Pregenerated sensors for PRAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032739Ensembl transcript IDs: ENSMUST00000052079.8, ENSMUST00000116619.9
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTGGAGCCCGCACTAGCAGAGGGCAGGGAGCATTCAGACACTaGACCAGGAAGCTTGGGCTTTCTAGGCAGACCCTTGGGGAACTC | + |
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Preference number: 1 (lower is better) Translates to: GAGARTSRGQGAFRH*TRKLGLSRQTLGEL Trigger: GAGTTCCCCAAGGGTCTGCCTAGAAAGCCCAAGCTTCCTGGTTCAGTGTCTGAATGCTCCCTGCCCTCTGCTAGTGCGGGCTCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | GTGAACTCGATCACCTCTAGGATCTCTCCACGCCGGATGCCCAGGTaGTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATC | + |
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Preference number: 1 (lower is better) Translates to: VNSITSRISPRRMPR*LPPPRRVLALGSII Trigger: GATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGATCCTAGAGGTGATCGAGTTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | ACTCGATCACCTCTAGGATCTCTCCACGCCGGATGCCCAGGTGCTTaGCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATCT | + |
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Preference number: 1 (lower is better) Translates to: TRSPLGSLHAGCPGA*HPHAGSWHWGQSSS Trigger: AGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGATCCTAGAGGTGATCGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR TCA 90 bp | GCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTaGGCAGTAGCTGGACTGTTGGTCCTGGAACCCACTTATCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: AFGCLFARLGSRAPE*AVAGLLVLEPTYLL Trigger: CAGCAGATAAGTGGGTTCCAGGACCAACAGTCCAGCTACTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
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| 3UTR TCA 90 bp | CTAGGCAGACCCTTGGGGAACTCAGGCTGGAAGAACTTGCCGTGTTaGGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAACTCGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: LGRPLGNSGWKNLPC*GCRNFLGSELNSGS Trigger: GGACCCCGAGTTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTTCCAGCCTGAGTTCCCCAAGGGTCTGCCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | CCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTGGCAGCTGCTGTaGCTGAGTGGCCTTCTTCCTGAGCTCTGGCTCCTGTTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: PDLFQQLGVCSWQLL*LSGLLPELWLLLRP Trigger: TGGCCTCAACAGGAGCCAGAGCTCAGGAAGAAGGCCACTCAGCCACAGCAGCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | CTCCACGCCGGATGCCCAGGTGCTTGCCACCCCCACGCCGGGTCTTaGCATTGGGGTCAATCATCATCTTCGTGTGAATCACAATCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LHAGCPGACHPHAGS*HWGQSSSSCESQSH Trigger: GTGAGATTGTGATTCACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | TTCAGGCTCCGAGGATGCCCTGGTAAGGTCACTTGGCTGGAGCTGTaGATGCTTCTTAGGGAATGCATTGAAGTCTGGCAGCGGGGAGTG | + |
|
Preference number: 1 (lower is better) Translates to: FRLRGCPGKVTWLEL*MLLRECIEVWQRGV Trigger: CACTCCCCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATCCTCGGAGCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | CTTTTCTGCCTTCCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTaGCAGCTGCTGTGGCTGAGTGGCCTTCTTCCTGAGCTCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LFCLPDLFQQLGVCS*QLLWLSGLLPELWL Trigger: GAGCCAGAGCTCAGGAAGAAGGCCACTCAGCCACAGCAGCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | GCCGGATGCCCAGGTGCTTGCCACCCCCACGCCGGGTCTTGGCATTaGGGTCAATCATCATCTTCGTGTGAATCACAATCTCACCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: AGCPGACHPHAGSWH*GQSSSSCESQSHLQ Trigger: TTGAAGGTGAGATTGTGATTCACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | AGCTTGGAAGTGGGTCCCAGTAGAAGAGCCTGTCTTCAGTACCGCTaGGGCTGTTGCTGCGGCTCTCCTGAAGCTTTGGATATTGATGGG | + |
