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Pregenerated sensors for PRAMEL15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073721

Ensembl transcript IDs: ENSMUST00000121109.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TCTAGGTGTCCCTCAAGGAAGCAGACAGCATCTAGATGCAGCTTCTaGAGGCTCTCCAGCTTAAGGATCTGCAAGGTGAACCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: SRCPSRKQTASRCSF*RLSSLRICKVNLVM
Trigger: CATCACCAGGTTCACCTTGCAGATCCTTAAGCTGGAGAGCCTCCAGAAGCTGCATCTAGATGCTGTCTGCTTCCTTGAGGGACACCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS TCA 90 bp CCCACAGACCGTAAATCCAGCACTTCTAGTTTGTACTCCCTGGGGTaGACCTCCTGGATAAGCAGCTTATCAACCTCCTCTAAGACAACT +
Preference number: 5 (lower is better)
Translates to: PTDRKSSTSSLYSLG*TSWISSLSTSSKTT
Trigger: AGTTGTCTTAGAGGAGGTTGATAAGCTGCTTATCCAGGAGGTTCACCCCAGGGAGTACAAACTAGAAGTGCTGGATTTACGGTCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS TCA 90 bp TCAACAGTTGTGGTAAGAATAGTTCAGGTAAGTACTGCAAAGCGCTaGTGGCCAAAGCCTCATTCCTCAGAATGTTCTGGGCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: STVVVRIVQVSTAKR*WPKPHSSECSGLPA
Trigger: AGCTGGCAGCCCAGAACATTCTGAGGAATGAGGCTTTGGCCATCAGCGCTTTGCAGTACTTACCTGAACTATTCTTACCACAACTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS CCA 72 bp GCGCTGATGGCCAAAGCCTCATTCCTCAGAATGTTCTaGGCTGCCAGCTCTTGGAGTGTGAGTAAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: ALMAKASFLRMF*AASSWSVSKGL
Trigger: CAAGCCCTTACTCACACTCCAAGAGCTGGCAGCCCAGAACATTCTGAGGAATGAGGCTTTGGCCATCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS GCA 72 bp TCTAGGTGTCCCTCAAGGAAGCAGACAGCATCTAGATaGAGCTTCTGGAGGCTCTCCAGCTTAAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SRCPSRKQTASR*SFWRLSSLRIC
Trigger: GCAGATCCTTAAGCTGGAGAGCCTCCAGAAGCTGCATCTAGATGCTGTCTGCTTCCTTGAGGGACACCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS TCA 72 bp CGAGGTAGGAGAACAGCCTACTCTGGCCTCTATTGTTaGGCTGCAAGTCCACTAGTACTTTCAAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RGRRTAYSGLYC*AASPLVLSRAV
Trigger: CACAGCCCTTGAAAGTACTAGTGGACTTGCAGCTCAACAATAGAGGCCAGAGTAGGCTGTTCTCCTACCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS GCA 72 bp AGATGCAGCTTCTGGAGGCTCTCCAGCTTAAGGATCTaGAAGGTGAACCTGGTGATGATACACCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RCSFWRLSSLRI*KVNLVMIHLLF
Trigger: GAAGAGGAGGTGTATCATCACCAGGTTCACCTTGCAGATCCTTAAGCTGGAGAGCCTCCAGAAGCTGCATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS CCA 72 bp GAACAGGGTATAGCTCCAGCCTTAGATGTATCAAGCTaGCAGTGTGGTGTAGTAGGTCCTTCATGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: EQGIAPALDVSS*QCGVVGPSWQA
Trigger: TGCTTGCCATGAAGGACCTACTACACCACACTGCCAGCTTGATACATCTAAGGCTGGAGCTATACCCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS CCA 72 bp GATCTGTTTGAGTGGTCTTGGGTAACCAGTCATCCATaGCCCCAGGCCACACATTCAAATAGTTTTGTCCCA +
Preference number: 6 (lower is better)
Translates to: DLFEWSWVTSHP*PQATHSNSFVP
Trigger: TGGGACAAAACTATTTGAATGTGTGGCCTGGGGCCATGGATGACTGGTTACCCAAGACCACTCAAACAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS TCA 72 bp GTGGTAAGAATAGTTCAGGTAAGTACTGCAAAGCGCTaGTGGCCAAAGCCTCATTCCTCAGAATGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: VVRIVQVSTAKR*WPKPHSSECSG
Trigger: CCCAGAACATTCTGAGGAATGAGGCTTTGGCCATCAGCGCTTTGCAGTACTTACCTGAACTATTCTTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS TCA 72 bp TGTGTCATTACTGTCTTAGAACAGCAAGGATCTGTTTaGGTGGTCTTGGGTAACCAGTCATCCATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: CVITVLEQQGSV*VVLGNQSSMAP
Trigger: TGGGGCCATGGATGACTGGTTACCCAAGACCACTCAAACAGATCCTTGCTGTTCTAAGACAGTAATGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS GCA 72 bp TTCAACAGTTGTGGTAAGAATAGTTCAGGTAAGTACTaGAAAGCGCTGATGGCCAAAGCCTCATTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: FNSCGKNSSGKY*KALMAKASFLR
Trigger: TCTGAGGAATGAGGCTTTGGCCATCAGCGCTTTGCAGTACTTACCTGAACTATTCTTACCACAACTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2
CDS CAA 72 bp GATGTTGGAGAGAGCAAGTTTACGCAAGTTCCTCATTaGGCGCAAGTAAGGAGCAAAGTTAAGCAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: DVGESKFTQVPH*AQVRSKVKQEG
Trigger: TCCTTCTTGCTTAACTTTGCTCCTTACTTGCGCCAAATGAGGAACTTGCGTAAACTTGCTCTCTCCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121109.2