RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRAMEL23 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070617

Ensembl transcript IDs: ENSMUST00000073532.5

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TATTGTATGCAGTCCACAGAGGGGAACAATATCCTCATGGAAGGGTaGCTCTATTGTAACACACTCCACAACTACAAAAATTCTAGAGGA +
Preference number: 1 (lower is better)
Translates to: YCMQSTEGNNILMEG*LYCNTLHNYKNSRG
Trigger: TCCTCTAGAATTTTTGTAGTTGTGGAGTGTGTTACAATAGAGGCACCCTTCCATGAGGATATTGTTCCCCTCTGTGGACTGCATACAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
3UTR GCA 72 bp CAGTCCACAGAGGGGAACAATATCCTCATGGAAGGGTaGCTCTATTGTAACACACTCCACAACTACAAAAAT +
Preference number: 3 (lower is better)
Translates to: QSTEGNNILMEG*LYCNTLHNYKN
Trigger: ATTTTTGTAGTTGTGGAGTGTGTTACAATAGAGGCACCCTTCCATGAGGATATTGTTCCCCTCTGTGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
3UTR TCA 72 bp GAGGATCTTGCCTCTAGTGTGTCTCAGACATTTAGGTaGTTGATATATACATACTTTTTCCAGCAACATATA +
Preference number: 3 (lower is better)
Translates to: EDLASSVSQTFR*LIYTYFFQQHI
Trigger: TATATGTTGCTGGAAAAAGTATGTATATATCAATCACCTAAATGTCTGAGACACACTAGAGGCAAGATCCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp GACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTTATTGGGTAGGTCCTTaGGAGCAGAAATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DTFCRCNIRSPSHRRILPYWVGP*EQKWPR
Trigger: CCTTGGCCATTTCTGCTCTCAAGGACCTACCCAATA...AGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR GCA 90 bp ACATTTATTGTATGCAGTCCACAGAGGGGAACAATATCCTCATGGAAGGGTGCCACCCCACAGTCAGGCTaGTTCTGTTCCATGAACTCT +
Preference number: 4 (lower is better)
Translates to: TFIVCSPQRGTISSWKGATPQSG*FCSMNS
Trigger: AGAGTTCATGGAACAGAAGCAGCCTGACTGTGGGGT...GGCACCCTTCCATGAGGATATTGTTCCCCTCTGTGGACTGCATACAATAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CCA 90 bp ACATTTATTGTATGCAGTCCACAGAGGGGAACAATATCCTCATGGAAGGGTGCCAAGCCATCAAATTCATaGGACCCAGGCCATATTCCT +
Preference number: 4 (lower is better)
Translates to: TFIVCSPQRGTISSWKGAKPSNS*DPGHIP
Trigger: AGGAATATGGCCTGGGTCCCATGAATTTGATGGCTT...GGCACCCTTCCATGAGGATATTGTTCCCCTCTGTGGACTGCATACAATAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp TCACCATCTCACAGGAGGATCTTGCCTCTAGTGTGTCTCAGACATTTAGGTGATTGGAGTGTGGGAAGTTaGGATATCAATGTGATCACT +
Preference number: 4 (lower is better)
Translates to: SPSHRRILPLVCLRHLGDWSVGS*DINVIT
Trigger: AGTGATCACATTGATATCTCAACTTCCCACACTCCA...ATCACCTAAATGTCTGAGACACACTAGAGGCAAGATCCTCCTGTGAGATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp ACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTCTTCTCCCATTTCACATaGCTTCAATATCGGGCATTC +
Preference number: 4 (lower is better)
Translates to: TLFADATFVHHLTGGSCLFSHFT*LQYRAF
Trigger: GAATGCCCGATATTGAAGTCATGTGAAATGGGAGAA...GAGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp GACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTTTCAAGATCTTAGTATaGCCATTAATGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DTFCRCNIRSPSHRRILPFKILV*PLMKAS
