RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRAMEL19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070890

Ensembl transcript IDs: ENSMUST00000052027.8

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTTTACTATCTCTGTGTGTCTGCTATTGAAGGCCTTTATGAACAGTaGTGGGAAGAGCGTGATGGGCAGGTCCTCCAGATCAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LYYLCVSAIEGLYEQ*WEERDGQVLQIREV
Trigger: GACTTCTCTGATCTGGAGGACCTGCCCATCACGCTCTTCCCACCACTGTTCATAAAGGCCTTCAATAGCAGACACACAGAGATAGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS GCA 90 bp GAGGGGCAGGGTACTGCTCCACACACAACTTACTTAGATTGGCCATaGATTTCAGAAGGTCTTTCAGTACAAGATTGGAGAAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: EGQGTAPHTTYLDWP*ISEGLSVQDWRSHC
Trigger: ACAATGACTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACCCTGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 90 bp ACTCTAGAGGGGCAGGGTACTGCTCCACACACAACTTACTTAGATTaGCCATGCATTTCAGAAGGTCTTTCAGTACAAGATTGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: TLEGQGTAPHTTYLD*PCISEGLSVQDWRS
Trigger: ACTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACCCTGCCCCTCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS TCA 90 bp ACCTGGAAAAGTAGTCACCATTCATGGAGAGATGCTGGAGACACTTaGGTTTGGAGAATTGAGAAAGGAATTTGGCAGCACCTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: TWKSSHHSWRDAGDT*VWRIEKGIWQHLFL
Trigger: TAAAAAGAGGTGCTGCCAAATTCCTTTCTCAATTCTCCAAACTCAAGTGTCTCCAGCATCTCTCCATGAATGGTGACTACTTTTCCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS TCA 90 bp GGCAGCACCTCTTTTTACCTCTGCAAACCTATACACACCACTACCTaGCATCAAGTATATTTGACATACATGGAATCTGAGAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: GSTSFYLCKPIHTTT*HQVYLTYMESEKIS
Trigger: AGAAATCTTCTCAGATTCCATGTATGTCAAATATACTTGATGTCAGGTAGTGGTGTGTATAGGTTTGCAGAGGTAAAAAGAGGTGCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS GCA 72 bp GAAGTCTATGGAATCCTTCTTCACCACCTCGTCCAGTaGCAGCTGCAGGAGTGTGGGAGGGTTGTAGGTGCT +
Preference number: 6 (lower is better)
Translates to: EVYGILLHHLVQ*QLQECGRVVGA
Trigger: AGCACCTACAACCCTCCCACACTCCTGCAGCTGGCACTGGACGAGGTGGTGAAGAAGGATTCCATAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 72 bp CTCTGTGTGTCTGCTATTGAAGGCCTTTATGAACAGTaGTGGGAAGAGCGTGATGGGCAGGTCCTCCAGATC +
Preference number: 6 (lower is better)
Translates to: LCVSAIEGLYEQ*WEERDGQVLQI
Trigger: GATCTGGAGGACCTGCCCATCACGCTCTTCCCACCACTGTTCATAAAGGCCTTCAATAGCAGACACACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 72 bp CAGTCTGACATGTGTTTGAAGTCTGACTTTGAGAGTTaGCAGCGATTCATAGACAAGGACTCCAAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: QSDMCLKSDFES*QRFIDKDSKGL
Trigger: GAGCCCCTTGGAGTCCTTGTCTATGAATCGCTGCCAACTCTCAAAGTCAGACTTCAAACACATGTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp CACTCTAGAGGGGCAGGGTACTGCTCCACACACAACTTACTTAGATaGGCCATGCATTTCAGAAGGTCTTTCAGTACAAGATTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: HSRGAGYCSTHNLLR*AMHFRRSFSTRLEK
