Pregenerated sensors for PRAMEL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067360Ensembl transcript IDs: ENSMUST00000113176.3, ENSMUST00000118821.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCTGATGGCTGTGTGGGGACTCAGGCTTCTCTGTCTGCTCCCTaGCCTCATGAGTTGAAAGGAACTCCCTCTGTCAAAACTCCTAAT | + |
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Preference number: 1 (lower is better) Translates to: TPDGCVGTQASLSAP*PHELKGTPSVKTPN Trigger: ATTAGGAGTTTTGACAGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGTCCCCACACAGCCATCAGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR TCA 90 bp | TATGTCAGGGTAGTTCAAGGATGCAAATCAATGAAATTGCACTCCTaGTGGCTGTGTGGGGACTCAGGCTTCTCTGTCTGCTCCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: YVRVVQGCKSMKLHS*WLCGDSGFSVCSLA Trigger: GGCCAGGGAGCAGACAGAGAAGCCTGAGTCCCCACACAGCCATCAGGAGTGCAATTTCATTGATTTGCATCCTTGAACTACCCTGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR GCA 90 bp | TTTTGCAGGAGGCCAGATGGTAGATATCAAACAGATGTGAGAGCATaGCTCCAAGATGGCGATGTTGAATCCCTGAATCCTGCTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FCRRPDGRYQTDVRA*LQDGDVESLNPAEE Trigger: CTCCTCAGCAGGATTCAGGGATTCAACATCGCCATCTTGGAGGCATGCTCTCACATCTGTTTGATATCTACCATCTGGCCTCCTGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR TCA 90 bp | TTGTGGCTGGACTCCTGTCTTTCCAAGTTCATATTGGTCTCAAGCTaGTGGTTCCAATGCAGGCAGTTGAAATCTTTGAGCAGGATAGTT | + |
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Preference number: 1 (lower is better) Translates to: LWLDSCLSKFILVSS*WFQCRQLKSLSRIV Trigger: AACTATCCTGCTCAAAGATTTCAACTGCCTGCATTGGAACCATCAGCTTGAGACCAATATGAACTTGGAAAGACAGGAGTCCAGCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 90 bp | CATCATAAAGTCCGTTTTGCATGGAAGAGAATATGTACTAAGAGCTaGGAAGATGAAGCTTGGGGGTCTAAGTGTGTACAACACCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: HHKVRFAWKRICTKS*EDEAWGSKCVQHLS Trigger: AGAAAGGTGTTGTACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTTCCATGCAAAACGGACTTTATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 90 bp | TTTGCATGGAAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTaGGGGTCTAAGTGTGTACAACACCTTTCTAGTTGCTTTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: FAWKRICTKSWEDEA*GSKCVQHLSSCFNN Trigger: GTTGTTAAAGCAACTAGAAAGGTGTTGTACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTTCCATGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CAA 90 bp | TGTGTGGGGACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTaGAAAGGAACTCCCTCTGTCAAAACTCCTAATCATATTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: CVGTQASLSAPWPHE*KGTPSVKTPNHILS Trigger: AGACAGAATATGATTAGGAGTTTTGACAGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGTCCCCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTAATCATATTCTGTCTTaGCAAGGTCCCAAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TQASLSAPWPHELKGTPSNHILS*QGPKEW Trigger: CCACTCTTTGGGACCTTGCCAAGACAGAATATGATT...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTGCCTCCAAATTCACATaGAGGAAAAGTTATATTGTC | + |
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Preference number: 2 (lower is better) Translates to: TQASLSAPWPHELKGTPSASKFT*RKSYIV Trigger: GACAATATAACTTTTCCTGCATGTGAATTTGGAGGC...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR GCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGTCTTCAATTGCCACCTaGCTCCAAATTCACATGCAG | + |
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Preference number: 2 (lower is better) Translates to: NHILSWQGPKEWSPTTLVSSIAT*LQIHMQ Trigger: CTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGA...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACAGATGTGAGAGCATaGCTCCAAGATGGCGATGTT | + |
