Pregenerated sensors for PRAMEL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046862Ensembl transcript IDs: ENSMUST00000037356.8, ENSMUST00000059790.11, ENSMUST00000132915.2, ENSMUST00000155157.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTACCGGCTGTGGTCTGCGCAGTCTGACAATGGCTGGCTCACAATaGAAAGGCCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LTGCGLRSLTMAGSQ*KGQGSGSSFVKLEV Trigger: GACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGGCCTTTTCATTGTGAGCCAGCCATTGTCAGACTGCGCAGACCACAGCCGGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 90 bp | GCGCAGTCTGACAATGGCTGGCTCACAATGAAAAGGCCAAGGATCTaGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: AQSDNGWLTMKRPRI*EFIRKAGSLCSPIW Trigger: CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGGCCTTTTCATTGTGAGCCAGCCATTGTCAGACTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 90 bp | CAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTTACCAATGCTaGCAAGAGAATGCATGGTCACCATTTAGGGCATGTGCTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: QTRQHSFLLLSLYQC*QENAWSPFRACAVS Trigger: TGAAACAGCACATGCCCTAAATGGTGACCATGCATTCTCTTGGCAGCATTGGTAAAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 90 bp | TGCAGTCCAATCTGGTGCTGCAATCCTAGGCTCCTAGAGAGCTGCTaGCTTTCAGGCTATGTTAAAATCCTGAAGAAAATGAATACTGCC | + |
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Preference number: 1 (lower is better) Translates to: CSPIWCCNPRLLESC*LSGYVKILKKMNTA Trigger: GGCAGTATTCATTTTCTTCAGGATTTTAACATAGCCTGAAAGCCAGCAGCTCTCTAGGAGCCTAGGATTGCAGCACCAGATTGGACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 90 bp | CTCTGCAGTCCAATCTGGTGCTGCAATCCTAGGCTCCTAGAGAGCTaGTGGCTTTCAGGCTATGTTAAAATCCTGAAGAAAATGAATACT | + |
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Preference number: 1 (lower is better) Translates to: LCSPIWCCNPRLLES*WLSGYVKILKKMNT Trigger: AGTATTCATTTTCTTCAGGATTTTAACATAGCCTGAAAGCCAGCAGCTCTCTAGGAGCCTAGGATTGCAGCACCAGATTGGACTGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 90 bp | ATTTTGTATACTAAAGCAATGAGCACACAAGTGAGACATAACAGATaGCCAGGCAAAGGTAAAGGAGGGAAGACATCTGACGGCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ILYTKAMSTQVRHNR*PGKGKGGKTSDGFH Trigger: GTGAAAGCCGTCAGATGTCTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGTATACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGGTGCTCAACTGGGGCTaGAGAGATGGTTCAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWVLNWG*RDGSAG Trigger: GCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCAC...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CAA 90 bp | CAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTaGCAGAAGACTCATATGATGGGTCACAGCCATCCAAAACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QLGLERWFSRQEHLF*QKTHMMGHSHPKLQ Trigger: CTGGAGTTTTGGATGGCTGTGACCCATCATATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACACTGGGGCTGGAGAGATaGTTCAGCAGGCAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QSFRGQGHLLETFVFKGTLGLER*FSRQEH Trigger: GTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAG...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CAA 90 bp | AGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTaGTTCTTGCAGAAGACTCATATGATGGGTCACAGCCATCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SAQLGLERWFSRQEH*FLQKTHMMGHSHPK Trigger: TTTTGGATGGCTGTGACCCATCATATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAAAGAAGTAGGACAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTGAAGCTCAGTCTTTGTaGTCTAACCCTCCAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: LPKEVGQTRQHSFLLLSLEAQSL*SNPPAH Trigger: GTGTGCTGGAGGGTTAGACCACAAAGACTGAGCTTC...AAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTGTCCTACTTCTTTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTTTTCCAGGGGATCCAATaGCCACATCTGAACTCTATA | + |
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Preference number: 2 (lower is better) Translates to: KCSTGAGEMVQQARALVLFQGIQ*PHLNSI Trigger: TATAGAGTTCAGATGTGGGCATTGGATCCCCTGGAA...AAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGAGGCTCCTAGAGAGCTaGTGGCTTTCAGGCTATGTT | + |
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Preference number: 2 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKRLLES*WLSGYV Trigger: AACATAGCCTGAAAGCCAGCAGCTCTCTAGGAGCCT...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTTCCAGGGGATCCAATaGCCACATCTGAACTCTATA | + |
