAGGAGCTAGAGTCATCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FERRHYGAVFWLSVYPGARVILI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGATGACTCT...AGCTCCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCGTTCTGGAGGGTGGGTaGGGAATAGCATTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHIYCMQSTDWASLIKWCVLEGG*GIAFLC Trigger: ACAGAGGAATGCTATTCCCCACCCACCCTCCAGAAC...GCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCGTTCTGGAGGGTGGGTaGGGAATAGCATTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HIYCMQSTDWASLIKWCFVLEGG*GIAFLC Trigger: ACAGAGGAATGCTATTCCCCACCCACCCTCCAGAAC...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAPFSSGHSLRISSVPNTLLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAG...AGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGGCCACACAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVLDSFYRCNIHSPAQRATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGTGTGGC...CCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | AGGATACAGCCTTGTGTTATCTGCTCTCACAACTCACAGTATTCTAGTCTGAGGGCCACACAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RIQPCVICSHNSQYSSLRATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGTGTGGC...CCTCAGACTAGAATACTGTGAGTTGTGAGAGCAGATAACACAAGGCTGTATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGAGGACTGTTCTCAATTaGCTGCTTCTCTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLDSFYRCNIHSPAQRKRTVLN*LLLCPE Trigger: TTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCT...CTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | TTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLYAVNRLGQSHKMVLLLAASLS*NLVSLH Trigger: GTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGC...CAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAGAGTCATCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFHAPFSSGHSLRISSVPRVILI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGATGACTCT...GGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGCTCTCAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLALSISRSSGQKLSNLCLLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAG...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | TGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACCTCAGCAGGGCTGTGTaGTGTAGAAGTTGTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CMQSTDWASLIKWCFYCNLSRAV*CRSCFK Trigger: CTTGAAACAACTTCTACACCACACAGCCCTGCTGAG...GTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| 3UTR CAA 72 bp | AATGTAGCACCCACCACATTTAGAGCATTTGGTTGTTaGAAAGGAGACACTATGGAGCTGTCTTTTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVAPTTFRAFGC*KGDTMELSFGS Trigger: AGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAACAACCAAATGCTCTAAATGTGGTGGGTGCTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | CACTATGGAGCTGTCTTTTGGCTCTCAGTATATCCAGGAGCTCAGGACAAAAACGTTGAGAAATCAAGCTaGATATTGTCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HYGAVFWLSVYPGAQDKNVEKSS*ILSPHQ Trigger: TTGATGAGGAGACAATATTCAGCTTGATTTCTCAAC...GTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGCTCCTGTATACAGTCTaGGTGTACAGTTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLDSFYRCNIHSPAQRKLLYTV*VYSFED Trigger: ATCTTCAAAACTGTACACGCAGACTGTATACAGGAG...CTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGTTAAGAGTTCTCAGAAGTTTTATTCCTCCAAAGGCCATAATCCTGTCAGGACTGTTCTCAATTaGCTGCTTCTCTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVVKSSQKFYSSKGHNPVRTVLN*LLLCPE Trigger: TTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCT...GACAGGATTATGGCCTTTGGAGGAATAAAACTTCTGAGAACTCTTAACAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGCTCTCAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTAGGACTGTTCTCAATTaGCTGCTTCTCTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLALSISRSSGQKLSNLCRTVLN*LLLCPE Trigger: TTCAGGACAGAGAAGCAGCCAATTGAGAACAGTCCT...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTGAGAGCCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCGGAGACAGTGGAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVDIHLGFHQSPILSFYFGDSGV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTCCACTGTCTCC...GAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTTCATGGGATCCAGCCCATATCTTCAAGTCATCTTCTCTCCAATTAATATGCTTCTCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTFMGSSPYLQVIFSPINMLLLI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGAGAAGCAT...ATTAATTGGAGAGAAGATGACTTGAAGATATGGGCTGGATCCCATGAAGGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222391.2 ENSMUST00000223172.2 |
||
| 3UTR CAA 72 bp | TTCAAGTCATCTTCTCTCCAATTAATTACTCTGAGTTaGCACCTACTTCTCCCACAGAAGCTGGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSSSLQLITLS*HLLLPQKLDQA Trigger: TGCTTGATCCAGCTTCTGTGGGAGAAGTAGGTGCAAACTCAGAGTAATTAATTGGAGAGAAGATGACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222391.2 |
||