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Preference number: 2 (lower is better) Translates to: KTPNHILSWQGPKEWSPTTDVRA*LQDGDV Trigger: AACATCGCCATCTTGGAGGCATGCTCTCACATCTGT...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTACAGGCAAATCTCAGTaGGGACAGGGTGTTGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVTGKSQ*GQGVVS Trigger: ACTAACAACACCCTGTCCTCACTGAGATTTGCCTGT...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR TCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGGGGAACATATCAAGTTaGAACTGTGTTGGACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: NHILSWQGPKEWSPTTLVGNISS*NCVGLC Trigger: ACAAAGTCCAACACAGTTTCAACTTGATATGTTCCC...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR GCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCTCTTCAATTGCCACCTaGCTCCAAATTCACATGCAG | + |
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Preference number: 2 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGSSIAT*LQIHMQ Trigger: CTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGA...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATATGTACTAAGAGCTaGGAAGATGAAGCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGICTKS*EDEAWG Trigger: CCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATAT...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAGGGAACATATCAAGTTaGAACTGTGTTGGACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: KTPNHILSWQGPKEWSPTGNISS*NCVGLC Trigger: ACAAAGTCCAACACAGTTTCAACTTGATATGTTCCC...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATTTTGACAGGCAAATCTCAGTaGGGACAGGGTGTTGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: KTKKQSSLPYQSTIPGILTGKSQ*GQGVVS Trigger: ACTAACAACACCCTGTCCTCACTGAGATTTGCCTGT...CAAAATGCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATTTTGGATATCAAACAGATGTaGGAGCATGCCTCCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KTKKQSSLPYQSTIPGILDIKQM*EHASKM Trigger: CATCTTGGAGGCATGCTCTCACATCTGTTTGATATC...CAAAATGCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCAAAGTCCGTTTTGCATaGAAGAGAATATGTACTAAG | + |
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Preference number: 2 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGKVRFA*KRICTK Trigger: CTTAGTACATATTCTCTTCCATGCAAAACGGACTTT...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 72 bp | GGCTGTGTGGGGACTCAGGCTTCTCTGTCTGCTCCCTaGCCTCATGAGTTGAAAGGAACTCCCTCTGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: GCVGTQASLSAP*PHELKGTPSVK Trigger: TTTGACAGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGTCCCCACACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 72 bp | ATGCAAATCAATGAAATTGCACTCCTGATGGCTGTGTaGGGACTCAGGCTTCTCTGTCTGCTCCCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: MQINEIALLMAV*GLRLLCLLPGL Trigger: GAGGCCAGGGAGCAGACAGAGAAGCCTGAGTCCCCACACAGCCATCAGGAGTGCAATTTCATTGATTTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR TCA 72 bp | TTTGCAGGAGGCCAGATGGTAGATATCAAACAGATGTaGGAGCATGCCTCCAAGATGGCGATGTTGAATCCC | + |
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Preference number: 3 (lower is better) Translates to: FAGGQMVDIKQM*EHASKMAMLNP Trigger: GGGATTCAACATCGCCATCTTGGAGGCATGCTCTCACATCTGTTTGATATCTACCATCTGGCCTCCTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR TCA 72 bp | CTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTaGAAGGAACTCCCTCTGTCAAAACTCCTAATCATA | + |
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Preference number: 3 (lower is better) Translates to: LRLLCLLPGLMS*KELPLSKLLII Trigger: TATGATTAGGAGTTTTGACAGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTTGGGAACATATCAAGTaGAAACTGTGTTGGACTTTG | + |
