Pregenerated sensors for PRAMEL17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035201Ensembl transcript IDs: ENSMUST00000084386.6, ENSMUST00000106919.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTaGGGTCTCTGGACACTGAACATTTTGATTCCAATGCATCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PQDTFILLFFMSSHS*GLWTLNILIPMHPK Trigger: CTTTGGATGCATTGGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR TCA 90 bp | GGTCTCTGGACACTGAACATTTTGATTCCAATGCATCCAAAGCCTTaGATTCTGGGACTCTGTGATGAATGTACTTTCTTAGATTTCATT | + |
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Preference number: 1 (lower is better) Translates to: GLWTLNILIPMHPKP*ILGLCDECTFLDFI Trigger: AATGAAATCTAAGAAAGTACATTCATCACAGAGTCCCAGAATTCAAGGCTTTGGATGCATTGGAATCAAAATGTTCAGTGTCCAGAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATATGTCAAGTCACTCCTaGGGTCTCTGGACACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: GDPVLMEAHLEMLYCLSDMSSHS*GLWTLN Trigger: GTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACAT...ATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR-3UTR TCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACATGCATCCAAAGCCTTaGATTCTGGGACTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RHVYPIILHVKSLLRSLDMHPKP*ILGLCD Trigger: ATCACAGAGTCCCAGAATTCAAGGCTTTGGATGCAT...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCATGCATCCAAAGCCTTaGATTCTGGGACTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LYCLSDSTRHVYPIILHVMHPKP*ILGLCD Trigger: ATCACAGAGTCCCAGAATTCAAGGCTTTGGATGCAT...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTTGGACACTGAACATTTaGATTCCAATGCATCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: MEAHLEMLYCLSDSTRHVWTLNI*IPMHPK Trigger: CTTTGGATGCATTGGAATCAAAATGTTCAGTGTCCA...AACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR TCA 72 bp | ACACTGAACATTTTGATTCCAATGCATCCAAAGCCTTaGATTCTGGGACTCTGTGATGAATGTACTTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: TLNILIPMHPKP*ILGLCDECTFL Trigger: TAAGAAAGTACATTCATCACAGAGTCCCAGAATTCAAGGCTTTGGATGCATTGGAATCAAAATGTTCAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| 3UTR TCA 72 bp | GATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTaGTTCCACAAGACACGTTTATCCTATTATTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DGGTFRNAVLSF*FHKTRLSYYSS Trigger: TGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ACTGGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTCAGCACCCCGTCCAGTaGGAGCTGCAGGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TGDPVLMEAHLEMLYCLSQHPVQ*ELQECG Trigger: CCCACACTCCTGCAGCTCGCACTGGACGGGGTGCTG...AGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCCAGCACCCCGTCCAGTaGGAGCTGCAGGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSQHPVQ*ELQECG Trigger: CCCACACTCCTGCAGCTCGCACTGGACGGGGTGCTG...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | AAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGAAGCGGTTTTAAGCAGTaGCCCCACAGGGAGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KTRLSYYSSCQVTPEVSGSGFKQ*PHREAG Trigger: CCCTGCCTCCCTGTGGGGGCACTGCTTAAAACCGCT...TCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACCCATCCAGCACAGCTTaGAGCATTTCCACACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RHVYPIILHVKSLLRSLDPSSTA*SISTPA Trigger: CGCTGGTGTGGAAATGCTGCAAGCTGTGCTGGATGG...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCCTTTATGAAGAGTGGTaGGAAGAGCGTGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DPVLMEAHLEMLYCLSDSLYEEW*EERDGQ Trigger: CTGCCCATCACGCTCTTCCCACCACTCTTCATAAAG...GGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ATCATACATCTTGAGGTCATAGGACAGCAGGATCATAAACCTAAAACTGATGTCCCATCCAGCACAGCTTaGAGCATTTCCACACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: IIHLEVIGQQDHKPKTDVPSSTA*SISTPA Trigger: CGCTGGTGTGGAAATGCTGCAAGCTGTGCTGGATGG...GACATCAGTTTTAGGTTTATGATCCTGCTGTCCTATGACCTCAAGATGTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | GATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCTCAGCAGTATATCTATaGCATCCAGCACAGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: DPVLMEAHLEMLYCLSDSSAVYL*HPAQLA