Pregenerated sensors for PRAMEL29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046262Ensembl transcript IDs: ENSMUST00000105753.8, ENSMUST00000105754.8, ENSMUST00000105755.2, ENSMUST00000105757.8, ENSMUST00000146836.2, ENSMUST00000147855.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCAAACTCATTCTGGCTACACTTTGAGGTCAATTCTAGGATATaGCCTTGTGTTATCTGCTCTCACAACTCACAGTATTCTAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LPNSFWLHFEVNSRI*PCVICSHNSQYSSL Trigger: CAGACTAGAATACTGTGAGTTGTGAGAGCAGATAACACAAGGCCATATCCTAGAATTGACCTCAAAGTGTAGCCAGAATGAGTTTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR TCA 90 bp | ATTGGGTTGTTTCAAAGCAGACACTATGGAGCTGTCTTTTGGCTCTaGGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: IGLFQSRHYGAVFWL*VYPGAQDKNFLICV Trigger: CACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGAAACAACCCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR GCA 90 bp | TATTGTAACACACTCAAACTACAAGTGCTTGATACTTGCTGCAGATaGAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: YCNTLKLQVLDTCCR*NIHSPAQRKVLTFL Trigger: CAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGAGTGTGTTACAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR GCA 90 bp | TGGCTACACTTTGAGGTCAATTCTAGGATATGGCCTTGTGTTATCTaGTCTCACAACTCACAGTATTCTAGTCTGAGGTCTGTAGTTATC | + |
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Preference number: 1 (lower is better) Translates to: WLHFEVNSRIWPCVI*SHNSQYSSLRSVVI Trigger: GATAACTACAGACCTCAGACTAGAATACTGTGAGTTGTGAGAGCAGATAACACAAGGCCATATCCTAGAATTGACCTCAAAGTGTAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR TCA 90 bp | GAGGAAGGTATTGACTTTCCTGTGTATCTCACACTTTTAGGTGATTaGCATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATT | + |
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Preference number: 1 (lower is better) Translates to: EEGIDFPVYLTLLGD*HFHAPFSSGHSLSI Trigger: AATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCACCTAAAAGTGTGAGATACACAGGAAAGTCAATACCTTCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR TCA 90 bp | AGCTCATCTGTTCAACCTGTTTCTGAACTGAAAACCTTTCACACATaGGCAATAAGATTCATGCTTATGCCTCATCATACATATCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: SSSVQPVSELKTFHT*AIRFMLMPHHTYLS Trigger: GCTAAGATATGTATGATGAGGCATAAGCATGAATCTTATTGCTCATGTGTGAAAGGTTTTCAGTTCAGAAACAGGTTGAACAGATGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTCCAGAGGGGCAGGGTAACACTCATAGATCAGCTGACTCAGCAGGGCTGTCAAGTGCTTGATACTTaGTGCAGATGCAACATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ALQRGRVTLIDQLTQQGCQVLDT*CRCNIH Trigger: ATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTG...ACAGCCCTGCTGAGTCAGCTGATCTATGAGTGTTACCCTGCCCCTCTGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CCA 90 bp | TACACCACTGTCATCATAGCACTCCAGAGGGGCAGGGTAACACTCATAGATCAGCTCAGCAGGGCTGTGTaGTGTAGAAGTTGTTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: YTTVIIALQRGRVTLIDQLSRAV*CRSCFK Trigger: CTTGAAACAACTTCTACACCACACAGCCCTGCTGAG...CTGATCTATGAGTGTTACCCTGCCCCTCTGGAGTGCTATGATGACAGTGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTCAAAGCAGACACTATaGAGCTGTCTTTTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CLILAADATSIHQLRGRYSKQTL*SCLLAL Trigger: CAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGA...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTATAACCCACCTGACCTCTCTGAGGTaGGATAATTGGCTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LLPQNGNIGSPYHKCITHLTSLR*DNWLRA Trigger: TGCCCTAAGCCAATTATCTCACCTCAGAGAGGTCAG...GTGGGTTATACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATAGTCTCATCAAATGGTaGCTCTATTGTAACACACTC | + |
|
Preference number: 2 (lower is better) Translates to: CLILAADATSIHQLRGRYSLIKW*LYCNTL Trigger: GAGTGTGTTACAATAGAGGCACCATTTGATGAGACT...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGGAGCTGTCTTTTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTGCCAGTCTCATCAAATaGTGCCTCTATTGTAACACA | + |
