Pregenerated sensors for PRAMEL37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072822Ensembl transcript IDs: ENSMUST00000094587.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATTGCCTaGAGTCAGTCTCTGAGCACCCCAGATGAGAGATGTGTCTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: PIIAHPFLSKYLYIA*SQSLSTPDERCVSR Trigger: TCTTGAGACACATCTCTCATCTGGGGTGCTCAGAGACTGACTTCAGGCAATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| 3UTR TCA 90 bp | ATCCTTTCCTTTCCAAGTATCTTTACATTGCCTGAAGTCAGTCTCTaGGCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTC | + |
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Preference number: 1 (lower is better) Translates to: ILSFPSIFTLPEVSL*APQMRDVSQDCHLF Trigger: GAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCTCAGAGACTGACTTCAGGCAATGTAAAGATACTTGGAAAGGAAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| 3UTR TCA 72 bp | TTACATTGCCTGAAGTCAGTCTCTGAGCACCCCAGATaGGAGATGTGTCTCAAGACTGTCATTTATTCACAT | + |
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Preference number: 3 (lower is better) Translates to: LHCLKSVSEHPR*EMCLKTVIYSH Trigger: ATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCTCAGAGACTGACTTCAGGCAATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | GCTCCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTGGTCTCCAGGTTAGGTaGCTTCATCAAAGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: APHVKLSLQDPNYCTSFPGLQVR*LHQSPH Trigger: GTGGGGGCTTTGATGAAGTCACCTAACCTGGAGACC...AGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | GCTCCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTGCTACCACCTTCAGCTaGCTCCTCCTTGCATATCTG | + |
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Preference number: 4 (lower is better) Translates to: APHVKLSLQDPNYCTSFPATTFS*LLLAYL Trigger: CAGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGC...AGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | CCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCGGGAAAAGTCCAGGCTaGCATGATTGCCTTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: PHVKLSLQDPNYCTSFPFGKSPG*HDCLHE Trigger: CTCATGAAGGCAATCATGGCAGCCTGGACTTTTCCC...GAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | GCTCCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTAAAGTCTGGCTCTCTTaGCATAGACACAGCACTCAC | + |
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Preference number: 4 (lower is better) Translates to: APHVKLSLQDPNYCTSFPKVWLS*HRHSTH Trigger: GTGAGTGCTGTGTCTATGGCAAGAGAGCCAGACTTT...AGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGATGTCCCAGAAGGCATaGTGCACATTCCTCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: STPDERCVSRLSFIHMQKMSQKA*CTFLRS Trigger: GGACCTGAGGAATGTGCACCATGCCTTCTGGGACAT...CTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | CATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAACAGCTGCCTCCTCCTTaGATATCTGCGAAGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: HVKLSLQDPNYCTSFPFQQLPPP*ISAKDL Trigger: AAGGTCCTTCGCAGATATGCAAGGAGGAGGCAGCTG...TTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCTGAATCCATGCCAGCAAAGGCCCTCTaGAACAGTGCTGGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RDVSQDCHLFTCRSSESMPAKAL*NSAGKS Trigger: GCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGG...CATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| 3UTR CAA 72 bp | TCCTGGCAGAGTCAATTCAAAACATCCAAGTTGCCTTaGTCAGTCCACAAGTCTGCTCCCCATGTCAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SWQSQFKTSKLP*SVHKSAPHVKL Trigger: AAGCTTGACATGGGGAGCAGACTTGTGGACTGACAAAGGCAACTTGGATGTTTTGAATTGACTCTGCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | CCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCTCAGATTCTGGAGAGTaGACAGAGTCTGAACACTCA | + |