Trigger: TGCAAGCTGTGCTGGATGGCATAGATATACTGCTGA...GGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | GATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCTTTTGTTGGGCCCACTaGAGCAAGCATATTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: DPVLMEAHLEMLYCLSDSFCWAH*SKHIWC Trigger: ACACCAAATATGCTTGCTGCAGTGGGCCCAACAAAA...GGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | GTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGAGATCAGAGAAGTCTATaGAATCCTTCCTCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: VLMEAHLEMLYCLSDSTRDQRSL*NPSSAP Trigger: GGGTGCTGAGGAAGGATTCCATAGACTTCTCTGATC...TCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACTATCTGCTGGGCAGATaGCATTCTGTTTTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RHVYPIILHVKSLLRSLDYLLGR*HSVFQS Trigger: GGACTGGAAAACAGAATGCCATCTGCCCAGCAGATA...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCGTTAGGAAGGCCCTCTaGGACTTGCTTCTTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSVRKAL*DLLLDQ Trigger: TTGATCAAGAAGCAAGTCCCAGAGGGCCTTCCTAAC...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | ACTGGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTTTGAGTTGGGAGAACTaGGAAAAGAATTTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TGDPVLMEAHLEMLYCLSLSWEN*EKNLAA Trigger: TGCTGCCAAATTCTTTTCTCAGTTCTCCCAACTCAA...AGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACGGGAAAGGGCCAGGTTaGCACCATTTTCTTTACTAT | + |
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Preference number: 4 (lower is better) Translates to: RHVYPIILHVKSLLRSLDGKGPG*HHFLYY Trigger: ATAGTAAAGAAAATGGTGGCAACCTGGCCCTTTCCC...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATCTTTATGAAGAGTGGTaGGAAGAGCGTGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IILHVKSLLRSLDTEHFDLYEEW*EERDGQ Trigger: CTGCCCATCACGCTCTTCCCACCACTCTTCATAAAG...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | CACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTTTGACAAAGATGAGCTaGGAGCACTGGATCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HKTRLSYYSSCQVTPEVSLTKMS*EHWIKA Trigger: TGCCTTGATCCAGTGCTCCCAGCTCATCTTTGTCAA...AGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ACTGGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTAATGGCAAAGTCTGGTaGTGTTCAAGTCATAGACAC | + |
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Preference number: 4 (lower is better) Translates to: TGDPVLMEAHLEMLYCLSNGKVW*CSSHRH Trigger: GTGTCTATGACTTGAACACCACCAGACTTTGCCATT...AGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCTTGAGTTGGGAGAACTaGGAAAAGAATTTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSLSWEN*EKNLAA Trigger: TGCTGCCAAATTCTTTTCTCAGTTCTCCCAACTCAA...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | GGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATGACTCTTCAGGCATCTaGACAACTTTTTCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GDPVLMEAHLEMLYCLSDDSSGI*TTFSCC Trigger: ACAACATGAAAAAGTTGTTCAGATGCCTGAAGAGTC...ATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCGTCCAGAAATCCTGGTaGAAAAATCTCAAGTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSVQKSW*KNLKSN Trigger: GTTGGACTTGAGATTTTTGCACCAGGATTTCTGGAC...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | CACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGTCCAGAAATCCTGGTaGAAAAATCTCAAGTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: HVYPIILHVKSLLRSLDTVQKSW*KNLKSN Trigger: GTTGGACTTGAGATTTTTGCACCAGGATTTCTGGAC...AGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATGATCAGAGAAGTCTATaGAATCCTTCCTCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: IILHVKSLLRSLDTEHFDDQRSL*NPSSAP Trigger: GGGTGCTGAGGAAGGATTCCATAGACTTCTCTGATC...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | CACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTACAAGATTTCTCATCTaGCCAAGGAAATGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HVYPIILHVKSLLRSLDTTRFLI*PRKWAK Trigger: CTTTGCCCATTTCCTTGGCCAGATGAGAAATCTTGT...AGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTTGACAAAGATGAGCTaGGAGCACTGGATCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IILHVKSLLRSLDTEHFDLTKMS*EHWIKA Trigger: TGCCTTGATCCAGTGCTCCCAGCTCATCTTTGTCAA...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAGGACTGGAGAAGTaGTTGTCAAAGAAATTGACA | + |
