RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRAMEL35 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000107392

Ensembl transcript IDs: ENSMUST00000201555.2

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTCATTAAGGCATGACCAAAAGTTCAGGAGTTCAAAGCTAGAATaGAAAGCCTGTTTTTCTTTGCTTTATGTTGTCTTCTTACCTTTA +
Preference number: 1 (lower is better)
Translates to: SSLRHDQKFRSSKLE*KACFSLLYVVFLPL
Trigger: TAAAGGTAAGAAGACAACATAAAGCAAAGAAAAACAGGCTTTCCATTCTAGCTTTGAACTCCTGAACTTTTGGTCATGCCTTAATGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
3UTR-3UTR GCA 90 bp TTCATAGAGTTTGGGACTCCAAGGGAATTGAGCTCTAGAGACATGTGGCATAAATTTCTGACTCCATCATaGCCCTGGTCCAACAGTCTA +
Preference number: 2 (lower is better)
Translates to: FIEFGTPRELSSRDMWHKFLTPS*PWSNSL
Trigger: TAGACTGTTGGACCAGGGGCATGATGGAGTCAGAAA...TTTATGCCACATGTCTCTAGAGCTCAATTCCCTTGGAGTCCCAAACTCTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
3UTR-3UTR GCA 90 bp CTTTATGTTGTCTTCTTACCTTTAGGCATCTTTGATGGGTCCAAGGTGCCTTGTGAAGCCACATATAAATaGCAAACTGTTTTTCTGACT +
Preference number: 2 (lower is better)
Translates to: LYVVFLPLGIFDGSKVPCEATYK*QTVFLT
Trigger: AGTCAGAAAAACAGTTTGGCATTTATATGTGGCTTC...ACAAGGCACCTTGGACCCATCAAAGATGCCTAAAGGTAAGAAGACAACATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
3UTR TCA 72 bp TTTGCTTTATGTTGTCTTCTTACCTTTAGGCATCTTTaGTGGGTCCAAGGTGCCTTGTGGTCTCAACATACT +
Preference number: 3 (lower is better)
Translates to: FALCCLLTFRHL*WVQGALWSQHT
Trigger: AGTATGTTGAGACCACAAGGCACCTTGGACCCATCAAAGATGCCTAAAGGTAAGAAGACAACATAAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
3UTR CCA 72 bp TTGATGGGTCCAAGGTGCCTTGTGGTCTCAACATACTaGATATTAACCATCTGTGATCATTTTAATCCCTCT +
Preference number: 3 (lower is better)
Translates to: LMGPRCLVVSTY*ILTICDHFNPS
Trigger: AGAGGGATTAAAATGATCACAGATGGTTAATATCCAGTATGTTGAGACCACAAGGCACCTTGGACCCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp CATTCAGGGTCCCAGTCACTACCCATCTCTTTACTTCTAACCATATGGGAAGTGCCACCATTGTCTTTATaGGCGAGTTGTGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HSGSQSLPISLLLTIWEVPPLSL*ASCVCQ
Trigger: CTGGCAGACACAACTCGCTCATAAAGACAATGGTGG...CACTTCCCATATGGTTAGAAGTAAAGAGATGGGTAGTGACTGGGACCCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp CATTCAGGGTCCCAGTCACTACCCATCTCTTTACTTCTAACCATATGGGAAGTGAAATTAGGCAGTGAGTaGTGGAGAGGGTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HSGSQSLPISLLLTIWEVKLGSE*WRGSAR
Trigger: CCTTGCAGACCCTCTCCATCACTCACTGCCTAATTT...CACTTCCCATATGGTTAGAAGTAAAGAGATGGGTAGTGACTGGGACCCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR CCA 90 bp CTTTATGTTGTCTTCTTACCTTTAGGCATCTTTGATGGGTCCAAGGTGCCTTGTTCCCCAGAGGGGATATaGCCAAAGCCTCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LYVVFLPLGIFDGSKVPCSPEGI*PKPHLS
Trigger: TGAGAGATGAGGCTTTGGCCATATCCCCTCTGGGGA...ACAAGGCACCTTGGACCCATCAAAGATGCCTAAAGGTAAGAAGACAACATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp TCCACATTTCAATCTAAGCATTCAGGGTCCCAGTCACTACCCATCTCTTTACTTTGTGAAATTAGGCAGTaGGTGATGGAGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: STFQSKHSGSQSLPISLLCEIRQ*VMERVC
Trigger: GCAGACCCTCTCCATCACTCACTGCCTAATTTCACA...AAGTAAAGAGATGGGTAGTGACTGGGACCCTGAATGCTTAGATTGAAATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR CCA 90 bp CATTCAGGGTCCCAGTCACTACCCATCTCTTTACTTCTAACCATATGGGAAGTGATGTTCCAGAAGCCATaGTGCACATTTCTCATGTCG +
