Pregenerated sensors for PRAMEL48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070677Ensembl transcript IDs: ENSMUST00000094593.7, ENSMUST00000202481.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCTaGTTCCATCATGTCCCTGGTCCAACAGTCTATTGGAATAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: ILSGQKPHINAKLFF*FHHVPGPTVYWNSP Trigger: TGGACTATTCCAATAGACTGTTGGACCAGGGACATGATGGAATCAGAAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR CCA 90 bp | CTGGAACTTTGCTTCCTTCATAAAATAACAGTGTCTTTCCAATCCTaGACCTATTCTATCATCCTGACCCTGAACCTGGTAGTAAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LELCFLHKITVSFQS*TYSIILTLNLVVRL Trigger: CAACCTTACTACCAGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATTTTATGAAGGAAGCAAAGTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGGCCAAACTGTTTTTCTaGTTCCATCATGTCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVAKLFF*FHHVPG Trigger: ACCAGGGACATGATGGAATCAGAAAAACAGTTTGGC...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTGGTCCAACAGTCTATTaGAATAGTCCACATTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PHKSVIHVAQARDQGKMCGPTVY*NSPHFY Trigger: ATAGAAATGTGGACTATTCCAATAGACTGTTGGACC...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGGGTCCAACAGTCTATTaGAATAGTCCACATTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVGPTVY*NSPHFY Trigger: ATAGAAATGTGGACTATTCCAATAGACTGTTGGACC...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTTCTAAATATACTGTCTaGGCAGAAGCCACATATAAA | + |
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Preference number: 2 (lower is better) Translates to: PHKSVIHVAQARDQGKMCSKYTV*AEATYK Trigger: TTTATATGTGGCTTCTGCCCAGACAGTATATTTAGA...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCGCCAAACTGTTTTTCTaGTTCCATCATGTCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KCFVHITDQPHKSVIHVAAKLFF*FHHVPG Trigger: ACCAGGGACATGATGGAATCAGAAAAACAGTTTGGC...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR CAA 90 bp | ACAAAAAGATCAGGATTTAAAGCTAGAATGGAAAGCCTGTTTACTTaGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TKRSGFKARMESLFT*LYVVFLPLGIFDGS Trigger: GGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGTAAACAGGCTTTCCATTCTAGCTTTAAATCCTGATCTTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR CCA 72 bp | TCCCAGTCACTACACATCTCTTTACTTCTAACCATATaGGAAGTGTCTGAAGTCACAGTCTCTGAGCACCCT | + |
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Preference number: 3 (lower is better) Translates to: SQSLHISLLLTI*EVSEVTVSEHP Trigger: AGGGTGCTCAGAGACTGTGACTTCAGACACTTCCCATATGGTTAGAAGTAAAGAGATGTGTAGTGACTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR CAA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTAACCTGGTAGTAAGGTaGGTAAAAGTCAAAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: PHKSVIHVAQARDQGKMCNLVVR*VKVKDP Trigger: AGGGTCTTTGACTTTTACCAACCTTACTACCAGGTT...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR TCA 72 bp | GAAGTGTCTGAAGTCACAGTCTCTGAGCACCCTGGATaGGAGATGTGTCCCAAGCATGTCATTTATTCATAT | + |
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Preference number: 3 (lower is better) Translates to: EVSEVTVSEHPG*EMCPKHVIYSY Trigger: ATATGAATAAATGACATGCTTGGGACACATCTCTCATCCAGGGTGCTCAGAGACTGTGACTTCAGACACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR TCA 72 bp | GGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCTaGTTCCATCATGTCCCTGGTCCAACAGTCTATTGG | + |
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Preference number: 3 (lower is better) Translates to: GQKPHINAKLFF*FHHVPGPTVYW Trigger: CCAATAGACTGTTGGACCAGGGACATGATGGAATCAGAAAAACAGTTTGGCATTTATATGTGGCTTCTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR TCA 72 bp | TTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTaGTGGGTCCAAGGTGCCTTGTGGTCTCAACATACT | + |