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Preference number: 2 (lower is better) Translates to: LWSCLLALSISRSSGQKLASLIK*CLYCNT Trigger: TGTGTTACAATAGAGGCACCATTTGATGAGACTGGC...AAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CCA 90 bp | ATATCAGGCCAGCATGGTGCATGTAGGAAGAACTACCTACCTCAAACAAAATTTCTCAGCAGGGCTGTGTaGTGTAGAAGTTGTTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ISGQHGACRKNYLPQTKFLSRAV*CRSCFK Trigger: CTTGAAACAACTTCTACACCACACAGCCCTGCTGAG...AAATTTTGTTTGAGGTAGGTAGTTCTTCCTACATGCACCATGCTGGCCTGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTATAACCCACCACATTTAGAGCATTGGGTTGTTTCAAAGCAGACACTATGGCTCAGAGGAAGGTATTaGCTTTCCTGTGTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: MYNPPHLEHWVVSKQTLWLRGRY*LSCVSH Trigger: GTGAGATACACAGGAAAGTCAATACCTTCCTCTGAG...CCATAGTGTCTGCTTTGAAACAACCCAATGCTCTAAATGTGGTGGGTTATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR CAA 90 bp | TTAGAGCATTGGGTTGTTTCAAAGCAGACACTATGGAGCTGTCTTTaGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: LEHWVVSKQTLWSCL*ALSISRSSGQKLSN Trigger: ATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGAAACAACCCAATGCTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTCAAACTACAAGTGCTTaGTACTTGCTGCAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: LALSISRSSGQKLSNLCVQTTSA*YLLQMQ Trigger: TTGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTG...AACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTCTGACCTCTCTGAGGTaGGATAATTGGCTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KLILLPQNGNIGSPYHKCLTSLR*DNWLRA Trigger: TGCCCTAAGCCAATTATCTCACCTCAGAGAGGTCAG...ACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTGCCAGTCTCATCAAATaGTGCCTCTATTGTAACACA | + |
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Preference number: 2 (lower is better) Translates to: PGAQDKNFLICVLVLHHCASLIK*CLYCNT Trigger: TGTGTTACAATAGAGGCACCATTTGATGAGACTGGC...ACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR TCA 90 bp | ATATCAGGCCAGCATGGTGCATGTAGGAAGAACTACCTACCTCAAACAAAATTTGTCCACTATACAACATaGCTCCAATTCCAGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: ISGQHGACRKNYLPQTKFVHYTT*LQFQDF Trigger: AAAATCCTGGAATTGGAGTCATGTTGTATAGTGGAC...AAATTTTGTTTGAGGTAGGTAGTTCTTCCTACATGCACCATGCTGGCCTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTAACCTGTTTCTGAACTaGAAACCTTTCACACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLALSISRSSGQKLSNLCNLFLN*KPFTHE Trigger: CTCATGTGTGAAAGGTTTTCAGTTCAGAAACAGGTT...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTATAACCCACGTGCTTGATACTTGCTaGAGATGCAACATCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: LLPQNGNIGSPYHKCITHVLDTC*RCNIHS Trigger: TGAATGGATGTTGCATCTGCAGCAAGTATCAAGCAC...GTGGGTTATACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTAATGTGTTTTATCTaGTCTTACTGGACCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLALSISRSSGQKLSNLCVMCFI*SYWTLS Trigger: TGAGAGGGTCCAGTAAGACCAGATAAAACACATTAC...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTATAACCCACAGTCTCATCAAATGGTaGCTCTATTGTAACACACTC | + |
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Preference number: 2 (lower is better) Translates to: LLPQNGNIGSPYHKCITHSLIKW*LYCNTL Trigger: GAGTGTGTTACAATAGAGGCACCATTTGATGAGACT...GTGGGTTATACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGTCTCATCAAATGGTaGCTCTATTGTAACACACTC | + |
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Preference number: 2 (lower is better) Translates to: MLHLAVDIHLVLETDEILSLIKW*LYCNTL Trigger: GAGTGTGTTACAATAGAGGCACCATTTGATGAGACT...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR CAA 90 bp | ATTGACATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATaGGAGACTGATGAAATCCTAAGTTTCGATTTCTCGGTTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: IDIFMLHLAVDIHLV*ETDEILSFDFSVSQ Trigger: TTGTGAAACCGAGAAATCGAAACTTAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTTGTTCAACCTGTTTCTaGACTGAAAACCTTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: KLILLPQNGNIGSPYHKCCSTCF*TENLSH Trigger: GTGTGAAAGGTTTTCAGTTCAGAAACAGGTTGAACA...ACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTCCAGAGGGGCAGGGTAACACTCATAGATCAGCTGACTCAGCAGGGCTGTTCAAACTACAAGTGCTaGATACTTGCTGCAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: ALQRGRVTLIDQLTQQGCSNYKC*ILAADA Trigger: TGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGA...ACAGCCCTGCTGAGTCAGCTGATCTATGAGTGTTACCCTGCCCCTCTGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR TCA 72 bp | GGTAATCCAAGTCTGACTGTGAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGGGCTTTTTCAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: GNPSLTVRGHSY*CKVSPRAFSGT Trigger: GGTGCCTGAAAAAGCCCTTGGAGACACTTTGCATCAGTAACTGTGACCTCTCACAGTCAGACTTGGATTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR CCA 72 bp | AGGCATGATTCAGGGCATGGCTGGAAAACACAGCAATaGATATATCAGGCCAGCATGGTGCATGTAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RHDSGHGWKTQQ*IYQASMVHVGR Trigger: TCTTCCTACATGCACCATGCTGGCCTGATATATCCATTGCTGTGTTTTCCAGCCATGCCCTGAATCATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR TCA 72 bp | GGTGAGATAATTGGCTTAGGGCAGGCAGCAAGGCACTaGACTGAAAGTCCACTATACAACATGACTCCAATT | + |
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Preference number: 3 (lower is better) Translates to: GEIIGLGQAARH*TESPLYNMTPI Trigger: AATTGGAGTCATGTTGTATAGTGGACTTTCAGTTCAGTGCCTTGCTGCCTGCCCTAAGCCAATTATCTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR CCA 72 bp | CATTTAGAGCATTGGGTTGTTTCAAAGCAGACACTATaGAGCTGTCTTTTGGCTCTGAGTATATCCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: HLEHWVVSKQTL*SCLLALSISRS Trigger: GCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGAAACAACCCAATGCTCTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR GCA 72 bp | TATTGTAACACACTCAAACTACAAGTGCTTGATACTTaGTGCAGATGCAACATCCATTCACCAGCTCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: YCNTLKLQVLDT*CRCNIHSPAQR Trigger: CCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGAGTGTGTTACAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTACTATGGAGCTGTCTTTaGGCTCTGAGTATATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: MLHLAVDIHLVLETDEILLWSCL*ALSISR Trigger: CCTGGATATACTCAGAGCCAAAAGACAGCTCCATAG...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR TCA 72 bp | TTTCAAAGCAGACACTATGGAGCTGTCTTTTGGCTCTaGGTATATCCAGGAGCTCAGGACAAAAACTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: FQSRHYGAVFWL*VYPGAQDKNFL Trigger: TAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR CCA 72 bp | TCATTCTGGCTACACTTTGAGGTCAATTCTAGGATATaGCCTTGTGTTATCTGCTCTCACAACTCACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: SFWLHFEVNSRI*PCVICSHNSQY Trigger: ATACTGTGAGTTGTGAGAGCAGATAACACAAGGCCATATCCTAGAATTGACCTCAAAGTGTAGCCAGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAGCTCAGAGGAAGGTATaGACTTTCCTGTGTATCTCA | + |
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Preference number: 3 (lower is better) Translates to: MLHLAVDIHLVLETDEILAQRKV*TFLCIS Trigger: TGAGATACACAGGAAAGTCAATACCTTCCTCTGAGC...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTACACCTACTAGGGCTGTaGTTAAGAGTTCTCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: MLHLAVDIHLVLETDEILHLLGL*LRVLRS Trigger: ACTTCTGAGAACTCTTAACAACAGCCCTAGTAGGTG...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTATCAAACTACAAGTGCTaGATACTTGCTGCAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: MLHLAVDIHLVLETDEILSNYKC*ILAADA Trigger: TGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGA...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATTAAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATCTATGGAGCTGTCTTTaGGCTCTGAGTATATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TIKLILLPQNGNIGSPYHLWSCL*ALSISR Trigger: CCTGGATATACTCAGAGCCAAAAGACAGCTCCATAG...ATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTTAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATTAAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATTCAAACTACAAGTGCTaGATACTTGCTGCAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: TIKLILLPQNGNIGSPYHSNYKC*ILAADA Trigger: TGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGA...ATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTTAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATTAAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATCTAAGATGCAGATGTTaGAGTTCACAAATATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TIKLILLPQNGNIGSPYHLRCRC*SSQIFR Trigger: CCTGAATATTTGTGAACTCAAACATCTGCATCTTAG...ATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTTAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| CDS-3UTR CCA 90 bp | GCACTCCAGAGGGGCAGGGTAACACTCATAGATCAGCTGACTCAGCAGGGCTGTCCAGGTTCTGGAGGGTaGGTGGAGAATAGGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALQRGRVTLIDQLTQQGCPGSGG*VENRIP Trigger: AGGAATCCTATTCTCCACCCACCCTCCAGAACCTGG...ACAGCCCTGCTGAGTCAGCTGATCTATGAGTGTTACCCTGCCCCTCTGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATCAGGCAGCAAGGCACTaGACTGAAAGTCCACTATAC | + |
