Pregenerated sensors for PRAMEL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073724Ensembl transcript IDs: ENSMUST00000084191.3, ENSMUST00000091676.12, ENSMUST00000094520.5, ENSMUST00000133626.8, ENSMUST00000156324.3
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTCAGCCCAGGCAGAAGGTCACGGATTCGGGAGTCCGTGAGGTaGAAGCACTCCAATTTTAATGTCTGCAGAGTAGCTGTCAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: WLSPGRRSRIRESVR*KHSNFNVCRVAVSL Trigger: AAGACTGACAGCTACTCTGCAGACATTAAAATTGGAGTGCTTTCACCTCACGGACTCCCGAATCCGTGACCTTCTGCCTGGGCTGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR TCA 90 bp | ATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAGAGCAGTCGGGTGTTCCTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLWMVVSHHVGAGI*TSNLRKSSRVFLPT Trigger: AGTGGGTAGGAACACCCGACTGCTCTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCACATGGTGGCTCACAACCATCCATAGCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 90 bp | GCAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTTaGAGCAGCGTTTTCAGGCTGACCATGGAAAATTTGTTCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: AGYFSRVSCVRLAVC*SSVFRLTMENLFST Trigger: TGTGGAGAACAAATTTTCCATGGTCAGCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 90 bp | TCTGTCTGGAATAACACAAAGACTGTCATCATAGACTTCATCAGGTaGAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATG | + |
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Preference number: 1 (lower is better) Translates to: SVWNNTKTVIIDFIR*RVLLQGQLCEVGSM Trigger: CATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGCACCTGATGAAGTCTATGATGACAGTCTTTGTGTTATTCCAGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 90 bp | ACAAAAGACAACTTCAACAACCGCCACAACTTCAGTCGGAGACAGTaGTTGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGTATCACA | + |
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Preference number: 1 (lower is better) Translates to: TKDNFNNRHNFSRRQ*LPVNSSFSKITCIT Trigger: TGTGATACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTGTCTCCGACTGAAGTTGTGGCGGTTGTTGAAGTTGTCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 90 bp | TTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTaGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: LSPSLLLVSLILRQC*NAALQFSDTIAVKG Trigger: CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR CCA 90 bp | GGTCTCCTGATGTTCATGAGAATGAGTTTCTGGAGGTTTTTCATCTaGCCCAGGCAAGAGGCTATCAATGCAAGGTTATATATATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GLLMFMRMSFWRFFI*PRQEAINARLYISQ Trigger: CTGGGATATATATAACCTTGCATTGATAGCCTCTTGCCTGGGCCAGATGAAAAACCTCCAGAAACTCATTCTCATGAACATCAGGAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 90 bp | GAGTTTCTGGAGGTTTTTCATCTGGCCCAGGCAAGAGGCTATCAATaGAAGGTTATATATATCCCAGTGTATGGACTTTATTGTCAATTC | + |
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Preference number: 1 (lower is better) Translates to: EFLEVFHLAQARGYQ*KVIYIPVYGLYCQF Trigger: GAATTGACAATAAAGTCCATACACTGGGATATATATAACCTTGCATTGATAGCCTCTTGCCTGGGCCAGATGAAAAACCTCCAGAAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 90 bp | CCAGGCAAGAGGCTATCAATGCAAGGTTATATATATCCCAGTGTATaGACTTTATTGTCAATTCCTGGATTGAGGCTACAAAAGACAACT | + |
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Preference number: 1 (lower is better) Translates to: PGKRLSMQGYIYPSV*TLLSIPGLRLQKTT Trigger: AGTTGTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGATATATATAACCTTGCATTGATAGCCTCTTGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 90 bp | ACTCCAGCTTCTCAAAGATCACCTGTATCACATCTTTTCTCTGCTTaGCCCAATAATACAAATAGTTTAGGTTTTCACAATGAGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TPASQRSPVSHLFSA*PNNTNSLGFHNESV Trigger: GACACTCTCATTGTGAAAACCTAAACTATTTGTATTATTGGGCCAAGCAGAGAAAAGATGTGATACAGGTGATCTTTGAGAAGCTGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR TCA 90 bp | AGATACCATGCCCTCCAAATTATACACGAGGTATTCAAAATTAGGTaGATATATTGTACTCTCAAAATAGACCTGCTTTGGCTGCCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: RYHALQIIHEVFKIR*IYCTLKIDLLWLPY Trigger: GTAAGGCAGCCAAAGCAGGTCTATTTTGAGAGTACAATATATTCACCTAATTTTGAATACCTCGTGTATAATTTGGAGGGCATGGTATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTTGCAGCAGCGAGCTGATGGATGCTTaGACACTGGGACAGATACCT | + |
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Preference number: 2 (lower is better) Translates to: AGYFSRVSCVRLAVCCSSELMDA*TLGQIP Trigger: AGGTATCTGTCCCAGTGTCCAAGCATCCATCAGCTC...GCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CAA 90 bp | TGCAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTaGCAGCAGCGTTTTCAGGCTGACCATGGAAAATTTGTTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CRVLLQGQLCEVGSM*QQRFQADHGKFVLH Trigger: GTGGAGAACAAATTTTCCATGGTCAGCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CAA 90 bp | ACTTCATCAGGTGCAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTaGGCAGTATGTTGCAGCAGCGTTTTCAGGCTGACCATGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TSSGAGYFSRVSCVR*AVCCSSVFRLTMEN Trigger: ATTTTCCATGGTCAGCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGCACCTGATGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | TACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTTGCAGCAGCGTTTTCGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YFSRVSCVRLAVCCSSVFVGAGI*TSNLRK Trigger: CTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCAC...GAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SITLMNLLRPALHLSEPSVGAGI*TSNLRK Trigger: CTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCAC...GCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGGTGTTCCTACCCACTaGTATATATCACCATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTGVPTH*YISPSH Trigger: GTGGGATGGTGATATATATCAGTGGGTAGGAACACC...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CAA 90 bp | AAAGACAACTTCAACAACCGCCACAACTTCAGTCGGAGACAGTGCTaGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGTATCACATCT | + |