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Preference number: 3 (lower is better) Translates to: TQASLSAPWPHELKGTPSWEHIK*KLCWTL Trigger: CAAAGTCCAACACAGTTTCAACTTGATATGTTCCCA...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR GCA 72 bp | AGGCCAGATGGTAGATATCAAACAGATGTGAGAGCATaGCTCCAAGATGGCGATGTTGAATCCCTGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: RPDGRYQTDVRA*LQDGDVESLNP Trigger: AGGATTCAGGGATTCAACATCGCCATCTTGGAGGCATGCTCTCACATCTGTTTGATATCTACCATCTGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR TCA 72 bp | GACTCCTGTCTTTCCAAGTTCATATTGGTCTCAAGCTaGTGGTTCCAATGCAGGCAGTTGAAATCTTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: DSCLSKFILVSS*WFQCRQLKSLS Trigger: GCTCAAAGATTTCAACTGCCTGCATTGGAACCATCAGCTTGAGACCAATATGAACTTGGAAAGACAGGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 72 bp | GTCCGTTTTGCATGGAAGAGAATATGTACTAAGAGCTaGGAAGATGAAGCTTGGGGGTCTAAGTGTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: VRFAWKRICTKS*EDEAWGSKCVQ Trigger: TTGTACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTTCCATGCAAAACGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 72 bp | ACTCCCTCTGTCAAAACTCCTAATCATATTCTGTCTTaGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: TPSVKTPNHILS*QGPKEWSPTTL Trigger: TAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTTGACAGAGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTTGGGAACATATCAAGTaGAAACTGTGTTGGACTTTG | + |
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Preference number: 3 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVWEHIK*KLCWTL Trigger: CAAAGTCCAACACAGTTTCAACTTGATATGTTCCCA...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR GCA 72 bp | AATACAACGTATGCAATAAAAAGTGTTGTCTTCAATTaGCACCTGCCTCCAAATTCACATGCAGGAAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: NTTYAIKSVVFN*HLPPNSHAGKV Trigger: AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CCA 72 bp | AAAAATTTCAAAAGGAATAATAGTCGTTGTTGTGGCTaGACTCCTGTCTTTCCAAGTTCATATTGGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: KNFKRNNSRCCG*TPVFPSSYWSQ Trigger: TTGAGACCAATATGAACTTGGAAAGACAGGAGTCCAGCCACAACAACGACTATTATTCCTTTTGAAATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTGGCAGCCTAGAGGGCTaGGCTTCAGACTTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: TQASLSAPWPHELKGTPSGSLEG*ASDLEL Trigger: AAGTTCCAAGTCTGAAGCTCAGCCCTCTAGGCTGCC...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTATAGAGTGCTCAGAGTaGGCACAAGAACGAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TQASLSAPWPHELKGTPSIECSE*AQERKQ Trigger: TTGCTTTCGTTCTTGTGCTCACTCTGAGCACTCTAT...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAAGGGCTCCTAGTAGCTaGGTTCAGGGCAGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KTPNHILSWQGPKEWSPTRAPSS*VQGREE Trigger: TTCCTCCCTGCCCTGAACTCAGCTACTAGGAGCCCT...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTAAGGGCTCCTAGTAGCTaGGTTCAGGGCAGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVRAPSS*VQGREE Trigger: TTCCTCCCTGCCCTGAACTCAGCTACTAGGAGCCCT...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTTGAAAGGAACTCCCTCTTTTCAAGATGATCTGTaGGGCAGAATGAAGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: TQASLSAPWPHELKGTPSFQDDL*GRMKTS Trigger: GCTTGTCTTCATTCTGCCTCACAGATCATCTTGAAA...AGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| 3UTR CAA 72 bp | ACTCAGGCTTCTCTGTCTGCTCCCTGGCCTCATGAGTaGAAAGGAACTCCCTCTGTCAAAACTCCTAATCAT | + |
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Preference number: 4 (lower is better) Translates to: TQASLSAPWPHE*KGTPSVKTPNH Trigger: ATGATTAGGAGTTTTGACAGAGGGAGTTCCTTTCAACTCATGAGGCCAGGGAGCAGACAGAGAAGCCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGAGGGCAGGGAGGAACTaGAGACTCTCAATCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVRAGRN*RLSIKA Trigger: AGCCTTGATTGAGAGTCTTCAGTTCCTCCCTGCCCT...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR GCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCTCTCTGCAGCACAGGTaGAGAGAGCCTAGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGSLQHR*REPRLC Trigger: GCAGAGCCTAGGCTCTCTGCACCTGTGCTGCAGAGA...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCGGCAGCCTAGAGGGCTaGGCTTCAGACTTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGGSLEG*ASDLEL Trigger: AAGTTCCAAGTCTGAAGCTCAGCCCTCTAGGCTGCC...