Pregenerated sensors for PRAMEL14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078509Ensembl transcript IDs: ENSMUST00000105762.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCATCATACTGAGAAATGACCAAAACCATGTGTTCTGGGCCCTCTaGACAAGAGACCAGTCCCTAGGAATTCATTTCTTAGTACACAGG | + |
|
Preference number: 1 (lower is better) Translates to: CIILRNDQNHVFWAL*TRDQSLGIHFLVHR Trigger: CCTGTGTACTAAGAAATGAATTCCTAGGGACTGGTCTCTTGTCCAGAGGGCCCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| 3UTR CCA 90 bp | ACCATTGTTTGCATCATACTGAGAAATGACCAAAACCATGTGTTCTaGGCCCTCTGGACAAGAGACCAGTCCCTAGGAATTCATTTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: TIVCIILRNDQNHVF*ALWTRDQSLGIHFL Trigger: TAAGAAATGAATTCCTAGGGACTGGTCTCTTGTCCAGAGGGCCCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCAAACAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACAATGGCTTCATAATTAGGAGAAAGCCAGTGAAGAAGACTGTCCTGACACAAAACCATGTGTTCTaGGCCCTCTGGACAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SDNGFIIRRKPVKKTVLTQNHVF*ALWTRD Trigger: GTCTCTTGTCCAGAGGGCCCAGAACACATGGTTTTG...TGTCAGGACAGTCTTCTTCACTGGCTTTCTCCTAATTATGAAGCCATTGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGAGAACCAATTAATTGAGCATACCACAGAGAGAATATCAGGTTCTCAGGATTTGTTTGCATCATACTaGGAAATGACCAAAACCATG | + |
|
Preference number: 2 (lower is better) Translates to: LENQLIEHTTERISGSQDLFASY*EMTKTM Trigger: CATGGTTTTGGTCATTTCTCAGTATGATGCAAACAA...ATCCTGAGAACCTGATATTCTCTCTGTGGTATGCTCAATTAATTGGTTCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCAAAGAACTGTCCTAACTATAATCTTGAGAACCAATTAATTGAGCATACCGTCCTGACAGGAGTTTaGACCATTGTTTGCATCATA | + |
|
Preference number: 2 (lower is better) Translates to: QSKNCPNYNLENQLIEHTVLTGV*TIVCII Trigger: TATGATGCAAACAATGGTCCAAACTCCTGTCAGGAC...GGTATGCTCAATTAATTGGTTCTCAAGATTATAGTTAGGACAGTTCTTTGACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | ACAACACAGTATCCCTCCATCTCTGTGTACAGTCAAAGAACTGTCCTAACTATACCAGCTGCAGGAGTGTaGGTGGGGCTTCCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTQYPSISVYSQRTVLTIPAAGV*VGLPSP Trigger: TGGACTTGGAAGCCCCACCCACACTCCTGCAGCTGG...TATAGTTAGGACAGTTCTTTGACTGTACACAGAGATGGAGGGATACTGTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGGACCATTGTTTGCATCATACTGAGAAATGACCAAAACCATGTGTTCTGGCCTCACTGTGCACTGTaGAGCCAGCTGCAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWTIVCIILRNDQNHVFWPHCAL*SQLQEC Trigger: ACACTCCTGCAGCTGGCTGCACAGTGCACAGTGAGG...CCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCAAACAATGGTCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGACCATTGTTTGCATCATACTGAGAAATGACCAAAACCATGTGTTCTGGCGCTGCCTCCTTGAGTaGCCCTCCACTTCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWTIVCIILRNDQNHVFWRCLLE*PSTSCF Trigger: GAAGCAAGAAGTGGAGGGCCACTCAAGGAGGCAGCG...CCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCAAACAATGGTCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGGAGAAAGCCAGTGAAGAAGACTGTCCTGACAGGAGTTTGGACCATTCAGGGTACAGTTCCATaGTCAGCTGGCTCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRRKPVKKTVLTGVWTIQGTVP*SAGSCW Trigger: CCAACATGAGCCAGCTGACCATGGAACTGTACCCTG...AATGGTCCAAACTCCTGTCAGGACAGTCTTCTTCACTGGCTTTCTCCTAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR GCA 90 bp | ATAATTAGGAGAAAGCCAGTGAAGAAGACTGTCCTGACAGGAGTTTGGACCATTTGGCCCTCCACTTCTTaGTTCTCAGGCATAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIRRKPVKKTVLTGVWTIWPSTS*FSGIVS