Pregenerated sensors for PRAMEL47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079424Ensembl transcript IDs: ENSMUST00000101015.10, ENSMUST00000160045.2, ENSMUST00000185432.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAAGGTGCTTTGTGGTCTGAATGTACTGTATAGTAACCATTTGTaGCACTTTTCTTCCTCCTTCAAAGAATTTGTCTATGTTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: SKVLCGLNVLYSNHL*HFSSSFKEFVYVAH Trigger: GTGAGCAACATAGACAAATTCTTTGAAGGAGGAAGAAAAGTGTCACAAATGGTTACTATACAGTACATTCAGACCACAAAGCACCTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCAGTTCAAAGCTAGAATaGAAAGCCTGTTTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: HRNRALETHVMKTSYRGSSSKLE*KACLLC Trigger: GCAAAGCAAACAGGCTTTCCATTCTAGCTTTGAACT...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCTGACCCCACAATTATTTCCAACCATATaGGAAGTGTCTGAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: TVWAEATYKCQTLFLTPQLFPTI*EVSEIT Trigger: TGTGATTTCAGACACTTCCCATATGGTTGGAAATAA...TTGTGGGGTCAGAAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR CAA 90 bp | CAAAAATATCAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGCTTaGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: QKYQEFKARMESLFA*LYVVFLTLGIFDGS Trigger: GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAGGCTTTCCATTCTAGCTTTGAACTCTTGATATTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGCATGGCAAAAATATCAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGTTTTGTGCACATAACTaGTCAGCCACACAAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LKHGKNIKSSKLEWKACLFCAHN*SATQKC Trigger: ACACTTTTGTGTGGCTGATCAGTTATGTGCACAAAA...CAAACAGGCTTTCCATTCTAGCTTTGAACTCTTGATATTTTTGCCATGCTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR TCA 72 bp | TTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTaGTGGGTCCAAGGTGCTTTGTGGTCTGAATGTACT | + |
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Preference number: 3 (lower is better) Translates to: FALCCLLNFRHL*WVQGALWSECT Trigger: AGTACATTCAGACCACAAAGCACCTTGGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR TCA 72 bp | ACCCTGATAGTGATGTTGTTAATAGTCAAAGACCCATaGGAGAGATCATCTAGGTTTATGAGTACACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: TLIVMLLIVKDP*ERSSRFMSTQK Trigger: TTTTTGTGTACTCATAAACCTAGATGATCTCTCTCATGGGTCTTTGACTATTAACAACATCACTATCAGGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| 3UTR TCA 72 bp | CTTTGTGGTCTGAATGTACTGTATAGTAACCATTTGTaGCACTTTTCTTCCTCCTTCAAAGAATTTGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LCGLNVLYSNHL*HFSSSFKEFVY Trigger: ATAGACAAATTCTTTGAAGGAGGAAGAAAAGTGTCACAAATGGTTACTATACAGTACATTCAGACCACAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | TTTGTGCACATAACTGATCAGCCACACAAAAGTGTTACACATGTAGCCCAGGCACTCCAGTTGGCTGTGTaGTGGAAAAGGGCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FVHITDQPHKSVTHVAQALQLAV*WKRAFR Trigger: CCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAG...TGCCTGGGCTACATGTGTAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCATCAATGACCCCACATaGAGACAGGGGAAAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSINDPT*RQGKGQ Trigger: CTGGCCTTTCCCCTGTCTCCATGTGGGGTCATTGAT...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTCAGTTGGCTGTGTGCTaGAAAAGGGCCTTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPMLSSTFRVPVTVNLFIQLAVC*KRAFRV Trigger: CACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTG...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCTCATCTTGCTCCAGTTaGCTGTGTGCTGGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSSSCSS*LCAGKG Trigger: CCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGA...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | TTTGTGCACATAACTGATCAGCCACACAAAAGTGTTACACATGTAGCCCAGGCACAGCAAAGGCCTCTTTaGATAGTGCTGGGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: FVHITDQPHKSVTHVAQAQQRPL*IVLGRP Trigger: TGGTCTTCCCAGCACTATTCAAAGAGGCCTTTGCTG...TGCCTGGGCTACATGTGTAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCAAATTAGGCATTGAGTaGTGGAGAGGGTCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSKLGIE*WRGSPR Trigger: CCTTGGAGACCCTCTCCATCACTCAATGCCTAATTT...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCCAGGTAGGAGGGCATTaGTCTGGGAGTCCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LFALLYVVFLTLGIFDGSQVGGH*SGSPSS Trigger: GGATGAAGGACTCCCAGATCAATGCCCTCCTACCTG...GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCATCAGGCACCTGGGGTaGAACTCTCTTGTCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LFALLYVVFLTLGIFDGSIRHLG*NSLVSR Trigger: GCGACTGACAAGAGAGTTTCACCCCAGGTGCCTGAT...GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCAAAGGGCCTTCAGGGTaGACATGGAGAAGTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSKGPSG*TWRSHC Trigger: ACAATGACTTCTCCATGTGCACCCTGAAGGCCCTTT...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCTGACCCCACAAAGGAGGGCATTGATCTaGGAGTCCTTCATCCTACAC | + |
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Preference number: 4 (lower is better) Translates to: TVWAEATYKCQTLFLTPQRRALI*ESFILH Trigger: GTGTAGGATGAAGGACTCCCAGATCAATGCCCTCCT...TTGTGGGGTCAGAAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | GCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCAGTTGGCTGTGTGCTaGAAAAGGGCCTTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALQIKDVSQACHLFISRSQLAVC*KRAFRV Trigger: CACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTG...ACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCAGGCTTCTTCATCAATaGCCCCACATGGAGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: LFALLYVVFLTLGIFDGSRLLHQ*PHMETG Trigger: CCCTGTCTCCATGTGGGGTCATTGATGAAGAAGCCT...GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | GCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCTCATGTCAAGAACCTaGAGTTTTGCCCTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALQIKDVSQACHLFISRSLMSRT*SFALLG Trigger: CCCCAGGAGGGCAAAACTTCAGGTTCTTGACATGAG...ACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR TCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCGAAGTGGGAACTGATTaGCAGGTTGACTATGACCTT | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSEVGTD*QVDYDL Trigger: AAGGTCATAGTCAACCTGTCAATCAGTTCCCACTTC...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR TCA 90 bp | TTTCTGAGCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGGTAGGAGGGCATTaGTCTGGGAGTCCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: FLSTADKRCVPSLSFIHIQVGGH*SGSPSS Trigger: GGATGAAGGACTCCCAGATCAATGCCCTCCTACCTG...GATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGCTCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | GCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCAGCAAAGGCCTCTTTaGATAGTGCTGGGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: ALQIKDVSQACHLFISRSQQRPL*IVLGRP Trigger: TGGTCTTCCCAGCACTATTCAAAGAGGCCTTTGCTG...ACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCGCCAGGAAGACTTTTTaGAGATTTTTCATGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSARKTF*RFFMCP Trigger: TGGGCACATGAAAAATCTTCAAAAAGTCTTCCTGGC...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTAAATTAGGCATTGAGTaGTGGAGAGGGTCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VPMLSSTFRVPVTVNLFIKLGIE*WRGSPR Trigger: CCTTGGAGACCCTCTCCATCACTCAATGCCTAATTT...