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Preference number: 2 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWFQGIQ*PHLNSI Trigger: TATAGAGTTCAGATGTGGGCATTGGATCCCCTGGAA...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGATAATGAGCAGTGTGTaGCCATGTGCTTTGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWIMSSV*PCALGS Trigger: AGAACCCAAAGCACATGGCCACACACTGCTCATTAT...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCATTTTACTACCATGTGAGAAGGAGAAAGTCATTCATTATCATGACCTGGTGCTCAACTGGGGCTaGAGAGATGGTTCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LAILLPCEKEKVIHYHDLVLNWG*RDGSAG Trigger: GCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCAC...CAGGTCATGATAATGAATGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCCAAGAGAATGCATaGTCACCATTTAGGGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWCQENA*SPFRAC Trigger: ACATGCCCTAAATGGTGACCATGCATTCTCTTGGCA...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CAA 90 bp | CACCATTTGGGTTCCCAGATAATGAGCAGTGTGTGGCCATGTGCTTaGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HHLGSQIMSSVWPCA*GSLDARPVPRLSFL Trigger: GAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGCACATGGCCACACACTGCTCATTATCTGGGAACCCAAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCAAGAGAATGCATGGTCACCATTTAGGGCATGTGCTGTTTCATCAAGTGCATTTATTTAGAAAGTaGTCAACTGGGGCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AAKRMHGHHLGHVLFHQVHLFRK*STGAGE Trigger: CTCTCCAGCCCCAGTTGAGCACTTTCTAAATAAATG...CACTTGATGAAACAGCACATGCCCTAAATGGTGACCATGCATTCTCTTGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGAAGCTCAGTCTTTGTaGTCTAACCCTCCAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKEAQSL*SNPPAH Trigger: GTGTGCTGGAGGGTTAGACCACAAAGACTGAGCTTC...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGCTCCAAAAATCTGGTaGGAAGGACACCAGAACATC | + |
|
Preference number: 2 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKAPKIW*EGHQNI Trigger: GATGTTCTGGTGTCCTTCTCACCAGATTTTTGGAGC...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | CAATGCCCACATCTGAACTCTATAGGCACCAAGGATACATATATGCAGGTAAACCACAAACATCTGTCCTaGGTCCCATTGTTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QCPHLNSIGTKDTYMQVNHKHLS*VPLFSR Trigger: TCTAGAGAACAATGGGACCCAGGACAGATGTTTGTG...GTTTACCTGCATATATGTATCCTTGGTGCCTATAGAGTTCAGATGTGGGCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCATACTTCAGTAATCTTAGCATTTAGAAGGTGGAGGCAGGAGATTTCAAGGTGCCAAGAGAATGCATaGTCACCATTTAGGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: CHTSVILAFRRWRQEISRCQENA*SPFRAC Trigger: ACATGCCCTAAATGGTGACCATGCATTCTCTTGGCA...CCTTGAAATCTCCTGCCTCCACCTTCTAAATGCTAAGATTACTGAAGTATGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACACATTTTACTACCATGTaGGAAGGAGAAAGTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: QSFRGQGHLLETFVFKGTHFTTM*EGESHS Trigger: TGAATGACTTTCTCCTTCTCACATGGTAGTAAAATG...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACATTTATTTAGAAAGTaGTCAACTGGGGCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKHLFRK*STGAGE Trigger: CTCTCCAGCCCCAGTTGAGCACTTTCTAAATAAATG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCTAGAAGCCCTGAAAAATAGCCTCCATTTTCTTTaGTCTTTGTTATCTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: TGDLCFQRDSRRLEALKNSLHFL*SLLSLT Trigger: AGTCAAAGATAACAAAGAGCAAAGAAAATGGAGGCT...ATTTTTCAGGGCTTCTAGCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAAGAAATGAAGGATTGTCTTTTGATTCCACAAACATCTGTCCTGGGTCCATAATGAGCAGTGTGTaGCCATGTGCTTTGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KKRNEGLSFDSTNICPGSIMSSV*PCALGS Trigger: AGAACCCAAAGCACATGGCCACACACTGCTCATTAT...GGACCCAGGACAGATGTTTGTGGAATCAAAAGACAATCCTTCATTTCTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CAA 90 bp | CAAACCCCTCAGAGGAGAATGCATTGCTCATTTTACATTGACATTTaGTATACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: QTPQRRMHCSFYIDI*YTKAMSTQVRHNRC Trigger: GCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGTATACAAAATGTCAATGTAAAATGAGCAATGCATTCTCCTCTGAGGGGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 72 bp | GCTTACCGGCTGTGGTCTGCGCAGTCTGACAATGGCTaGCTCACAATGAAAAGGCCAAGGATCTGGGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: AYRLWSAQSDNG*LTMKRPRIWEF Trigger: GAACTCCCAGATCCTTGGCCTTTTCATTGTGAGCCAGCCATTGTCAGACTGCGCAGACCACAGCCGGTAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 72 bp | CGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCTaGAATCCTAGGCTCCTAGAGAGCTGCTGGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: RKAGSLCSPIWC*NPRLLESCWLS Trigger: TGAAAGCCAGCAGCTCTCTAGGAGCCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 72 bp | CCTGGGTCCCATTGTTCTCTAGAAGCTCAGTCTTTGTaGTCTAACCCTCCAGCACACCATTTGGGTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGSHCSLEAQSL*SNPPAHHLGSQ Trigger: CTGGGAACCCAAATGGTGTGCTGGAGGGTTAGACCACAAAGACTGAGCTTCTAGAGAACAATGGGACCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAAAGAAGTAGGACAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTCTGTCCTGGGTCCCATaGTTCTCTAGAAGCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: LPKEVGQTRQHSFLLLSLLSWVP*FSRSSV Trigger: GACTGAGCTTCTAGAGAACAATGGGACCCAGGACAG...AAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTGTCCTACTTCTTTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 72 bp | ATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTaGTGCAATCCTAGGCTCCTAGAGAGCTGCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: IRKAGSLCSPIW*CNPRLLESCWL Trigger: AAGCCAGCAGCTCTCTAGGAGCCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR TCA 72 bp | GCAGGCAAGAGCACTTGTTCTTGCAGAAGACTCATATaGTGGGTCACAGCCATCCAAAACTCCAGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: AGKSTCSCRRLI*WVTAIQNSSSR Trigger: CCTGGAACTGGAGTTTTGGATGGCTGTGACCCATCATATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR TCA 72 bp | TGTGGTCTGCGCAGTCTGACAATGGCTGGCTCACAATaGAAAGGCCAAGGATCTGGGAGTTCATTCGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: CGLRSLTMAGSQ*KGQGSGSSFVK Trigger: CTTTACGAATGAACTCCCAGATCCTTGGCCTTTTCATTGTGAGCCAGCCATTGTCAGACTGCGCAGACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 72 bp | AGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTaGAGTCCAATCTGGTGCTGCAATCCTAGGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: RIWEFIRKAGSL*SPIWCCNPRLL Trigger: TAGGAGCCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 72 bp | GACAATGGCTGGCTCACAATGAAAAGGCCAAGGATCTaGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: DNGWLTMKRPRI*EFIRKAGSLCS Trigger: ACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGGCCTTTTCATTGTGAGCCAGCCATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CAA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTAGCAGGCAAGAGCACTaGTTCTTGCAGAAGACTCAT | + |
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Preference number: 3 (lower is better) Translates to: QPGLPLQMSREVRQHRIFSRQEH*FLQKTH Trigger: ATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCT...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 72 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATaGCCAGGCAAAGGTAAAGGAGGGAAGACATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: TKAMSTQVRHNR*PGKGKGGKTSD Trigger: GTCAGATGTCTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 72 bp | ATCTGGTGCTGCAATCCTAGGCTCCTAGAGAGCTGCTaGCTTTCAGGCTATGTTAAAATCCTGAAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: IWCCNPRLLESC*LSGYVKILKKM Trigger: CATTTTCTTCAGGATTTTAACATAGCCTGAAAGCCAGCAGCTCTCTAGGAGCCTAGGATTGCAGCACCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGCCATTTTACTACCATGTGAGAAGGAGAAAGTCATTCATTATCATGACCTGAGCAGGCAAGAGCACTaGTTCTTGCAGAAGACTCAT | + |
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Preference number: 3 (lower is better) Translates to: LAILLPCEKEKVIHYHDLSRQEH*FLQKTH Trigger: ATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCT...CAGGTCATGATAATGAATGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CAA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACATGCTCTTTGTTATCTTaGACTTCACTTCAGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: QSFRGQGHLLETFVFKGTCSLLS*TSLQPS Trigger: AGATGGCTGAAGTGAAGTCAAAGATAACAAAGAGCA...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR CCA 72 bp | GTGAGAAGGACACCAGAACATCCAGGTTCTAAAATCTaGCCATTTTACTACCATGTGAGAAGGAGAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: VRRTPEHPGSKI*PFYYHVRRRKS Trigger: TGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAGATTTTAGAACCTGGATGTTCTGGTGTCCTTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR-3UTR CAA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTATGAAGGATTGTCTTTaGATTCCACAAACATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: QPGLPLQMSREVRQHRIFMKDCL*IPQTSV Trigger: GACAGATGTTTGTGGAATCAAAAGACAATCCTTCAT...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| 3UTR GCA 72 bp | AGTGATAAAGCAAAGTGGCTTAGCCTCCATTTTCTTTaGTCTTTGTTATCTTTGACTTCACTTCAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SDKAKWLSLHFL*SLLSLTSLQPS Trigger: AGATGGCTGAAGTGAAGTCAAAGATAACAAAGAGCAAAGAAAATGGAGGCTAAGCCACTTTGCTTTATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCCTCTGTACTGACAGCTaGAGGAGTGTGGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGLCTDS*RSVGGS Trigger: GGACCCACCCACACTCCTGCAGCTGTCAGTACAGAG...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCGTGGGAAAAGCGCCCTaGGAAGGTACTGCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGVGKAP*EGTAEK Trigger: CTTCTCTGCAGTACCTTCCCAGGGCGCTTTTCCCAC...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCGCCCTGGGAAGGTACTaGAGAGAAGAAATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESAQLGLERWFSRQEHLFALGRY*REEMAR Trigger: CCTGGCCATTTCTTCTCTGCAGTACCTTCCCAGGGC...GAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTCCAGTTCTAGGGTCTaGAGGGTGCCTGCAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ESAQLGLERWFSRQEHLFSSSRV*RVPATL Trigger: GAGTGTTGCAGGCACCCTGCAGACCCTAGAACTGGA...GAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTGGGAAAGGGCCACACTaGCACCATGGCCCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGLPLQMSREVRQHRIFGKGPH*HHGPQD Trigger: GTCCTGAGGGCCATGGTGGCAGTGTGGCCCTTTCCC...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTTCTCCTGAGGAGGTCGTaGAAAGGCACAGGACGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCSTGAGEMVQQARALVLLLRRS*KGTGRK Trigger: CTTACGTCCTGTGCCTTTCCACGACCTCCTCAGGAG...AAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| 3UTR CAA 72 bp | CTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTaGTTCTTGCAGAAGACTCATATGATGGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLERWFSRQEH*FLQKTHMMGHS Trigger: GCTGTGACCCATCATATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCGATGCTGGAGAGAGTTaGGTTTGGAGAACTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGDAGES*VWRTER Trigger: TCTCTCAGTTCTCCAAACTCAACTCTCTCCAGCATC...