Preference number: 4 (lower is better)
Translates to: HSGSQSLPISLLLTIWEVMFQKP*CTFLMS
Trigger: CGACATGAGAAATGTGCACCATGGCTTCTGGAACAT...CACTTCCCATATGGTTAGAAGTAAAGAGATGGGTAGTGACTGGGACCCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp TTCATAGAGTTTGGGACTCCAAGGGAATTGAGCTCTAGAGACATGTGGCATAAAAATGGACACGTTTCATaGAGACATGTTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: FIEFGTPRELSSRDMWHKNGHVS*RHVGDS
Trigger: ACTGTCTCCAACATGTCTTCATGAAACGTGTCCATT...TTTATGCCACATGTCTCTAGAGCTCAATTCCCTTGGAGTCCCAAACTCTATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp CTTCATAAAACAACAGTGTCTTTCCAAACCTGGACCTATTCTATCATCCTGACAGTATCCATGAGCTCCTaGCAAAGTTCCACAAATCTT +
Preference number: 4 (lower is better)
Translates to: LHKTTVSFQTWTYSIILTVSMSS*QSSTNL
Trigger: AAGATTTGTGGAACTTTGTCAGGAGCTCATGGATAC...TGTCAGGATGATAGAATAGGTCCAGGTTTGGAAAGACACTGTTGTTTTATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR CCA 90 bp ACATTTCAATCTAAGCATTCAGGGTCCCAGTCACTACCCATCTCTTTACTTCTAATGCATATTTATCAATaGCCCCACAGGGAGATATTG +
Preference number: 4 (lower is better)
Translates to: TFQSKHSGSQSLPISLLLMHIYQ*PHREIL
Trigger: CAATATCTCCCTGTGGGGCCATTGATAAATATGCAT...TAGAAGTAAAGAGATGGGTAGTGACTGGGACCCTGAATGCTTAGATTGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp AGAGATGTGTCCCAAGCATGTCATTTATTCATAGTCAGAAGTCCTGTATCCATGTTTTCTTCATTGAGCTaGGAACTGATTGACAGATCA +
Preference number: 4 (lower is better)
Translates to: RDVSQACHLFIVRSPVSMFSSLS*ELIDRS
Trigger: TGATCTGTCAATCAGTTCTCAGCTCAATGAAGAAAA...CATGGATACAGGACTTCTGACTATGAATAAATGACATGCTTGGGACACATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp CTTTGCTTCCTTCATAAAACAACAGTGTCTTTCCAAACCTGGACCTATTCTATCGATACACTTGACTTTTaGGGCCCCTGTTATATTCAT +
Preference number: 4 (lower is better)
Translates to: LCFLHKTTVSFQTWTYSIDTLDF*GPCYIH
Trigger: ATGAATATAACAGGGGCCTCAAAAGTCAAGTGTATC...GATAGAATAGGTCCAGGTTTGGAAAGACACTGTTGTTTTATGAAGGAAGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp TTGAAAGTAAATACTTTATGTAGCAAAGGTACCTGCATAATAGTGGGCACCTTTAACTTAAAAAGGTTGTaGCAGCAGGAAAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LKVNTLCSKGTCIIVGTFNLKRL*QQEKES
Trigger: GGATTCCTTTTCCTGCTGTCACAACCTTTTTAAGTT...AAAGGTGCCCACTATTATGCAGGTACCTTTGCTACATAAAGTATTTACTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS-3UTR TCA 90 bp TTGAAAGTAAATACTTTATGTAGCAAAGGTACCTGCATAATAGTGGGCACCTTTTTCATGCTACACCACTaGAAATCCAGAGACTTAAGA +
Preference number: 4 (lower is better)
Translates to: LKVNTLCSKGTCIIVGTFFMLHH*KSRDLR
Trigger: TCTTAAGTCTCTGGATTTTCAGTGGTGTAGCATGAA...AAAGGTGCCCACTATTATGCAGGTACCTTTGCTACATAAAGTATTTACTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CCA 90 bp TATGAGCGAGTTGTGTCTGCCAGCAAAGGCCTCTTGGAACAGCCATaGGACGTACACAGCTGGCACGTTCCCCAGAGGGGATATGGCCAA +
Preference number: 5 (lower is better)
Translates to: YERVVSASKGLLEQP*DVHSWHVPQRGYGQ
Trigger: TTGGCCATATCCCCTCTGGGGAACGTGCCAGCTGTGTACGTCCCATGGCTGTTCCAAGAGGCCTTTGCTGGCAGACACAACTCGCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CCA 90 bp ACCATTGTCTTTATGAGCGAGTTGTGTCTGCCAGCAAAGGCCTCTTaGAACAGCCATGGGACGTACACAGCTGGCACGTTCCCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TIVFMSELCLPAKAS*NSHGTYTAGTFPRG
Trigger: CCCTCTGGGGAACGTGCCAGCTGTGTACGTCCCATGGCTGTTCCAAGAGGCCTTTGCTGGCAGACACAACTCGCTCATAAAGACAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp CCACAGGGAGATATTGGAAAGGCCAGGCTGCCACCATTGTCTTTATaGGCGAGTTGTGTCTGCCAGCAAAGGCCTCTTGGAACAGCCATG +