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR GCA 90 bp | AACGTATGCAATAAAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATCTCTGCAGCACAGGTaGAGAGAGCCTAGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NVCNKKCCLQLPPASKFTSLQHR*REPRLC Trigger: GCAGAGCCTAGGCTCTCTGCACCTGTGCTGCAGAGA...TGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTAGGGCAGGGAGGAACTaGAGACTCTCAATCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVRAGRN*RLSIKA Trigger: AGCCTTGATTGAGAGTCTTCAGTTCCTCCCTGCCCT...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGAGAATGAAGACAAGCTaGGCTCCTTCAGGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVRMKTS*APSGGS Trigger: TGAACCACCTGAAGGAGCTCAGCTTGTCTTCATTCT...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACATTCAGACTTGGAACTTaGAAGACTCTCCTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KTPNHILSWQGPKEWSPTFRLGT*KTLLAF Trigger: GAAGGCCAGGAGAGTCTTTCAAGTTCCAAGTCTGAA...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTAAGAATGAAGACAAGCTaGGCTCCTTCAGGTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVRMKTS*APSGGS Trigger: TGAACCACCTGAAGGAGCTCAGCTTGTCTTCATTCT...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTATTGCAGCCAGCATCCTaGCTTAAATCTAGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVLQPAS*LKSRIL Trigger: GAGGATCCTAGATTTAAGGCAGGATGCTGGCTGCAA...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCTTCAGACTTGGAACTTaGAAGACTCTCCTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGFRLGT*KTLLAF Trigger: GAAGGCCAGGAGAGTCTTTCAAGTTCCAAGTCTGAA...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGAGGACAGTTTCAAGATaGTCTGTGAGGCAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVRTVSR*SVRQNE Trigger: TTCATTCTGCCTCACAGATCATCTTGAAACTGTCCT...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCCTCCAGGGCTTGGATTaGTGCATGCTCATTACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGLQGLD*CMLITQ Trigger: TTGAGTAATGAGCATGCAGCAATCCAAGCCCTGGAG...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTCTCCAGGGCTTGGATTaGTGCATGCTCATTACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVLQGLD*CMLITQ Trigger: TTGAGTAATGAGCATGCAGCAATCCAAGCCCTGGAG...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTCTTAATGCCCCAATGTaGAGACAGGCAAAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVLNAPM*RQAKGQ Trigger: TTGGCCTTTTGCCTGTCTCCACATTGGGGCATTAAG...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCCTTAATGCCCCAATGTaGAGACAGGCAAAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGLNAPM*RQAKGQ Trigger: TTGGCCTTTTGCCTGTCTCCACATTGGGGCATTAAG...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAGCTGAGCTTCAGACTTaGAACTTGAAAGACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPNHILSWQGPKEWSPTAELQT*NLKDSP Trigger: AGGAGAGTCTTTCAAGTTCCAAGTCTGAAGCTCAGC...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| 3UTR CAA 72 bp | ATCCTGCTGAGGAGATCCAACATCATAAAGTCCGTTTaGCATGGAAGAGAATATGTACTAAGAGCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLRRSNIIKSV*HGREYVLRAGK Trigger: CTTCCCAGCTCTTAGTACATATTCTCTTCCATGCAAAACGGACTTTATGATGTTGGATCTCCTCAGCAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTATTTCAAGATGATCTGTaGGGCAGAATGAAGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVFQDDL*GRMKTS Trigger: GCTTGTCTTCATTCTGCCTCACAGATCATCTTGAAA...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACATCTGTCTATCTAAACTaGCTTGAAAATGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTPNHILSWQGPKEWSPTSVYLN*LENATS Trigger: GGAGGTGGCATTTTCAAGGCAGTTTAGATAGACAGA...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACTCAGAGAGAAACTTaGAGTCACTGTAAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTPNHILSWQGPKEWSPTTQRET*SHCKKV Trigger: GACTTTCTTACAGTGACTTCAAGTTTCTCTCTGAGT...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGCCAAGCTTTCACAATTaGTGTCAGTATATTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVPSFHN*CQYILV Trigger: CACAAGAATATACTGACAGCAATTGTGAAAGCTTGG...