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Preference number: 3 (lower is better) Translates to: FALCCLPTFRHL*WVQGALWSQHT Trigger: AGTATGTTGAGACCACAAGGCACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR CCA 72 bp | TGCTTCCTTCATAAAATAACAGTGTCTTTCCAATCCTaGACCTATTCTATCATCCTGACCCTGAACCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: CFLHKITVSFQS*TYSIILTLNLV Trigger: TACCAGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATTTTATGAAGGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR-3UTR CAA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCAACCTGGTAGTAAGGTaGGTAAAAGTCAAAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: KCFVHITDQPHKSVIHVANLVVR*VKVKDP Trigger: AGGGTCTTTGACTTTTACCAACCTTACTACCAGGTT...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AATAACAGTGTCTTTCCAATCCTGGACCTATTCTATCATCCTGACCCTGAACCTCCCACAGGGAGATCGTaGAAAGGCCAGGCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NNSVFPILDLFYHPDPEPPTGRS*KGQAAT Trigger: GGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTGGG...AGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCCAGCAAAGGCCTCTTaGAACAGTGGTGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: PHKSVIHVAQARDQGKMCPAKAS*NSGGKT Trigger: GGTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGG...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGCTAGCTTCTGGAGTGTaGGTGGGGTCTGACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVLASGV*VGSDHS Trigger: TGAGTGGTCAGACCCCACCCACACTCCAGAAGCTAG...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTGGGGAGGTATTCTTGTaGAGTGGTGCCAGGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: PHKSVIHVAQARDQGKMCGEVFL*SGARKT Trigger: AGTCTTCCTGGCACCACTCCACAAGAATACCTCCCC...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCCTCCAGAGAGGATATaGCCAAAGCCTCATCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PHKSVIHVAQARDQGKMCPPERI*PKPHLS Trigger: TGAGAGATGAGGCTTTGGCCATATCCTCTCTGGAGG...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCCCACAGGGAGATCGTaGAAAGGCCAGGCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFPTGRS*KGQAAT Trigger: GGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTGGG...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTAGTGGAAAGGCCAGGCTaGCACCATTGCCTTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLVERPG*HHCLYE Trigger: CTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCAC...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCTGGGAAGACCACAGCTaGCAGCTCCTCCAGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAWEDHS*QLLQRG Trigger: TCCTCTCTGGAGGAGCTGCCAGCTGTGGTCTTCCCA...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGAAGAGGACAATGAGCTaGGAGTCCTTCATGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVKRTMS*ESFMLH Trigger: GTGTAGCATGAAGGACTCCCAGCTCATTGTCCTCTT...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR TCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTTTCATGCTACACCACTaGAAATCCAGAGACTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PHKSVIHVAQARDQGKMCFMLHH*KSRDSR Trigger: TCTTGAGTCTCTGGATTTTCAGTGGTGTAGCATGAA...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCTAGCTTCTGGAGTGTaGGTGGGGTCTGACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFLASGV*VGSDHS Trigger: TGAGTGGTCAGACCCCACCCACACTCCAGAAGCTAG...