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Preference number: 2 (lower is better) Translates to: KDNFNNRHNFSRRQC*PVNSSFSKITCITS Trigger: AGATGTGATACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTGTCTCCGACTGAAGTTGTGGCGGTTGTTGAAGTTGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCCATCTGCAGGGAGAATGAAACAGAGACCTCCTATTCAAGTCCATTATGATGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MPSAGRMKQRPPIQVHYDVGAGI*TSNLRK Trigger: CTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCAC...ATCATAATGGACTTGAATAGGAGGTCTCTGTTTCATTCTCCCTGCAGATGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCCTGAAAATAAGGTCATaGTTTTCCATCTCAACACAA | + |
|
Preference number: 2 (lower is better) Translates to: QKRESDLAMDGCEPPCGCLKIRS*FSISTQ Trigger: TTGTGTTGAGATGGAAAACCATGACCTTATTTTCAG...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | AATATATCCATATACTCTAGAACAGTAAGGGGAGAGCCAAAAGGTGGATGCCATGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NISIYSRTVRGEPKGGCHVGAGI*TSNLRK Trigger: CTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCAC...ATGGCATCCACCTTTTGGCTCTCCCCTTACTGTTCTAGAGTATATGGATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR GCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAAGGTGGATGCCATCTaGAGGGAGAATGAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDKVDAI*RENETE Trigger: CTCTGTTTCATTCTCCCTGCAGATGGCATCCACCTT...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAGTGCTTGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGTATCACATCTGTCGTCGGCAGTACTTaGGGGAAAGATTCATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: RQCLPVNSSFSKITCITSVVGST*GKDSFL Trigger: TAAAAATGAATCTTTCCCTCAAGTACTGCCGACGAC...AGATGTGATACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGAAAATAGACCTGCTTTaGCTGCCTTACACCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RQCWNAALQFSDTIAVKGKIDLL*LPYTLE Trigger: CTCAAGGGTGTAAGGCAGCCAAAGCAGGTCTATTTT...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGGATGACTTGAAGGCTTaGATGTGGTGTAACTCATGT | + |
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Preference number: 2 (lower is better) Translates to: RQCWNAALQFSDTIAVKGDDLKA*MWCNSC Trigger: ACATGAGTTACACCACATTCAAGCCTTCAAGTCATC...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGGGAGCTTATGCAGTTTaGAGAACTCGGAAAAGATCT | + |
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Preference number: 2 (lower is better) Translates to: RQCWNAALQFSDTIAVKGGAYAV*RTRKRS Trigger: AGATCTTTTCCGAGTTCTCCAAACTGCATAAGCTCC...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAACAGTCTAATACAATTTAGGTTTTCACAATaGGAGTGTCGTCGGCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LDLPKKEIQLNSDNSLIQFRFSQ*ECRRQY Trigger: GTACTGCCGACGACACTCTCATTGTGAAAACCTAAA...TTGTATTAGACTGTTATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR GCA 90 bp | GCATTAGGTCCAGGCGTTCTTTCAGGAAGTAGACATCATTCACATAGAGATGCTGCAAGAGGCTATCAATaGAAGGTTATATATATCCCA | + |
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Preference number: 2 (lower is better) Translates to: ALGPGVLSGSRHHSHRDAARGYQ*KVIYIP Trigger: TGGGATATATATAACCTTGCATTGATAGCCTCTTGC...AGCATCTCTATGTGAATGATGTCTACTTCCTGAAAGAACGCCTGGACCTAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTTTATTGTCAATTCCTaGATTGAGGCTACAAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RQCWNAALQFSDTIAVKGFIVNS*IEATKD Trigger: GTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAA...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTAATGAGAATGAGTTTCTaGAGGTTTTTCATCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TVDIRLKIRSWFSISTQLMRMSF*RFFIWP Trigger: GGGCCAGATGAAAAACCTCCAGAAACTCATTCTCAT...TAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTCTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTACTGCTGAAAATAAGGTCATaGTTTTCCATCTCAACACAA | + |
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Preference number: 2 (lower is better) Translates to: MQPYNFQIQLLLKGVSVLLKIRS*FSISTQ Trigger: TTGTGTTGAGATGGAAAACCATGACCTTATTTTCAG...CAGTACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR TCA 72 bp | CATCAGGTGCAGGGTACTTCTCCAGGGTCAGCTGTGTaGGGTTGGCAGTATGTTGCAGCAGCGTTTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HQVQGTSPGSAV*GWQYVAAAFSG Trigger: GCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGCACCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCGTCAGCTGTGTGAGGTaGGCAGTATGTTGCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QKRESDLAMDGCEPPCGCVSCVR*AVCCSS Trigger: GCTGCTGCAACATACTGCCAACCTCACACAGCTGAC...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR TCA 72 bp | TGGATGGTTGTGAGCCACCATGTGGGTGCTGGGATTTaGACTTCTAACCTTCGGAAGAGCAGTCGGGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: WMVVSHHVGAGI*TSNLRKSSRVF Trigger: GAACACCCGACTGCTCTTCCGAAGGTTAGAAGTTCAAATCCCAGCACCCACATGGTGGCTCACAACCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR TCA 72 bp | TCAGCCCAGGCAGAAGGTCACGGATTCGGGAGTCCGTaGGGTGAAAGCACTCCAATTTTAATGTCTGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SAQAEGHGFGSP*GESTPILMSAE Trigger: CTCTGCAGACATTAAAATTGGAGTGCTTTCACCTCACGGACTCCCGAATCCGTGACCTTCTGCCTGGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 72 bp | GAAAATTTGTTCTCCACAAAATCGACTTCAGTGAGCTaGGAACACTGGCTCAGCCCAGGCAGAAGGTCACGG | + |