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCTGACCCCACAAATTCTTGTGGAGGGGTaGCAGGAAGACTTTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVWAEATYKCQTLFLTPQILVEG*QEDFLK Trigger: CTTCAAAAAGTCTTCCTGGCACCCCTCCACAAGAAT...TTGTGGGGTCAGAAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR CCA 90 bp | TTTGTGCACATAACTGATCAGCCACACAAAAGTGTTACACATGTAGCCCAGGCATTGCCTTTAGGAGATTaGTTTGTCTGCCAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: FVHITDQPHKSVTHVAQALPLGD*FVCQQR Trigger: CCTTTGCTGGCAGACAAACCAATCTCCTAAAGGCAA...TGCCTGGGCTACATGTGTAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | TTTGTGCACATAACTGATCAGCCACACAAAAGTGTTACACATGTAGCCCAGGCAGATAACTTGGTCTGGTaGGTCCCAGATCTTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FVHITDQPHKSVTHVAQADNLVW*VPDLHL Trigger: AAGATGAAGATCTGGGACCCACCAGACCAAGTTATC...TGCCTGGGCTACATGTGTAACACTTTTGTGTGGCTGATCAGTTATGTGCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR CCA 90 bp | CTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCTCATCTTGCTCCAGTTaGCTGTGTGCTGGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LFALLYVVFLTLGIFDGSSSCSS*LCAGKG Trigger: CCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGA...GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCTTCATCCTACACCACTaGAAATCCAGAATCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSFILHH*KSRISR Trigger: TCTTGAGATTCTGGATTTTCAGTGGTGTAGGATGAA...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | TTAAAGCATGGCAAAAATATCAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGCTCCAGTTGGCTGTGTaGTGGAAAAGGGCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LKHGKNIKSSKLEWKACLLQLAV*WKRAFR Trigger: CCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAG...CAAACAGGCTTTCCATTCTAGCTTTGAACTCTTGATATTTTTGCCATGCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | CACTGTAAATCTCTTTATTTCCAACCATATGGGAAGTGTCTGAAATCACAGTTTTCAGCAGAGTGTGTGTaGGTGGGGTCTGACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: HCKSLYFQPYGKCLKSQFSAECV*VGSDHS Trigger: TGAGTGGTCAGACCCCACCCACACACACTCTGCTGA...AAACTGTGATTTCAGACACTTCCCATATGGTTGGAAATAAAGAGATTTACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | ATCTATATATACACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTTCAGCAGAGTGTGTGTaGGTGGGGTCTGACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: IYIYTVWAEATYKCQTLFSAECV*VGSDHS Trigger: TGAGTGGTCAGACCCCACCCACACACACTCTGCTGA...AAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTGTATATATAGAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTTTGCCTTTAGGAGATTaGTTTGTCTGCCAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VPMLSSTFRVPVTVNLFILPLGD*FVCQQR Trigger: CCTTTGCTGGCAGACAAACCAATCTCCTAAAGGCAA...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCTGACCCCACAAGTATACATGAGCTCCTaGCAAAGTTGGACAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: TVWAEATYKCQTLFLTPQVYMSS*QSWTNL Trigger: AAGATTTGTCCAACTTTGTCAGGAGCTCATGTATAC...TTGTGGGGTCAGAAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CATAGGAATAGGGCCCTAGAGACACATGTCATGAAGACCTCATATAGAGGTTCCGGCTTACCACATTTTTaGCAGTTATCTGTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HRNRALETHVMKTSYRGSGLPHF*QLSVAK Trigger: TTTTGCTACAGATAACTGTCAAAAATGTGGTAAGCC...GGAACCTCTATATGAGGTCTTCATGACATGTGTCTCTAGGGCCCTATTCCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | AAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCCTGTATCTATGCCATCTAGCAGAGCTTaGAAGGTTTCTAGGTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: KDVSQACHLFISRSPVSMPSSRA*KVSRLG Trigger: GCCTAACCTAGAAACCTTGCAAGCTCTGCTAGATGG...CATAGATACAGGACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTTTCATCCTACACCACTaGAAATCCAGAATCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VPMLSSTFRVPVTVNLFIFILHH*KSRISR Trigger: TCTTGAGATTCTGGATTTTCAGTGGTGTAGGATGAA...