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Preference number: 4 (lower is better) Translates to: PHVKLSLQDPNYCTSFPFSDSGE*TESEHS Trigger: TGAGTGTTCAGACTCTGTCCACTCTCCAGAATCTGA...GAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | GCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTAGTGGACACCTTGCATaGAGAGATGCTGGAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: APQMRDVSQDCHLFTCRSSGHLA*RDAGDN Trigger: ATTGTCTCCAGCATCTCTCCATGCAAGGTGTCCACT...ACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCCATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTCCTTCAGGATGGGCATaGAGAAGTCATTGTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: APHVKLSLQDPNYCTSFPPSGWA*RSHCCK Trigger: TTTACAACAATGACTTCTCCATGCCCATCCTGAAGG...AGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | CATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGCTGAGAGCATTGTATaGAGGAAGGTAGGAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HVKLSLQDPNYCTSFPFQAESIV*RKVGVH Trigger: ATGCACTCCTACCTTCCTTCATACAATGCTCTCAGC...TTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | CATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAATGGTCTGTGAGAAAGTaGACACCTTGCATGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HVKLSLQDPNYCTSFPFQWSVRK*TPCMER Trigger: TCTCTCCATGCAAGGTGTCCACTTTCTCACAGACCA...TTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | AGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCTGAATCCATGAAATTTGGTAGTGAGTaGTGGAGAGGGACCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RDVSQDCHLFTCRSSESMKFGSE*WRGTPR Trigger: CCTTGGGGTCCCTCTCCATCACTCACTACCAAATTT...CATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | AGCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGCCACTTCAAGAAGTATaGTTGTGTTTCATCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: STPDERCVSRLSFIHMQKPLQEV*LCFIMA Trigger: CGCCATGATGAAACACAAGCATACTTCTTGAAGTGG...CTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | AGCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTCGATGTGCTCTGGATaGAAGACATTCAAAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: STPDERCVSRLSFIHMQKSMCSG*KTFKIS Trigger: AGAGATTTTGAATGTCTTTCATCCAGAGCACATCGA...CTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | GCACCCCAGATGAGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCCTATTGGCAATCTTaGAGACATTCTTATAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: APQMRDVSQDCHLFTCRSSYWQS*RHSYRG Trigger: CCCTCTATAAGAATGTCTTCAAGATTGCCAATAGGA...ACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATTTCCAGTTGGCTGTGTaGTGTAAAAGGTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLQDPNYCTSFPFQVSLHFQLAV*CKRSFR Trigger: CCTGAAGGACCTTTTACAGCACACAGCCAACTGGAA...ATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCTGAATCCATGGAGTCCTTTCTCTGCTaGGCCCACTTCAAGAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: RDVSQDCHLFTCRSSESMESFLC*AHFKKY Trigger: ATACTTCTTGAAGTGGGCCCAGCAGAGAAAGGACTC...CATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCTGAATCCATGCAAAAGAGAGGCTCTTaGGCTGCCTTATTGCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RDVSQDCHLFTCRSSESMQKRGS*AALLPL Trigger: TAAGGGCAATAAGGCAGCCCAAGAGCCTCTCTTTTG...CATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | CATGTCAAGCTTAGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAAGCAAAAACAAAGTCTaGCTCTCTTGCCATAGACAC | + |