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Preference number: 1 (lower is better) Translates to: SLEVGPSRRACLQYR*GCCCGSPEALDIDG Trigger: CCCATCAATATCCAAAGCTTCAGGAGAGCCGCAGCAACAGCCGCAGCGGTACTGAAGACAGGCTCTTCTACTGGGACCCACTTCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR TCA 90 bp | GGACCCACACTTAGAGGGGGATGTCTGAGAAACTTCGATGGACTCTaGCTGTGGCTGGGACTTCCTAGAGAAACCAACAACAGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GPTLRGGCLRNFDGL*LWLGLPRETNNSLR Trigger: CCTGAGGCTGTTGTTGGTTTCTCTAGGAAGTCCCAGCCACAGTCAGAGTCCATCGAAGTTTCTCAGACATCCCCCTCTAAGTGTGGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | CTTCTGAGTCTTTTTGGGAACCTTGCAGACTTCAGGCTCCGAGGATaGCCTGGTAAGGTCACTTGGCTGGAGCTGTGGATGCTTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LLSLFGNLADFRLRG*PGKVTWLELWMLLR Trigger: CCTAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATCCTCGGAGCCTGAAGTCTGCAAGGTTCCCAAAAAGACTCAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR TCA 90 bp | GGAGGTCTGCAAACTGCAGCTGCAGTGGTTTCAAAGACACTGCACTaGGCTCAGACTGTGAGGACTTCTTGGGCTGCTCACTTAACTCAG | + |
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Preference number: 1 (lower is better) Translates to: GGLQTAAAVVSKTLH*AQTVRTSWAAHLTQ Trigger: CTGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGAAACCACTGCAGCTGCAGTTTGCAGACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CCA 90 bp | CCTAAAGTTCTCATTGTTCTTAGGAAAGGTACTGATGTCAGGCTGTaGGGAGTGAGAGTCAAGCTCCCTGGACCCACACTTAGAGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: PKVLIVLRKGTDVRL*GVRVKLPGPTLRGG Trigger: TCCCCCTCTAAGTGTGGGTCCAGGGAGCTTGACTCTCACTCCCCACAGCCTGACATCAGTACCTTTCCTAAGAACAATGAGAACTTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | GGCCTCCACAGCATCATACAGTTCGTAGATCTCATCCGGGTTCTGTaGAATATGTTGAGGTTGTTGAGCTTGGAAGTGGGTCCCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: GLHSIIQFVDLIRVL*NMLRLLSLEVGPSR Trigger: TCTACTGGGACCCACTTCCAAGCTCAACAACCTCAACATATTGCACAGAACCCGGATGAGATCTACGAACTGTATGATGCTGTGGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | GGAACCCACTTATCTGCTGTTCCATACTGTCACCGAGGAAATGGTTaGATGTCCAGAGGGTCCCCAAAGCTGACGTCATCATATACCTCT | + |
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Preference number: 1 (lower is better) Translates to: GTHLSAVPYCHRGNG*MSRGSPKLTSSYTS Trigger: AGAGGTATATGATGACGTCAGCTTTGGGGACCCTCTGGACATGCAACCATTTCCTCGGTGACAGTATGGAACAGCAGATAAGTGGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR TCA 90 bp | CATGGGCTGCTTTGGGGACTTGGGGCAACCAGTGGCTTGAGGATATaGAGGTTTCCTAAAGTTCTCATTGTTCTTAGGAAAGGTACTGAT | + |
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Preference number: 1 (lower is better) Translates to: HGLLWGLGATSGLRI*RFPKVLIVLRKGTD Trigger: ATCAGTACCTTTCCTAAGAACAATGAGAACTTTAGGAAACCTTCATATCCTCAAGCCACTGGTTGCCCCAAGTCCCCAAAGCAGCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR GCA 90 bp | ACCTTCAAACTTAAACTTCTTTCTAAACTCTCTCTCAGCCTTTTCTaGCTTCCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TFKLKLLSKLSLSLF*LPDLFQQLGVCSWQ Trigger: CTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAAGGCTGAGAGAGAGTTTAGAAAGAAGTTTAAGTTTGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CAA 90 bp | AACTCGATCACCTCTAGGATCTCTCCACGCCGGATGCCCAGGTGCTaGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATC | + |
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Preference number: 2 (lower is better) Translates to: NSITSRISPRRMPRC*PPPRRVLALGSIII Trigger: GATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGATCCTAGAGGTGATCGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAACAGTGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCCGTCGGGGTGGGCGCTaGACTTGGAAGTCTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RATVQFWAHSHTCPWGPGRRGGR*TWKSSD Trigger: ATCAGAAGACTTCCAAGTCCAGCGCCCACCCCGACG...GCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCACTGTTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGGATTGTTAGGCTCGGGCTTCAGGAGCTTCTGGGCAGGAGGAGCACTAGGCACTGAGCTCAGACTGTaGGGACTTCTTGGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: AGLLGSGFRSFWAGGALGTELRL*GLLGLL Trigger: GAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGT...GCCTAGTGCTCCTCCTGCCCAGAAGCTCCTGAAGCCCGAGCCTAACAATCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CAA 90 bp | TCTAGGCAGACCCTTGGGGAACTCAGGCTGGAAGAACTTGCCGTGTaGAGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAACTCGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SRQTLGELRLEELAV*RLQKLPRERVELGV Trigger: GACCCCGAGTTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTTCCAGCCTGAGTTCCCCAAGGGTCTGCCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGCTTTGGGGACTTGGGGCAACCAGTGGCTTGAGGATATGAAGGTTTCCTCAGGCTGTGGGGAGTaGGAGTCAAGCTCCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: WAALGTWGNQWLEDMKVSSGCGE*ESSSLD Trigger: GTCCAGGGAGCTTGACTCTCACTCCCCACAGCCTGA...GGAAACCTTCATATCCTCAAGCCACTGGTTGCCCCAAGTCCCCAAAGCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATCTTCGTGTGGGCTGTGAGGGCTTCTaGGAAAGCACATTGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LATPTPGLGIGVNHHLRVGCEGF*ESTLGS Trigger: AGACCCCAATGTGCTTTCTCAGAAGCCCTCACAGCC...CACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | GGATGCCCAGGTGCTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCTGTGAACTCAGCCTaGGAAGGCTTTTTGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GCPGACHPHAGSWHWGQSSVNSA*EGFLRP Trigger: AGGTCTCAAAAAGCCTTCCCAGGCTGAGTTCACAGA...TGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAACTCGGGGTCCGAGGATGTGTTTTGGGGGCTTCTTaGGGAGGCTGGCAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: LRLQKLPRERVELGVRGCVLGAS*GGWQTG Trigger: CCCAGTTTGCCAGCCTCCCCAAGAAGCCCCCAAAAC...ACATCCTCGGACCCCGAGTTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CAA 90 bp | GGCCTTCTTCCTGAGCTCTGGCTCCTGTTGAGGCCATCTGGTGGCTaGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACT | + |
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Preference number: 2 (lower is better) Translates to: GLLPELWLLLRPSGG*LGRQHFISASGADT Trigger: AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGATGGCCTCAACAGGAGCCAGAGCTCAGGAAGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGCAACAGTGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCTCAAAGACACTGCACTaGGCTCAGACTGTGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: RATVQFWAHSHTCPWGPGSKTLH*AQTVRT Trigger: AGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGA...GCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCACTGTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGGAACTCAGGCTGGAAGAACTTGCCGTGTTGAGGCTGCAGAAACTTCCTGCTGTGGGGGCTTCCTaGGGAGGTCTGCAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LGELRLEELAVLRLQKLPAVGAS*GGLQTA Trigger: TGCAGTTTGCAGACCTCCCCAGGAAGCCCCCACAGC...AGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTTCCAGCCTGAGTTCCCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTAAGAACTCCAGGCTGTaGGGGCTTCCTGGGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SGGLLGRQHFISASGADTKNSRL*GLPGEV Trigger: GACCTCCCCAGGAAGCCCCCACAGCCTGGAGTTCTT...