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Preference number: 3 (lower is better) Translates to: ENLFSTKSTSVS*EHWLSPGRRSR Trigger: CCGTGACCTTCTGCCTGGGCTGAGCCAGTGTTCCCAGCTCACTGAAGTCGATTTTGTGGAGAACAAATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 72 bp | TTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTTaGAGCAGCGTTTTCAGGCTGACCATGGAAAATTTG | + |
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Preference number: 3 (lower is better) Translates to: FSRVSCVRLAVC*SSVFRLTMENL Trigger: CAAATTTTCCATGGTCAGCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR TCA 72 bp | GGAGAGCCAAAAGGTGGATGCCATCTGCAGGGAGAATaGAACAGAGACCTCCTATTCAAGTCCATTATGATC | + |
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Preference number: 3 (lower is better) Translates to: GEPKGGCHLQGE*NRDLLFKSIMI Trigger: GATCATAATGGACTTGAATAGGAGGTCTCTGTTTCATTCTCCCTGCAGATGGCATCCACCTTTTGGCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR GCA 72 bp | AATAACACAAAGACTGTCATCATAGACTTCATCAGGTaGAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: NNTKTVIIDFIR*RVLLQGQLCEV Trigger: AACCTCACACAGCTGACCCTGGAGAAGTACCCTGCACCTGATGAAGTCTATGATGACAGTCTTTGTGTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 72 bp | CCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTaGTGGAATGCAGCCCTACAATTTTCAGATACAATT | + |
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Preference number: 3 (lower is better) Translates to: PSLLLVSLILRQ*WNAALQFSDTI Trigger: AATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR CCA 72 bp | TCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTaGAATGCAGCCCTACAATTTTCAGATACAATTGCT | + |
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Preference number: 3 (lower is better) Translates to: SLLLVSLILRQC*NAALQFSDTIA Trigger: AGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
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| 3UTR-3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGCTGACCATGGAAAATTaGTTCTCCACAAAATCGACT | + |
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Preference number: 3 (lower is better) Translates to: YTVAVFRQSRRGSQILLWLTMEN*FSTKST Trigger: AGTCGATTTTGTGGAGAACAAATTTTCCATGGTCAG...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR GCA 72 bp | GAGGTTTTTCATCTGGCCCAGGCAAGAGGCTATCAATaGAAGGTTATATATATCCCAGTGTATGGACTTTAT | + |
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Preference number: 3 (lower is better) Translates to: EVFHLAQARGYQ*KVIYIPVYGLY Trigger: ATAAAGTCCATACACTGGGATATATATAACCTTGCATTGATAGCCTCTTGCCTGGGCCAGATGAAAAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 72 bp | ATGTTCATGAGAATGAGTTTCTGGAGGTTTTTCATCTaGCCCAGGCAAGAGGCTATCAATGCAAGGTTATAT | + |
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Preference number: 3 (lower is better) Translates to: MFMRMSFWRFFI*PRQEAINARLY Trigger: ATATAACCTTGCATTGATAGCCTCTTGCCTGGGCCAGATGAAAAACCTCCAGAAACTCATTCTCATGAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| 3UTR CCA 72 bp | TCTCAAAGATCACCTGTATCACATCTTTTCTCTGCTTaGCCCAATAATACAAATAGTTTAGGTTTTCACAAT | + |
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Preference number: 3 (lower is better) Translates to: SQRSPVSHLFSA*PNNTNSLGFHN Trigger: ATTGTGAAAACCTAAACTATTTGTATTATTGGGCCAAGCAGAGAAAAGATGTGATACAGGTGATCTTTGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| CDS-3UTR TCA 90 bp | TGCAGGGTACTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTTGCAGCAGCCCCCTGGGATGGGATaGTTTCCCACTGGTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CRVLLQGQLCEVGSMLQQPPGMG*FPTGWF Trigger: GAACCAACCAGTGGGAAATCATCCCATCCCAGGGGG...CTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAGTACCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCCCCCCTGGGATGGGATaGTTTCCCACTGGTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLAMDGCEPPCGCPPGMG*FPTGWF Trigger: GAACCAACCAGTGGGAAATCATCCCATCCCAGGGGG...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCCAGCTGCTGGAGTGTTaGTGGGTCCTTGAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLAMDGCEPPCGCQLLEC*WVLEAH Trigger: ATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTG...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCTCCAGGTATTTGAGCTaGTGGATGCTTGGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLAMDGCEPPCGCSRYLS*WMLGHW Trigger: CCAGTGTCCAAGCATCCATCAGCTCAAATACCTGGA...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACACCCCCTGGGATGGGATaGTTTCCCACTGGTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTPPGMG*FPTGWF Trigger: GAACCAACCAGTGGGAAATCATCCCATCCCAGGGGG...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCCCCTGGGATGGGATaGTTTCCCACTGGTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQTIQKRESDLAMDGCEPPGMG*FPTGWF Trigger: GAACCAACCAGTGGGAAATCATCCCATCCCAGGGGG...CTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGTCCCACAGGAAGGACTaGGAAGGGCCATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLQTIQKRESDLAMDGCESHRKD*EGPCCH Trigger: GTGGCAACATGGCCCTTCCCAGTCCTTCCTGTGGGA...CTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | CTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAATTCAGGGTCTCCAGGTaGTCAATCCCACACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPFPTSSVPHTQTVLEFRVSR*SIPHRA Trigger: AGCTCTGTGTGGGATTGATCACCTGGAGACCCTGAA...TTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCTTCTTGCCAGCTGCTaGAGTGTTGGTGGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQTIQKRESDLAMDGCELLASC*SVGGSL Trigger: CAAGGACCCACCAACACTCCAGCAGCTGGCAAGAAG...CTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| 3UTR CAA 72 bp | CTTCTCCAGGGTCAGCTGTGTGAGGTTGGCAGTATGTaGCAGCAGCGTTTTCAGGCTGACCATGGAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQGQLCEVGSM*QQRFQADHGKF Trigger: AAATTTTCCATGGTCAGCCTGAAAACGCTGCTGCAACATACTGCCAACCTCACACAGCTGACCCTGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGCAGCTGCTGGAGTGTTaGTGGGTCCTTGAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRQSRRGSQILLWQLLEC*WVLEAH Trigger: ATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTG...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTCCCACAGGAAGGACTaGGAAGGGCCATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQCWNAALQFSDTIAVKGSHRKD*EGPCCH Trigger: GTGGCAACATGGCCCTTCCCAGTCCTTCCTGTGGGA...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| 3UTR CAA 72 bp | TTCAACAACCGCCACAACTTCAGTCGGAGACAGTGCTaGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNNRHNFSRRQC*PVNSSFSKITC Trigger: ACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTGTCTCCGACTGAAGTTGTGGCGGTTGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAATTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIPFPTSSVPHTQTVLELSAGE*ILEEWW Trigger: CCACCACTCTTCAAGGATGCATTCACCAGCAGACAA...TTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | TGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTTCCCACAGGAAGGACTaGGAAGGGCCATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WNAALQFSDTIAVKGCVCSHRKD*EGPCCH Trigger: GTGGCAACATGGCCCTTCCCAGTCCTTCCTGTGGGA...ACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGCTGCTGGAGTGTTGGTaGGTCCTTGAAGCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRQSRRGSQILLWLLECW*VLEAHC Trigger: ACAATGAGCTTCAAGGACCCACCAACACTCCAGCAG...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCTTTATTGTCAATTCCTaGATTGAGGAGTGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLAMDGCEPPCGCFIVNS*IEECLP Trigger: AGGCAAGCACTCCTCAATCCAGGAATTGACAATAAA...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATTTCAGGGTCTCCAGGTaGTCAATCCCACACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDFRVSR*SIPHRA Trigger: AGCTCTGTGTGGGATTGATCACCTGGAGACCCTGAA...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | TTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAATGCTTTAGGTTTTCACAATaGGAGTGTCGTCGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FIPFPTSSVPHTQTVLECFRFSQ*ECRRQY Trigger: GTACTGCCGACGACACTCTCATTGTGAAAACCTAAA...GCATTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGTCATGTCCAGGTATTTaGGCTGATGGATGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRQSRRGSQILLWSCPGI*ADGCLD Trigger: GTCCAAGCATCCATCAGCTCAAATACCTGGACATGA...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCGCAAGAGGCTATCAATaGAAGGTTATATATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLAMDGCEPPCGCARGYQ*KVIYIP Trigger: TGGGATATATATAACCTTGCATTGATAGCCTCTTGC...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAATAGACTTCATCAGGTaGAGGGTACTTCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTIDFIR*RVLLQG Trigger: ACCCTGGAGAAGTACCCTGCACCTGATGAAGTCTAT...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATCAGCTGCTGGAGTGTTaGTGGGTCCTTGAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDQLLEC*WVLEAH Trigger: ATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTG...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | TCTATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCGAGCTGATGGATGCTTaGACACTGGGACAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: SITLMNLLRPALHLSEPSELMDA*TLGQIP Trigger: AGGTATCTGTCCCAGTGTCCAAGCATCCATCAGCTC...GCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACATTTAGGTTTTCACAATaGGAGTGTCGTCGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTFRFSQ*ECRRQY Trigger: GTACTGCCGACGACACTCTCATTGTGAAAACCTAAA...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGTTTAGGTTTTCACAATaGGAGTGTCGTCGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRQSRRGSQILLWFRFSQ*ECRRQY Trigger: GTACTGCCGACGACACTCTCATTGTGAAAACCTAAA...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAAGCTCAGAAGATACCATaGCCTCCAAATTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: LFIPFPTSSVPHTQTVLEAQKIP*PPNYTR Trigger: TCGTGTATAATTTGGAGGGCATGGTATCTTCTGAGC...TTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAAAAATAGACCTGCTTTaGCTGCCTTACACCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTKIDLL*LPYTLE Trigger: CTCAAGGGTGTAAGGCAGCCAAAGCAGGTCTATTTT...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAGGTCGATCCTTTTGTaGCATCAGCAAATCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDRSILL*HQQIKA Trigger: GGCCTTGATTTGCTGATGTCACAAAAGGATCGACCT...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTCACTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTCGTCGGCAGTACTTaGGGGAAAGATTCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MSSLFIPFPTSSVPHTQTVVGST*GKDSFL Trigger: TAAAAATGAATCTTTCCCTCAAGTACTGCCGACGAC...TGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAGTGAGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | AATATATCCATATACTCTAGAACAGTAAGGGGAGAGCCAAAAGGTGGATGCCATTCCAGGTATTTGAGCTaGTGGATGCTTGGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NISIYSRTVRGEPKGGCHSRYLS*WMLGHW Trigger: CCAGTGTCCAAGCATCCATCAGCTCAAATACCTGGA...ATGGCATCCACCTTTTGGCTCTCCCCTTACTGTTCTAGAGTATATGGATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTACTGAGGTTGGCAGTATGTTaGAGCAGCGTTTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MQPYNFQIQLLLKGVSVLRLAVC*SSVFRL Trigger: CAGCCTGAAAACGCTGCTGCAACATACTGCCAACCT...CAGTACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGATAGACTTCATCAGGTaGAGGGTACTTCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQCWNAALQFSDTIAVKGIDFIR*RVLLQG Trigger: ACCCTGGAGAAGTACCCTGCACCTGATGAAGTCTAT...