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Preference number: 4 (lower is better) Translates to: HVKLSLQDPNYCTSFPFQSKNKV*LSCHRH Trigger: GTGTCTATGGCAAGAGAGCCAGACTTTGTTTTTGCT...TTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR TCA 90 bp | AGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATGTATCCATGAGTTCCTaGCAAAGTTGGGCAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: SLQDPNYCTSFPFQVSLHVSMSS*QSWANL Trigger: AAGATTTGCCCAACTTTGTCAGGAACTCATGGATAC...ATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATCGAAGATTTCTCATCTaGCATAAGCAGGGAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SLQDPNYCTSFPFQVSLHRRFLI*HKQGAK Trigger: TTTTGCTCCCTGCTTATGGCAGATGAGAAATCTTCG...ATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATTGCATGGAGAGATGCTaGAGACAATTGAATTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLQDPNYCTSFPFQVSLHCMERC*RQLNLE Trigger: CTCCAAATTCAATTGTCTCCAGCATCTCTCCATGCA...ATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGAGATGTGTCTCAAGACTGTCATTTATTCACATGCAGAAGTTCTGAATCCATGTCATCTTGTTCCAGTTaGCTGTGTGCTGTAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RDVSQDCHLFTCRSSESMSSCSS*LCAVKG Trigger: ACCTTTTACAGCACACAGCCAACTGGAACAAGATGA...CATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS-3UTR CCA 90 bp | AGCCTCCAAGATCCCAATTATTGCACATCCTTTCCTTTCCAAGTATCTTTACATTTCCTCGATGTGCTCTaGATGAAAGACATTCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SLQDPNYCTSFPFQVSLHFLDVL*MKDIQN Trigger: ATTTTGAATGTCTTTCATCCAGAGCACATCGAGGAA...ATGTAAAGATACTTGGAAAGGAAAGGATGTGCAATAATTGGGATCTTGGAGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 90 bp | GAAGTATGCTTGTGTTTCATCATGGCGGGGCCTGAGGCACAGGTCTaGTACCACCTTCAGCTGCCTCCTCCTTGCATATCTGCGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: EVCLCFIMAGPEAQV*YHLQLPPPCISAKD Trigger: GTCCTTCGCAGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGCAGACCTGTGCCTCAGGCCCCGCCATGATGAAACACAAGCATACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 90 bp | CTTCATGAGCTTCTTAAGTCTGCCAGCAAAGGCCCTCTGGAACAGTaGTGGGAAGAGCAGAAAAGGCACCTCCTCCAGACAGGACAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LHELLKSASKGPLEQ*WEEQKRHLLQTGQG Trigger: GCCTTGTCCTGTCTGGAGGAGGTGCCTTTTCTGCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAGCTCATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 90 bp | CAAAGCCCCCACAGGGAGACAGGGAAAAGTCCAGGCTGCCATGATTaGCTTCATGAGCTTCTTAAGTCTGCCAGCAAAGGCCCTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSPHRETGKSPGCHD*LHELLKSASKGPLE Trigger: TTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAGCTCATGAAGGCAATCATGGCAGCCTGGACTTTTCCCTGTCTCCCTGTGGGGGCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS CCA 90 bp | CATGAGCTTCTTAAGTCTGCCAGCAAAGGCCCTCTGGAACAGTGCTaGGAAGAGCAGAAAAGGCACCTCCTCCAGACAGGACAAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: HELLKSASKGPLEQC*EEQKRHLLQTGQGQ Trigger: TTGGCCTTGTCCTGTCTGGAGGAGGTGCCTTTTCTGCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAGCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS CCA 90 bp | ATGATTGCCTTCATGAGCTTCTTAAGTCTGCCAGCAAAGGCCCTCTaGAACAGTGCTGGGAAGAGCAGAAAAGGCACCTCCTCCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: MIAFMSFLSLPAKAL*NSAGKSRKGTSSRQ Trigger: CTGTCTGGAGGAGGTGCCTTTTCTGCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAGCTCATGAAGGCAATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS CCA 90 bp | ACTCCAGAGAGGCAGGGTACTGTTCCACATTCATCTTGTTCCAGTTaGCTGTGTGCTGTAAAAGGTCCTTCAGGATGGGCATGGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TPERQGTVPHSSCSS*LCAVKGPSGWAWRS Trigger: ACTTCTCCATGCCCATCCTGAAGGACCTTTTACAGCACACAGCCAACTGGAACAAGATGAATGTGGAACAGTACCCTGCCTCTCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 90 bp | GAGGCAGGGTACTGTTCCACATTCATCTTGTTCCAGTTGGCTGTGTaGTGTAAAAGGTCCTTCAGGATGGGCATGGAGAAGTCATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: EAGYCSTFILFQLAV*CKRSFRMGMEKSLL Trigger: CAACAATGACTTCTCCATGCCCATCCTGAAGGACCTTTTACAGCACACAGCCAACTGGAACAAGATGAATGTGGAACAGTACCCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | CGGGGCCTGAGGCACAGGTCTGCTACCACCTTCAGCTaGCTCCTCCTTGCATATCTGCGAAGGACCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: RGLRHRSATTFS*LLLAYLRRTFT Trigger: AGTGAAGGTCCTTCGCAGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGCAGACCTGTGCCTCAGGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | TTGTGTTTCATCATGGCGGGGCCTGAGGCACAGGTCTaGTACCACCTTCAGCTGCCTCCTCCTTGCATATCT | + |