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCAGAGCATCTCTTGGGGTCTGGCTTCTaGGTCTTTTTGGGAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: CSSGHIAILALGVPAEHLLGSGF*VFLGTL Trigger: CAAGGTTCCCAAAAAGACTCAGAAGCCAGACCCCAA...GAGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATCTTCGTGTGTCTGAGAAACTTCGATaGACTCTGACTGTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LATPTPGLGIGVNHHLRVSEKLR*TLTVAG Trigger: CCCAGCCACAGTCAGAGTCCATCGAAGTTTCTCAGA...CACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CAA 90 bp | CTCTTAGGTGCCTCATTGGCCTCAAGGTGCCAAAACATCTTGGGTTaGAGCTCTCCTAGAGGCCTGGCAGGATTGTTAGGCTCGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLGASLASRCQNILG*SSPRGLAGLLGSGF Trigger: GAAGCCCGAGCCTAACAATCCTGCCAGGCCTCTAGGAGAGCTCAAACCCAAGATGTTTTGGCACCTTGAGGCCAATGAGGCACCTAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR CAA 90 bp | AAGGGCCTCTTAGGTGCCTCATTGGCCTCAAGGTGCCAAAACATCTaGGGTTTGAGCTCTCCTAGAGGCCTGGCAGGATTGTTAGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: KGLLGASLASRCQNI*GLSSPRGLAGLLGS Trigger: CGAGCCTAACAATCCTGCCAGGCCTCTAGGAGAGCTCAAACCCAAGATGTTTTGGCACCTTGAGGCCAATGAGGCACCTAAGAGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGCCTTCCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTGGCAGCTGCGGCAAACTGGGGCTGTaGGGGCTTCTTGAGATCTGT | + |
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Preference number: 2 (lower is better) Translates to: FSAFLICFSSLGSVAGSCGKLGL*GLLEIC Trigger: ACAGATCTCAAGAAGCCCCCACAGCCCCAGTTTGCC...GCAGCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | CTTATCTGCTGTTCCATACTGTCACCGAGGAAATGGTTGCATGTCCAGAGGGTCGGCTTCAGGAGCTTCTaGGCAGGAGGAGCACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LICCSILSPRKWLHVQRVGFRSF*AGGALG Trigger: GCCTAGTGCTCCTCCTGCCCAGAAGCTCCTGAAGCC...GACCCTCTGGACATGCAACCATTTCCTCGGTGACAGTATGGAACAGCAGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTGAACATGGGCTGCTTTaGGGACTTGGGGCAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: SGGLLGRQHFISASGADTEHGLL*GLGATS Trigger: ACTGGTTGCCCCAAGTCCCCAAAGCAGCCCATGTTC...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCAGAGCATCTCTCTGCAAACTGCAGCTaGAGTGGTTTCAAAGACACT | + |
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Preference number: 2 (lower is better) Translates to: CSSGHIAILALGVPAEHLSANCS*SGFKDT Trigger: AGTGTCTTTGAAACCACTGCAGCTGCAGTTTGCAGA...GAGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGACTTGGAAGTCTTCTGATCTCCAGCGGGGTATCCCAGGGACTATAAGCACTTGGCTGGAGCTGTaGATGCTTCTTAGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: RWTWKSSDLQRGIPGTISTWLEL*MLLREC Trigger: GCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGT...GCTTATAGTCCCTGGGATACCCCGCTGGAGATCAGAAGACTTCCAAGTCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATCTTCGTGTGAGTGGCTTGAGGATATaGAGGTTTCCTAAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LATPTPGLGIGVNHHLRVSGLRI*RFPKVL Trigger: GAGAACTTTAGGAAACCTTCATATCCTCAAGCCACT...CACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR GCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCGAGGACTTCTTGGGCTaGTCACTTAACTCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YISTCLWVSVCQAGIPGSEDFLG*SLNSVC Trigger: ACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTC...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTACAACAGCCTCAGGCTaGAGTGGCTTCTTGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SGGLLGRQHFISASGADTTTASG*SGFLGK Trigger: TTTTCCCAAGAAGCCACTGCAGCCTGAGGCTGTTGT...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR TCA 90 bp | CTTATCTGCTGTTCCATACTGTCACCGAGGAAATGGTTGCATGTCCAGAGGGTCACCCAATTCTGGCTGTaGGGGCTTCTGAGAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LICCSILSPRKWLHVQRVTQFWL*GLLRKH Trigger: GTGCTTTCTCAGAAGCCCTCACAGCCAGAATTGGGT...GACCCTCTGGACATGCAACCATTTCCTCGGTGACAGTATGGAACAGCAGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTATGCTTCTTAGGGAATaGATTGAAGTCTGGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: SGGLLGRQHFISASGADTMLLRE*IEVWQR Trigger: CCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCAT...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