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Preference number: 4 (lower is better) Translates to: CLILAADATSIHQLRGRYQAARH*TESPLY Trigger: GTATAGTGGACTTTCAGTTCAGTGCCTTGCTGCCTG...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR TCA 90 bp | TACAAGTGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGACTGACCTCTCTGAGGTaGGATAATTGGCTTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YKCLILAADATSIHQLRGLTSLR*DNWLRA Trigger: TGCCCTAAGCCAATTATCTCACCTCAGAGAGGTCAG...TCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLILAADATSIHQLRGRYRGHSY*CKVSPR Trigger: CCTTGGAGACACTTTGCATCAGTAACTGTGACCTCT...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATCTGCGTGTACAGTTTTaGAGATTTCTATCACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLILAADATSIHQLRGRYLRVQF*RFLSPR Trigger: CCTCGGTGATAGAAATCTTCAAAACTGTACACGCAG...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGTGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGACTGCGTGTACAGTTTTaGAGATTTCTATCACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKCLILAADATSIHQLRGLRVQF*RFLSPR Trigger: CCTCGGTGATAGAAATCTTCAAAACTGTACACGCAG...TCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCATAGAATCTTTTCTCTaGTGGGCCCACTGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCNIHSPAQRKVLTFLCIIESFL*WAHCSK Trigger: CTTGCTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...GATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | AGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCGCCACGCAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RCNIHSPAQRKVLTFLCIATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGCGTGGC...GATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAGGCCAGCATGGTGCATGTAGGAAGAACTACCTACCTCAAACAAAATTTGTTCTGGAGGGTGGGTaGAGAATAGGATTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISGQHGACRKNYLPQTKFVLEGG*RIGFLC Trigger: ACAGAGGAATCCTATTCTCCACCCACCCTCCAGAAC...AAATTTTGTTTGAGGTAGGTAGTTCTTCCTACATGCACCATGCTGGCCTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTGTTCTGGAGGGTGGGTaGAGAATAGGATTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LALSISRSSGQKLSNLCVVLEGG*RIGFLC Trigger: ACAGAGGAATCCTATTCTCCACCCACCCTCCAGAAC...AACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGCTGTCTTTTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTCTCCTCAAAAATTATTaGGAACAGACTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWSCLLALSISRSSGQKLLLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAG...AAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATTCAAAGCAGACACTATaGAGCTGTCTTTTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMQHPFTSSEEGIDFPVYSKQTL*SCLLAL Trigger: CAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGA...ATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| 3UTR CAA 72 bp | GGTGCCTCTATTGTAACACACTCAAACTACAAGTGCTaGATACTTGCTGCAGATGCAACATCCATTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GASIVTHSNYKC*ILAADATSIHQ Trigger: CTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTAGTTTGAGTGTGTTACAATAGAGGCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| 3UTR CAA 72 bp | TGGGTTGTTTCAAAGCAGACACTATGGAGCTGTCTTTaGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WVVSKQTLWSCL*ALSISRSSGQK Trigger: TTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGAAACAACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATGTCCACTATACAACATaGCTCCAATTCCAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLILAADATSIHQLRGRYVHYTT*LQFQDF Trigger: AAAATCCTGGAATTGGAGTCATGTTGTATAGTGGAC...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGTCAGGCAGCAAGGCACTaGACTGAAAGTCCACTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLAVDIHLVLETDEILSQAARH*TESPLY Trigger: GTATAGTGGACTTTCAGTTCAGTGCCTTGCTGCCTG...ACTTAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCGTTCTGGAGGGTGGGTaGAGAATAGGATTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEIVLEGG*RIGFLC Trigger: ACAGAGGAATCCTATTCTCCACCCACCCTCCAGAAC...