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | GACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAACAGCTGCTGGAGTGTTaGTGGGTCCTTGAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DIRLKIRSWFSISTQLPQQLLEC*WVLEAH Trigger: ATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTG...TTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGAGCTGATGGATGCTTaGACACTGGGACAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQCWNAALQFSDTIAVKELMDA*TLGQIP Trigger: AGGTATCTGTCCCAGTGTCCAAGCATCCATCAGCTC...TTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | TCTATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCAAAATAGACCTGCTTTaGCTGCCTTACACCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SITLMNLLRPALHLSEPSKIDLL*LPYTLE Trigger: CTCAAGGGTGTAAGGCAGCCAAAGCAGGTCTATTTT...GCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTATTCAGGGTCTCCAGGTaGTCAATCCCACACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVDIRLKIRSWFSISTQLFRVSR*SIPHRA Trigger: AGCTCTGTGTGGGATTGATCACCTGGAGACCCTGAA...TAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTCTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | AATATATCCATATACTCTAGAACAGTAAGGGGAGAGCCAAAAGGTGGATGCCATTCATGTCCAGGTATTTaGGCTGATGGATGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NISIYSRTVRGEPKGGCHSCPGI*ADGCLD Trigger: GTCCAAGCATCCATCAGCTCAAATACCTGGACATGA...ATGGCATCCACCTTTTGGCTCTCCCCTTACTGTTCTAGAGTATATGGATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATTGTCAATTCCTGGATTaGGGAGTGCTTGCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDCQFLD*GVLACK Trigger: TTTACAGGCAAGCACTCCTCAATCCAGGAATTGACA...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGTGGGAAGGGCCATGTTaGCACCATCAGGCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGWEGPC*HHQAQD Trigger: ATCCTGAGCCTGATGGTGGCAACATGGCCCTTCCCA...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | TTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAATGCTCCAATTTTAATGTCTaGAGAGTAGCTGTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIPFPTSSVPHTQTVLECSNFNV*RVAVSL Trigger: AAGACTGACAGCTACTCTGCAGACATTAAAATTGGA...GCATTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | CAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATTTATTGTCAATTCCTaGATTGAGGCTACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTIQKRESDLAMDGCEPPFIVNS*IEATKD Trigger: GTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAA...TGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAAAATAGACCTGCTTTaGCTGCCTTACACCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDKIDLL*LPYTLE Trigger: CTCAAGGGTGTAAGGCAGCCAAAGCAGGTCTATTTT...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | GACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAAGGTCGATCCTTTTGTaGCATCAGCAAATCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DIRLKIRSWFSISTQLPQRSILL*HQQIKA Trigger: GGCCTTGATTTGCTGATGTCACAAAAGGATCGACCT...TTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | GACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAATCATGTCCAGGTATTTaGGCTGATGGATGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DIRLKIRSWFSISTQLPQSCPGI*ADGCLD Trigger: GTCCAAGCATCCATCAGCTCAAATACCTGGACATGA...TTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATGATGACTTGAAGGCTTaGATGTGGTGTAACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDDDLKA*MWCNSC Trigger: ACATGAGTTACACCACATTCAAGCCTTCAAGTCATC...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTAAGGTTGGCAGTATGTTaGAGCAGCGTTTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVDIRLKIRSWFSISTQLRLAVC*SSVFRL Trigger: CAGCCTGAAAACGCTGCTGCAACATACTGCCAACCT...TAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTCTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGGCTCAGAAGATACCATaGCCTCCAAATTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: RQCWNAALQFSDTIAVKGAQKIP*PPNYTR Trigger: TCGTGTATAATTTGGAGGGCATGGTATCTTCTGAGC...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTTATCCCCTTCCCTACTTCTAGTGTCCCTCATACTCAGACAGTGCTGGAATTGTACAAATCTGTCTaGAATAACACAAAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFIPFPTSSVPHTQTVLELYKSV*NNTKTV Trigger: GACAGTCTTTGTGTTATTCCAGACAGATTTGTACAA...TTCCAGCACTGTCTGAGTATGAGGGACACTAGAAGTAGGGAAGGGGATAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGTCCAGGTATTTGAGCTaGTGGATGCTTGGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGSRYLS*WMLGHW Trigger: CCAGTGTCCAAGCATCCATCAGCTCAAATACCTGGA...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | TGTATGGACTTTATTGTCAATTCCTGGATTGAGGCTACAAAAGACAACTTCAACTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMDFIVNSWIEATKDNFNLSAGE*ILEEWW Trigger: CCACCACTCTTCAAGGATGCATTCACCAGCAGACAA...GTTGAAGTTGTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAAGTCCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTACTGGCTCAGAAGATACCATaGCCTCCAAATTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: MQPYNFQIQLLLKGVSVLAQKIP*PPNYTR Trigger: TCGTGTATAATTTGGAGGGCATGGTATCTTCTGAGC...CAGTACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | TGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTATGAGAATGAGTTTCTaGAGGTTTTTCATCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WNAALQFSDTIAVKGCVCMRMSF*RFFIWP Trigger: GGGCCAGATGAAAAACCTCCAGAAACTCATTCTCAT...ACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | AATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAATCAGAAGAATTTGTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKVMVFHLNTTTSNQKNLLSAGE*ILEEWW Trigger: CCACCACTCTTCAAGGATGCATTCACCAGCAGACAA...CAAATTCTTCTGATTTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGLSAGE*ILEEWW Trigger: CCACCACTCTTCAAGGATGCATTCACCAGCAGACAA...