| 3UTR CAA 72 bp | AGGATAAGCTCCTGTATACAGTCTGCGTGTACAGTTTaGAAGATTTCTATCACTGAGGCTTTGGTTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RISSCIQSACTV*KISITEALVKP Trigger: AGGCTTAACCAAAGCCTCAGTGATAGAAATCTTCAAAACTGTACACGCAGACTGTATACAGGAGCTTATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222391.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTACTGCGTGTACAGTTTTaGAGATTTCTATCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLGFHQSPILLRVQF*RFLSLR Trigger: CCTCAGTGATAGAAATCTTCAAAACTGTACACGCAG...TAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTTGTTAAGAGTTCTCAGAAGTTTTATTCCTCCAAAGGCCATAATCCTGTCCTGCGTGTACAGTTTTaGAGATTTCTATCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVKSSQKFYSSKGHNPVLRVQF*RFLSLR Trigger: CCTCAGTGATAGAAATCTTCAAAACTGTACACGCAG...GACAGGATTATGGCCTTTGGAGGAATAAAACTTCTGAGAACTCTTAACAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTGGAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: KCLILSTDATSIHQLRGSWSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTCCA...ACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | CAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCGAGCATTTGGTTGTTTaGAAGGAGACACTATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHIYCMQSTDWASLIKWCEHLVV*KETLWS Trigger: GCTCCATAGTGTCTCCTTTCAAACAACCAAATGCTC...GCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTGACATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIDIFMLHLAVDIHLGFHLLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAG...ATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | ACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACGGAGACAGTGGAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THSNYKCLILSTDATSIHGDSGV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTCCACTGTCTCC...GTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | ATATCACTAATATGCAGATGTTTGAGTTCACAAATATTCAGGCAAAAGGGCAGGGGAGACAGTGGAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLICRCLSSQIFRQKGRGDSGV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTCCACTGTCTCC...CCTGCCCTTTTGCCTGAATATTTGTGAACTCAAACATCTGCATATTAGTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTGTTGAGAAATCAAGCTaGATATTGTCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCLILSTDATSIHQLRGSVEKSS*ILSPHQ Trigger: TTGATGAGGAGACAATATTCAGCTTGATTTCTCAAC...ACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | CTTGATTCTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTATTGTGGAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LDSFYRCNIHSPAQRKLLWSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTCCA...CAATAACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGAATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | TGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACTGGAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: CMQSTDWASLIKWCFYCNWSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTCCA...GTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | ATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATATAGAATCTTTTCTCTaGTGGGCCCACTGCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYCMQSTDWASLIKWCFYIESFL*WAHCNK Trigger: CTTGTTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...ATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR CCA 90 bp | TCAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGAGAGTCATCCTGATCTaGACAATGGAGACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: STYLLYAVNRLGQSHKMVRVILI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGATGACTCT...CACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | ATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATGCCACACAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: IYCMQSTDWASLIKWCFYATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGTGTGGC...ATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR CCA 90 bp | CATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCTCAGTTTCCTCAGCAGGGCTGTGTaGTGTAGAAGTTGTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLRISSVPNTKFLFLSFLSRAV*CRSCFK Trigger: CTTGAAACAACTTCTACACCACACAGCCCTGCTGAG...GAAACTGAGAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCAATTCTAGGATACAGCCTTGTGTTATCTGCTCTCACAACTCACAGTATTAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSILGYSLVLSALTTHSINSIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATT...AATACTGTGAGTTGTGAGAGCAGATAACACAAGGCTGTATCCTAGAATTGACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTGACATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCTGCGTGTACAGTTTTaGAGATTTCTATCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIDIFMLHLAVDIHLGFHLRVQF*RFLSLR Trigger: CCTCAGTGATAGAAATCTTCAAAACTGTACACGCAG...ATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCAGAGCATTTGGTTGTTTaGAAGGAGACACTATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASIVTHSNYKCLILSTDAEHLVV*KETLWS Trigger: GCTCCATAGTGTCTCCTTTCAAACAACCAAATGCTC...TGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTTCAAAGTCTCCAGGTTaGAATTATTTATCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HAPFSSGHSLRISSVPNTSKSPG*NYLSAF Trigger: GAAAGCAGATAAATAATTGCAACCTGGAGACTTTGA...AGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR GCA 90 bp | CATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCTCAGTTTCATAGAATCTTTTCTCTaGTGGGCCCACTGCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLRISSVPNTKFLFLSFIESFL*WAHCNK Trigger: CTTGTTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...GAAACTGAGAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| 3UTR CAA 72 bp | TCTAGTCCCTCAAGCATAGCCTTCAAAGTCTCCAGGTaGCAATTATTTATCTGCTTTCCTAAAGAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSIAFKVSR*QLFICFPKERY Trigger: ATACCTTTCTTTAGGAAAGCAGATAAATAATTGCAACCTGGAGACTTTGAAGGCTATGCTTGAGGGACTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221884.2 ENSMUST00000223172.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVDIHLGFHQSPILSFYFNSIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATT...GAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCAATTCTAGGATACAGCCTTGTGTTATCTGCTCTCACAACTCACAGTATTTCAAAGTCTCCAGGTTaGAATTATTTATCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSILGYSLVLSALTTHSISKSPG*NYLSAF Trigger: GAAAGCAGATAAATAATTGCAACCTGGAGACTTTGA...AATACTGTGAGTTGTGAGAGCAGATAACACAAGGCTGTATCCTAGAATTGACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | GTGATTGACATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCTCCTGTATACAGTCTaGGTGTACAGTTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIDIFMLHLAVDIHLGFHLLYTV*VYSFED Trigger: ATCTTCAAAACTGTACACGCAGACTGTATACAGGAG...ATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| 3UTR CAA 72 bp | CTCAGATATGTTATGTTTCTAACAGTGCTAGGTTTATaGTGGCCAGATTATCAAGGACTCCCTAGCTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRYVMFLTVLGL*WPDYQGLPSLI Trigger: TATTAAGCTAGGGAGTCCTTGATAATCTGGCCACAATAAACCTAGCACTGTTAGAAACATAACATATCTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222081.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHIYCMQSTDWASLIKWNSIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATT...CCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS-3UTR TCA 90 bp | ACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCAACATCCATTCACGTTGAGAAATCAAGCTaGATATTGTCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: THSNYKCLILSTDATSIHVEKSS*ILSPHQ Trigger: TTGATGAGGAGACAATATTCAGCTTGATTTCTCAAC...GTGAATGGATGTTGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCAACATATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGCTCCTGTATACAGTCTaGGTGTACAGTTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSTYLLYAVNRLGQSHKMLLYTV*VYSFED Trigger: ATCTTCAAAACTGTACACGCAGACTGTATACAGGAG...CATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATATGTTGACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220521.2 ENSMUST00000222081.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATTCTTTCTACAGATGCATCAAAGTCTCCAGGTTaGAATTATTTATCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASIVTHSNYKCLILSTDASKSPG*NYLSAF Trigger: GAAAGCAGATAAATAATTGCAACCTGGAGACTTTGA...TGCATCTGTAGAAAGAATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS TCA 90 bp | GAATTGCCAGGTTCTGGAGGGTGGGTGGGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCATCCTGATCTGGACAATGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGSGGWVGNSIPL*LLLKSHPDLDNGDR Trigger: TCTGTCTCCATTGTCCAGATCAGGATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATTCCCCACCCACCCTCCAGAACCTGGCAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
||
| CDS TCA 72 bp | GGTTCTGGAGGGTGGGTGGGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAGTCATCCTGATCTGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: GSGGWVGNSIPL*LLLKSHPDLDN Trigger: ATTGTCCAGATCAGGATGACTCTTTAGAAGAAGTCACAGAGGAATGCTATTCCCCACCCACCCTCCAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000222081.2 ENSMUST00000222556.2 |
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| CDS TCA 72 bp | GGAGACAGTGGAGTGTGGGAAGTTGAGAAATCAAGCTaGATATTGTCTCCTCATCAAGCTTTTCAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GDSGVWEVEKSS*ILSPHQAFQNH Trigger: GTGATTCTGAAAAGCTTGATGAGGAGACAATATTCAGCTTGATTTCTCAACTTCCCACACTCCACTGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
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| CDS CAA 90 bp | GACATCATTTATGTAGAGTTTCTGGAGACAGTGGAGTGTGGGAAGTaGAGAAATCAAGCTGAATATTGTCTCCTCATCAAGCTTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DIIYVEFLETVECGK*RNQAEYCLLIKLFR Trigger: TCTGAAAAGCTTGATGAGGAGACAATATTCAGCTTGATTTCTCAACTTCCCACACTCCACTGTCTCCAGAAACTCTACATAAATGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071580.8 ENSMUST00000220521.2 ENSMUST00000222081.2 |
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