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| 3UTR-3UTR CCA 90 bp | CTTATCTGCTGTTCCATACTGTCACCGAGGAAATGGTTGCATGTCCAGAGGGTCGAATGCATTGAAGTCTaGCAGCGGGGAGTGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: LICCSILSPRKWLHVQRVECIEV*QRGVRL Trigger: CAGTCTCACTCCCCGCTGCCAGACTTCAATGCATTC...GACCCTCTGGACATGCAACCATTTCCTCGGTGACAGTATGGAACAGCAGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 90 bp | TGTGGGGGCTTCTTGAGATCTGTGAACTCAGCCTGGGAAGGCTTTTaGAGACCTGTGAACTCTGGATGTAGAGGCTTCCTTGGGAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: CGGFLRSVNSAWEGF*RPVNSGCRGFLGNS Trigger: TGAATTCCCAAGGAAGCCTCTACATCCAGAGTTCACAGGTCTCAAAAAGCCTTCCCAGGCTGAGTTCACAGATCTCAAGAAGCCCCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTGCCTTCCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTGGCAGCTGCCTCATCCGGGTTCTGTaGAATATGTTGAGGTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: FSAFLICFSSLGSVAGSCLIRVL*NMLRLL Trigger: CAACAACCTCAACATATTGCACAGAACCCGGATGAG...GCAGCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 90 bp | AGCATCATACAGTTCGTAGATCTCATCCGGGTTCTGTGCAATATGTaGAGGTTGTTGAGCTTGGAAGTGGGTCCCAGTAGAAGAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SIIQFVDLIRVLCNM*RLLSLEVGPSRRAC Trigger: ACAGGCTCTTCTACTGGGACCCACTTCCAAGCTCAACAACCTCAACATATTGCACAGAACCCGGATGAGATCTACGAACTGTATGATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGCTGTGGATGCTTCTTAGGGAATGCATTGAAGTCTGGCAGCGGGGAGTGTTTTATATAAGCACATaGCTTTGGGTGTCTGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LELWMLLRECIEVWQRGVFYIST*LWVSVC Trigger: GCAAACAGACACCCAAAGGCATGTGCTTATATAAAA...CACTCCCCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 90 bp | AGTGGTTTCAAAGACACTGCACTGAGCTCAGACTGTGAGGACTTCTaGGGCTGCTCACTTAACTCAGTCTGTGGAAATTTCTTCAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SGFKDTALSSDCEDF*GCSLNSVCGNFFRT Trigger: AGTCCTGAAGAAATTTCCACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGAAACCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | ATCACCTCTAGGATCTCTCCACGCCGGATGCCCAGGTaGTTGCCACCCCCACGCCGGGTCTTGGCATTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ITSRISPRRMPR*LPPPRRVLALG Trigger: CCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGATCCTAGAGGTGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCAGAGCATCTCCCTTTGGGTGTCTGTTaGCCAGGCTGGGATCCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: CSSGHIAILALGVPAEHLPLGVC*PGWDPG Trigger: CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGG...GAGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCCCAGGTGCTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCAACTGAACCAGGAAGCTaGGGCTTTCTAGGCAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: GCPGACHPHAGSWHWGQSTEPGS*GFLGRP Trigger: GGGTCTGCCTAGAAAGCCCAAGCTTCCTGGTTCAGT...TGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | ACCGCTGCGGCTGTTGCTGCGGCTCTCCTGAAGCTTTaGATATTGATGGGGCCAGGTGGTAGTGCGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TAAAVAAALLKL*ILMGPGGSAGL Trigger: CAAGCCCGCACTACCACCTGGCCCCATCAATATCCAAAGCTTCAGGAGAGCCGCAGCAACAGCCGCAGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CAGCTGCTGTGGCTGAGTGGCCTTCTTCCTGAGCTCTaGCTCCTGTTGAGGCCATCTGGTGGCTTGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QLLWLSGLLPEL*LLLRPSGGLLG Trigger: ACCCAGCAAGCCACCAGATGGCCTCAACAGGAGCCAGAGCTCAGGAAGAAGGCCACTCAGCCACAGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | TGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTaGGCAGTAGCTGGACTGTTGGTCCTGGAACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: CLFARLGSRAPE*AVAGLLVLEPT Trigger: AGTGGGTTCCAGGACCAACAGTCCAGCTACTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | CCAGGCTGTGGGGGCTTCCTGGGGAGGTCTGCAAACTaGAGCTGCAGTGGTTTCAAAGACACTGCACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGCGGFLGRSAN*SCSGFKDTALS Trigger: GCTCAGTGCAGTGTCTTTGAAACCACTGCAGCTGCAGTTTGCAGACCTCCCCAGGAAGCCCCCACAGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | TTCAGGAGCTTCTGGGCAGGAGGAGCACTAGGCTCCTaGGGTGTCTCAAGCTGTGGAGGTCTCTTGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FRSFWAGGALGS*GVSSCGGLLES Trigger: GCTCTCCAAGAGACCTCCACAGCTTGAGACACCCCAGGAGCCTAGTGCTCCTCCTGCCCAGAAGCTCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCAACAGTGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCCGCCGGGTCTTGGCATaGGGGTCAATCATCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RATVQFWAHSHTCPWGPGRRVLA*GSIIIF Trigger: GAAGATGATGATTGACCCCAATGCCAAGACCCGGCG...GCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCACTGTTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTAGAACATGGGCTGCTTaGGGGACTTGGGGCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPSGGLLGRQHFISASGARTWAA*GTWGNQ Trigger: CTGGTTGCCCCAAGTCCCCAAAGCAGCCCATGTTCT...AGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGATGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCAGAGCATCTCTTTCTAGGCAGACCCTaGGGGAACTCAGGCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSGHIAILALGVPAEHLFLGRP*GNSGWK Trigger: CTTCCAGCCTGAGTTCCCCAAGGGTCTGCCTAGAAA...GAGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | GCCCGCACTAGCAGAGGGCAGGGAGCATTCAGACACTaGACCAGGAAGCTTGGGCTTTCTAGGCAGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ARTSRGQGAFRH*TRKLGLSRQTL Trigger: AAGGGTCTGCCTAGAAAGCCCAAGCTTCCTGGTTCAGTGTCTGAATGCTCCCTGCCCTCTGCTAGTGCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | GTGGGTCCCAGTAGAAGAGCCTGTCTTCAGTACCGCTaGGGCTGTTGCTGCGGCTCTCCTGAAGCTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGPSRRACLQYR*GCCCGSPEALD Trigger: ATCCAAAGCTTCAGGAGAGCCGCAGCAACAGCCGCAGCGGTACTGAAGACAGGCTCTTCTACTGGGACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | GGATGCCCAGGTGCTTGCCACCCCCACGCCGGGTCTTaGCATTGGGGTCAATCATCATCTTCGTGTGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GCPGACHPHAGS*HWGQSSSSCES Trigger: TGATTCACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGCTGTGGATGCTTCTTAGGGAATGCATTGAAGTCTGGCAGCGGGGAGTGCTCCAAACTCAGGTTTaGGGGGCTTCTTGGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LELWMLLRECIEVWQRGVLQTQV*GASWGG Trigger: GCCTCCCCAAGAAGCCCCCAAAACCTGAGTTTGGAG...CACTCCCCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | CCCTTGGGGAACTCAGGCTGGAAGAACTTGCCGTGTTaGGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLGNSGWKNLPC*GCRNFLGSELN Trigger: GTTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTTCCAGCCTGAGTTCCCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | TGTGGGGGCTTCCTGGGGAGGTCTGCAAACTGCAGCTaGAGTGGTTTCAAAGACACTGCACTGAGCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CGGFLGRSANCS*SGFKDTALSSD Trigger: GTCTGAGCTCAGTGCAGTGTCTTTGAAACCACTGCAGCTGCAGTTTGCAGACCTCCCCAGGAAGCCCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | AGAAGAGCCTGTCTTCAGTACCGCTGCGGCTGTTGCTaGGGCTCTCCTGAAGCTTTGGATATTGATGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RRACLQYRCGCC*GSPEALDIDGA Trigger: GGCCCCATCAATATCCAAAGCTTCAGGAGAGCCGCAGCAACAGCCGCAGCGGTACTGAAGACAGGCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CTTCCTGATCTGTTTCAGCAGCTTGGGGTCTGTAGCTaGCAGCTGCTGTGGCTGAGTGGCCTTCTTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPDLFQQLGVCS*QLLWLSGLLPE Trigger: CTCAGGAAGAAGGCCACTCAGCCACAGCAGCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | GGCAAGGGCCTCTTAGGTGCCTCATTGGCCTCAAGGTaGCAAAACATCTTGGGTTTGAGCTCTCCTAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKGLLGASLASR*QNILGLSSPRG