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGCACAAGTTATTAATTTaGAAATCTCTGCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVHKLLI*KSLQHR Trigger: CCTGTGCTGCAGAGATTTGCAAATTAATAACTTGTG...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTAAGGAGACTCATCAACTaGAAGGTGATCAACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVRRLIN*KVINTF Trigger: AAATGTGTTGATCACCTTGCAGTTGATGAGTCTCCT...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTAGGAGACTCATCAACTaGAAGGTGATCAACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVRRLIN*KVINTF Trigger: AAATGTGTTGATCACCTTGCAGTTGATGAGTCTCCT...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTACAAATTTTCAGATGCTaGAAGGTGCTAGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVQIFRC*KVLETF Trigger: GAATGTTTCTAGCACCTTGCAGCATCTGAAAATTTG...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AACGTATGCAATAAAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATCTGTCTATCTAAACTaGCTTGAAAATGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVCNKKCCLQLPPASKFTSVYLN*LENATS Trigger: GGAGGTGGCATTTTCAAGGCAGTTTAGATAGACAGA...TGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTACTTGAAAGACTCTCCTaGCCTTCAATTTTGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KRICTKSWEDEAWGSKCVLERLS*PSILKI Trigger: TATCTTCAAAATTGAAGGCCAGGAGAGTCTTTCAAG...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGCAGGAGATAATAAAATaGCTCACAATCTTCCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NHILSWQGPKEWSPTTLVQEIIK*LTIFPI Trigger: TATTGGGAAGATTGTGAGCCATTTTATTATCTCCTG...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCTCCAGCTGTATTGTATaGGATAAAAGTTTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGSSCIV*DKSLVT Trigger: AGTCACCAAACTTTTATCTCATACAATACAGCTGGA...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCCCAAGCTTTCACAATTaGTGTCAGTATATTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGPSFHN*CQYILV Trigger: CACAAGAATATACTGACAGCAATTGTGAAAGCTTGG...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTCACAAGTTATTAATTTaGAAATCTCTGCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVHKLLI*KSLQHR Trigger: CCTGTGCTGCAGAGATTTGCAAATTAATAACTTGTG...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCCTTGAAAGACTCTCCTaGCCTTCAATTTTGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGLERLS*PSILKI Trigger: TATCTTCAAAATTGAAGGCCAGGAGAGTCTTTCAAG...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATTTTGACTCAGAGAGAAACTTaGAGTCACTGTAAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTKKQSSLPYQSTIPGILTQRET*SHCKKV Trigger: GACTTTCTTACAGTGACTTCAAGTTTCTCTCTGAGT...CAAAATGCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CCA 90 bp | AACGTATGCAATAAAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACACAGGAGATAATAAAATaGCTCACAATCTTCCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NVCNKKCCLQLPPASKFTQEIIK*LTIFPI Trigger: TATTGGGAAGATTGTGAGCCATTTTATTATCTCCTG...TGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS CCA 90 bp | TCTACCCGTGAAGGCAGCAGTGAACAAAGGGACAAAAAGCTCCCTTaGGATCTCCTCCAGGGCTTGGATTGCTGCATGCTCATTACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: STREGSSEQRDKKLP*DLLQGLDCCMLITQ Trigger: TTGAGTAATGAGCATGCAGCAATCCAAGCCCTGGAGGAGATCCCAAGGGAGCTTTTTGTCCCTTTGTTCACTGCTGCCTTCACGGGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGGGACAAAAAGCTCCCTaGGGATCTCCTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NHILSWQGPKEWSPTTLVGQKAP*GSPPGL Trigger: AAGCCCTGGAGGAGATCCCAAGGGAGCTTTTTGTCC...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS CCA 90 bp | TTCAGGAGTTCACGCTCAGGTTCCTGCACACTTAATGCCCCAATGTaGAGACAGGCAAAAGGCCAAGCTTTCACAATTGCTGTCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: FRSSRSGSCTLNAPM*RQAKGQAFTIAVSI Trigger: TATACTGACAGCAATTGTGAAAGCTTGGCCTTTTGCCTGTCTCCACATTGGGGCATTAAGTGTGCAGGAACCTGAGCGTGAACTCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTAGGACAAAAAGCTCCCTaGGGATCTCCTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRICTKSWEDEAWGSKCVGQKAP*GSPPGL Trigger: AAGCCCTGGAGGAGATCCCAAGGGAGCTTTTTGTCC...