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTACCTCCAGAGAGGATATaGCCAAAGCCTCATCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLPPERI*PKPHLS Trigger: TGAGAGATGAGGCTTTGGCCATATCCTCTCTGGAGG...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCCAGCAAAGGCCTCTTaGAACAGTGGTGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFPAKAS*NSGGKT Trigger: GGTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGG...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTTACAGCAGAAATTTATaGACCCCTTTCTCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PHKSVIHVAQARDQGKMCYSRNL*TPFSAW Trigger: CCAAGCAGAGAAAGGGGTCCATAAATTTCTGCTGTA...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | AGAGATGTGTCCCAAGCATGTCATTTATTCATATTCAGAAGTCCTGTATCCATGTCTCTCAGCAGTGTCTaGCTTGCTAGCTTCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RDVSQACHLFIFRSPVSMSLSSV*LASFWS Trigger: ACTCCAGAAGCTAGCAAGGCAGACACTGCTGAGAGA...CATGGATACAGGACTTCTGAATATGAATAAATGACATGCTTGGGACACATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCGTGGAAAGGCCAGGCTaGCACCATTGCCTTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAVERPG*HHCLYE Trigger: CTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCAC...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | AATAACAGTGTCTTTCCAATCCTGGACCTATTCTATCATCCTGACCCTGAACCTATTCTTGTGGAGTGGTaGCAGGAAGACTCTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: NNSVFPILDLFYHPDPEPILVEW*QEDSFK Trigger: CTTGAAAGAGTCTTCCTGGCACCACTCCACAAGAAT...AGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | AGAGATGTGTCCCAAGCATGTCATTTATTCATATTCAGAAGTCCTGTATCCATGCAGTTGGCTGTGTGCTaGAAAAGGTCCTTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RDVSQACHLFIFRSPVSMQLAVC*KRSFRM Trigger: CATCCTGAAGGACCTTTTGCAGCACACAGCCAACTG...CATGGATACAGGACTTCTGAATATGAATAAATGACATGCTTGGGACACATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGACCCCTTTCTCTGCTTaGCCCAATTCAAGAAATATG | + |
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Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVTPFSA*PNSRNM Trigger: CATATTTCTTGAATTGGGCCAAGCAGAGAAAGGGGT...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCGGGGAGGTATTCTTGTaGAGTGGTGCCAGGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAGEVFL*SGARKT Trigger: AGTCTTCCTGGCACCACTCCACAAGAATACCTCCCC...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTAAAGAGGACAATGAGCTaGGAGTCCTTCATGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLKRTMS*ESFMLH Trigger: GTGTAGCATGAAGGACTCCCAGCTCATTGTCCTCTT...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTACCTTCAGGATGGCCATaGAGAAGTCATTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLPSGWP*RSHCCR Trigger: TCTACAGCAATGACTTCTCCATGGCCATCCTGAAGG...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCCAGTTGGCTGTGTGCTaGAAAAGGTCCTTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAQLAVC*KRSFRM Trigger: CATCCTGAAGGACCTTTTGCAGCACACAGCCAACTG...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTAGAGAACCTGAAGTTTTaGCCTCCAGGGGTGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLENLKF*PPGVKF Trigger: AAATTTCACCCCTGGAGGCCAAAACTTCAGGTTCTC...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCCCAAGCATGTCATTTATTCATATTCAGAAGTCCTGTATCCATGCCTTCAGGATGGCCATaGAGAAGTCATTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RDVSQACHLFIFRSPVSMPSGWP*RSHCCR Trigger: TCTACAGCAATGACTTCTCCATGGCCATCCTGAAGG...CATGGATACAGGACTTCTGAATATGAATAAATGACATGCTTGGGACACATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR TCA 90 bp | AGAGATGTGTCCCAAGCATGTCATTTATTCATATTCAGAAGTCCTGTATCCATGTTTGGCCTCCAGGGGTaGAATTTTCTTGTTAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RDVSQACHLFIFRSPVSMFGLQG*NFLVSL Trigger: GAGACTAACAAGAAAATTTCACCCCTGGAGGCCAAA...CATGGATACAGGACTTCTGAATATGAATAAATGACATGCTTGGGACACATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTAACCCCTTTCTCTGCTTaGCCCAATTCAAGAAATATG | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLTPFSA*PNSRNM Trigger: CATATTTCTTGAATTGGGCCAAGCAGAGAAAGGGGT...