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Preference number: 4 (lower is better) Translates to: DPVLMEAHLEMLYCLSDSTGLEK*LSKKLT Trigger: TGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGT...GGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | CACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTCCTTCAGTACAGGACTaGAGAAGTGGTTGTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: HKTRLSYYSSCQVTPEVSPSVQD*RSGCQR Trigger: TCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGG...AGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACAGCTCAGGACACAGTTaGAAAAATCTCTCCACCATA | + |
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Preference number: 4 (lower is better) Translates to: RHVYPIILHVKSLLRSLDSSGHS*KNLSTI Trigger: TATGGTGGAGAGATTTTTCCAACTGTGTCCTGAGCT...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | AGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACGACTCTTCAGGCATCTaGACAACTTTTTCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RHVYPIILHVKSLLRSLDDSSGI*TTFSCC Trigger: ACAACATGAAAAAGTTGTTCAGATGCCTGAAGAGTC...GTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | CACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAGACTCTTGAAATATaGCTTGGAAAACACTACACC | + |
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Preference number: 4 (lower is better) Translates to: HVYPIILHVKSLLRSLDTETLEI*LGKHYT Trigger: GGTGTAGTGTTTTCCAAGTCATATTTCAAGAGTCTC...AGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR TCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCGAACTCGGAGACTCTTaGAATATGACTTGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSELGDS*NMTWKT Trigger: TGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTC...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | AAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACTTGATCAAAATATCTaGTGGGCAGATGGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: KTRLSYYSSCQVTPEVSGLDQNI*WADGIL Trigger: CAGAATGCCATCTGCCCAGCAGATATTTTGATCAAG...TCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTTTTGTTGGGCCCACTaGAGCAAGCATATTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IILHVKSLLRSLDTEHFDFCWAH*SKHIWC Trigger: ACACCAAATATGCTTGCTGCAGTGGGCCCAACAAAA...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCGATCAAAATATCTGCTaGGCAGATGGCATTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSDQNIC*ADGILF Trigger: AAACAGAATGCCATCTGCCCAGCAGATATTTTGATC...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCGTTAGGAAGGCCCTCTaGGACTTGCTTCTTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: LYCLSDSTRHVYPIILHVVRKAL*DLLLDQ Trigger: TTGATCAAGAAGCAAGTCCCAGAGGGCCTTCCTAAC...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CCA 90 bp | AAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGAAGCTCAGGACACAGTTaGAAAAATCTCTCCACCATA | + |
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Preference number: 4 (lower is better) Translates to: KTRLSYYSSCQVTPEVSGSSGHS*KNLSTI Trigger: TATGGTGGAGAGATTTTTCCAACTGTGTCCTGAGCT...TCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCGGGAAAGGGCCAGGTTaGCACCATTTTCTTTACTAT | + |
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Preference number: 4 (lower is better) Translates to: LYCLSDSTRHVYPIILHVGKGPG*HHFLYY Trigger: ATAGTAAAGAAAATGGTGGCAACCTGGCCCTTTCCC...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR GCA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATCTTGATCAAAATATCTaGTGGGCAGATGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IILHVKSLLRSLDTEHFDLDQNI*WADGIL Trigger: CAGAATGCCATCTGCCCAGCAGATATTTTGATCAAG...