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTCCTCCAAAGGCCATGATCCTGTCTTCATCTTGAAACCCAGTGTTGCAGGAGACAGTGTAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSSKGHDPVFILKPSVAGDSVV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTACACTGTCTCC...TGCAACACTGGGTTTCAAGATGAAGACAGGATCATGGCCTTTGGAGGAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCTCACACTTTTAGGTGGAGACAGTGTAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTSSEEGIDFPVYLTLLGGDSVV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTACACTGTCTCC...ACCTAAAAGTGTGAGATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGTGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKCLILAADATSIHQLRGNRIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATT...TCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTTTGCACCTACTGGTTTaGACCTTTTGTGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQDKNFLICVLVLHHCLHLLV*TFCASS Trigger: ACTGCTTGCACAAAAGGTTCAAACCAGTAGGTGCAA...ACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATGAGGTAACTATGATGTaGTCTAGTGTGAGTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMQHPFTSSEEGIDFPVYEVTMM*SSVSVK Trigger: TTTCACACTCACACTAGATCACATCATAGTTACCTC...ATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGTAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: CLILAADATSIHQLRGRYCSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTACA...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLVLETDEILRGHSY*CKVSPR Trigger: CCTTGGAGACACTTTGCATCAGTAACTGTGACCTCT...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCATAGAATCTTTTCTCTaGTGGGCCCACTGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEIIESFL*WAHCSK Trigger: CTTGCTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAATAGAATCTTTTCTCTaGTGGGCCCACTGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLVLETDEILIESFL*WAHCSK Trigger: CTTGCTGCAGTGGGCCCAGCAGAGAAAAGATTCTAT...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTAAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATCCAGGTTCTGGAGGGTaGGTGGAGAATAGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIKLILLPQNGNIGSPYHPGSGG*VENRIP Trigger: AGGAATCCTATTCTCCACCCACCCTCCAGAACCTGG...ATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTTAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATATTACTCCCACAAAATaGCAACATTGGGTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QMQHPFTSSEEGIDFPVYITPTK*QHWVSL Trigger: TAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAAT...ATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | AGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCNIHSPAQRKVLTFLCINRIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATT...GATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGTTTGCACCTACTGGTTTaGACCTTTTGTGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLAVDIHLVLETDEILSLHLLV*TFCASS Trigger: ACTGCTTGCACAAAAGGTTCAAACCAGTAGGTGCAA...ACTTAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCAAGTCTTCCCTTCATaGGAAGAACTTCAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEIQVFPS*EELQSS Trigger: TGACGACTGAAGTTCTTCTCATGAAGGGAAGACTTG...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTACAAGTCTTCCCTTCATaGGAAGAACTTCAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLVLETDEILQVFPS*EELQSS Trigger: TGACGACTGAAGTTCTTCTCATGAAGGGAAGACTTG...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | TTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCTCACACTTTTAGGTGAGGTAACTATGATGTaGTCTAGTGTGAGTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTSSEEGIDFPVYLTLLGEVTMM*SSVSVK Trigger: TTTCACACTCACACTAGATCACATCATAGTTACCTC...ACCTAAAAGTGTGAGATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTCCTCAAAAATTATTaGGAACAGACTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEILLKNY*EQTLGQ Trigger: CTGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAG...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTCATCATAGCGCCACGCAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: QDKNFLICVLVLHHCHHSATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGCGTGGC...GCTATGATGACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTGCCACGCAGGTATCATaGCCTTCAAGATCCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LSISRSSGQKLSNLCVSIATQVS*PSRSLY Trigger: ATATAGGGATCTTGAAGGCCATGATACCTGCGTGGC...AATACTAACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGGACTGTTCTCAATTaGCTGCTTCTCTGTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLVLETDEILRTVLN*LLLCRE Trigger: TTCACGACAGAGAAGCAGCCAATTGAGAACAGTCCT...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCGGAGACAGTGTAGTGTaGGAAGTTGAGAAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEIGDSVV*EVEKSS Trigger: GCTTGATTTCTCAACTTCCCACACTACACTGTCTCC...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAAGTTCAAAGCAGACACTATaGAGCTGTCTTTTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLAVDIHLVLETDEILSSKQTL*SCLLAL Trigger: CAGAGCCAAAAGACAGCTCCATAGTGTCTGCTTTGA...ACTTAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR TCA 90 bp | CAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTCATCATAGCCTGCGTGTACAGTTTTaGAGATTTCTATCACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDKNFLICVLVLHHCHHSLRVQF*RFLSPR Trigger: CCTCGGTGATAGAAATCTTCAAAACTGTACACGCAG...GCTATGATGACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTCATCATAGCAGGACTGTTCTCAATTaGCTGCTTCTCTGTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDKNFLICVLVLHHCHHSRTVLN*LLLCRE Trigger: TTCACGACAGAGAAGCAGCCAATTGAGAACAGTCCT...GCTATGATGACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTAGGACTGTTCTCAATTaGCTGCTTCTCTGTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSISRSSGQKLSNLCVSIRTVLN*LLLCRE Trigger: TTCACGACAGAGAAGCAGCCAATTGAGAACAGTCCT...AATACTAACACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATAACCCACCACATTTAGAGCATTGGGTTGTTTCAAAGCAGACACTATGGAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MYNPPHLEHWVVSKQTLWNRIPL*LLLKSH Trigger: ATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATT...CCATAGTGTCTGCTTTGAAACAACCCAATGCTCTAAATGTGGTGGGTTATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGCTCTGAGTATATCCAGGAGCTCAGGACAAAAACTTTCTAATCTGTGTTGTAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LLALSISRSSGQKLSNLCCSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTACA...ACACAGATTAGAAAGTTTTTGTCCTGAGCTCCTGGATATACTCAGAGCCAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCGTCCACTATACAACATaGCTCCAATTCCAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEIVHYTT*LQFQDF Trigger: AAAATCCTGGAATTGGAGTCATGTTGTATAGTGGAC...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTAATTACTCCCACAAAATaGCAACATTGGGTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MLHLAVDIHLVLETDEILITPTK*QHWVSL Trigger: TAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAAT...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| 3UTR CAA 72 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATaGGAGACTGATGAAATCCTAAGTTTCGATTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLV*ETDEILSFDFS Trigger: CGAGAAATCGAAACTTAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR TCA 90 bp | TTCATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCTGTAGTGTGGGAAGTTaGGAAATCAAGCTGAATATT | + |
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Preference number: 4 (lower is better) Translates to: FMLHLAVDIHLVLETDEICSVGS*EIKLNI Trigger: AATATTCAGCTTGATTTCTCAACTTCCCACACTACA...GATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR TCA 90 bp | AAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTGAGGTAACTATGATGTaGTCTAGTGTGAGTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KLILLPQNGNIGSPYHKCEVTMM*SSVSVK Trigger: TTTCACACTCACACTAGATCACATCATAGTTACCTC...ACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| 3UTR CAA 72 bp | CTCAGATATGTTATGTATATAACAGTGCTAGGTTTATaGTGGCCAGATTGTCAAGGACTCCCTAACTTAATA | + |
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Preference number: 4 (lower is better) Translates to: LRYVMYITVLGL*WPDCQGLPNLI Trigger: TATTAAGTTAGGGAGTCCTTGACAATCTGGCCACAATAAACCTAGCACTGTTATATACATAACATATCTGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| CDS TCA 90 bp | GAATTGCCAGGTTCTGGAGGGTGGGTGGAGAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCATCCTGATCTGGACAATGGCGACAGA | + |