Trigger: AGAAACTATGCCTGAGAAGCAAGAAGTGGAGGGCCA...AATGGTCCAAACTCCTGTCAGGACAGTCTTCTTCACTGGCTTTCTCCTAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGGATCTGACAATGGCTTCATAATTAGGAGAAAGCCAGTGAAGAAGACTATATCCCAGAAGTCATaGTGTCCATTCCTCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSDNGFIIRRKPVKKTISQKS*CPFLKS Trigger: TGACTTGAGGAATGGACACCATGACTTCTGGGATAT...AGTCTTCTTCACTGGCTTTCTCCTAATTATGAAGCCATTGTCAGATCCTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGACCATTGTTTGCATCATACTGAGAAATGACCAAAACCATGTGTTCTGGCCTGCAGAACATCCCTaGAGATGTTATTGTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VWTIVCIILRNDQNHVFWPAEHP*RCYCHK Trigger: TTTATGACAATAACATCTCCAGGGATGTTCTGCAGG...CCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCAAACAATGGTCCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCAAAGAACTGTCCTAACTATAATCTTGAGAACCAATTAATTGAGCATACCGCTTTAACACCTTCTTaGCCTTGGACACTCCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSKNCPNYNLENQLIEHTALTPS*PWTLLM Trigger: CATTAGGAGTGTCCAAGGTCAAGAAGGTGTTAAAGC...GGTATGCTCAATTAATTGGTTCTCAAGATTATAGTTAGGACAGTTCTTTGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCTGTGTACAGTCAAAGAACTGTCCTAACTATAATCTTGAGAACCAAGGAAAGTCTCCAAGTTaGTTTTATCTATCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LHLCVQSKNCPNYNLENQGKSPS*FYLSAT Trigger: GGTTGCTGATAGATAAAACCAACTTGGAGACTTTCC...TTGGTTCTCAAGATTATAGTTAGGACAGTTCTTTGACTGTACACAGAGATGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | ACAACACAGTATCCCTCCATCTCTGTGTACAGTCAAAGAACTGTCCTAACTATACAAGTTTTGTCAATTTaGACAGATTCCCCACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TTQYPSISVYSQRTVLTIQVLSI*TDSPLY Trigger: ATACAGTGGGGAATCTGTCCAAATTGACAAAACTTG...TATAGTTAGGACAGTTCTTTGACTGTACACAGAGATGGAGGGATACTGTGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACAATGGCTTCATAATTAGGAGAAAGCCAGTGAAGAAGACTGTCCTGACAAGCATTCACAAAATGTaGTCTGATTTCCATAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: SDNGFIIRRKPVKKTVLTSIHKM*SDFHRY Trigger: GTATCTATGGAAATCAGACCACATTTTGTGAATGCT...TGTCAGGACAGTCTTCTTCACTGGCTTTCTCCTAATTATGAAGCCATTGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 90 bp | GTAGGTTCTGCAGAACAGAGATGGTCAGCACCTCCTTCCTCACTGTaGACTGTGCAGCCAGCTGCAGGAGTGTGGGTGGGGCTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VGSAEQRWSAPPSSL*TVQPAAGVWVGLPS Trigger: ACTTGGAAGCCCCACCCACACTCCTGCAGCTGGCTGCACAGTGCACAGTGAGGAAGGAGGTGCTGACCATCTCTGTTCTGCAGAACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CCA 90 bp | AACTCCACTCATTATAGACCTCTACTGGGGCAGGGTACAGTTCCATaGTCAGCTGGCTCATGTTGGCTGTGCGGTGCAGAAGATCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSTHYRPLLGQGTVP*SAGSCWLCGAEDPA Trigger: TGCAGGATCTTCTGCACCGCACAGCCAACATGAGCCAGCTGACCATGGAACTGTACCCTGCCCCAGTAGAGGTCTATAATGAGTGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 90 bp | TTCCAACTTCTCGCAGCACAGATGCAAGAAACCCTCTCTGTCCTTTaGCCACTGCAACAAATGTGTTTGCTGTTTATCTTCATGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQLLAAQMQETLSVL*PLQQMCLLFIFMPR Trigger: TCTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAGAAGTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 90 bp | TTGGACACTCCTAATGCTCCAATTTCCAACTTCTCGCAGCACAGATaGAAGAAACCCTCTCTGTCCTTTGCCCACTGCAACAAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDTPNAPISNFSQHR*KKPSLSFAHCNKCV Trigger: AACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAGAAGTTGGAAATTGGAGCATTAGGAGTGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CCA 90 bp | AAATCTCTCTACTTGAACATAACTCCACTCATTATAGACCTCTACTaGGGCAGGGTACAGTTCCATGGTCAGCTGGCTCATGTTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSLYLNITPLIIDLY*GRVQFHGQLAHVGC Trigger: ACAGCCAACATGAGCCAGCTGACCATGGAACTGTACCCTGCCCCAGTAGAGGTCTATAATGAGTGGAGTTATGTTCAAGTAGAGAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 90 bp | TGCAAGAAACCCTCTCTGTCCTTTGCCCACTGCAACAAATGTGTTTaGTGTTTATCTTCATGCCGAGAAGACTTGAAGGAAAGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CKKPSLSFAHCNKCV*CLSSCREDLKERSL Trigger: CAGTGACCTTTCCTTCAAGTCTTCTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGAACCAATTAATTGAGCATACCACAGAGAGAATATCAGGTTCTCAGGATGTGGCCCTCCACTTCTaGCTTCTCAGGCATAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LENQLIEHTTERISGSQDVALHF*LLRHSF Trigger: GAAACTATGCCTGAGAAGCAAGAAGTGGAGGGCCAC...ATCCTGAGAACCTGATATTCTCTCTGTGGTATGCTCAATTAATTGGTTCTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGGACCATTGTTTGCATCATACTGAGAAATGACCAAAACCATGTGTTCTGGAACACCTTCTTGACCTaGGACACTCCTAATGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VWTIVCIILRNDQNHVFWNTFLT*DTPNAP Trigger: TGGAGCATTAGGAGTGTCCAAGGTCAAGAAGGTGTT...CCAGAACACATGGTTTTGGTCATTTCTCAGTATGATGCAAACAATGGTCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CAA 90 bp | TCTGACAATGGCTTCATAATTAGGAGAAAGCCAGTGAAGAAGACTGTCCTGACAAGCTTTAACACCTTCTaGACCTTGGACACTCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SDNGFIIRRKPVKKTVLTSFNTF*TLDTPN Trigger: ATTAGGAGTGTCCAAGGTCAAGAAGGTGTTAAAGCT...TGTCAGGACAGTCTTCTTCACTGGCTTTCTCCTAATTATGAAGCCATTGTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGAACCAATTAATTGAGCATACCACAGAGAGAATATCAGGTTCTCAGGATTGGAAAGTCTCCAAGTaGGTTTTATCTATCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LENQLIEHTTERISGSQDWKVSK*VLSISN Trigger: GTTGCTGATAGATAAAACCAACTTGGAGACTTTCCA...ATCCTGAGAACCTGATATTCTCTCTGTGGTATGCTCAATTAATTGGTTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CCA 72 bp | ACCTCTACTGGGGCAGGGTACAGTTCCATGGTCAGCTaGCTCATGTTGGCTGTGCGGTGCAGAAGATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTGAGYSSMVS*LMLAVRCRRSC Trigger: GCAGGATCTTCTGCACCGCACAGCCAACATGAGCCAGCTGACCATGGAACTGTACCCTGCCCCAGTAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | GGTACAGTTCCATGGTCAGCTGGCTCATGTTGGCTGTaGGGTGCAGAAGATCCTGCAGAACATCCCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTVPWSAGSCWL*GAEDPAEHPWR Trigger: TCTCCAGGGATGTTCTGCAGGATCTTCTGCACCGCACAGCCAACATGAGCCAGCTGACCATGGAACTGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | GACTTGAAGGAAAGGTCACTGAACACCCTCAAACGCTaGCTCCTTGAGTGGCCCTCCACTTCTTGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DLKERSLNTLKR*LLEWPSTSCFS Trigger: TGAGAAGCAAGAAGTGGAGGGCCACTCAAGGAGGCAGCGTTTGAGGGTGTTCAGTGACCTTTCCTTCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | AGTTCCATGGTCAGCTGGCTCATGTTGGCTGTGCGGTaGAGAAGATCCTGCAGAACATCCCTGGAGATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSMVSWLMLAVR*RRSCRTSLEML Trigger: TAACATCTCCAGGGATGTTCTGCAGGATCTTCTGCACCGCACAGCCAACATGAGCCAGCTGACCATGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CCA 72 bp | AGGTCACTGAACACCCTCAAACGCTGCCTCCTTGAGTaGCCCTCCACTTCTTGCTTCTCAGGCATAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLNTLKRCLLE*PSTSCFSGIVS