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | AATATCAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGCTTTGCTCTATGTTGCCATCTAGCAGAGCTTaGAAGGTTTCTAGGTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: NIKSSKLEWKACLLCSMLPSSRA*KVSRLG Trigger: GCCTAACCTAGAAACCTTGCAAGCTCTGCTAGATGG...CAACATAGAGCAAAGCAAACAGGCTTTCCATTCTAGCTTTGAACTCTTGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCTGACCCCACAAATGTTCCAGAAGGCATaGTACATATTTCTCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: TVWAEATYKCQTLFLTPQMFQKA*YIFLMS Trigger: TGACATGAGAAATATGTACCATGCCTTCTGGAACAT...TTGTGGGGTCAGAAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTTTTTGTGAACACACTTaGCTTCTGTGGCACTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VPMLSSTFRVPVTVNLFIFCEHT*LLWHLL Trigger: TAACAAGTGCCACAGAAGCCAAGTGTGTTCACAAAA...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR TCA 90 bp | CACTGTAAATCTCTTTATTTCCAACCATATGGGAAGTGTCTGAAATCACAGTTTCCTCCAGAGAGGACATaGTCAAAGCTTCATGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: HCKSLYFQPYGKCLKSQFPPERT*SKLHVS Trigger: TGACACATGAAGCTTTGATCATGTCCTCTCTGGAGG...AAACTGTGATTTCAGACACTTCCCATATGGTTGGAAATAAAGAGATTTACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | ATCTATATATACACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTCCTCCAGAGAGGACATaGTCAAAGCTTCATGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: IYIYTVWAEATYKCQTLFPPERT*SKLHVS Trigger: TGACACATGAAGCTTTGATCATGTCCTCTCTGGAGG...AAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTGTATATATAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | ATCTATATATACACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTAAAGGGCCTTCAGGGTaGACATGGAGAAGTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: IYIYTVWAEATYKCQTLFKGPSG*TWRSHC Trigger: ACAATGACTTCTCCATGTGCACCCTGAAGGCCCTTT...AAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTGTATATATAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | AAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCCTGTATCTATGGTATACATGAGCTCCTaGCAAAGTTGGACAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: KDVSQACHLFISRSPVSMVYMSS*QSWTNL Trigger: AAGATTTGTCCAACTTTGTCAGGAGCTCATGTATAC...CATAGATACAGGACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR TCA 90 bp | CTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCGGCTTACCACATTTTTaGCAGTTATCTGTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LFALLYVVFLTLGIFDGSGLPHF*QLSVAK Trigger: TTTTGCTACAGATAACTGTCAAAAATGTGGTAAGCC...GGACCCATCAAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR GCA 90 bp | AATATCAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGCTTTGCTCTATGTTGAGGGATCCTATTCTCTaGTTGGCCCAATTCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: NIKSSKLEWKACLLCSMLRDPIL*LAQFKK Trigger: TTTCTTGAATTGGGCCAAGCAGAGAATAGGATCCCT...CAACATAGAGCAAAGCAAACAGGCTTTCCATTCTAGCTTTGAACTCTTGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR GCA 90 bp | AAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTCCTGTATCTATGTGTTTCATGAAGATATaGTGGAGACAGTTGAATTGG | + |