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Preference number: 5 (lower is better) Translates to: ELPGSGGWVENRIPL*LLLKSHPDLDNGDR Trigger: TCTGTCGCCATTGTCCAGATCAGGATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATTCTCCACCCACCCTCCAGAACCTGGCAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
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| CDS CCA 90 bp | CAAGATCCCTATATGTCCATCAGTGAAGGCCTCCTCAAAAATTATTaGGAACAGACTCTGGGGCAGGTCCGTGAGAGCAGAAATGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: QDPYMSISEGLLKNY*EQTLGQVRESRNGQ Trigger: TTGGCCATTTCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGGCCTTCACTGATGGACATATAGGGATCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS-3UTR CAA 90 bp | GCACTCCAGAGGGGCAGGGTAACACTCATAGATCAGCTGACTCAGCAGGGCTGTTTCAAAGTCTCCAGGTaGCAATTATTTATCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALQRGRVTLIDQLTQQGCFKVSR*QLFICF Trigger: GAAGCAGATAAATAATTGCAACCTGGAGACTTTGAA...ACAGCCCTGCTGAGTCAGCTGATCTATGAGTGTTACCCTGCCCCTCTGGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| CDS-3UTR CAA 90 bp | AGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCCCTCCTCAAAAATTATaGGGAACAGACTCTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RCNIHSPAQRKVLTFLCIPPQKL*GTDSGA Trigger: TGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGG...GATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | TTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCTCACACTTTTAGGTCTATGGAGCTGTCTTTaGGCTCTGAGTATATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FTSSEEGIDFPVYLTLLGLWSCL*ALSISR Trigger: CCTGGATATACTCAGAGCCAAAAGACAGCTCCATAG...ACCTAAAAGTGTGAGATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | TACAAGTGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAACCACATTTAGAGCATaGGGTTGTTTCAAAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: YKCLILAADATSIHQLRGTTFRA*GCFKAD Trigger: GTCTGCTTTGAAACAACCCAATGCTCTAAATGTGGT...TCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCACTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS TCA 90 bp | GAATTGCCAGGTTCTGGAGGGTGGGTGGAGAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCATCTTTATAAATTTGGCTGGTATCAA | + |
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Preference number: 5 (lower is better) Translates to: ELPGSGGWVENRIPL*LLLKSHLYKFGWYQ Trigger: TTGATACCAGCCAAATTTATAAAGATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATTCTCCACCCACCCTCCAGAACCTGGCAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147855.2 |
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| CDS-3UTR CAA 90 bp | ATGCTCCATTTAGCAGTGGACATTCACTTAGTATTGGAGACTGATGAAATCCTACCTCCTCAAAAATTATaGGGAACAGACTCTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: MLHLAVDIHLVLETDEILPPQKL*GTDSGA Trigger: TGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGG...TAGGATTTCATCAGTCTCCAATACTAAGTGAATGTCCACTGCTAAATGGAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | TGCTTGATACTTGCTGCAGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATCTAAGATGCAGATGTTaGAGTTCACAAATATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: CLILAADATSIHQLRGRYLRCRC*SSQIFR Trigger: CCTGAATATTTGTGAACTCAAACATCTGCATCTTAG...ATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGCAGCAAGTATCAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | TTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCTCACACTTTTAGGTACCACATTTAGAGCATaGGGTTGTTTCAAAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: FTSSEEGIDFPVYLTLLGTTFRA*GCFKAD Trigger: GTCTGCTTTGAAACAACCCAATGCTCTAAATGTGGT...ACCTAAAAGTGTGAGATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | AGATGCAACATCCATTCACCAGCTCAGAGGAAGGTATTGACTTTCCTGTGTATCCTAAGATGCAGATGTTaGAGTTCACAAATATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RCNIHSPAQRKVLTFLCILRCRC*SSQIFR Trigger: CCTGAATATTTGTGAACTCAAACATCTGCATCTTAG...GATACACAGGAAAGTCAATACCTTCCTCTGAGCTGGTGAATGGATGTTGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS TCA 90 bp | AGAGTTTCTGGAGACAGTGTAGTGTGGGAAGTTGAGAAATCAAGCTaGATATTATCTCCTCATCAAGCTTTTCAGAATCACCAAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: RVSGDSVVWEVEKSS*ILSPHQAFQNHQNW Trigger: CCAGTTTTGGTGATTCTGAAAAGCTTGATGAGGAGATAATATTCAGCTTGATTTCTCAACTTCCCACACTACACTGTCTCCAGAAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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| CDS-3UTR CAA 90 bp | AAGCTAATATTACTCCCACAAAATGGCAACATTGGGTCTCCTTATCATAAATGTCCTCCTCAAAAATTATaGGGAACAGACTCTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: KLILLPQNGNIGSPYHKCPPQKL*GTDSGA Trigger: TGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGG...ACATTTATGATAAGGAGACCCAATGTTGCCATTTTGTGGGAGTAATATTAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 |