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACATCAGGACATACGGTCTaGCAGCCAGCATCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTPNHILSWQGPKEWSPTSGHTV*QPASCL Trigger: AAGGCAGGATGCTGGCTGCAAGACCGTATGTCCTGA...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAATATGTACTAAGAGCTGGGAAGATGAAGCTTGGGGGTCTAAGTGTGTAGATCTCCTCCAGGGCTaGGATTGCTGCATGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KRICTKSWEDEAWGSKCVDLLQG*DCCMLI Trigger: AATGAGCATGCAGCAATCCAAGCCCTGGAGGAGATC...TACACACTTAGACCCCCAAGCTTCATCTTCCCAGCTCTTAGTACATATTCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCTCAGGACATACGGTCTaGCAGCCAGCATCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGSGHTV*QPASCL Trigger: AAGGCAGGATGCTGGCTGCAAGACCGTATGTCCTGA...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS GCA 90 bp | AGTTCAATTGTCTCTGCACATCTTCAACCTTCTGTCTATCTAAACTaGCTTGAAAATGCCACCTCCCATAGCAATGGACAGGGATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSIVSAHLQPSVYLN*LENATSHSNGQGWD Trigger: ATCCCATCCCTGTCCATTGCTATGGGAGGTGGCATTTTCAAGGCAGTTTAGATAGACAGAAGGTTGAAGATGTGCAGAGACAATTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAACCTTAGTGTCCTGGCCTTCAATTTaGAAGATAGAGTGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NHILSWQGPKEWSPTTLVSWPSI*KIECSE Trigger: CTCTGAGCACTCTATCTTCAAAATTGAAGGCCAGGA...CACTAAGGTTGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATTTTGGATCTCCTCCAGGGCTaGGATTGCTGCATGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KTKKQSSLPYQSTIPGILDLLQG*DCCMLI Trigger: AATGAGCATGCAGCAATCCAAGCCCTGGAGGAGATC...CAAAATGCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | ACGTCTAAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCCTTCAGACTTGGAACTaGAAAGACTCTCCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSKTKKQSSLPYQSTIPGLQTWN*KDSPGL Trigger: AAGGCCAGGAGAGTCTTTCAAGTTCCAAGTCTGAAG...GCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTTAGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATGCAGGAAAAGTTCTTCAGACTTGGAACTaGAAAGACTCTCCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSVVFNCHLPPNSHAGKVLQTWN*KDSPGL Trigger: AAGGCCAGGAGAGTCTTTCAAGTTCCAAGTCTGAAG...AACTTTTCCTGCATGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS TCA 90 bp | AAAAGTTTGGTGACTTCAGTAAGAGGAGACTCATCAACTGCAAGGTaGTCAACACATTTCAGATCCAGATGGCTTAATGCATGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KSLVTSVRGDSSTAR*STHFRSRWLNACLH Trigger: ATGCAGACATGCATTAAGCCATCTGGATCTGAAATGTGTTGATCACCTTGCAGTTGATGAGTCTCCTCTTACTGAAGTCACCAAACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTCCTAATCATATTCTGTCTTGGCAAGGTCCCAAAGAGTGGAGTCCAACAGCCAAGCTTTCACAATaGCTGTCAGTATATTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KTPNHILSWQGPKEWSPTAKLSQ*LSVYSC Trigger: ACAAGAATATACTGACAGCAATTGTGAAAGCTTGGC...TGTTGGACTCCACTCTTTGGGACCTTGCCAAGACAGAATATGATTAGGAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AACGTATGCAATAAAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACATCCTGGCCTTCAATTTaGAAGATAGAGTGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVCNKKCCLQLPPASKFTSWPSI*KIECSE Trigger: CTCTGAGCACTCTATCTTCAAAATTGAAGGCCAGGA...TGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AACGTATGCAATAAAAAGTGTTGTCTTCAATTGCCACCTGCCTCCAAATTCACAACACAAGTTATTAATTaGCAAATCTCTGCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NVCNKKCCLQLPPASKFTTQVIN*QISAAQ Trigger: CTGTGCTGCAGAGATTTGCAAATTAATAACTTGTGT...TGTGAATTTGGAGGCAGGTGGCAATTGAAGACAACACTTTTTATTGCATACGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAGAAACAAAGTTCTCTTCCCTACCAGTCTACTATACCAGGCATTTTGACACAAGTTATTAATTaGCAAATCTCTGCAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: KTKKQSSLPYQSTIPGILTQVIN*QISAAQ Trigger: CTGTGCTGCAGAGATTTGCAAATTAATAACTTGTGT...CAAAATGCCTGGTATAGTAGACTGGTAGGGAAGAGAACTTTGTTTCTTTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS TCA 72 bp | GGGCTCCTAGTAGCTGAGTTCAGGGCAGGGAGGAACTaGAGACTCTCAATCAAGGCTTTCAGGAGTTCACGC | + |