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGATAGACTTCATCAGGTaGAGGGTACTTCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGIDFIR*RVLLQG Trigger: ACCCTGGAGAAGTACCCTGCACCTGATGAAGTCTAT...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAACAGTCTAATACAAATGAGAATGAGTTTCTaGAGGTTTTTCATCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLPKKEIQLNSDNSLIQMRMSF*RFFIWP Trigger: GGGCCAGATGAAAAACCTCCAGAAACTCATTCTCAT...TTGTATTAGACTGTTATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | GACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAGGAGCTTATGCAGTTTaGAGAACTCGGAAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DIRLKIRSWFSISTQLPQGAYAV*RTRKRS Trigger: AGATCTTTTCCGAGTTCTCCAAACTGCATAAGCTCC...TTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAACAGTCTAATACAAGGAGCTTATGCAGTTTaGAGAACTCGGAAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLPKKEIQLNSDNSLIQGAYAV*RTRKRS Trigger: AGATCTTTTCCGAGTTCTCCAAACTGCATAAGCTCC...TTGTATTAGACTGTTATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTAGTCGTCGGCAGTACTTaGGGGAAAGATTCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TVDIRLKIRSWFSISTQLVVGST*GKDSFL Trigger: TAAAAATGAATCTTTCCCTCAAGTACTGCCGACGAC...TAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTCTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | AATATATCCATATACTCTAGAACAGTAAGGGGAGAGCCAAAAGGTGGATGCCATGCAAGAGGCTATCAATaGAAGGTTATATATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NISIYSRTVRGEPKGGCHARGYQ*KVIYIP Trigger: TGGGATATATATAACCTTGCATTGATAGCCTCTTGC...ATGGCATCCACCTTTTGGCTCTCCCCTTACTGTTCTAGAGTATATGGATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | CTCAGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAATCCAATTTTAATGTCTaGAGAGTAGCTGTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQCWNAALQFSDTIAVKSNFNV*RVAVSL Trigger: AAGACTGACAGCTACTCTGCAGACATTAAAATTGGA...TTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | ATGCCATCTGCAGGGAGAATGAAACAGAGACCTCCTATTCAAGTCCATTATGATTTTATTGTCAATTCCTaGATTGAGGCTACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MPSAGRMKQRPPIQVHYDFIVNS*IEATKD Trigger: GTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAA...ATCATAATGGACTTGAATAGGAGGTCTCTGTTTCATTCTCCCTGCAGATGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CCA 90 bp | ATGCCATCTGCAGGGAGAATGAAACAGAGACCTCCTATTCAAGTCCATTATGATTTGTACAAATCTGTCTaGAATAACACAAAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPSAGRMKQRPPIQVHYDLYKSV*NNTKTV Trigger: GACAGTCTTTGTGTTATTCCAGACAGATTTGTACAA...ATCATAATGGACTTGAATAGGAGGTCTCTGTTTCATTCTCCCTGCAGATGGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGGTCGTCGGCAGTACTTaGGGGAAAGATTCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGVVGST*GKDSFL Trigger: TAAAAATGAATCTTTCCCTCAAGTACTGCCGACGAC...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR TCA 90 bp | AATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAATCAGAAGAATTTGGATGACTTGAAGGCTTaGATGTGGTGTAACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NKVMVFHLNTTTSNQKNLDDLKA*MWCNSC Trigger: ACATGAGTTACACCACATTCAAGCCTTCAAGTCATC...CAAATTCTTCTGATTTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | AATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAATCAGAAGAATTTGGCAAGAGGCTATCAATaGAAGGTTATATATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKVMVFHLNTTTSNQKNLARGYQ*KVIYIP Trigger: TGGGATATATATAACCTTGCATTGATAGCCTCTTGC...CAAATTCTTCTGATTTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGTCCAATTTTAATGTCTaGAGAGTAGCTGTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGSNFNV*RVAVSL Trigger: AAGACTGACAGCTACTCTGCAGACATTAAAATTGGA...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| 3UTR CAA 72 bp | ATGCAAGGTTATATATATCCCAGTGTATGGACTTTATaGTCAATTCCTGGATTGAGGCTACAAAAGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: MQGYIYPSVWTL*SIPGLRLQKTT Trigger: AGTTGTCTTTTGTAGCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGATATATATAACCTTGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGTTGTACAAATCTGTCTaGAATAACACAAAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRQSRRGLYKSV*NNTKTV Trigger: GACAGTCTTTGTGTTATTCCAGACAGATTTGTACAA...CCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS GCA 90 bp | TGTTGCCACCATCAGGCTCAGGATCTTACGTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGGGAAGAGTTGCACAGGCAGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCHHQAQDLTLSAGE*ILEEWWEELHRQVR Trigger: CCGAACCTGCCTGTGCAACTCTTCCCACCACTCTTCAAGGATGCATTCACCAGCAGACAACGTAAGATCCTGAGCCTGATGGTGGCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000133626.8 |
||
| CDS GCA 90 bp | GCAAATCAAGCACTTGTAGGTTCCACCTGGTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGGGAAGAGTTGCACAGGCAGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ANQALVGSTWLSAGE*ILEEWWEELHRQVR Trigger: CCGAACCTGCCTGTGCAACTCTTCCCACCACTCTTCAAGGATGCATTCACCAGCAGACAACCAGGTGGAACCTACAAGTGCTTGATTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCTGGGAAGGGCCATGTaGCCACCATCAGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLQTIQKRESDLAMDGCELGRAM*PPSGSG Trigger: TCCTGAGCCTGATGGTGGCAACATGGCCCTTCCCAG...CTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCATGTGGGTGCTGGATTGAGGAGTGCTaGCCTGTAAACTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKRESDLAMDGCEPPCGCWIEEC*PVNSSF Trigger: GAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCA...GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