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTACCACAAATCTTTCTCTaGAGACATGACCCAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLPQIFL*RHDPMH Trigger: ATGCATTGGGTCATGTCTCCAGAGAAAGATTTGTGG...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGGTCTTGCCACAATTTTaGCAGACATTTGTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVVLPQF*QTFVAK Trigger: TTTTGCAACAAATGTCTGCCAAAATTGTGGCAAGAC...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR TCA 90 bp | AATAACAGTGTCTTTCCAATCCTGGACCTATTCTATCATCCTGACCCTGAACCTTTTTGTTCATTGAGCTaGGAACTGATTGACAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: NNSVFPILDLFYHPDPEPFCSLS*ELIDRS Trigger: TGATCTGTCAATCAGTTCTCAGCTCAATGAACAAAA...AGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGTCTAATTCTGTAATGTaGTCTGGATGGAAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVSNSVM*SGWKTF Trigger: GAATGTTTTCCATCCAGAGCACATTACAGAATTAGA...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTGAGAACCTGAAGTTTTaGCCTCCAGGGGTGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFENLKF*PPGVKF Trigger: AAATTTCACCCCTGGAGGCCAAAACTTCAGGTTCTC...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCCCAAGCATGTCATTTATTCATATTCAGAAGTCCTGTATCCATGTACAGCAGAAATTTATaGACCCCTTTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDVSQACHLFIFRSPVSMYSRNL*TPFSAW Trigger: CCAAGCAGAGAAAGGGGTCCATAAATTTCTGCTGTA...CATGGATACAGGACTTCTGAATATGAATAAATGACATGCTTGGGACACATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTTGATGGGTCCAAGGTGTTCATGAAGACATGTTaGAGACAGTTGAATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYVVFLPLGIFDGSKVFMKTC*RQLNLE Trigger: TTCCAAATTCAACTGTCTCCAACATGTCTTCATGAA...CACCTTGGACCCATCAAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTATGGTCTCTGAGAAAATaGACACGTTTCATGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLWSLRK*TRFMKT Trigger: TGTCTTCATGAAACGTGTCCATTTTCTCAGAGACCA...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTTTCATGCTACACCACTaGAAATCCAGAGACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFFMLHH*KSRDSR Trigger: TCTTGAGTCTCTGGATTTTCAGTGGTGTAGCATGAA...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTAGTAATGTGCTCTGGATaGAAAACATTCATGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLVMCSG*KTFMIS Trigger: AGAAATCATGAATGTTTTCCATCCAGAGCACATTAC...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR CCA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTATTCATGAAGACATGTTaGAGACAGTTGAATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLFMKTC*RQLNLE Trigger: TTCCAAATTCAACTGTCTCCAACATGTCTTCATGAA...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTTGGTCTCTGAGAAAATaGACACGTTTCATGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFWSLRK*TRFMKT Trigger: TGTCTTCATGAAACGTGTCCATTTTCTCAGAGACCA...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| 3UTR CAA 72 bp | TCAGGATTTAAAGCTAGAATGGAAAGCCTGTTTACTTaGCTCTATGTTGTCTTCCTACCTTTAGGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFKARMESLFT*LYVVFLPLGIF Trigger: AAAGATGCCTAAAGGTAGGAAGACAACATAGAGCAAAGTAAACAGGCTTTCCATTCTAGCTTTAAATCCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTTTTTGTTCATTGAGCTaGGAACTGATTGACAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFFCSLS*ELIDRS Trigger: TGATCTGTCAATCAGTTCTCAGCTCAATGAACAAAA...