Preference number: 5 (lower is better)
Translates to: PQGDIGKARLPPLSL*ASCVCQQRPLGTAM
Trigger: CATGGCTGTTCCAAGAGGCCTTTGCTGGCAGACACAACTCGCTCATAAAGACAATGGTGGCAGCCTGGCCTTTCCAATATCTCCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp AGCAGGAAAAGGAATCCAAGTCTGTCTGTGAAATTAGGCAGTGAGTaGTGGAGAGGGTCTGCAAGGGCGTCCTCAGGCACCCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: SRKRNPSLSVKLGSE*WRGSARASSGTLGS
Trigger: AGATCCTAGGGTGCCTGAGGACGCCCTTGCAGACCCTCTCCATCACTCACTGCCTAATTTCACAGACAGACTTGGATTCCTTTTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp GCAGGTAAGAGGACAATGAGCTGGGAGTCCTTCATGCTACACCACTaGAAATCCAGAGACTTAAGAGTACCTGCCAGTTTTCCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: AGKRTMSWESFMLHH*KSRDLRVPASFPRR
Trigger: TCTCCTAGGAAAACTGGCAGGTACTCTTAAGTCTCTGGATTTTCAGTGGTGTAGCATGAAGGACTCCCAGCTCATTGTCCTCTTACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp CTCTGCTTGGCCCAATTCAAGAAATATGCTTTTTCTTCATTGAGCTaGGAACTGATTGACAGATCAACTATGATCTTCAGACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LCLAQFKKYAFSSLS*ELIDRSTMIFRRCL
Trigger: GAGGCAGCGTCTGAAGATCATAGTTGATCTGTCAATCAGTTCTCAGCTCAATGAAGAAAAAGCATATTTCTTGAATTGGGCCAAGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp CCAATTCAAGAAATATGCTTTTTCTTCATTGAGCTGAGAACTGATTaGCAGATCAACTATGATCTTCAGACGCTGCCTCAGTGCATATCT +
Preference number: 5 (lower is better)
Translates to: PIQEICFFFIELRTD*QINYDLQTLPQCIS
Trigger: AGATATGCACTGAGGCAGCGTCTGAAGATCATAGTTGATCTGTCAATCAGTTCTCAGCTCAATGAAGAAAAAGCATATTTCTTGAATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS TCA 90 bp AGAGTCCAGTCGGTATACAGTTCTAATTCTGTAATGTGCTCTGGATaGAAAACATTCATGATTTCTCTGATAACTTTGTCTGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: RVQSVYSSNSVMCSG*KTFMISLITLSGAS
Trigger: GGATGCACCAGACAAAGTTATCAGAGAAATCATGAATGTTTTTCATCCAGAGCACATTACAGAATTAGAACTGTATACCGACTGGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CCA 72 bp GGACGTACACAGCTGGCACGTTCCCCAGAGGGGATATaGCCAAAGCCTCATCTCTCAGCTGTGTCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GRTQLARSPEGI*PKPHLSAVSAL
Trigger: CAAGGCAGACACAGCTGAGAGATGAGGCTTTGGCCATATCCCCTCTGGGGAACGTGCCAGCTGTGTACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CCA 72 bp AAAGGCCTCTTGGAACAGCCATGGGACGTACACAGCTaGCACGTTCCCCAGAGGGGATATGGCCAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: KGLLEQPWDVHS*HVPQRGYGQSL
Trigger: GAGGCTTTGGCCATATCCCCTCTGGGGAACGTGCCAGCTGTGTACGTCCCATGGCTGTTCCAAGAGGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 90 bp CACCATTGTCTTTATGAGCGAGTTGTGTCTGCCAGCAAAGGCCTCTaGGAACAGCCATGGGACGTACACAGCTGGCACGTTCCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: HHCLYERVVSASKGL*EQPWDVHSWHVPQR
Trigger: CCTCTGGGGAACGTGCCAGCTGTGTACGTCCCATGGCTGTTCCAAGAGGCCTTTGCTGGCAGACACAACTCGCTCATAAAGACAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp CAATGGCCCCACAGGGAGATATTGGAAAGGCCAGGCTaGCACCATTGTCTTTATGAGCGAGTTGTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: QWPHREILERPG*HHCLYERVVSA
Trigger: GGCAGACACAACTCGCTCATAAAGACAATGGTGGCAGCCTGGCCTTTCCAATATCTCCCTGTGGGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 90 bp GGAGACATGACCCAATGCATCATAGCACTCCAGAGGGACAGGGTATaGTTCCACATTCATCTTGCTCCAGGTGGCTGTGTGCTGCAAAAG +