||
| CDS-3UTR CAA 90 bp | CAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGCCACCAAGTCGGAGACAGTGCTaGCCTGTAAACTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTIQKRESDLAMDGCEPPSRRQC*PVNSSF Trigger: GAAGCTGGAGTTTACAGGCAAGCACTGTCTCCGACT...TGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS GCA 90 bp | GAGATAGTCAAGGCTTCATCTTTTAGCAGGCTTCTTCTTGCCAGCTaGTGGAGTGTTGGTGGGTCCTTGAAGCTCATTGTAGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EIVKASSFSRLLLAS*WSVGGSLKLIVAFR Trigger: CCTGAAAGCTACAATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTGGCAAGAAGAAGCCTGCTAAAAGATGAAGCCTTGACTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
||
| CDS-3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGTTAGCAGGCTTCTTCTaGCCAGCTGCTGGAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YTVAVFRQSRRGSQILLWLAGFF*PAAGVL Trigger: CAACACTCCAGCAGCTGGCAAGAAGAAGCCTGCTAA...CCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACAGCTACAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCAGACAATCCAGAAGAGGGAGTCAGATCTTGCTATGGATGGTTGTGAGTTAGCAGGCTTCTTCTaGCCAGCTGCTGGAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLQTIQKRESDLAMDGCELAGFF*PAAGVL Trigger: CAACACTCCAGCAGCTGGCAAGAAGAAGCCTGCTAA...CTCACAACCATCCATAGCAAGATCTGACTCCCTCTTCTGGATTGTCTGAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CAA 90 bp | TGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTCTGGGAAGGGCCATGTaGCCACCATCAGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WNAALQFSDTIAVKGCVCLGRAM*PPSGSG Trigger: TCCTGAGCCTGATGGTGGCAACATGGCCCTTCCCAG...ACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CAA 90 bp | TCTATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCTTAGCAGGCTTCTTCTaGCCAGCTGCTGGAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SITLMNLLRPALHLSEPSLAGFF*PAAGVL Trigger: CAACACTCCAGCAGCTGGCAAGAAGAAGCCTGCTAA...GCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000156324.3 |
||
| CDS-3UTR CAA 90 bp | TATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCAAGTCAGCTGTGTGAGGTaGGCAGTATGTTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YNSNESLETCPPFIRAQQVSCVR*AVCCSS Trigger: GCTGCTGCAACATACTGCCAACCTCACACAGCTGAC...TTGCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CAA 90 bp | AATATATCCATATACTCTAGAACAGTAAGGGGAGAGCCAAAAGGTGGATGCCATAGTCGGAGACAGTGCTaGCCTGTAAACTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NISIYSRTVRGEPKGGCHSRRQC*PVNSSF Trigger: GAAGCTGGAGTTTACAGGCAAGCACTGTCTCCGACT...ATGGCATCCACCTTTTGGCTCTCCCCTTACTGTTCTAGAGTATATGGATATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091676.12 ENSMUST00000094520.5 |
||
| CDS-3UTR CAA 90 bp | GATAATAGCAGGCTACTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATGGCTGCCTTACACCCTaGAGTGTGTTCATAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DNSRLLDLPKKEIQLNSDGCLTP*SVFISS Trigger: TGAGCTTATGAACACACTCAAGGGTGTAAGGCAGCC...ATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAGTAGCCTGCTATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | AGACAGTGCTGGAATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGGGCTGCCTTACACCCTaGAGTGTGTTCATAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RQCWNAALQFSDTIAVKGGCLTP*SVFISS Trigger: TGAGCTTATGAACACACTCAAGGGTGTAAGGCAGCC...CCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCATTCCAGCACTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | TATAACTCTAATGAATCTCTTGAGACCTGCCCTCCATTTATCAGAGCCCAGCAAGGCTGCCTTACACCCTaGAGTGTGTTCATAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: YNSNESLETCPPFIRAQQGCLTP*SVFISS Trigger: TGAGCTTATGAACACACTCAAGGGTGTAAGGCAGCC...TTGCTGGGCTCTGATAAATGGAGGGCAGGTCTCAAGAGATTCATTAGAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | ACTGTAGACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTAGTCAGCTGTGTGAGGTaGGCAGTATGTTGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TVDIRLKIRSWFSISTQLVSCVR*AVCCSS Trigger: GCTGCTGCAACATACTGCCAACCTCACACAGCTGAC...TAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTCTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS GCA 90 bp | ATATCCCAGTGTATGGACTTTATTGTCAATTCCTGGATTGAGGAGTaGTTGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGTATCACA | + |
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Preference number: 5 (lower is better) Translates to: ISQCMDFIVNSWIEE*LPVNSSFSKITCIT Trigger: TGTGATACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS TCA 90 bp | GTTATATATATCCCAGTGTATGGACTTTATTGTCAATTCCTGGATTaGGGAGTGCTTGCCTGTAAACTCCAGCTTCTCAAAGATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: VIYIPVYGLYCQFLD*GVLACKLQLLKDHL Trigger: CAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGATATATATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS CCA 90 bp | GCAAGGTTATATATATCCCAGTGTATGGACTTTATTGTCAATTCCTaGATTGAGGAGTGCTTGCCTGTAAACTCCAGCTTCTCAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: ARLYISQCMDFIVNS*IEECLPVNSSFSKI Trigger: GATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGATATATATAACCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCCTACAATTTTCAGATACAATTGCTGTTAAAGGGTGTGTCTGTACTGCTGACCATGGAAAATTaGTTCTCCACAAAATCGACT | + |