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCCTGGTCCAGGTAAGATaGAAAATGCACCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGLVQVR*KMHQSG Trigger: TCCACTCTGGTGCATTTTGCATCTTACCTGGACCAG...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCCAAAATGCACCAGAGTaGACAGGCTCCAACCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGQNAPE*TGSNLY Trigger: ATACAGGTTGGAGCCTGTCCACTCTGGTGCATTTTG...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACACTCTGTACTGACAGCTaGAGGAGTGTGGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSFRGQGHLLETFVFKGTLCTDS*RSVGGS Trigger: GGACCCACCCACACTCCTGCAGCTGTCAGTACAGAG...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTCCATCCAGCACAGCCTaGAAGATCTCCAGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPGLPLQMSREVRQHRIFPSSTA*KISRWG Trigger: TCCCCACCTGGAGATCTTGCAGGCTGTGCTGGATGG...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGTCCAGTTCTAGGGTCTaGAGGGTGCCTGCAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKSSSRV*RVPATL Trigger: GAGTGTTGCAGGCACCCTGCAGACCCTAGAACTGGA...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTACAGCTGCAGGAGTGTaGGTGGGTCCTGGACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPGLPLQMSREVRQHRIFTAAGV*VGPGHS Trigger: TGAGTGTCCAGGACCCACCCACACTCCTGCAGCTGT...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGACTGCAGAGAAGAAATaGCCAGGGCCTCGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKTAEKK*PGPRPS Trigger: TGAGGGACGAGGCCCTGGCCATTTCTTCTCTGCAGT...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCGAACTTCTTCTCTGCTaGGCCCACTGTAACAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGELLLC*AHCNKY Trigger: ATACTTGTTACAGTGGGCCCAGCAGAGAAGAAGTTC...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTTGAGAGACAAACTTGGTaGTACACTTCTGGATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KCSTGAGEMVQQARALVLERQTW*YTSGCP Trigger: CGGACATCCAGAAGTGTATCACCAAGTTTGTCTCTC...AAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | AGACAGCACAGGATCTTTCCAGCCAAGCCACAGGAAAAGAACAACACTGAAACCTCAGGTTCAGCTGTTTaGGCTGATGGAGGCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQHRIFPAKPQEKNNTETSGSAV*ADGGSD Trigger: GTCAGAGCCTCCATCAGCTCAAACAGCTGAACCTGA...GGTTTCAGTGTTGTTCTTTTCCTGTGGCTTGGCTGGAAAGATCCTGTGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGCACAGCATAGCCGTATaGAACTTCTTCTCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWHSIAV*NFFSAG Trigger: CCCAGCAGAGAAGAAGTTCCATACGGCTATGCTGTG...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAAGAAGTAGGACAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTTGGATGCTGTCTGGCTaGAACACCATCAAGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKEVGQTRQHSFLLLSLWMLSG*NTIKTF Trigger: GAAGGTCTTGATGGTGTTCCAGCCAGACAGCATCCA...AAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTGTCCTACTTCTTTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| 3UTR CAA 72 bp | CTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTaGCAGAAGACTCATATGATGGGTCACAGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LERWFSRQEHLF*QKTHMMGHSHP Trigger: TGGATGGCTGTGACCCATCATATGAGTCTTCTGCAAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | AGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCACATTAGTTTGTCTGTaGTTGAAGGCTTCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQGHLLETFVFKGTAGGTLVCL*LKASLK Trigger: CTTCAAGGAAGCCTTCAATCACAGACAAACTAATGT...GCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGGATGCTGGAGAGAGTTaGGTTTGGAGAACTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWDAGES*VWRTER Trigger: TCTCTCAGTTCTCCAAACTCAACTCTCTCCAGCATC...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTTCAGGTTCAGCTGTTTaGGCTGATGGAGGCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGLPLQMSREVRQHRIFSGSAV*ADGGSD Trigger: GTCAGAGCCTCCATCAGCTCAAACAGCTGAACCTGA...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | TGCCATACTTCAGTAATCTTAGCATTTAGAAGGTGGAGGCAGGAGATTTCAAGGCCATCCAGCACAGCCTaGAAGATCTCCAGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHTSVILAFRRWRQEISRPSSTA*KISRWG Trigger: TCCCCACCTGGAGATCTTGCAGGCTGTGCTGGATGG...CCTTGAAATCTCCTGCCTCCACCTTCTAAATGCTAAGATTACTGAAGTATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAACAGCTGCAGGAGTGTaGGTGGGTCCTGGACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKTAAGV*VGPGHS Trigger: TGAGTGTCCAGGACCCACCCACACTCCTGCAGCTGT...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTGTGGTCTCCATCCTCTaGTCCAACCCAAACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPGLPLQMSREVRQHRIFVVSIL*SNPNIP Trigger: TGGGATGTTTGGGTTGGACCAGAGGATGGAGACCAC...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCTAGAAGCCCTGAAAAATTGGATGCTGTCTGGCTaGAACACCATCAAGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGDLCFQRDSRRLEALKNWMLSG*NTIKTF Trigger: GAAGGTCTTGATGGTGTTCCAGCCAGACAGCATCCA...ATTTTTCAGGGCTTCTAGCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGGAGAGACAAACTTGGTaGTACACTTCTGGATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKERQTW*YTSGCP Trigger: CGGACATCCAGAAGTGTATCACCAAGTTTGTCTCTC...