Trigger: GGAGGCCTTCATTAATGGTCATACTAAGATCTTGAA...AGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp ATTGACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGGCTGCTTCTGTTCCATaGACTCTGATAAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: IDTFCRCNIRSPSHRRILAASVP*TLISHQ
Trigger: TTGATGGCTTATCAGAGTTCATGGAACAGAAGCAGC...CAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp GACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTGTTGAGATATCAATGTaGTCACTTTCTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: DTFCRCNIRSPSHRRILPVEISM*SLSPHQ
Trigger: TTGATGAGGAGAAAGTGATCACATTGATATCTCAAC...AGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR GCA 90 bp ACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTCTTGCACCTACTGGAATaGACCACTTTTGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: TLFADATFVHHLTGGSCLLHLLE*TTFEIS
Trigger: ACTTATTTCAAAAGTGGTGCATTCCAGTAGGTGCAA...GAGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR TCA 90 bp TGTAACACACTCCACAACTACAAAAATTCTAGAGGAGAAAGAGTGATTGACACTTCCATGAGTTTGAGATaGGTTATCACCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: CNTLHNYKNSRGERVIDTSMSLR*VITFNS
Trigger: AGAATTGAAGGTGATAACTCATCTCAAACTCATGGA...AGTGTCAATCACTCTTTCTCCTCTAGAATTTTTGTAGTTGTGGAGTGTGTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp ACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTCGCAAAGGTGACCTCCTaGGGCTGTCTTTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: TLFADATFVHHLTGGSCLAKVTS*GCLFGP
Trigger: AGGGCCAAAAAGACAGCCCAAGGAGGTCACCTTTGC...GAGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp GACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTATATTGGGTAGGTCCTaGAGAGCAGAAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: DTFCRCNIRSPSHRRILPILGRS*RAEMAK
Trigger: CTTGGCCATTTCTGCTCTCAAGGACCTACCCAATAT...AGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 90 bp TATGGGAAGGGCCACAAGGGTATCATGGCCTTCAAGATCTTAGTATaGCCATTAATGAAGGCCTCCTCAAACATCACTGGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: YGKGHKGIMAFKILV*PLMKASSNITGNSI
Trigger: TATGCTGTTCCCAGTGATGTTTGAGGAGGCCTTCATTAATGGTCATACTAAGATCTTGAAGGCCATGATACCCTTGTGGCCCTTCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 90 bp AAGTATGTAGCACATTCATCAAGGCTGCCCTCCATGAGTTTGAGATaGGTTATCACCTTCAATTCTTTCTTCACCCCACAGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KYVAHSSRLPSMSLR*VITFNSFFTPQSGC
Trigger: GCAGCCTGACTGTGGGGTGAAGAAAGAATTGAAGGTGATAACTCATCTCAAACTCATGGAGGGCAGCCTTGATGAATGTGCTACATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp ACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCCTCATTGACTTCTGTGAGTaGGCAACACTGACTTATGGC +
Preference number: 5 (lower is better)
Translates to: TLFADATFVHHLTGGSCLIDFCE*ATLTYG
Trigger: GCCATAAGTCAGTGTTGCCAACTCACAGAAGTCAAT...GAGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp TTGACACTTTTTGCAGATGCAACATTCGTTCACCATCTCACAGGAGGATCTTGCTTGATCTCTTTGAGTTaGCACCTACTGGAATGCACC +
Preference number: 5 (lower is better)
Translates to: LTLFADATFVHHLTGGSCLISLS*HLLECT