Preference number: 6 (lower is better)
Translates to: GDMTQCIIALQRDRV*FHIHLAPGGCVLQK
Trigger: CTTTTGCAGCACACAGCCACCTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAGTGCTATGATGCATTGGGTCATGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp TGTTCCACATTCATCTTGCTCCAGGTGGCTGTGTGCTaGAAAAGGTCCTTCAGGATGGCCATGGAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: CSTFILLQVAVC*KRSFRMAMEKS
Trigger: TGACTTCTCCATGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCACCTGGAGCAAGATGAATGTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp TGCCTCAGTGCATATCTGGGAAGGGCCTTCACTACTTaGTTTTCATCCAAGGTCTCTGCATCAGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: CLSAYLGRAFTT*FSSKVSASESL
Trigger: CAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCTTCCCAGATATGCACTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp TATTGTTCCACATTCATCTTGCTCCAGGTGGCTGTGTaGTGCAAAAGGTCCTTCAGGATGGCCATGGAGAAG +
Preference number: 6 (lower is better)
Translates to: YCSTFILLQVAV*CKRSFRMAMEK
Trigger: CTTCTCCATGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCACCTGGAGCAAGATGAATGTGGAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 90 bp GGTTTCCAGGTTATGCATATTTATCAATGGCCCCACAGGGAGATATaGGAAAGGCCAGGCTGCCACCATTGTCTTTATGAGCGAGTTGTG +
Preference number: 6 (lower is better)
Translates to: GFQVMHIYQWPHREI*ERPGCHHCLYERVV
Trigger: CACAACTCGCTCATAAAGACAATGGTGGCAGCCTGGCCTTTCCAATATCTCCCTGTGGGGCCATTGATAAATATGCATAACCTGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp AAGGGCCTTCACTACTTGCTTTTCATCCAAGGTCTCTaGATCAGAGTCACTGTCATTTGCATCGCTCCCTAT +
Preference number: 6 (lower is better)
Translates to: KGLHYLLFIQGL*IRVTVICIAPY
Trigger: ATAGGGAGCGATGCAAATGACAGTGACTCTGATGCAGAGACCTTGGATGAAAAGCAAGTAGTGAAGGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp AAGATTTTTCATCTGCCCAAAGTAGGGAGCAAAATGTaGCAGCCGCAACAGAGTCCAGTCGGTATACAGTTC +
Preference number: 6 (lower is better)
Translates to: KIFHLPKVGSKM*QPQQSPVGIQF
Trigger: GAACTGTATACCGACTGGACTCTGTTGCGGCTGGCACATTTTGCTCCCTACTTTGGGCAGATGAAAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 72 bp TGCCCCCTGGCCATAGACACAGGTCTTGCCACAATTTaGGCAGACATTTGTTGCAAAAGATATGCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: CPLAIDTGLATI*ADICCKRYALR
Trigger: CCTAAGAGCATATCTTTTGCAACAAATGTCTGCCAAAATTGTGGCAAGACCTGTGTCTATGGCCAGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 90 bp ACAAAGCCTTGCCCCCTGGCCATAGACACAGGTCTTGCCACAATTTaGGCAGACATTTGTTGCAAAAGATATGCTCTTAGGCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: TKPCPLAIDTGLATI*ADICCKRYALRLSF
Trigger: AAAAGAGAGCCTAAGAGCATATCTTTTGCAACAAATGTCTGCCAAAATTGTGGCAAGACCTGTGTCTATGGCCAGGGGGCAAGGCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS GCA 72 bp AAGTTCCACAAATCTTTCTCTGGAGACATGACCCAATaGATCATAGCACTCCAGAGGGACAGGGTATTGTTC +
Preference number: 6 (lower is better)
Translates to: KFHKSFSGDMTQ*IIALQRDRVLF
Trigger: GAACAATACCCTGTCCCTCTGGAGTGCTATGATGCATTGGGTCATGTCTCCAGAGAAAGATTTGTGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2
CDS CAA 72 bp GTTATGCATATTTATCAATGGCCCCACAGGGAGATATaGGAAAGGCCAGGCTGCCACCATTGTCTTTATGAG +
Preference number: 6 (lower is better)
Translates to: VMHIYQWPHREI*ERPGCHHCLYE
Trigger: CTCATAAAGACAATGGTGGCAGCCTGGCCTTTCCAATATCTCCCTGTGGGGCCATTGATAAATATGCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201555.2