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGCTCAGACTGGCTGTGTaGTACAGAAGGTCCTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKLRLAV*YRRSFR Trigger: TCTAAAGGACCTTCTGTATCACACAGCCAGTCTGAG...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCGCCCTGGGAAGGTACTaGAGAGAAGAAATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSLDARPVPRLSFLSIALGRY*REEMAR Trigger: CCTGGCCATTTCTTCTCTGCAGTACCTTCCCAGGGC...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCCAAGAGAATGCATGGTCACCATTTAGGGCATGTGCTGTTTCATCAAGTGGTTCCAATTCTTGGATaGTGTCTGGCTGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: AAKRMHGHHLGHVLFHQVVPILG*CLAGTP Trigger: TGGTGTTCCAGCCAGACAGCATCCAAGAATTGGAAC...CACTTGATGAAACAGCACATGCCCTAAATGGTGACCATGCATTCTCTTGGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | TTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCTGCAATCCTAGGGTTCCAATTCTTGGATaGTGTCTGGCTGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FIRKAGSLCSPIWCCNPRVPILG*CLAGTP Trigger: TGGTGTTCCAGCCAGACAGCATCCAAGAATTGGAAC...CCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | TTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCTGCAATCCTAGGCTGGTCCAGGTAAGATaGAAAATGCACCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIRKAGSLCSPIWCCNPRLVQVR*KMHQSG Trigger: TCCACTCTGGTGCATTTTGCATCTTACCTGGACCAG...CCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAACTGCAGAGAAGAAATaGCCAGGGCCTCGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKTAEKK*PGPRPS Trigger: TGAGGGACGAGGCCCTGGCCATTTCTTCTCTGCAGT...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACTCAGGTCCAGCACTTaGAGCTTCCTCCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKLRSST*SFLLLG Trigger: TCCCAGAAGGAGGAAGCTCCAAGTGCTGGACCTGAG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGCAAAATGCACCAGAGTaGACAGGCTCCAACCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKQNAPE*TGSNLY Trigger: ATACAGGTTGGAGCCTGTCCACTCTGGTGCATTTTG...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCCTCCTGAGGAGGTCGTaGAAAGGCACAGGACGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSLDARPVPRLSFLSILLRRS*KGTGRK Trigger: CTTACGTCCTGTGCCTTTCCACGACCTCCTCAGGAG...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | TTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCTGCAATCCTAGGCCATTCATGGAGAGATaGTGGAGAGAGTTGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIRKAGSLCSPIWCCNPRPFMER*WRELSL Trigger: CAAACTCAACTCTCTCCAGCATCTCTCCATGAATGG...CCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCCATTTTACTACCATGTGAGAAGGAGAAAGTCATTCATTATCATGACCTGCTCAGGTCCAGCACTTaGAGCTTCCTCCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAILLPCEKEKVIHYHDLLRSST*SFLLLG Trigger: TCCCAGAAGGAGGAAGCTCCAAGTGCTGGACCTGAG...CAGGTCATGATAATGAATGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCGTGGTCTCCATCCTCTaGTCCAACCCAAACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGSLDARPVPRLSFLSIVVSIL*SNPNIP Trigger: TGGGATGTTTGGGTTGGACCAGAGGATGGAGACCAC...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGACCTTTGTTTTCAAAGGGACAGCCGGAGGCTAGAAGCCCTGAAAAATGAACTTCTTCTCTGCTaGGCCCACTGTAACAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGDLCFQRDSRRLEALKNELLLC*AHCNKY Trigger: ATACTTGTTACAGTGGGCCCAGCAGAGAAGAAGTTC...ATTTTTCAGGGCTTCTAGCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAAGAAGTAGGACAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTTTTAGTTCCAATTCTTaGATGCTGTCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKEVGQTRQHSFLLLSLFSSNS*MLSGWN Trigger: GTTCCAGCCAGACAGCATCCAAGAATTGGAACTAAA...AAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTGTCCTACTTCTTTGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAGGAGGGAAGAGTAGATGCCATTCATaGAGAGATGCTGGAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSTQVRHNRCPGKGKGGKSRCHS*RDAGES Trigger: ACTCTCTCCAGCATCTCTCCATGAATGGCATCTACT...CTTCCCTCCTTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGGTTAAAAGGAGTTTTTaGAGGTTTCTCATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWVKRSF*RFLIWS Trigger: GGACCAGATGAGAAACCTTCAAAAACTCCTTTTAAC...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGAGGTATTTAGAACCTTaGAGGTGTTCTTGTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWRYLEP*RCSCES Trigger: GGATTCACAAGAACACCTTCAAGGTTCTAAATACCT...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | AGACAGCACAGGATCTTTCCAGCCAAGCCACAGGAAAAGAACAACACTGAAACCCACTGGAAAAGTAGATaGCATTCATGGAGAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQHRIFPAKPQEKNNTETHWKSR*HSWRDA Trigger: AGCATCTCTCCATGAATGGCATCTACTTTTCCAGTG...GGTTTCAGTGTTGTTCTTTTCCTGTGGCTTGGCTGGAAAGATCCTGTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | TTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTGCTGCAATCCTAGGTTTAGTTCCAATTCTTaGATGCTGTCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FIRKAGSLCSPIWCCNPRFSSNS*MLSGWN Trigger: GTTCCAGCCAGACAGCATCCAAGAATTGGAACTAAA...CCTAGGATTGCAGCACCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACAAGTAGATGCCATTCATaGAGAGATGCTGGAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSFRGQGHLLETFVFKGTSRCHS*RDAGES Trigger: ACTCTCTCCAGCATCTCTCCATGAATGGCATCTACT...