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| CDS-3UTR CAA 90 bp | ATATCAGGCCAGCATGGTGCATGTAGGAAGAACTACCTACCTCAAACAAAATTTTTCAAAGTCTCCAGGTaGCAATTATTTATCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISGQHGACRKNYLPQTKFFKVSR*QLFICF Trigger: GAAGCAGATAAATAATTGCAACCTGGAGACTTTGAA...AAATTTTGTTTGAGGTAGGTAGTTCTTCCTACATGCACCATGCTGGCCTGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105753.8 |
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| CDS CCA 72 bp | GTGAAGGCCTCCTCAAAAATTATTGGGAACAGACTCTaGGGCAGGTCCGTGAGAGCAGAAATGGCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKASSKIIGNRL*GRSVRAEMAKA Trigger: GGCCTTGGCCATTTCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGGCCTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS TCA 72 bp | ACCCAGGACTGTTCTCAATTGGCTGCTTCTCTGTCGTaGACTCTGGTAAGCCTTCACCTTCATGGGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: TQDCSQLAASLS*TLVSLHLHGIQ Trigger: CTGGATCCCATGAAGGTGAAGGCTTACCAGAGTTCACGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS GCA 72 bp | TTCTTCACCTCACACCCAGGACTGTTCTCAATTGGCTaGTTCTCTGTCGTGAACTCTGGTAAGCCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: FFTSHPGLFSIG*FSVVNSGKPSP Trigger: AGGTGAAGGCTTACCAGAGTTCACGACAGAGAAGCAGCCAATTGAGAACAGTCCTGGGTGTGAGGTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS CCA 72 bp | TATATGTCCATCAGTGAAGGCCTCCTCAAAAATTATTaGGAACAGACTCTGGGGCAGGTCCGTGAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YMSISEGLLKNY*EQTLGQVRESR Trigger: TCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAATAATTTTTGAGGAGGCCTTCACTGATGGACATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS TCA 72 bp | GGTTCTGGAGGGTGGGTGGAGAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCATCCTGATCTGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: GSGGWVENRIPL*LLLKSHPDLDN Trigger: ATTGTCCAGATCAGGATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATTCTCCACCCACCCTCCAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 |
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| CDS GCA 72 bp | ATAGCCTTCAAAGTCTCCAGGTTGCAATTATTTATCTaGTTCCCTAAAGAAAGGTATGGGAAGGGCCACGCA | + |
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Preference number: 6 (lower is better) Translates to: IAFKVSRLQLFI*FPKERYGKGHA Trigger: TGCGTGGCCCTTCCCATACCTTTCTTTAGGGAAGCAGATAAATAATTGCAACCTGGAGACTTTGAAGGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000146836.2 ENSMUST00000147855.2 |
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| CDS TCA 72 bp | GTATCATGGCCTTCAAGATCCCTATATGTCCATCAGTaGAGGCCTCCTCAAAAATTATTGGGAACAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: VSWPSRSLYVHQ*RPPQKLLGTDS Trigger: AGAGTCTGTTCCCAATAATTTTTGAGGAGGCCTTCACTGATGGACATATAGGGATCTTGAAGGCCATGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105753.8 ENSMUST00000105754.8 ENSMUST00000105757.8 ENSMUST00000147855.2 |
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| CDS TCA 72 bp | GGTTCTGGAGGGTGGGTGGAGAATAGGATTCCTCTGTaGCTTCTTCTAAAGAGTCATCTTTATAAATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSGGWVENRIPL*LLLKSHLYKFG Trigger: GCCAAATTTATAAAGATGACTCTTTAGAAGAAGTCACAGAGGAATCCTATTCTCCACCCACCCTCCAGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147855.2 |
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| CDS TCA 72 bp | GGAGACAGTGTAGTGTGGGAAGTTGAGAAATCAAGCTaGATATTATCTCCTCATCAAGCTTTTCAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GDSVVWEVEKSS*ILSPHQAFQNH Trigger: GTGATTCTGAAAAGCTTGATGAGGAGATAATATTCAGCTTGATTTCTCAACTTCCCACACTACACTGTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105753.8 ENSMUST00000105755.2 ENSMUST00000105757.8 |
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