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 37% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCGTCTTGCCACAATTTTaGCAGACATTTGTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAVLPQF*QTFVAK Trigger: TTTTGCAACAAATGTCTGCCAAAATTGTGGCAAGAC...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTTCTAATTCTGTAATGTaGTCTGGATGGAAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFSNSVM*SGWKTF Trigger: GAATGTTTTCCATCCAGAGCACATTACAGAATTAGA...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTATACATGTAGCCTTCTGTAATGTGCTCTaGATGGAAAACATTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCFVHITDQPHKSVIHVAFCNVL*MENIHD Trigger: ATCATGAATGTTTTCCATCCAGAGCACATTACAGAA...GGCTACATGTATAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CCA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTTTCTGTAATGTGCTCTaGATGGAAAACATTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKYTVWAEATYKCQTVFFCNVL*MENIHD Trigger: ATCATGAATGTTTTCCATCCAGAGCACATTACAGAA...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | CAATGGCCCCACAGGGAGATCGTGGAAAGGCCAGGCTGCCACCATTaGCTTTATGAGCTTGTTGAGTCTGCCAGCAAAGGCCTCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QWPHREIVERPGCHH*LYELVESASKGLLE Trigger: TTCCAAGAGGCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTGGGGCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | CATATTTATCAATGGCCCCACAGGGAGATCGTGGAAAGGCCAGGCTaGCACCATTGCCTTTATGAGCTTGTTGAGTCTGCCAGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HIYQWPHREIVERPG*HHCLYELVESASKG Trigger: GCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTGGGGCCATTGATAAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS TCA 90 bp | AGCAGGAAAAGGAATCCAAGTCTGTCTGTGAAATTAGGCAGTGAGTaGTGGAGAGGGTCTGCAAGGGCGTCCTCAGGCACCCTAGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SRKRNPSLSVKLGSE*WRGSARASSGTLVS Trigger: AGATACTAGGGTGCCTGAGGACGCCCTTGCAGACCCTCTCCATCACTCACTGCCTAATTTCACAGACAGACTTGGATTCCTTTTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | CATCATAGCACTCCAGAGGGACAGGGTATTGTTCCACATTCATCTTaGTCCAGTTGGCTGTGTGCTGCAAAAGGTCCTTCAGGATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HHSTPEGQGIVPHSS*SSWLCAAKGPSGWP Trigger: TGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAGTGCTATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTGCCAGCAAAGGCCTCTaGGAACAGTGGTGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PHKSVIHVAQARDQGKMCASKGL*EQWWED Trigger: GTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGGC...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | TTCAGACGCTGCCTCAGTGCATATCTGCGAGGGGCCTTCACTACTTaGTTTTCATCCAAGGTCTCTGCATCAGAGTCACTGTCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FRRCLSAYLRGAFTT*FSSKVSASESLSFA Trigger: TGCAAATGACAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCTCGCAGATATGCACTGAGGCAGCGTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS TCA 90 bp | GCAGGTAAGAGGACAATGAGCTGGGAGTCCTTCATGCTACACCACTaGAAATCCAGAGACTCAAGAGTACCTGCCAGTTTTCCTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGKRTMSWESFMLHH*KSRDSRVPASFPRR Trigger: TCTCCTAGGAAAACTGGCAGGTACTCTTGAGTCTCTGGATTTTCAGTGGTGTAGCATGAAGGACTCCCAGCTCATTGTCCTCTTACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | AATAACAGTGTCTTTCCAATCCTGGACCTATTCTATCATCCTGACCCTGAACCTTCAGCAGTGTCTGCCTaGCTAGCTTCTGGAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NNSVFPILDLFYHPDPEPSAVSA*LASGVW Trigger: CCACACTCCAGAAGCTAGCAAGGCAGACACTGCTGA...AGGTTCAGGGTCAGGATGATAGAATAGGTCCAGGATTGGAAAGACACTGTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | CCACACAAAAGTGTTATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTAGGGGCCTTCACTACTaGCTTTTCATCCAAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHKSVIHVAQARDQGKMCRGLHY*LFIQGL