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACTCAGACTGGCTGTGTaGTACAGAAGGTCCTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKLRLAV*YRRSFR Trigger: TCTAAAGGACCTTCTGTATCACACAGCCAGTCTGAG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAAGAAGTAGGACAAACTCGGCAGCACAGCTTCCTTCTTCTCTCTCTTTGTAACAAGTATGCTTaGTGTTCATTCAAATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKEVGQTRQHSFLLLSLCNKYA*CSFKWN Trigger: GTTCCATTTGAATGAACACCAAGCATACTTGTTACA...AAGAGAGAGAAGAAGGAAGCTGTGCTGCCGAGTTTGTCCTACTTCTTTGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGAAATGAAGGATTGTCTTTTGATTCCACAAACATCTGTCCTGGGTCCCACAGCATAGCCGTATaGAACTTCTTCTCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKRNEGLSFDSTNICPGSHSIAV*NFFSAG Trigger: CCCAGCAGAGAAGAAGTTCCATACGGCTATGCTGTG...GGACCCAGGACAGATGTTTGTGGAATCAAAAGACAATCCTTCATTTCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACACTGGAAAAGTAGATaGCATTCATGGAGAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKHWKSR*HSWRDA Trigger: AGCATCTCTCCATGAATGGCATCTACTTTTCCAGTG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCCATTTTACTACCATGTGAGAAGGAGAAAGTCATTCATTATCATGACCTGTGGTGTTCATTCAAATaGAACCTGAGGCACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAILLPCEKEKVIHYHDLWCSFK*NLRHRS Trigger: TGACCTGTGCCTCAGGTTCCATTTGAATGAACACCA...CAGGTCATGATAATGAATGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCAGCTCAGGACAAAGTTaGACAAATCTTCCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSLDARPVPRLSFLSISSGQS*TNLPIR Trigger: CCTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCT...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAAAGCTCAGGACAAAGTTaGACAAATCTTCCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKSSGQS*TNLPIR Trigger: CCTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCT...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCACATTAGTTTGTCTGTaGTTGAAGGCTTCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSLDARPVPRLSFLSITLVCL*LKASLK Trigger: CTTCAAGGAAGCCTTCAATCACAGACAAACTAATGT...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR TCA 90 bp | CAATGCCCACATCTGAACTCTATAGGCACCAAGGATACATATATGCAGGTAAACGTTAAAAGGAGTTTTTaGAGGTTTCTCATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCPHLNSIGTKDTYMQVNVKRSF*RFLIWS Trigger: GGACCAGATGAGAAACCTTCAAAAACTCCTTTTAAC...GTTTACCTGCATATATGTATCCTTGGTGCCTATAGAGTTCAGATGTGGGCATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGAAATGAAGGATTGTCTTTTGATTCCACAAACATCTGTCCTGGGTCCTGGTGTTCATTCAAATaGAACCTGAGGCACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKRNEGLSFDSTNICPGSWCSFK*NLRHRS Trigger: TGACCTGTGCCTCAGGTTCCATTTGAATGAACACCA...GGACCCAGGACAGATGTTTGTGGAATCAAAAGACAATCCTTCATTTCTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | CAATCCTTTAGGGGACAGGGACATCTACTGGAGACCTTTGTTTTCAAAGGGACATGTAACAAGTATGCTTaGTGTTCATTCAAATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSFRGQGHLLETFVFKGTCNKYA*CSFKWN Trigger: GTTCCATTTGAATGAACACCAAGCATACTTGTTACA...TGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCCTGTCCCCTAAAGGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACCTTTAGAACAGCCATaGAGATGTCATTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKPLEQP*RCHCHR Trigger: TCTATGACAATGACATCTCCATGGCTGTTCTAAAGG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGAAATGAAGGATTGTCTTTTGATTCCACAAACATCTGTCCTGGGTCCCCTTTAGAACAGCCATaGAGATGTCATTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKRNEGLSFDSTNICPGSPLEQP*RCHCHR Trigger: TCTATGACAATGACATCTCCATGGCTGTTCTAAAGG...GGACCCAGGACAGATGTTTGTGGAATCAAAAGACAATCCTTCATTTCTTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| 3UTR CAA 72 bp | AAAGCAAAGTGGCTTAGCCTCCATTTTCTTTGCTCTTaGTTATCTTTGACTTCACTTCAGCCATCTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KAKWLSLHFLCS*LSLTSLQPSLI Trigger: TATCAAAGATGGCTGAAGTGAAGTCAAAGATAACAAAGAGCAAAGAAAATGGAGGCTAAGCCACTTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| 3UTR CAA 72 bp | CAGAGGAGAATGCATTGCTCATTTTACATTGACATTTaGTATACTAAAGCAATGAGCACACAAGTGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QRRMHCSFYIDI*YTKAMSTQVRH Trigger: ATGTCTCACTTGTGTGCTCATTGCTTTAGTATACAAAATGTCAATGTAAAATGAGCAATGCATTCTCCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS TCA 90 bp | AACAGCCCTCCAGTTCTAGGGTCTGCAGGGTGCCTGCAACACTCCTaGGGAGGTCGTGGAAAGGCACAGGACGTAAGTCAATCAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSPPVLGSAGCLQHS*GGRGKAQDVSQSTS Trigger: TGAAGTTGATTGACTTACGTCCTGTGCCTTTCCACGACCTCCTCAGGAGTGTTGCAGGCACCCTGCAGACCCTAGAACTGGAGGGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS TCA 90 bp | TTGATGAAGGCGCTTTGCTATCTGCTTTTCACACACAGTCTCTGCTaGGTGGTCTCCATCCTCTGGTCCAACCCAAACATCCCAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMKALCYLLFTHSLC*VVSILWSNPNIPEV Trigger: GACTTCTGGGATGTTTGGGTTGGACCAGAGGATGGAGACCACTCAGCAGAGACTGTGTGTGAAAAGCAGATAGCAAAGCGCCTTCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