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Preference number: 4 (lower is better) Translates to: KDVSQACHLFISRSPVSMCFMKI*WRQLNW Trigger: CCAATTCAACTGTCTCCAGCATATCTTCATGAAACA...CATAGATACAGGACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| 3UTR CAA 72 bp | CAAGAGTTCAAAGCTAGAATGGAAAGCCTGTTTGCTTaGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: QEFKARMESLFA*LYVVFLTLGIF Trigger: AAAGATGCCTAAAGTTAAGAAGACAACATAGAGCAAAGCAAACAGGCTTTCCATTCTAGCTTTGAACTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCTTTGATTTATTGAAGTaGGAACTGATTGACAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: FLSTADKRCVPSLSFIHIFDLLK*ELIDRL Trigger: CAACCTGTCAATCAGTTCCCACTTCAATAAATCAAA...GATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGCTCAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS GCA 90 bp | GGGGCAGGGTATTGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTaGTGGAAAAGGGCCTTCAGGGTGCACATGGAGAAGTCATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: GAGYCSTFILLQLAV*WKRAFRVHMEKSLL Trigger: CAACAATGACTTCTCCATGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS GCA 90 bp | CATTATAGCACTGCAGAGGGGCAGGGTATTGTTCCACATTCATCTTaGTCCAGTTGGCTGTGTGCTGGAAAAGGGCCTTCAGGGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: HYSTAEGQGIVPHSS*SSWLCAGKGPSGCT Trigger: TGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGTGCTATAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAATGTTAAGCTCAACCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTATAGGGGAGGTATTCTaGTGGAGGGGTGCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPMLSSTFRVPVTVNLFIIGEVF*WRGARK Trigger: CTTCCTGGCACCCCTCCACAAGAATACCTCCCCTAT...AATAAAGAGATTTACAGTGACTGGGACCCTGAAGGTTGAGCTTAACATTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101015.10 |
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| CDS-3UTR CAA 90 bp | GCACTGCAGATAAAAGATGTGTCCCAAGCCTGTCATTTATTCATATCCAGAAGTGCCAGGCTGCCACCATaGCCTTTAGGAGATTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALQIKDVSQACHLFISRSARLPP*PLGDWF Trigger: AAACCAATCTCCTAAAGGCAATGGTGGCAGCCTGGC...ACTTCTGGATATGAATAAATGACAGGCTTGGGACACATCTTTTATCTGCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS-3UTR CAA 90 bp | ATCTATATATACACTGTCTGGGCAGAAGCCACATATAAATGCCAAACTCTTTTTGCCAGGCTGCCACCATaGCCTTTAGGAGATTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYTVWAEATYKCQTLFARLPP*PLGDWF Trigger: AAACCAATCTCCTAAAGGCAATGGTGGCAGCCTGGC...AAAAAGAGTTTGGCATTTATATGTGGCTTCTGCCCAGACAGTGTATATATAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CCA 90 bp | GTGATGTGCTCTGGATCAAAAACATTAAAGATGTCTCTGATAACTTaGTCTGGTGGGTCCCAGATCTTCATCTTTATACAGCAGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: VMCSGSKTLKMSLIT*SGGSQIFIFIQQKY Trigger: ATATTTCTGCTGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTTGATCCAGAGCACATCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS GCA 90 bp | AGTTGTAACAGAGTCCAGTCAGTATTCAGTTCTAATTCTGTGATGTaGTCTGGATCAAAAACATTAAAGATGTCTCTGATAACTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCNRVQSVFSSNSVM*SGSKTLKMSLITWS Trigger: AGACCAAGTTATCAGAGACATCTTTAATGTTTTTGATCCAGAGCACATCACAGAATTAGAACTGAATACTGACTGGACTCTGTTACAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 90 bp | CACTGCAGAGGGGCAGGGTATTGTTCCACATTCATCTTGCTCCAGTaGGCTGTGTGCTGGAAAAGGGCCTTCAGGGTGCACATGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HCRGAGYCSTFILLQ*AVCWKRAFRVHMEK Trigger: CTTCTCCATGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CCA 72 bp | GGGCAGGGTATTGTTCCACATTCATCTTGCTCCAGTTaGCTGTGTGCTGGAAAAGGGCCTTCAGGGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GQGIVPHSSCSS*LCAGKGPSGCT Trigger: TGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 72 bp | CACTGCAGAGGGGCAGGGTATTGTTCCACATTCATCTaGCTCCAGTTGGCTGTGTGCTGGAAAAGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HCRGAGYCSTFI*LQLAVCWKRAF Trigger: GAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 90 bp | TGGAGACAGGGGAAAGGCCAGGCTGCCACCATTGCCTTTAGGAGATaGGTTTGTCTGCCAGCAAAGGCCTCTTTGAATAGTGCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WRQGKGQAATIAFRR*VCLPAKASLNSAGK Trigger: CTTCCCAGCACTATTCAAAGAGGCCTTTGCTGGCAGACAAACCAATCTCCTAAAGGCAATGGTGGCAGCCTGGCCTTTCCCCTGTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 ENSMUST00000185432.2 |