Trigger: GGTGCATTCCAGTAGGTGCAAACTCAAAGAGATCAA...GCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGCATCTGCAAAAAGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp TGTAACACACTCCACAACTACAAAAATTCTAGAGGAGAAAGAGTGATTGACACTCCTTGGGCTGTCTTTTaGGCCCTGAGTATATTCAGG +
Preference number: 5 (lower is better)
Translates to: CNTLHNYKNSRGERVIDTPWAVF*ALSIFR
Trigger: CCTGAATATACTCAGGGCCAAAAAGACAGCCCAAGG...AGTGTCAATCACTCTTTCTCCTCTAGAATTTTTGTAGTTGTGGAGTGTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp TTATCAATCCCCAATACTAAGCTTCCATTTCTACATTCCACAGTCAATCCAACAGAGTTTCTCGAGATGTaGGAGTGTGGGAAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LSIPNTKLPFLHSTVNPTEFLEM*ECGKLR
Trigger: TCTCAACTTCCCACACTCCAACATCTCGAGAAACTC...TGTTGGATTGACTGTGGAATGTAGAAATGGAAGCTTAGTATTGGGGATTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp TTATCAATCCCCAATACTAAGCTTCCATTTCTACATTCCACAGTCAATCCAACAGTTAGCTGGCTAAGCTaGGCTGTGTGGTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: LSIPNTKLPFLHSTVNPTVSWLS*AVWCRN
Trigger: ATTTCTACACCACACAGCCAAGCTTAGCCAGCTAAC...TGTTGGATTGACTGTGGAATGTAGAAATGGAAGCTTAGTATTGGGGATTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp TGTAACACACTCCACAACTACAAAAATTCTAGAGGAGAAAGAGTGATTGACACTCCCAGGCCATATTCCTaGCAAACCATAGTCTGTATT +
Preference number: 5 (lower is better)
Translates to: CNTLHNYKNSRGERVIDTPRPYS*QTIVCI
Trigger: AATACAGACTATGGTTTGCAAGGAATATGGCCTGGG...AGTGTCAATCACTCTTTCTCCTCTAGAATTTTTGTAGTTGTGGAGTGTGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp CCCAATACTAAGCTTCCATTTCTACATTCCACAGTCAATCCAACAGAAAGTATTTTGGAGTGTGGGAAGTaGAGATATCAATGTGATCAC +
Preference number: 5 (lower is better)
Translates to: PNTKLPFLHSTVNPTESILECGK*RYQCDH
Trigger: GTGATCACATTGATATCTCAACTTCCCACACTCCAA...AATACTTTCTGTTGGATTGACTGTGGAATGTAGAAATGGAAGCTTAGTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS-3UTR CAA 90 bp AATTCTAGAGGAGAAAGAGTGATTGACACTTTTTGCAGATGCAACATTCGTTCAAGGCATTCTTTCAGGTaGCCTTCTATAAAAGAGACA +
Preference number: 5 (lower is better)
Translates to: NSRGERVIDTFCRCNIRSRHSFR*PSIKET
Trigger: TGTCTCTTTTATAGAAGGCAACCTGAAAGAATGCCT...TGAACGAATGTTGCATCTGCAAAAAGTGTCAATCACTCTTTCTCCTCTAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 90 bp CCATTTGATCTCTTTGAGTTTGCACCTACTGGAATGCACCACTTTTaGAATAAGTATATCTATTTCCTGAAGAACAGCCTTCAATGTATC +
Preference number: 5 (lower is better)
Translates to: PFDLFEFAPTGMHHF*NKYIYFLKNSLQCI
Trigger: GATACATTGAAGGCTGTTCTTCAGGAAATAGATATACTTATTTCAAAAGTGGTGCATTCCAGTAGGTGCAAACTCAAAGAGATCAAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 72 bp ATGAAGGCCTCCTCAAACATCACTGGGAACAGCATATaGGGTAGGTCCTTGAGAGCAGAAATGGCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: MKASSNITGNSI*GRSLRAEMAKA
Trigger: GGCCTTGGCCATTTCTGCTCTCAAGGACCTACCCAATATGCTGTTCCCAGTGATGTTTGAGGAGGCCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 72 bp GGCCACAAGGGTATCATGGCCTTCAAGATCTTAGTATaGCCATTAATGAAGGCCTCCTCAAACATCACTGGG +
Preference number: 6 (lower is better)
Translates to: GHKGIMAFKILV*PLMKASSNITG
Trigger: CCCAGTGATGTTTGAGGAGGCCTTCATTAATGGTCATACTAAGATCTTGAAGGCCATGATACCCTTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 72 bp GCACATTCATCAAGGCTGCCCTCCATGAGTTTGAGATaGGTTATCACCTTCAATTCTTTCTTCACCCCACAG +