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| CDS TCA 90 bp | CCAATTCTTGGATGCTGTCTGGCTGGAACACCATCAAGACCTTCCTaGCAGTGTACACAGGCAAAGCCCAAATCTGCATCTTCACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PILGCCLAGTPSRPS*QCTQAKPKSASSHS Trigger: GCTGTGTGAAGATGCAGATTTGGGCTTTGCCTGTGTACACTGTCAGGAAGGTCTTGATGGTGTTCCAGCCAGACAGCATCCAAGAATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CCA 90 bp | CAGGACATTAGTTTGTCTGTGATTGAAGGCTTCCTTGAAGAGCAGTaGGAAAAGCGCCCTGGGAAGGTACTGCAGAGAAGAAATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDISLSVIEGFLEEQ*EKRPGKVLQRRNGQ Trigger: CTGGCCATTTCTTCTCTGCAGTACCTTCCCAGGGCGCTTTTCCCACTGCTCTTCAAGGAAGCCTTCAATCACAGACAAACTAATGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000132915.2 ENSMUST00000155157.2 |
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| CDS CCA 90 bp | TGCACCAGAGTGGACAGGCTCCAACCTGTATTTAGTTCCAATTCTTaGATGCTGTCTGGCTGGAACACCATCAAGACCTTCCTGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CTRVDRLQPVFSSNS*MLSGWNTIKTFLTV Trigger: CACTGTCAGGAAGGTCTTGATGGTGTTCCAGCCAGACAGCATCCAAGAATTGGAACTAAATACAGGTTGGAGCCTGTCCACTCTGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | ACTAAAGCAATGAGCACACAAGTGAGACATAACAGATGCCCAGGCAAAGGTAAACCTCAGGTCCAGCACTaGGAGCTTCCTCCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TKAMSTQVRHNRCPGKGKPQVQH*ELPPSG Trigger: CCCAGAAGGAGGAAGCTCCAAGTGCTGGACCTGAGG...TTTACCTTTGCCTGGGCATCTGTTATGTCTCACTTGTGTGCTCATTGCTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CCA 90 bp | ACACAGGCAAAGCCCAAATCTGCATCTTCACACAGCATAGCCGTATaGAACTTCTTCTCTGCTGGGCCCACTGTAACAAGTATGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TQAKPKSASSHSIAV*NFFSAGPTVTSMLG Trigger: ACCAAGCATACTTGTTACAGTGGGCCCAGCAGAGAAGAAGTTCCATACGGCTATGCTGTGTGAAGATGCAGATTTGGGCTTTGCCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCATTTTACTACCATGTGAGAAGGAGAAAGTCATTCATTATCATGACCTGCCTCAGGTCCAGCACTaGGAGCTTCCTCCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAILLPCEKEKVIHYHDLPQVQH*ELPPSG Trigger: CCCAGAAGGAGGAAGCTCCAAGTGCTGGACCTGAGG...CAGGTCATGATAATGAATGACTTTCTCCTTCTCACATGGTAGTAAAATGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGCTCAACTGGGGCTGGAGAGATGGTTCAGCAGGCAAGAGCACTTGTTCTTAAGCTCAGGACAAAGTaGGACAAATCTTCCCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KCSTGAGEMVQQARALVLKLRTK*DKSSHK Trigger: CTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCTT...AAGAACAAGTGCTCTTGCCTGCTGAACCATCTCTCCAGCCCCAGTTGAGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS TCA 90 bp | CAGGACGTAAGTCAATCAACTTCACAAGTCTCAGGTTCAGCTGTTTaGGCTGATGGAGGCTCTGACTCTGGGACAAGGAATTCAAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QDVSQSTSQVSGSAV*ADGGSDSGTRNSSL Trigger: TAGACTTGAATTCCTTGTCCCAGAGTCAGAGCCTCCATCAGCTCAAACAGCTGAACCTGAGACTTGTGAAGTTGATTGACTTACGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | CCAAGGATCTGGGAGTTCATTCGTAAAGCTGGAAGTCTCTGCAGTCCAATCTGGTCTAAATGTGAAAGCTaGCACATGGTGATGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRIWEFIRKAGSLCSPIWSKCES*HMVMDR Trigger: TCTGTCCATCACCATGTGCAAGCTTTCACATTTAGA...CCAGATTGGACTGCAGAGACTTCCAGCTTTACGAATGAACTCCCAGATCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | CAACCAGGTTTGCCATTACAGATGTCTAGAGAGGTCAGACAGCACAGGATCTTTTCTAAATGTGAAAGCTaGCACATGGTGATGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPGLPLQMSREVRQHRIFSKCES*HMVMDR Trigger: TCTGTCCATCACCATGTGCAAGCTTTCACATTTAGA...AAAGATCCTGTGCTGTCTGACCTCTCTAGACATCTGTAATGGCAAACCTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | GCTTTGGGTTCTCTTGATGCAAGACCTGTTCCTAGACTTTCATTTCTCAGTATCCCTCAGGACATTAGTTaGTCTGTGATTGAAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGSLDARPVPRLSFLSIPQDIS*SVIEGF Trigger: GAAGCCTTCAATCACAGACAAACTAATGTCCTGAGG...GATACTGAGAAATGAAAGTCTAGGAACAGGTCTTGCATCAAGAGAACCCAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS-3UTR CAA 90 bp | CAATGCCCACATCTGAACTCTATAGGCACCAAGGATACATATATGCAGGTAAACAAGCTCAGGACAAAGTaGGACAAATCTTCCCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: QCPHLNSIGTKDTYMQVNKLRTK*DKSSHK Trigger: CTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCTT...GTTTACCTGCATATATGTATCCTTGGTGCCTATAGAGTTCAGATGTGGGCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS GCA 72 bp | GAGTCCACCATCCAACAGCCCTCCAGTTCTAGGGTCTaGAGGGTGCCTGCAACACTCCTGAGGAGGTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ESTIQQPSSSRV*RVPATLLRRSW Trigger: CCACGACCTCCTCAGGAGTGTTGCAGGCACCCTGCAGACCCTAGAACTGGAGGGCTGTTGGATGGTGGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS CCA 72 bp | GTCTGCAGGGTGCCTGCAACACTCCTGAGGAGGTCGTaGAAAGGCACAGGACGTAAGTCAATCAACTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VCRVPATLLRRS*KGTGRKSINFT Trigger: TGTGAAGTTGATTGACTTACGTCCTGTGCCTTTCCACGACCTCCTCAGGAGTGTTGCAGGCACCCTGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS TCA 72 bp | GCGCTTTGCTATCTGCTTTTCACACACAGTCTCTGCTaGGTGGTCTCCATCCTCTGGTCCAACCCAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ALCYLLFTHSLC*VVSILWSNPNI Trigger: GATGTTTGGGTTGGACCAGAGGATGGAGACCACTCAGCAGAGACTGTGTGTGAAAAGCAGATAGCAAAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