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Preference number: 5 (lower is better) Translates to: MQPYNFQIQLLLKGVSVLLTMEN*FSTKST Trigger: AGTCGATTTTGTGGAGAACAAATTTTCCATGGTCAG...CAGTACAGACACACCCTTTAACAGCAATTGTATCTGAAAATTGTAGGGCTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | CTGGACCTCCCCAAGAAAGAGATACAGCTTAATAGTGATAACAGTCTAATACAAAAGCTCAGAACAAAGTaGTACAAATCTGTCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LDLPKKEIQLNSDNSLIQKLRTK*YKSVWN Trigger: ATTCCAGACAGATTTGTACAACTTTGTTCTGAGCTT...TTGTATTAGACTGTTATCACTATTAAGCTGTATCTCTTTCTTGGGGAGGTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | GACATTAGGCTGAAAATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAAAGCTCAGAACAAAGTaGTACAAATCTGTCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DIRLKIRSWFSISTQLPQKLRTK*YKSVWN Trigger: ATTCCAGACAGATTTGTACAACTTTGTTCTGAGCTT...TTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATTTTCAGCCTAATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | AATAAGGTCATGGTTTTCCATCTCAACACAACTACCTCAAATCAGAAGAATTTGCTGACCATGGAAAATTaGTTCTCCACAAAATCGACT | + |
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Preference number: 5 (lower is better) Translates to: NKVMVFHLNTTTSNQKNLLTMEN*FSTKST Trigger: AGTCGATTTTGTGGAGAACAAATTTTCCATGGTCAG...CAAATTCTTCTGATTTGAGGTAGTTGTGTTGAGATGGAAAACCATGACCTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS-3UTR CAA 90 bp | CAGAGACCTCCTATTCAAGTCCATTATGATCTTTATAATGTCCTCACTCTTTATCTGACCATGGAAAATTaGTTCTCCACAAAATCGACT | + |
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Preference number: 5 (lower is better) Translates to: QRPPIQVHYDLYNVLTLYLTMEN*FSTKST Trigger: AGTCGATTTTGTGGAGAACAAATTTTCCATGGTCAG...ATAAAGAGTGAGGACATTATAAAGATCATAATGGACTTGAATAGGAGGTCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 |
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| CDS CAA 72 bp | GGGCCATGTTGCCACCATCAGGCTCAGGATCTTACGTaGTCTGCTGGTGAATGCATCCTTGAAGAGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPCCHHQAQDLT*SAGECILEEWW Trigger: CCACCACTCTTCAAGGATGCATTCACCAGCAGACAACGTAAGATCCTGAGCCTGATGGTGGCAACATGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000133626.8 |
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| CDS TCA 72 bp | TCAAGGCCATCTAGTACAGCTTTCAGGGTCTCCAGGTaGTCAATCCCACACAGAGCTCCCACAGGAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: SRPSSTAFRVSR*SIPHRAPTGRT Trigger: AGTCCTTCCTGTGGGAGCTCTGTGTGGGATTGATCACCTGGAGACCCTGAAAGCTGTACTAGATGGCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000133626.8 |
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| CDS GCA 72 bp | CTGGTGAATGCATCCTTGAAGAGTGGTGGGAAGAGTTaGACAGGCAGGTTCGGCAGAGCAGAGATAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVNASLKSGGKS*TGRFGRAEIVK Trigger: CTTGACTATCTCTGCTCTGCCGAACCTGCCTGTGCAACTCTTCCCACCACTCTTCAAGGATGCATTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000133626.8 ENSMUST00000156324.3 |
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| CDS GCA 72 bp | GCACTTGTAGGTTCCACCTGGTTGTCTGCTGGTGAATaGATCCTTGAAGAGTGGTGGGAAGAGTTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: ALVGSTWLSAGE*ILEEWWEELHR Trigger: CCTGTGCAACTCTTCCCACCACTCTTCAAGGATGCATTCACCAGCAGACAACCAGGTGGAACCTACAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| CDS CAA 72 bp | GCTGGTGAATGCATCCTTGAAGAGTGGTGGGAAGAGTaGCACAGGCAGGTTCGGCAGAGCAGAGATAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: AGECILEEWWEE*HRQVRQSRDSQ Trigger: TTGACTATCTCTGCTCTGCCGAACCTGCCTGTGCAACTCTTCCCACCACTCTTCAAGGATGCATTCACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084191.3 ENSMUST00000091676.12 ENSMUST00000094520.5 ENSMUST00000133626.8 ENSMUST00000156324.3 |
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| CDS CCA 72 bp | GGGCATCTCGCAAATCAAGCACTTGTAGGTTCCACCTaGTTGTCTGCTGGTGAATGCATCCTTGAAGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GHLANQALVGST*LSAGECILEEW Trigger: CCACTCTTCAAGGATGCATTCACCAGCAGACAACCAGGTGGAACCTACAAGTGCTTGATTTGCGAGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156324.3 |
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| CDS GCA 72 bp | AAGGCTTCATCTTTTAGCAGGCTTCTTCTTGCCAGCTaGTGGAGTGTTGGTGGGTCCTTGAAGCTCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: KASSFSRLLLAS*WSVGGSLKLIV Trigger: TACAATGAGCTTCAAGGACCCACCAACACTCCAGCAGCTGGCAAGAAGAAGCCTGCTAAAAGATGAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS CAA 90 bp | TCCCAGTGTATGGACTTTATTGTCAATTCCTGGATTGAGGAGTGCTaGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGTATCACATCT | + |
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Preference number: 6 (lower is better) Translates to: SQCMDFIVNSWIEEC*PVNSSFSKITCITS Trigger: AGATGTGATACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS TCA 72 bp | ATCCCAGTGTATGGACTTTATTGTCAATTCCTGGATTaGGGAGTGCTTGCCTGTAAACTCCAGCTTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: IPVYGLYCQFLD*GVLACKLQLLK Trigger: TTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCATACACTGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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| CDS CAA 72 bp | ATGGACTTTATTGTCAATTCCTGGATTGAGGAGTGCTaGCCTGTAAACTCCAGCTTCTCAAAGATCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: MDFIVNSWIEEC*PVNSSFSKITC Trigger: ACAGGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGGAATTGACAATAAAGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084191.3 |
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