Trigger: GAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCT...ACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATAACACTTTTGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | ATATCTGCGAGGGGCCTTCACTACTTGCTTTTCATCCAAGGTCTCTaGATCAGAGTCACTGTCATTTGCATCGCTCCATATGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISARGLHYLLFIQGL*IRVTVICIAPYVPE Trigger: TTCTGGAACATATGGAGCGATGCAAATGACAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCTCGCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | TATACATGTAGCCCAGGCAAGAGACCAGGGAAAGATGTGTCAAGAAAACTTTTATCAGCAGTGTCTGCCTaGCTAGCTTCTGGAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTCSPGKRPGKDVSRKLLSAVSA*LASGVW Trigger: CCACACTCCAGAAGCTAGCAAGGCAGACACTGCTGA...TAAAAGTTTTCTTGACACATCTTTCCCTGGTCTCTTGCCTGGGCTACATGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTGCCAGCAAAGGCCTCTaGGAACAGTGGTGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASKYTVWAEATYKCQTVFASKGL*EQWWED Trigger: GTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGGC...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS TCA 90 bp | CTCTGCTTGGCCCAATTCAAGAAATATGCTTTTTGTTCATTGAGCTaGGAACTGATTGACAGATCAACTATGATCTTCAGACGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCLAQFKKYAFCSLS*ELIDRSTMIFRRCL Trigger: GAGGCAGCGTCTGAAGATCATAGTTGATCTGTCAATCAGTTCTCAGCTCAATGAACAAAAAGCATATTTCTTGAATTGGGCCAAGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 90 bp | CGTCTGGTGCATCCCAGATCTTCATCTTTGTACAGCAGAAATTTATaGACCCCTTTCTCTGCTTGGCCCAATTCAAGAAATATGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLVHPRSSSLYSRNL*TPFSAWPNSRNMLF Trigger: AAAAAGCATATTTCTTGAATTGGGCCAAGCAGAGAAAGGGGTCCATAAATTTCTGCTGTACAAAGATGAAGATCTGGGATGCACCAGACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 90 bp | AGCCGCAACAGAGTCCAGTCGGTATACAGTTCTAATTCTGTAATGTaGTCTGGATGGAAAACATTCATGATTTCTCTGATAACTTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRNRVQSVYSSNSVM*SGWKTFMISLITSS Trigger: AGACGAAGTTATCAGAGAAATCATGAATGTTTTCCATCCAGAGCACATTACAGAATTAGAACTGTATACCGACTGGACTCTGTTGCGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 90 bp | AGAGTCCAGTCGGTATACAGTTCTAATTCTGTAATGTGCTCTGGATaGAAAACATTCATGATTTCTCTGATAACTTCGTCTGGTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQSVYSSNSVMCSG*KTFMISLITSSGAS Trigger: GGATGCACCAGACGAAGTTATCAGAGAAATCATGAATGTTTTCCATCCAGAGCACATTACAGAATTAGAACTGTATACCGACTGGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS-3UTR CAA 90 bp | GCATCTAAATATACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTGTTTTTCAGAGTCACTGTCATTaGCATCGCTCCATATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASKYTVWAEATYKCQTVFQSHCH*HRSICS Trigger: GGAACATATGGAGCGATGCAAATGACAGTGACTCTG...AAAAACAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTATATTTAGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS TCA 90 bp | CCAATTCAAGAAATATGCTTTTTGTTCATTGAGCTGAGAACTGATTaGCAGATCAACTATGATCTTCAGACGCTGCCTCAGTGCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: PIQEICFLFIELRTD*QINYDLQTLPQCIS Trigger: AGATATGCACTGAGGCAGCGTCTGAAGATCATAGTTGATCTGTCAATCAGTTCTCAGCTCAATGAACAAAAAGCATATTTCTTGAATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | CAATGGCCCCACAGGGAGATCGTGGAAAGGCCAGGCTaGCACCATTGCCTTTATGAGCTTGTTGAGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QWPHREIVERPG*HHCLYELVESA Trigger: GGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTGGGGCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CAA 90 bp | GGGAGATCGTGGAAAGGCCAGGCTGCCACCATTGCCTTTATGAGCTaGTTGAGTCTGCCAGCAAAGGCCTCTTGGAACAGTGGTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRSWKGQAATIAFMS*LSLPAKASWNSGGK Trigger: CTTCCCACCACTGTTCCAAGAGGCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | CACAGGGAGATCGTGGAAAGGCCAGGCTGCCACCATTaGCTTTATGAGCTTGTTGAGTCTGCCAGCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HREIVERPGCHH*LYELVESASKG Trigger: GCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCTCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CAA 90 bp | AGATCGTGGAAAGGCCAGGCTGCCACCATTGCCTTTATGAGCTTGTaGAGTCTGCCAGCAAAGGCCTCTTGGAACAGTGGTGGGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSWKGQAATIAFMSL*SLPAKASWNSGGKT Trigger: GGTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCACGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CCA 72 bp | TTTATGAGCTTGTTGAGTCTGCCAGCAAAGGCCTCTTaGAACAGTGGTGGGAAGACCACAGCTGGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FMSLLSLPAKAS*NSGGKTTAGSS Trigger: GGAGCTGCCAGCTGTGGTCTTCCCACCACTGTTCCAAGAGGCCTTTGCTGGCAGACTCAACAAGCTCATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CAA 72 bp | TGGAAAGGCCAGGCTGCCACCATTGCCTTTATGAGCTaGTTGAGTCTGCCAGCAAAGGCCTCTTGGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: WKGQAATIAFMS*LSLPAKASWNS Trigger: ACTGTTCCAAGAGGCCTTTGCTGGCAGACTCAACAAGCTCATAAAGGCAATGGTGGCAGCCTGGCCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CAA 72 bp | GGGACAGGGTATTGTTCCACATTCATCTTGCTCCAGTaGGCTGTGTGCTGCAAAAGGTCCTTCAGGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTGYCSTFILLQ*AVCCKRSFRMA Trigger: GGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS GCA 72 bp | TGCCTCAGTGCATATCTGCGAGGGGCCTTCACTACTTaGTTTTCATCCAAGGTCTCTGCATCAGAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CLSAYLRGAFTT*FSSKVSASESL Trigger: CAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCTCGCAGATATGCACTGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CCA 72 bp | GGACAGGGTATTGTTCCACATTCATCTTGCTCCAGTTaGCTGTGTGCTGCAAAAGGTCCTTCAGGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQGIVPHSSCSS*LCAAKGPSGWP Trigger: TGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
||
| CDS CAA 72 bp | CTGCCTCAGTGCATATCTGCGAGGGGCCTTCACTACTaGCTTTTCATCCAAGGTCTCTGCATCAGAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LPQCISARGLHY*LFIQGLCIRVT Trigger: AGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCTCGCAGATATGCACTGAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CAA 72 bp | CACTCCAGAGGGACAGGGTATTGTTCCACATTCATCTaGCTCCAGTTGGCTGTGTGCTGCAAAAGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HSRGTGYCSTFI*LQLAVCCKRSF Trigger: GAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CAA 90 bp | GGAGACATGACCCAATGCATCATAGCACTCCAGAGGGACAGGGTATaGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: GDMTQCIIALQRDRV*FHIHLAPVGCVLQK Trigger: CTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAGTGCTATGATGCATTGGGTCATGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | TGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTaGAAAAGGTCCTTCAGGATGGCCATGGAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: CSTFILLQLAVC*KRSFRMAMEKS Trigger: TGACTTCTCCATGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CAA 72 bp | ACCCAATGCATCATAGCACTCCAGAGGGACAGGGTATaGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TQCIIALQRDRV*FHIHLAPVGCV Trigger: CACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAGTGCTATGATGCATTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | TATTGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTaGTGCAAAAGGTCCTTCAGGATGGCCATGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: YCSTFILLQLAV*CKRSFRMAMEK Trigger: CTTCTCCATGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | AGGGGCCTTCACTACTTGCTTTTCATCCAAGGTCTCTaGATCAGAGTCACTGTCATTTGCATCGCTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: RGLHYLLFIQGL*IRVTVICIAPY Trigger: ATATGGAGCGATGCAAATGACAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CAA 90 bp | ACAAAGTCTTGCCCCCTGGCCATAGACACAGGTCTTGCCACAATTTaGGCAGACATTTGTTGCAAAAGATATGCTCTTAGGCTCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: TKSCPLAIDTGLATI*ADICCKRYALRLSF Trigger: AAAAGAGAGCCTAAGAGCATATCTTTTGCAACAAATGTCTGCCAAAATTGTGGCAAGACCTGTGTCTATGGCCAGGGGGCAAGACTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | CAAATTCATAATAGGGGAGGTATTCTTGTGGAGTGGTaGCAGGAAGACTCTTTCAAGATTTTTCATCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QIHNRGGILVEW*QEDSFKIFHLP Trigger: GGGCAGATGAAAAATCTTGAAAGAGTCTTCCTGGCACCACTCCACAAGAATACCTCCCCTATTATGAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | CTTGTTAGTCTCATGTCTACTCCATCTAGCAGAGCTTaGAAGGTTTCCAGGTTATGCATATTTATCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: LVSLMSTPSSRA*KVSRLCIFING Trigger: GCCATTGATAAATATGCATAACCTGGAAACCTTGCAAGCTCTGCTAGATGGAGTAGACATGAGACTAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 72 bp | TCCCTTGTCAAATTCATAATAGGGGAGGTATTCTTGTaGAGTGGTGCCAGGAAGACTCTTTCAAGATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLVKFIIGEVFL*SGARKTLSRFF Trigger: GAAAAATCTTGAAAGAGTCTTCCTGGCACCACTCCACAAGAATACCTCCCCTATTATGAATTTGACAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 72 bp | TGTCAAATTCATAATAGGGGAGGTATTCTTGTGGAGTaGTGCCAGGAAGACTCTTTCAAGATTTTTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: CQIHNRGGILVE*CQEDSFKIFHL Trigger: CAGATGAAAAATCTTGAAAGAGTCTTCCTGGCACCACTCCACAAGAATACCTCCCCTATTATGAATTTGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 72 bp | ATGGAAAACATTCATGATTTCTCTGATAACTTCGTCTaGTGCATCCCAGATCTTCATCTTTGTACAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: MENIHDFSDNFV*CIPDLHLCTAE Trigger: TTCTGCTGTACAAAGATGAAGATCTGGGATGCACCAGACGAAGTTATCAGAGAAATCATGAATGTTTTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | GAAAACATTCATGATTTCTCTGATAACTTCGTCTGGTaGATCCCAGATCTTCATCTTTGTACAGCAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: ENIHDFSDNFVW*IPDLHLCTAEI Trigger: AATTTCTGCTGTACAAAGATGAAGATCTGGGATGCACCAGACGAAGTTATCAGAGAAATCATGAATGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS GCA 72 bp | AGAGTCCAGTCGGTATACAGTTCTAATTCTGTAATGTaGTCTGGATGGAAAACATTCATGATTTCTCTGATA | + |
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Preference number: 6 (lower is better) Translates to: RVQSVYSSNSVM*SGWKTFMISLI Trigger: TATCAGAGAAATCATGAATGTTTTCCATCCAGAGCACATTACAGAATTAGAACTGTATACCGACTGGACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS TCA 72 bp | GCCCAATTCAAGAAATATGCTTTTTGTTCATTGAGCTaGGAACTGATTGACAGATCAACTATGATCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AQFKKYAFCSLS*ELIDRSTMIFR Trigger: TCTGAAGATCATAGTTGATCTGTCAATCAGTTCTCAGCTCAATGAACAAAAAGCATATTTCTTGAATTGGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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| CDS CCA 72 bp | TCGGTATACAGTTCTAATTCTGTAATGTGCTCTGGATaGAAAACATTCATGATTTCTCTGATAACTTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVYSSNSVMCSG*KTFMISLITSS Trigger: AGACGAAGTTATCAGAGAAATCATGAATGTTTTCCATCCAGAGCACATTACAGAATTAGAACTGTATACCGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094593.7 ENSMUST00000202481.2 |
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