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | CACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTTGCAGCAAGCATATTTaGTGTTCGTTTAGAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVYPIILHVKSLLRSLDTCSKHI*CSFRED Trigger: ATCTTCTCTAAACGAACACCAAATATGCTTGCTGCA...AGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATTCCACTGAGAAAAGAATTTaGCAGCACCTATCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILHVKSLLRSLDTEHFDSTEKRI*QHLSFH Trigger: ATGGAAAGATAGGTGCTGCCAAATTCTTTTCTCAGT...GGAATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTACAGGACTGGAGAAGTaGTTGTCAAAGAAATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: MEAHLEMLYCLSDSTRHVTGLEK*LSKKLT Trigger: TGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGT...AACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR TCA 90 bp | GCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTGAACTCGGAGACTCTTaGAATATGACTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: AHLEMLYCLSDSTRHVYPELGDS*NMTWKT Trigger: TGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTC...AGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCACAAGATTTCTCATCTaGCCAAGGAAATGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYCLSDSTRHVYPIILHVTRFLI*PRKWAK Trigger: CTTTGCCCATTTCCTTGGCCAGATGAGAAATCTTGT...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTACTGAGAAAAGAATTTaGCAGCACCTATCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MEAHLEMLYCLSDSTRHVTEKRI*QHLSFH Trigger: ATGGAAAGATAGGTGCTGCCAAATTCTTTTCTCAGT...AACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCACCTTCAGTACAGGACTaGAGAAGTGGTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTVFLIPQDTFILLFFMSPSVQD*RSGCQR Trigger: TCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGG...TGACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCAATGGCAAAGTCTGGTaGTGTTCAAGTCATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSDSTRHVYPIILHVKSLNGKVW*CSSHRH Trigger: GTGTCTATGACTTGAACACCACCAGACTTTGCCATT...GAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCGATCAAAATATCTGCTaGGCAGATGGCATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSTRHVYPIILHVKSLDQNIC*ADGILF Trigger: AAACAGAATGCCATCTGCCCAGCAGATATTTTGATC...GAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCATGCAGCAAGCATATTTaGTGTTCGTTTAGAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTVFLIPQDTFILLFFMSCSKHI*CSFRED Trigger: ATCTTCTCTAAACGAACACCAAATATGCTTGCTGCA...TGACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS CCA 90 bp | GTTAGGAAGGCCCTCTGGGACTTGCTTCTTGATCAAAATATCTGCTaGGCAGATGGCATTCTGTTTTCCAGTCCAGAAATCCTGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VRKALWDLLLDQNIC*ADGILFSSPEILVQ Trigger: TTGCACCAGGATTTCTGGACTGGAAAACAGAATGCCATCTGCCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGAGGGCCTTCCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS CCA 90 bp | TTAGCCATGCATCGCAGAAGGTCCTTCAGTACAGGACTGGAGAAGTaGTTGTCAAAGAAATTGACAAAGATGAGCTGGGAGCACTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LAMHRRRSFSTGLEK*LSKKLTKMSWEHWI Trigger: GATCCAGTGCTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGGACCTTCTGCGATGCATGGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS GCA 90 bp | ATAGTTAGGAAGGCCCTCTGGGACTTGCTTCTTGATCAAAATATCTaGTGGGCAGATGGCATTCTGTTTTCCAGTCCAGAAATCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IVRKALWDLLLDQNI*WADGILFSSPEILV Trigger: CACCAGGATTTCTGGACTGGAAAACAGAATGCCATCTGCCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGAGGGCCTTCCTAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS GCA 90 bp | AAACAATTAGGGCAGCAGACAGTAGCAAAGAAGATTTTCTTGGGCTaGCTTTTAGCCGTGAGTAGATCCATGAGCTCAGGACACAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQLGQQTVAKKIFLG*LLAVSRSMSSGHSW Trigger: CCAACTGTGTCCTGAGCTCATGGATCTACTCACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGCTACTGTCTGCTGCCCTAATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS TCA 90 bp | TTCTCATCTGGCCAAGGAAATGGGCAAAGAAACCTAGGAAGGACATaGCCTCTCGTGTGTGTATTTCCAAATCCACAATATAGGTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSGQGNGQRNLGRT*PLVCVFPNPQYRSA Trigger: AGCCGACCTATATTGTGGATTTGGAAATACACACACGAGAGGTCATGTCCTTCCTAGGTTTCTTTGCCCATTTCCTTGGCCAGATGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCCCAGGGTCTGTAGAGTaGCAGATACATTCTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DPVLMEAHLEMLYCLSDSPGSVE*QIHSLG Trigger: TCCTAGAGAATGTATCTGCAACTCTACAGACCCTGG...GGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | CACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTAGGGAAAGGGCCAGGTaGCCACCATTTTCTTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: HVYPIILHVKSLLRSLDTRERAR*PPFSLL Trigger: TAGTAAAGAAAATGGTGGCAACCTGGCCCTTTCCCT...AGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATCTGGAGATGGTTGAGTaGGGAGAACTGAGAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GDPVLMEAHLEMLYCLSDLEMVE*GELRKE Trigger: TTCTTTTCTCAGTTCTCCCAACTCAACCATCTCCAG...ATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGAGCAAAGAAGATTTTCTaGGGCTGCCTTTTAGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLMEAHLEMLYCLSDSTRAKKIF*GCLLAV Trigger: CACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGC...TCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATGGACTGGAGAAGTGGTaGTCAAAGAAATTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDPVLMEAHLEMLYCLSDGLEKW*SKKLTK Trigger: CTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCC...ATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTGAGCTCAGGACACAGTaGGAAAAATCTCTCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: MEAHLEMLYCLSDSTRHVELRTQ*EKSLHH Trigger: ATGGTGGAGAGATTTTTCCAACTGTGTCCTGAGCTC...AACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATAGGGAAAGGGCCAGGTaGCCACCATTTTCTTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: IILHVKSLLRSLDTEHFDRERAR*PPFSLL Trigger: TAGTAAAGAAAATGGTGGCAACCTGGCCCTTTCCCT...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | CACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTTCTGGGACTTGCTTCTaGATCAAAATATCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKTRLSYYSSCQVTPEVSSGTCF*IKISAG Trigger: CCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGA...AGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | CACAAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTCTGGAGATGGTTGAGTaGGGAGAACTGAGAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HKTRLSYYSSCQVTPEVSLEMVE*GELRKE Trigger: TTCTTTTCTCAGTTCTCCCAACTCAACCATCTCCAG...AGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTGATCCTGTCCTGATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTAGAACTCGGAGACTCTaGAAATATGACTTGGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGDPVLMEAHLEMLYCLSRTRRL*KYDLEN Trigger: GTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCT...AGAAAGACAGTACAGCATTTCTAAATGTGCCTCCATCAGGACAGGATCACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATCCAGGGTCTGTAGAGTaGCAGATACATTCTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IILHVKSLLRSLDTEHFDPGSVE*QIHSLG Trigger: TCCTAGAGAATGTATCTGCAACTCTACAGACCCTGG...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTGAGCTCAGGACACAGTaGGAAAAATCTCTCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHLEMLYCLSDSTRHVYPELRTQ*EKSLHH Trigger: ATGGTGGAGAGATTTTTCCAACTGTGTCCTGAGCTC...AGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | GCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTGCAAAGAAGATTTTCTaGGGCTGCCTTTTAGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AHLEMLYCLSDSTRHVYPAKKIF*GCLLAV Trigger: CACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGC...AGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS-3UTR CAA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATAAGGCCCTCTGGGACTaGCTTCTTGATCAAAATATC | + |
|
Preference number: 5 (lower is better) Translates to: IILHVKSLLRSLDTEHFDKALWD*LLDQNI Trigger: GATATTTTGATCAAGAAGCAAGTCCCAGAGGGCCTT...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCTCTGGGACTTGCTTCTaGATCAAAATATCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSDSTRHVYPIILHVSGTCF*IKISAG Trigger: CCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGA...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | AAGACACGTTTATCCTATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGAAGAACTCGGAGACTCTaGAAATATGACTTGGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KTRLSYYSSCQVTPEVSGRTRRL*KYDLEN Trigger: GTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCT...TCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAATAGGATAAACGTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | GCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTTGGTTGTCAAAGAAATaGACAAAGATGAGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHLEMLYCLSDSTRHVYPWLSKK*TKMSWE Trigger: CTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCA...AGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS TCA 90 bp | TCTGTAGAGTTGCAGATACATTCTCTAGGAGAACTCGGAGACTCTTaGAATATGACTTGGAAAACACTACACCCTTTAAGTATAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVELQIHSLGELGDS*NMTWKTLHPLSIGV Trigger: AACACCTATACTTAAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCTCCTAGAGAATGTATCTGCAACTCTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGCACATTTAGAAATGCTGTACTGTCTTTCTGATTCCACAAGACACGTTCTCTTGAAATATGACTaGGAAAACACTACACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MEAHLEMLYCLSDSTRHVLLKYD*ENTTPF Trigger: AAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAG...AACGTGTCTTGTGGAATCAGAAAGACAGTACAGCATTTCTAAATGTGCCTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCTGGTTGTCAAAGAAATaGACAAAGATGAGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSDSTRHVYPIILHVWLSKK*TKMSWE Trigger: CTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCA...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTTTCTGATTCCACAAGACACGTTTATCCTATTATTCTTCATGTCGGACTGGAGAAGTGGTaGTCAAAGAAATTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSDSTRHVYPIILHVGLEKW*SKKLTK Trigger: CTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCC...GACATGAAGAATAATAGGATAAACGTGTCTTGTGGAATCAGAAAGACAGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTTCATGTCAAGTCACTCCTGAGGTCTCTGGACACTGAACATTTTGATCTCTTGAAATATGACTaGGAAAACACTACACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IILHVKSLLRSLDTEHFDLLKYD*ENTTPF Trigger: AAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAG...ATCAAAATGTTCAGTGTCCAGAGACCTCAGGAGTGACTTGACATGAAGAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS GCA 72 bp | GAAGTCTATGGAATCCTTCCTCAGCACCCCGTCCAGTaGGAGCTGCAGGAGTGTGGGAGGGTTGTAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EVYGILPQHPVQ*ELQECGRVVGA Trigger: AGCACCTACAACCCTCCCACACTCCTGCAGCTCGCACTGGACGGGGTGCTGAGGAAGGATTCCATAGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS TCA 72 bp | GAGCACTGGATCAAGGCAGGCAAGAGGACTTTGAGGTaGGAGTCCTTCATCCTGCAGTGCTCTAACCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EHWIKAGKRTLR*ESFILQCSNPR Trigger: CCTGGGGTTAGAGCACTGCAGGATGAAGGACTCTCACCTCAAAGTCCTCTTGCCTGCCTTGATCCAGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS GCA 72 bp | TGTGTCAGCAGTATATCTATGCCATCCAGCACAGCTTaGAGCATTTCCACACCAGCGGTTTTAAGCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CVSSISMPSSTA*SISTPAVLSSA Trigger: GGCACTGCTTAAAACCGCTGGTGTGGAAATGCTGCAAGCTGTGCTGGATGGCATAGATATACTGCTGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS GCA 72 bp | GGGCAGCAGACAGTAGCAAAGAAGATTTTCTTGGGCTaGCTTTTAGCCGTGAGTAGATCCATGAGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GQQTVAKKIFLG*LLAVSRSMSSG Trigger: TCCTGAGCTCATGGATCTACTCACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGCTACTGTCTGCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS CAA 72 bp | TCATCCTGCAGTGCTCTAACCCCAGGGTCTGTAGAGTaGCAGATACATTCTCTAGGAGAACTCGGAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSALTPGSVE*QIHSLGELGDS Trigger: AGAGTCTCCGAGTTCTCCTAGAGAATGTATCTGCAACTCTACAGACCCTGGGGTTAGAGCACTGCAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS CAA 90 bp | GCCATGCATCGCAGAAGGTCCTTCAGTACAGGACTGGAGAAGTGGTaGTCAAAGAAATTGACAAAGATGAGCTGGGAGCACTGGATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AMHRRRSFSTGLEKW*SKKLTKMSWEHWIK Trigger: CTTGATCCAGTGCTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGGACCTTCTGCGATGCATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
||