Trigger: AGAAACTATGCCTGAGAAGCAAGAAGTGGAGGGCCACTCAAGGAGGCAGCGTTTGAGGGTGTTCAGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | CCTAATGCTCCAATTTCCAACTTCTCGCAGCACAGATaGAAGAAACCCTCTCTGTCCTTTGCCCACTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PNAPISNFSQHR*KKPSLSFAHCN Trigger: GTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAGAAGTTGGAAATTGGAGCATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CAA 90 bp | TTTCCAACTTCTCGCAGCACAGATGCAAGAAACCCTCTCTGTCCTTaGCCCACTGCAACAAATGTGTTTGCTGTTTATCTTCATGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: FPTSRSTDARNPLCP*PTATNVFAVYLHAE Trigger: CTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAGAAGTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | TTGAATAGTGGTGGAAAGAGCTTCATTGGTAGGTTCTaGAGAACAGAGATGGTCAGCACCTCCTTCCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LNSGGKSFIGRF*RTEMVSTSFLT Trigger: AGTGAGGAAGGAGGTGCTGACCATCTCTGTTCTGCAGAACCTACCAATGAAGCTCTTTCCACCACTATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | CTCGCAGCACAGATGCAAGAAACCCTCTCTGTCCTTTaGCCACTGCAACAAATGTGTTTGCTGTTTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAAQMQETLSVL*PLQQMCLLFIF Trigger: GAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | GCCCACTGCAACAAATGTGTTTGCTGTTTATCTTCATaGCGAGAAGACTTGAAGGAAAGGTCACTGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: AHCNKCVCCLSS*REDLKERSLNT Trigger: GGTGTTCAGTGACCTTTCCTTCAAGTCTTCTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | CCCTCTCTGTCCTTTGCCCACTGCAACAAATGTGTTTaGTGTTTATCTTCATGCCGAGAAGACTTGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSLSFAHCNKCV*CLSSCREDLKE Trigger: TTCCTTCAAGTCTTCTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CAA 72 bp | CCAACTCCCTCCAGTATAGCCTGGAAAGTCTCCAAGTaGGTTTTATCTATCAGCAACCCAACAAGAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PTPSSIAWKVSK*VLSISNPTRRL Trigger: TAGCCTTCTTGTTGGGTTGCTGATAGATAAAACCAACTTGGAGACTTTCCAGGCTATACTGGAGGGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CAA 72 bp | TCTCGCAGCACAGATGCAAGAAACCCTCTCTGTCCTTaGCCCACTGCAACAAATGTGTTTGCTGTTTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSTDARNPLCP*PTATNVFAVYL Trigger: AAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCATCTGTGCTGCGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CAA 90 bp | ATGCAAGAAACCCTCTCTGTCCTTTGCCCACTGCAACAAATGTGTTaGCTGTTTATCTTCATGCCGAGAAGACTTGAAGGAAAGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: MQETLSVLCPLQQMC*LFIFMPRRLEGKVT Trigger: AGTGACCTTTCCTTCAAGTCTTCTCGGCATGAAGATAAACAGCAAACACATTTGTTGCAGTGGGCAAAGGACAGAGAGGGTTTCTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS CAA 90 bp | TCCAACTCCTTGATGAACTCTGGCTGTAAAAGCTTTAACACCTTCTaGACCTTGGACACTCCTAATGCTCCAATTTCCAACTTCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SNSLMNSGCKSFNTF*TLDTPNAPISNFSQ Trigger: CTGCGAGAAGTTGGAAATTGGAGCATTAGGAGTGTCCAAGGTCAAGAAGGTGTTAAAGCTTTTACAGCCAGAGTTCATCAAGGAGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||
| CDS GCA 72 bp | GAGTCCTTCATCCTACAGTCTTCTAATTCTAGAGTCTaGAGAGTATCTGCAACACTCTCTAAGAAAAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESFILQSSNSRV*RVSATLSKKNL Trigger: CAAATTTTTCTTAGAGAGTGTTGCAGATACTCTGCAGACTCTAGAATTAGAAGACTGTAGGATGAAGGACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105762.2 |
||