Preference number: 6 (lower is better)
Translates to: AHSSRLPSMSLR*VITFNSFFTPQ
Trigger: CTGTGGGGTGAAGAAAGAATTGAAGGTGATAACTCATCTCAAACTCATGGAGGGCAGCCTTGATGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 72 bp GTTGGCAACACTGACTTATGGCAGGCAGTAGGCTGTTaGACTGAGATTCTCCCATTTCACATGACTTCAATA +
Preference number: 6 (lower is better)
Translates to: VGNTDLWQAVGC*TEILPFHMTSI
Trigger: TATTGAAGTCATGTGAAATGGGAGAATCTCAGTTCAACAGCCTACTGCCTGCCATAAGTCAGTGTTGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 72 bp AGCCCTGAATCTTCAGCTTTCTACAGCATAGATGAATaGAATCTTTTCTCTGCTGGGCCCACTGCAACAAGT +
Preference number: 6 (lower is better)
Translates to: SPESSAFYSIDE*NLFSAGPTATS
Trigger: ACTTGTTGCAGTGGGCCCAGCAGAGAAAAGATTCAATTCATCTATGCTGTAGAAAGCTGAAGATTCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS GCA 72 bp ATCACCTTCAATTCTTTCTTCACCCCACAGTCAGGCTaGTTCTGTTCCATGAACTCTGATAAGCCATCAAAT +
Preference number: 6 (lower is better)
Translates to: ITFNSFFTPQSG*FCSMNSDKPSN
Trigger: ATTTGATGGCTTATCAGAGTTCATGGAACAGAAGCAGCCTGACTGTGGGGTGAAGAAAGAATTGAAGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 72 bp AGCTCCAGCTCTTGTATACAGTCTGCATGTACAATTTaGAAGATTTCTATAACTGTGGCGTTGATTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SSSSCIQSACTI*KISITVALIEP
Trigger: GGGCTCAATCAACGCCACAGTTATAGAAATCTTCAAAATTGTACATGCAGACTGTATACAAGAGCTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 90 bp AGTATCTCCAAGGTCTTTTTCAGGCACCTGAGGCATTCTTTCAGGTaGCCTTCTATAAAAGAGACATCATTTATACAGAGTTTCTCGAGA +
Preference number: 6 (lower is better)
Translates to: SISKVFFRHLRHSFR*PSIKETSFIQSFSR
Trigger: TCTCGAGAAACTCTGTATAAATGATGTCTCTTTTATAGAAGGCAACCTGAAAGAATGCCTCAGGTGCCTGAAAAAGACCTTGGAGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 90 bp GCCTTCTATAAAAGAGACATCATTTATACAGAGTTTCTCGAGATGTaGGAGTGTGGGAAGTTGAGATATCAATGTGATCACTTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: AFYKRDIIYTEFLEM*ECGKLRYQCDHFLL
Trigger: GAGGAGAAAGTGATCACATTGATATCTCAACTTCCCACACTCCAACATCTCGAGAAACTCTGTATAAATGATGTCTCTTTTATAGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS TCA 72 bp ATACAGAGTTTCTCGAGATGTTGGAGTGTGGGAAGTTaGGATATCAATGTGATCACTTTCTCCTCATCAATA +
Preference number: 6 (lower is better)
Translates to: IQSFSRCWSVGS*DINVITFSSSI
Trigger: TATTGATGAGGAGAAAGTGATCACATTGATATCTCAACTTCCCACACTCCAACATCTCGAGAAACTCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 72 bp TATACAGAGTTTCTCGAGATGTTGGAGTGTGGGAAGTaGAGATATCAATGTGATCACTTTCTCCTCATCAAT +
Preference number: 6 (lower is better)
Translates to: YTEFLEMLECGK*RYQCDHFLLIN
Trigger: ATTGATGAGGAGAAAGTGATCACATTGATATCTCAACTTCCCACACTCCAACATCTCGAGAAACTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5
CDS CAA 72 bp AAGGTCTTTTTCAGGCACCTGAGGCATTCTTTCAGGTaGCCTTCTATAAAAGAGACATCATTTATACAGAGT +
Preference number: 6 (lower is better)
Translates to: KVFFRHLRHSFR*PSIKETSFIQS
Trigger: ACTCTGTATAAATGATGTCTCTTTTATAGAAGGCAACCTGAAAGAATGCCTCAGGTGCCTGAAAAAGACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073532.5