Trigger: CTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACCCTGCCCCTCTAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp GGGGCAGGGTACTGCTCCACACACAACTTACTTAGATaGGCCATGCATTTCAGAAGGTCTTTCAGTACAAGA +
Preference number: 6 (lower is better)
Translates to: GAGYCSTHNLLR*AMHFRRSFSTR
Trigger: TCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACCCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp GCCATGCATTTCAGAAGGTCTTTCAGTACAAGATTGGAGAAGTCATaGTCACAGAAATTGACCATGGTGAGTTGTGAGCACTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: AMHFRRSFSTRLEKS*SQKLTMVSCEHWLR
Trigger: CCTGAGCCAGTGCTCACAACTCACCATGGTCAATTTCTGTGACAATGACTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp GGGCTGCCTTTTGGCTATAAGTATATCCATGAGGTCAGAACACAGTaGGACAAATTCCTCTACCACAACATTACGCCGGTGATCATAGCA +
Preference number: 6 (lower is better)
Translates to: GLPFGYKYIHEVRTQ*DKFLYHNITPVIIA
Trigger: TGCTATGATCACCGGCGTAATGTTGTGGTAGAGGAATTTGTCCAACTGTGTTCTGACCTCATGGATATACTTATAGCCAAAAGGCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 72 bp TTTGAAATTGGCTCCTTTATCCCTTCATCTGCTGAGTaGACTCCATCGTTTTTCCCAGTCCATACATCCCAG +
Preference number: 6 (lower is better)
Translates to: FEIGSFIPSSAE*TPSFFPVHTSQ
Trigger: CTGGGATGTATGGACTGGGAAAAACGATGGAGTCCACTCAGCAGATGAAGGGATAAAGGAGCCAATTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 72 bp GGGCAGGGTACTGCTCCACACACAACTTACTTAGATTaGCCATGCATTTCAGAAGGTCTTTCAGTACAAGAT +
Preference number: 6 (lower is better)
Translates to: GQGTAPHTTYLD*PCISEGLSVQD
Trigger: ATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp CCAGAAATCCTGGTGCACATCTCTCATATCCACGACTaGAAGCTTCCTTCTGAGACTAACATTCTGTGTCAG +
Preference number: 6 (lower is better)
Translates to: PEILVHISHIHD*KLPSETNILCQ
Trigger: CTGACACAGAATGTTAGTCTCAGAAGGAAGCTTCAAGTCGTGGATATGAGAGATGTGCACCAGGATTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp CCATACATCCCAGAAATCCTGGTGCACATCTCTCATATCCACGACTaGAAGCTTCCTTCTGAGACTAACATTCTGTGTCAGCAGTATATC +
Preference number: 6 (lower is better)
Translates to: PYIPEILVHISHIHD*KLPSETNILCQQYI
Trigger: GATATACTGCTGACACAGAATGTTAGTCTCAGAAGGAAGCTTCAAGTCGTGGATATGAGAGATGTGCACCAGGATTTCTGGGATGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp GTCACCATTCATGGAGAGATGCTGGAGACACTTGAGTTTGGAGAATaGAGAAAGGAATTTGGCAGCACCTCTTTTTACCTCTGCAAACCT +
Preference number: 6 (lower is better)
Translates to: VTIHGEMLETLEFGE*RKEFGSTSFYLCKP
Trigger: AGGTTTGCAGAGGTAAAAAGAGGTGCTGCCAAATTCCTTTCTCAATTCTCCAAACTCAAGTGTCTCCAGCATCTCTCCATGAATGGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CCA 72 bp TTCAGACAGCATAGCCTCACATACTCATTTCTCTGTTaGGCCCATTGTAGAAAGCATCTTTGGTGTGTGTTC +
Preference number: 6 (lower is better)
Translates to: FRQHSLTYSFLC*AHCRKHLWCVF
Trigger: GAACACACACCAAAGATGCTTTCTACAATGGGCCCAACAGAGAAATGAGTATGTGAGGCTATGCTGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp CATGGAGAGATGCTGGAGACACTTGAGTTTGGAGAATaGAGAAAGGAATTTGGCAGCACCTCTTTTTACCTC +