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| CDS GCA 72 bp | ACTGCAGAGGGGCAGGGTATTGTTCCACATTCATCTTaGTCCAGTTGGCTGTGTGCTGGAAAAGGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TAEGQGIVPHSS*SSWLCAGKGPS Trigger: TGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 90 bp | AGAGGGTCTCCAAGGGTGTCATCAGGCACCTGGGGTGAAACTCTCTaGTCAGTCGCATGTCTATTCCATCTAGCAGAGCTTGCAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RGSPRVSSGTWGETL*SVACLFHLAELARF Trigger: AAACCTTGCAAGCTCTGCTAGATGGAATAGACATGCGACTGACAAGAGAGTTTCACCCCAGGTGCCTGATGACACCCTTGGAGACCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160045.2 |
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| CDS CCA 72 bp | TGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTaGAAAAGGGCCTTCAGGGTGCACATGGAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: CSTFILLQLAVC*KRAFRVHMEKS Trigger: TGACTTCTCCATGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 72 bp | GGGAAAGGCCAGGCTGCCACCATTGCCTTTAGGAGATaGGTTTGTCTGCCAGCAAAGGCCTCTTTGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: GKGQAATIAFRR*VCLPAKASLNS Trigger: ACTATTCAAAGAGGCCTTTGCTGGCAGACAAACCAATCTCCTAAAGGCAATGGTGGCAGCCTGGCCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 ENSMUST00000185432.2 |
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| CDS CAA 72 bp | CCAAGGGTGTCATCAGGCACCTGGGGTGAAACTCTCTaGTCAGTCGCATGTCTATTCCATCTAGCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PRVSSGTWGETL*SVACLFHLAEL Trigger: AAGCTCTGCTAGATGGAATAGACATGCGACTGACAAGAGAGTTTCACCCCAGGTGCCTGATGACACCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160045.2 |
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| CDS CAA 90 bp | ACCATTGCCTTTAGGAGATTGGTTTGTCTGCCAGCAAAGGCCTCTTaGAATAGTGCTGGGAAGACCACAGTAGGCAACTCCTCCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TIAFRRLVCLPAKAS*NSAGKTTVGNSSRE Trigger: CTCTCTGGAGGAGTTGCCTACTGTGGTCTTCCCAGCACTATTCAAAGAGGCCTTTGCTGGCAGACAAACCAATCTCCTAAAGGCAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 ENSMUST00000185432.2 |
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| CDS GCA 72 bp | TATTGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTaGTGGAAAAGGGCCTTCAGGGTGCACATGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: YCSTFILLQLAV*WKRAFRVHMEK Trigger: CTTCTCCATGTGCACCCTGAAGGCCCTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 72 bp | ACCCAACTCATTATAGCACTGCAGAGGGGCAGGGTATaGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TQLIIALQRGRV*FHIHLAPVGCV Trigger: CACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGTGCTATAATGAGTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 90 bp | AGAGACATGACCCAACTCATTATAGCACTGCAGAGGGGCAGGGTATaGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDMTQLIIALQRGRV*FHIHLAPVGCVLEK Trigger: CTTTTCCAGCACACAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGCCCCTCTGCAGTGCTATAATGAGTTGGGTCATGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 72 bp | GAACCTGAAGTTTTGCCCTCCTGGGGTGAAACTCTCTaGTCAGTCGCATGTCTATTCCATCTAGCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: EPEVLPSWGETL*SVACLFHLAEL Trigger: AAGCTCTGCTAGATGGAATAGACATGCGACTGACAAGAGAGTTTCACCCCAGGAGGGCAAAACTTCAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 72 bp | CATGGTACATATTTCTCATGTCAAGAACCTGAAGTTTaGCCCTCCTGGGGTGAAACTCTCTTGTCAGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: HGTYFSCQEPEV*PSWGETLLSVA Trigger: TGCGACTGACAAGAGAGTTTCACCCCAGGAGGGCAAAACTTCAGGTTCTTGACATGAGAAATATGTACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS GCA 72 bp | ATGGTACATATTTCTCATGTCAAGAACCTGAAGTTTTaGCCTCCTGGGGTGAAACTCTCTTGTCAGTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: MVHISHVKNLKF*PPGVKLSCQSH Trigger: ATGCGACTGACAAGAGAGTTTCACCCCAGGAGGGCAAAACTTCAGGTTCTTGACATGAGAAATATGTACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 90 bp | CATATCTCGGAAGGACCTTCACTAGCTGCTTTTCATCCAATGTCTTaGATTTATAGTCACTGTCATTTGCATCAGCCCGTATGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HISEGPSLAAFHPMS*IYSHCHLHQPVCSR Trigger: TCTGGAACATACGGGCTGATGCAAATGACAGTGACTATAAATCAAAGACATTGGATGAAAAGCAGCTAGTGAAGGTCCTTCCGAGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 72 bp | TATAGCTCTGAGAGTATACATGAGCTCCTGACAAAGTaGGACAAATCTTTCTACAGAGACATGACCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: YSSESIHELLTK*DKSFYRDMTQL Trigger: GAGTTGGGTCATGTCTCTGTAGAAAGATTTGTCCAACTTTGTCAGGAGCTCATGTATACTCTCAGAGCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000160045.2 |
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| CDS CAA 90 bp | CTAGCTGCTTTTCATCCAATGTCTTTGATTTATAGTCACTGTCATTaGCATCAGCCCGTATGTTCCAGAAGGCATGGTACATATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LAAFHPMSLIYSHCH*HQPVCSRRHGTYFS Trigger: TGAGAAATATGTACCATGCCTTCTGGAACATACGGGCTGATGCAAATGACAGTGACTATAAATCAAAGACATTGGATGAAAAGCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 72 bp | TTTCATCCAATGTCTTTGATTTATAGTCACTGTCATTaGCATCAGCCCGTATGTTCCAGAAGGCATGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: FHPMSLIYSHCH*HQPVCSRRHGT Trigger: TGTACCATGCCTTCTGGAACATACGGGCTGATGCAAATGACAGTGACTATAAATCAAAGACATTGGATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 90 bp | TGTGATGTGCTCTGGATCAAAAACATTAAAGATGTCTCTGATAACTaGGTCTGGTGGGTCCCAGATCTTCATCTTTATACAGCAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: CDVLWIKNIKDVSDN*VWWVPDLHLYTAEI Trigger: TATTTCTGCTGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTTGATCCAGAGCACATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CCA 72 bp | TCTGGATCAAAAACATTAAAGATGTCTCTGATAACTTaGTCTGGTGGGTCCCAGATCTTCATCTTTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSKTLKMSLIT*SGGSQIFIFIQ Trigger: CTGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTTGATCCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CAA 72 bp | CTCTGGATCAAAAACATTAAAGATGTCTCTGATAACTaGGTCTGGTGGGTCCCAGATCTTCATCTTTATACA | + |
|
Preference number: 6 (lower is better) Translates to: LWIKNIKDVSDN*VWWVPDLHLYT Trigger: TGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTTGATCCAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CCA 72 bp | ATCAAAAACATTAAAGATGTCTCTGATAACTTGGTCTaGTGGGTCCCAGATCTTCATCTTTATACAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: IKNIKDVSDNLV*WVPDLHLYTAE Trigger: TTCTGCTGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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| CDS CCA 72 bp | AAAAACATTAAAGATGTCTCTGATAACTTGGTCTGGTaGGTCCCAGATCTTCATCTTTATACAGCAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: KNIKDVSDNLVW*VPDLHLYTAEI Trigger: TATTTCTGCTGTATAAAGATGAAGATCTGGGACCCACCAGACCAAGTTATCAGAGACATCTTTAATGTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101015.10 ENSMUST00000185432.2 |
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