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Preference number: 6 (lower is better) Translates to: GLLVAEFRAGRN*RLSIKAFRSSR Trigger: GCGTGAACTCCTGAAAGCCTTGATTGAGAGTCTTCAGTTCCTCCCTGCCCTGAACTCAGCTACTAGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS GCA 72 bp | TCCCTTGGGATCTCCTCCAGGGCTTGGATTGCTGCATaGTCATTACTCAATAGACTCTGTGTAGCAAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SLGISSRAWIAA*SLLNRLCVARS Trigger: GGATCTTGCTACACAGAGTCTATTGAGTAATGAGCATGCAGCAATCCAAGCCCTGGAGGAGATCCCAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS CCA 72 bp | TCACGCTCAGGTTCCTGCACACTTAATGCCCCAATGTaGAGACAGGCAAAAGGCCAAGCTTTCACAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRSGSCTLNAPM*RQAKGQAFTIA Trigger: AGCAATTGTGAAAGCTTGGCCTTTTGCCTGTCTCCACATTGGGGCATTAAGTGTGCAGGAACCTGAGCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS CAA 90 bp | AGACAGGCAAAAGGCCAAGCTTTCACAATTGCTGTCAGTATATTCTaGTGTCTACCCGTGAAGGCAGCAGTGAACAAAGGGACAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RQAKGQAFTIAVSIF*CLPVKAAVNKGTKS Trigger: GCTTTTTGTCCCTTTGTTCACTGCTGCCTTCACGGGTAGACACAAGAATATACTGACAGCAATTGTGAAAGCTTGGCCTTTTGCCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS CAA 90 bp | CGAAAGCAAATTGTCGAATTAGTACTGATCTCAGGACATACGGTCTaGCAGCCAGCATCCTGCCTTAAATCTAGGATCCTCAGTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: RKQIVELVLISGHTV*QPASCLKSRILSLG Trigger: CCCTAAACTGAGGATCCTAGATTTAAGGCAGGATGCTGGCTGCAAGACCGTATGTCCTGAGATCAGTACTAATTCGACAATTTGCTTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS GCA 72 bp | AATGTGGAGACAGGCAAAAGGCCAAGCTTTCACAATTaGTGTCAGTATATTCTTGTGTCTACCCGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: NVETGKRPSFHN*CQYILVSTREG Trigger: GCCTTCACGGGTAGACACAAGAATATACTGACAGCAATTGTGAAAGCTTGGCCTTTTGCCTGTCTCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS GCA 72 bp | GTCTCTGCACATCTTCAACCTTCTGTCTATCTAAACTaGCTTGAAAATGCCACCTCCCATAGCAATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: VSAHLQPSVYLN*LENATSHSNGQ Trigger: CTGTCCATTGCTATGGGAGGTGGCATTTTCAAGGCAGTTTAGATAGACAGAAGGTTGAAGATGTGCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS TCA 72 bp | GTGACTTCAGTAAGAGGAGACTCATCAACTGCAAGGTaGTCAACACATTTCAGATCCAGATGGCTTAATGCA | + |
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Preference number: 6 (lower is better) Translates to: VTSVRGDSSTAR*STHFRSRWLNA Trigger: TGCATTAAGCCATCTGGATCTGAAATGTGTTGATCACCTTGCAGTTGATGAGTCTCCTCTTACTGAAGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS GCA 72 bp | CTTTCTGCCTCCTGTAGCATTAAGTTCAATTGTCTCTaGACATCTTCAACCTTCTGTCTATCTAAACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSASCSIKFNCL*TSSTFCLSKLP Trigger: AGGCAGTTTAGATAGACAGAAGGTTGAAGATGTGCAGAGACAATTGAACTTAATGCTACAGGAGGCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS CAA 72 bp | CAAGCTGAGCTCCTTCAGGTGGTTCATATGACTCAGTaGGGTGATAAAATTTCTAAAGGTTCTCCCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: QAELLQVVHMTQ*GDKISKGSPIQ Trigger: TTGAATGGGAGAACCTTTAGAAATTTTATCACCCAACTGAGTCATATGAACCACCTGAAGGAGCTCAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS TCA 72 bp | ATTTTAGACAGGCTAAGACTGTCCAGCTGTATTGTATaGGATAAAAGTTTGGTGACTTCAGTAAGAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ILDRLRLSSCIV*DKSLVTSVRGD Trigger: GTCTCCTCTTACTGAAGTCACCAAACTTTTATCTCATACAATACAGCTGGACAGTCTTAGCCTGTCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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| CDS CCA 72 bp | CAAGGTGCTAGAAACATTCTGCAGGAGATAATAAAATaGCTCACAATCTTCCCAATATATTGGATTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QGARNILQEIIK*LTIFPIYWIVV Trigger: AACAACAATCCAATATATTGGGAAGATTGTGAGCCATTTTATTATCTCCTGCAGAATGTTTCTAGCACCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113176.3 ENSMUST00000118821.8 |
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