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Preference number: 6 (lower is better) Translates to: LCFIMAGPEAQV*YHLQLPPPCIS Trigger: AGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGCAGACCTGTGCCTCAGGCCCCGCCATGATGAAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS TCA 72 bp | AGGGACCCCAAGGGTGTCATCAAGCACCTGAAGACCTaGCTCATGTGGTCTGTGAGAAAGTGGACACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RDPKGVIKHLKT*LMWSVRKWTPC Trigger: GCAAGGTGTCCACTTTCTCACAGACCACATGAGTCAGGTCTTCAGGTGCTTGATGACACCCTTGGGGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | CTTCTTAAGTCTGCCAGCAAAGGCCCTCTGGAACAGTaGTGGGAAGAGCAGAAAAGGCACCTCCTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: LLKSASKGPLEQ*WEEQKRHLLQT Trigger: TGTCTGGAGGAGGTGCCTTTTCTGCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | GCACAGGTCTGCTACCACCTTCAGCTGCCTCCTCCTTaGATATCTGCGAAGGACCTTCACTACTGTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: AQVCYHLQLPPP*ISAKDLHYCRL Trigger: AAGCCTACAGTAGTGAAGGTCCTTCGCAGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGCAGACCTGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | CACAGGGAGACAGGGAAAAGTCCAGGCTGCCATGATTaGCTTCATGAGCTTCTTAAGTCTGCCAGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRETGKSPGCHD*LHELLKSASKG Trigger: GCCTTTGCTGGCAGACTTAAGAAGCTCATGAAGGCAATCATGGCAGCCTGGACTTTTCCCTGTCTCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS TCA 72 bp | GACCTTCACTACTGTAGGCTTCTCATCCAAGGGCTCTaGAGAACAGCTACCATCCTCTGCACCAGCCCATAT | + |
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Preference number: 6 (lower is better) Translates to: DLHYCRLLIQGL*RTATILCTSPY Trigger: ATATGGGCTGGTGCAGAGGATGGTAGCTGTTCTTCAGAGCCCTTGGATGAGAAGCCTACAGTAGTGAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS TCA 72 bp | AGGAATCCAAGTCTGACTGTGAAATTTGGTAGTGAGTaGTGGAGAGGGACCCCAAGGGTGTCATCAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: RNPSLTVKFGSE*WRGTPRVSSST Trigger: GGTGCTTGATGACACCCTTGGGGTCCCTCTCCATCACTCACTACCAAATTTCACAGTCAGACTTGGATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS CAA 72 bp | CACTCCAGAGAGGCAGGGTACTGTTCCACATTCATCTaGTTCCAGTTGGCTGTGTGCTGTAAAAGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HSREAGYCSTFI*FQLAVCCKRSF Trigger: GAAGGACCTTTTACAGCACACAGCCAACTGGAACAAGATGAATGTGGAACAGTACCCTGCCTCTCTGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS CAA 72 bp | CTCATCTGCCATAAGCAGGGAGCAAAACGGGCCAGATaGAACACATTCCACTCAGTGTTCAGTTCGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: LICHKQGAKRAR*NTFHSVFSSNS Trigger: GGAATTCGAACTGAACACTGAGTGGAATGTGTTCAATCTGGCCCGTTTTGCTCCCTGCTTATGGCAGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS TCA 72 bp | GAGCATTGTATGAAGGAAGGTAGGAGTGCATTGAGCTaGGAGTCCTTCAGCTTACATCCCTGCAAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EHCMKEGRSALS*ESFSLHPCKFR Trigger: TCTGAATTTGCAGGGATGTAAGCTGAAGGACTCTCAGCTCAATGCACTCCTACCTTCCTTCATACAATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | CCTATTGGCAATCTTGAAGACATTCTTATAGAGGGGTaGCAGGAGAAGTTTGCGAAGATTTCTCATCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PIGNLEDILIEG*QEKFAKISHLP Trigger: TGGCAGATGAGAAATCTTCGCAAACTTCTCCTGGCACCCCTCTATAAGAATGTCTTCAAGATTGCCAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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| CDS GCA 72 bp | ATGTTTATACAGCACAAATGTAGGGAGTCCTTTCTCTaGTGGGCCCACTTCAAGAAGTATGCTTGTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: MFIQHKCRESFL*WAHFKKYACVS Trigger: TGAAACACAAGCATACTTCTTGAAGTGGGCCCAGCAGAGAAAGGACTCCCTACATTTGTGCTGTATAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094587.3 |
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