||
| CDS GCA 72 bp | GCACAGGTCAGTGACCACCTTCAAACGTCGCCTCAGTaGATATTGATGAAGGCGCTTTGCTATCTGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQVSDHLQTSPQ*ILMKALCYLLF Trigger: GAAAAGCAGATAGCAAAGCGCCTTCATCAATATGCACTGAGGCGACGTTTGAAGGTGGTCACTGACCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
||
| CDS CCA 72 bp | TTTGCTATCTGCTTTTCACACACAGTCTCTGCTGAGTaGTCTCCATCCTCTGGTCCAACCCAAACATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FAICFSHTVSAE*SPSSGPTQTSQ Trigger: CTGGGATGTTTGGGTTGGACCAGAGGATGGAGACCACTCAGCAGAGACTGTGTGTGAAAAGCAGATAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
||
| CDS CCA 72 bp | AAGCCCAAATCTGCATCTTCACACAGCATAGCCGTATaGAACTTCTTCTCTGCTGGGCCCACTGTAACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KPKSASSHSIAV*NFFSAGPTVTS Trigger: ACTTGTTACAGTGGGCCCAGCAGAGAAGAAGTTCCATACGGCTATGCTGTGTGAAGATGCAGATTTGGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
||
| CDS CAA 72 bp | CTCTGGGACAAGGAATTCAAGTCTAAATGTGAAAGCTaGCACATGGTGATGGACAGAGTCTCCAACGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LWDKEFKSKCES*HMVMDRVSNGV Trigger: GACCCCGTTGGAGACTCTGTCCATCACCATGTGCAAGCTTTCACATTTAGACTTGAATTCCTTGTCCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS CAA 90 bp | GGGCTGCCTTACAGTAATGAGTGTCTCCATAAGCTCAGGACAAAGTaGGACAAATCTTCCCATAAGGACATCACCCGTGTCATCATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLPYSNECLHKLRTK*DKSSHKDITRVIIA Trigger: TGCTATGATGACACGGGTGATGTCCTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCTTATGGAGACACTCATTACTGTAAGGCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
||
| CDS TCA 72 bp | AGGAATTCAAGTCTAAATGTGAAAGCTTGCACATGGTaGTGGACAGAGTCTCCAACGGGGTCTTCAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: RNSSLNVKACTW*WTESPTGSSGT Trigger: GGTACCTGAAGACCCCGTTGGAGACTCTGTCCATCACCATGTGCAAGCTTTCACATTTAGACTTGAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS TCA 72 bp | AGTCAATCAACTTCACAAGTCTCAGGTTCAGCTGTTTaGGCTGATGGAGGCTCTGACTCTGGGACAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SQSTSQVSGSAV*ADGGSDSGTRN Trigger: ATTCCTTGTCCCAGAGTCAGAGCCTCCATCAGCTCAAACAGCTGAACCTGAGACTTGTGAAGTTGATTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CCA 72 bp | GCCCACTGTAACAAGTATGCTTGGTGTTCATTCAAATaGAACCTGAGGCACAGGTCAGTGACCACCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: AHCNKYAWCSFK*NLRHRSVTTFK Trigger: TTTGAAGGTGGTCACTGACCTGTGCCTCAGGTTCCATTTGAATGAACACCAAGCATACTTGTTACAGTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
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| CDS CCA 72 bp | TTCACACAGCATAGCCGTATGGAACTTCTTCTCTGCTaGGCCCACTGTAACAAGTATGCTTGGTGTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: FTQHSRMELLLC*AHCNKYAWCSF Trigger: GAATGAACACCAAGCATACTTGTTACAGTGGGCCCAGCAGAGAAGAAGTTCCATACGGCTATGCTGTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
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| CDS CAA 72 bp | TCAAACGTCGCCTCAGTGCATATTGATGAAGGCGCTTaGCTATCTGCTTTTCACACACAGTCTCTGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SNVASVHIDEGA*LSAFHTQSLLS Trigger: ACTCAGCAGAGACTGTGTGTGAAAAGCAGATAGCAAAGCGCCTTCATCAATATGCACTGAGGCGACGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 ENSMUST00000155157.2 |
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| CDS GCA 72 bp | TGGCAGATATACGTAGCAAAGGAGACATTCTTGGGCTaGCTTACAGTAATGAGTGTCTCCATAAGCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WQIYVAKETFLG*LTVMSVSISSG Trigger: TCCTGAGCTTATGGAGACACTCATTACTGTAAGGCAGCCCAAGAATGTCTCCTTTGCTACGTATATCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CCA 72 bp | CCTGTATTTAGTTCCAATTCTTGGATGCTGTCTGGCTaGAACACCATCAAGACCTTCCTGACAGTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: PVFSSNSWMLSG*NTIKTFLTVYT Trigger: TGTGTACACTGTCAGGAAGGTCTTGATGGTGTTCCAGCCAGACAGCATCCAAGAATTGGAACTAAATACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CCA 72 bp | ACAGTAATGAGTGTCTCCATAAGCTCAGGACAAAGTTaGACAAATCTTCCCATAAGGACATCACCCGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: TVMSVSISSGQS*TNLPIRTSPVS Trigger: TGACACGGGTGATGTCCTTATGGGAAGATTTGTCCAACTTTGTCCTGAGCTTATGGAGACACTCATTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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| CDS CAA 72 bp | CATTCATGGCAGATATACGTAGCAAAGGAGACATTCTaGGGCTGCCTTACAGTAATGAGTGTCTCCATAAGC | + |
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Preference number: 6 (lower is better) Translates to: HSWQIYVAKETF*GCLTVMSVSIS Trigger: GCTTATGGAGACACTCATTACTGTAAGGCAGCCCAAGAATGTCTCCTTTGCTACGTATATCTGCCATGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037356.8 ENSMUST00000059790.11 |
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