Preference number: 6 (lower is better)
Translates to: HGEMLETLEFGE*RKEFGSTSFYL
Trigger: GAGGTAAAAAGAGGTGCTGCCAAATTCCTTTCTCAATTCTCCAAACTCAAGTGTCTCCAGCATCTCTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS GCA 72 bp GGTACTGCTCCACACACAACTTACTTAGATTGGCCATaGATTTCAGAAGGTCTTTCAGTACAAGATTGGAGA +
Preference number: 6 (lower is better)
Translates to: GTAPHTTYLDWP*ISEGLSVQDWR
Trigger: TCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAAGTTGTGTGTGGAGCAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp TTTGGCTATAAGTATATCCATGAGGTCAGAACACAGTaGGACAAATTCCTCTACCACAACATTACGCCGGTG +
Preference number: 6 (lower is better)
Translates to: FGYKYIHEVRTQ*DKFLYHNITPV
Trigger: CACCGGCGTAATGTTGTGGTAGAGGAATTTGTCCAACTGTGTTCTGACCTCATGGATATACTTATAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp GTGTCTGTAGCAAAGATGATTGTCTTGGGCTGCCTTTaGGCTATAAGTATATCCATGAGGTCAGAACACAGT +
Preference number: 6 (lower is better)
Translates to: VSVAKMIVLGCL*AISISMRSEHS
Trigger: ACTGTGTTCTGACCTCATGGATATACTTATAGCCAAAAGGCAGCCCAAGACAATCATCTTTGCTACAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp TTCAGAAGGTCTTTCAGTACAAGATTGGAGAAGTCATaGTCACAGAAATTGACCATGGTGAGTTGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: FRRSFSTRLEKS*SQKLTMVSCEH
Trigger: GTGCTCACAACTCACCATGGTCAATTTCTGTGACAATGACTTCTCCAATCTTGTACTGAAAGACCTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp TTGGCCATGCATTTCAGAAGGTCTTTCAGTACAAGATaGGAGAAGTCATTGTCACAGAAATTGACCATGGTG +
Preference number: 6 (lower is better)
Translates to: LAMHFRRSFSTR*EKSLSQKLTMV
Trigger: CACCATGGTCAATTTCTGTGACAATGACTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp GTCTGCAGAGTTTCAGATACATTCTTTAGGAGAATTTGGAGACTCTaGAAACCTGACTTGGGAAACTCTACACCATGGAATTGCAGATGT +
Preference number: 6 (lower is better)
Translates to: VCRVSDTFFRRIWRL*KPDLGNSTPWNCRC
Trigger: ACATCTGCAATTCCATGGTGTAGAGTTTCCCAAGTCAGGTTTCAAGAGTCTCCAAATTCTCCTAAAGAATGTATCTGAAACTCTGCAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 90 bp TTACTTAGATTGGCCATGCATTTCAGAAGGTCTTTCAGTACAAGATaGGAGAAGTCATTGTCACAGAAATTGACCATGGTGAGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: LLRLAMHFRRSFSTR*EKSLSQKLTMVSCE
Trigger: CTCACAACTCACCATGGTCAATTTCTGTGACAATGACTTCTCCAATCTTGTACTGAAAGACCTTCTGAAATGCATGGCCAATCTAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS CAA 72 bp AAGGGGCAAAGCAACTTAGAAAGGGTAGGACCTGATTaGTGTATATTTCCAATTCCTCAATATAGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: KGQSNLERVGPD*CIFPIPQYSLG
Trigger: ACCCAAACTATATTGAGGAATTGGAAATATACACAAATCAGGTCCTACCCTTTCTAAGTTGCTTTGCCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8
CDS TCA 72 bp AACCTATACACACCACTACCTGACATCAAGTATATTTaGCATACATGGAATCTGAGAAGATTTCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: NLYTPLPDIKYI*HTWNLRRFLIW
Trigger: CCAGATGAGAAATCTTCTCAGATTCCATGTATGTCAAATATACTTGATGTCAGGTAGTGGTGTGTATAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052027.8