| CDS CAA 72 bp | CGCAGAAGGTCCTTCAGTACAGGACTGGAGAAGTGGTaGTCAAAGAAATTGACAAAGATGAGCTGGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RRRSFSTGLEKW*SKKLTKMSWEH Trigger: GTGCTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGGACCTTCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 90 bp | CGTCTCAAACAATTAGGGCAGCAGACAGTAGCAAAGAAGATTTTCTaGGGCTGCCTTTTAGCCGTGAGTAGATCCATGAGCTCAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: RLKQLGQQTVAKKIF*GCLLAVSRSMSSGH Trigger: GTGTCCTGAGCTCATGGATCTACTCACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGCTACTGTCTGCTGCCCTAATTGTTTGAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS GCA 72 bp | AAGGCCCTCTGGGACTTGCTTCTTGATCAAAATATCTaGTGGGCAGATGGCATTCTGTTTTCCAGTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KALWDLLLDQNI*WADGILFSSPE Trigger: TTCTGGACTGGAAAACAGAATGCCATCTGCCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGAGGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CCA 72 bp | GCCCTCTGGGACTTGCTTCTTGATCAAAATATCTGCTaGGCAGATGGCATTCTGTTTTCCAGTCCAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: ALWDLLLDQNIC*ADGILFSSPEI Trigger: GATTTCTGGACTGGAAAACAGAATGCCATCTGCCCAGCAGATATTTTGATCAAGAAGCAAGTCCCAGAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CCA 72 bp | GAGAAGTGGTTGTCAAAGAAATTGACAAAGATGAGCTaGGAGCACTGGATCAAGGCAGGCAAGAGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: EKWLSKKLTKMS*EHWIKAGKRTL Trigger: CAAAGTCCTCTTGCCTGCCTTGATCCAGTGCTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCACTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CCA 72 bp | CATCGCAGAAGGTCCTTCAGTACAGGACTGGAGAAGTaGTTGTCAAAGAAATTGACAAAGATGAGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: HRRRSFSTGLEK*LSKKLTKMSWE Trigger: CTCCCAGCTCATCTTTGTCAATTTCTTTGACAACCACTTCTCCAGTCCTGTACTGAAGGACCTTCTGCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 72 bp | CAATTAGGGCAGCAGACAGTAGCAAAGAAGATTTTCTaGGGCTGCCTTTTAGCCGTGAGTAGATCCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: QLGQQTVAKKIF*GCLLAVSRSMS Trigger: GCTCATGGATCTACTCACGGCTAAAAGGCAGCCCAAGAAAATCTTCTTTGCTACTGTCTGCTGCCCTAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS TCA 72 bp | GGCCAAGGAAATGGGCAAAGAAACCTAGGAAGGACATaGCCTCTCGTGTGTGTATTTCCAAATCCACAATAT | + |
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Preference number: 6 (lower is better) Translates to: GQGNGQRNLGRT*PLVCVFPNPQY Trigger: ATATTGTGGATTTGGAAATACACACACGAGAGGTCATGTCCTTCCTAGGTTTCTTTGCCCATTTCCTTGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 72 bp | GGCACCATTCATATAGACATGCTGGAGATGGTTGAGTaGGGAGAACTGAGAAAAGAATTTGGCAGCACCTAT | + |
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Preference number: 6 (lower is better) Translates to: GTIHIDMLEMVE*GELRKEFGSTY Trigger: ATAGGTGCTGCCAAATTCTTTTCTCAGTTCTCCCAACTCAACCATCTCCAGCATGTCTATATGAATGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 90 bp | GGAAATGTAGGCACCATTCATATAGACATGCTGGAGATGGTTGAGTaGGGAGAACTGAGAAAAGAATTTGGCAGCACCTATCTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: GNVGTIHIDMLEMVE*GELRKEFGSTYLSI Trigger: GATGGAAAGATAGGTGCTGCCAAATTCTTTTCTCAGTTCTCCCAACTCAACCATCTCCAGCATGTCTATATGAATGGTGCCTACATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 90 bp | GTCTGTAGAGTTGCAGATACATTCTCTAGGAGAACTCGGAGACTCTaGAAATATGACTTGGAAAACACTACACCCTTTAAGTATAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: VCRVADTFSRRTRRL*KYDLENTTPFKYRC Trigger: ACACCTATACTTAAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCTCCTAGAGAATGTATCTGCAACTCTACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS CAA 72 bp | GTTGCAGATACATTCTCTAGGAGAACTCGGAGACTCTaGAAATATGACTTGGAAAACACTACACCCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VADTFSRRTRRL*KYDLENTTPFK Trigger: CTTAAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCTCCTAGAGAATGTATCTGCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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| CDS TCA 72 bp | TTGCAGATACATTCTCTAGGAGAACTCGGAGACTCTTaGAATATGACTTGGAAAACACTACACCCTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LQIHSLGELGDS*NMTWKTLHPLS Trigger: ACTTAAAGGGTGTAGTGTTTTCCAAGTCATATTTCAAGAGTCTCCGAGTTCTCCTAGAGAATGTATCTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084386.6 ENSMUST00000106919.8 |
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