Trigger: GCCTCTAGGAGAGCTCAAACCCAAGATGTTTTGGCACCTTGAGGCCAATGAGGCACCTAAGAGGCCCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | GATGCCCTGGTAAGGTCACTTGGCTGGAGCTGTGGATaGTTCTTAGGGAATGCATTGAAGTCTGGCAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: DALVRSLGWSCG*FLGNALKSGSG Trigger: CCCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | CTTTTTGGGAACCTTGCAGACTTCAGGCTCCGAGGATaGCCTGGTAAGGTCACTTGGCTGGAGCTGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LFGNLADFRLRG*PGKVTWLELWM Trigger: CATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATCCTCGGAGCCTGAAGTCTGCAAGGTTCCCAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | AGGAGGAGCACTAGGCTCCTGGGGTGTCTCAAGCTGTaGAGGTCTCTTGGAGAGCTCTCCAAACTCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RRSTRLLGCLKL*RSLGELSKLRF Trigger: AAACCTGAGTTTGGAGAGCTCTCCAAGAGACCTCCACAGCTTGAGACACCCCAGGAGCCTAGTGCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CCAGGTGCTTGCCACCCCCACGCCGGGTCTTGGCATTaGGGTCAATCATCATCTTCGTGTGAATCACAATCT | + |
|
Preference number: 3 (lower is better) Translates to: PGACHPHAGSWH*GQSSSSCESQS Trigger: AGATTGTGATTCACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CATATACCTCTGTTTCCAAGGGCAACAGTGCAGTTCTaGGCACATAGCCATACTTGCCCTTGGGGTCCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: HIPLFPRATVQF*AHSHTCPWGPG Trigger: GCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCACTGTTGCCCTTGGAAACAGAGGTATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAACTCGGGGTCCGAGGATGTGGCTGCAGTGGCTTCTaGGGAAAAGTACTGGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRLQKLPRERVELGVRGCGCSGF*GKVLDS Trigger: TGAATCCAGTACTTTTCCCAAGAAGCCACTGCAGCC...ACATCCTCGGACCCCGAGTTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGTTCTGGGCACATAGCCATACTTGCCCTTGGGGTCCCGGCAGAGCATCTCAATATGTTGAGGTTGTaGAGCTTGGAAGTGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSSGHIAILALGVPAEHLNMLRL*SLEVGP Trigger: GGGACCCACTTCCAAGCTCAACAACCTCAACATATT...GAGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | TTCTTAGGAAAGGTACTGATGTCAGGCTGTGGGGAGTaGGAGTCAAGCTCCCTGGACCCACACTTAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLGKVLMSGCGE*ESSSLDPHLEG Trigger: CCCCTCTAAGTGTGGGTCCAGGGAGCTTGACTCTCACTCCCCACAGCCTGACATCAGTACCTTTCCTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | GGGGGAACTCATAGAACATGGGCTGCTTTGGGGACTTaGGGCAACCAGTGGCTTGAGGATATGAAGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGTHRTWAALGT*GNQWLEDMKVS Trigger: GGAAACCTTCATATCCTCAAGCCACTGGTTGCCCCAAGTCCCCAAAGCAGCCCATGTTCTATGAGTTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | TCAGGCTCCGAGGATGCCCTGGTAAGGTCACTTGGCTaGAGCTGTGGATGCTTCTTAGGGAATGCATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSEDALVRSLG*SCGCFLGNALK Trigger: CTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATCCTCGGAGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | GACTTCAGGCTCCGAGGATGCCCTGGTAAGGTCACTTaGCTGGAGCTGTGGATGCTTCTTAGGGAATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: DFRLRGCPGKVT*LELWMLLRECI Trigger: AATGCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTACCAGGGCATCCTCGGAGCCTGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGCTGTGGATGCTTCTTAGGGAATGCATTGAAGTCTGGCAGCGGGGAGTGGATGTAGAGGCTTCCTaGGGAATTCAGCCTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LELWMLLRECIEVWQRGVDVEAS*GIQPVQ Trigger: CTGTACAGGCTGAATTCCCAAGGAAGCCTCTACATC...CACTCCCCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCATCCACAGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTGCCTGGGAAGGCTTTTaGAGACCTGTGAACTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGGLLGRQHFISASGADTAWEGF*RPVNSG Trigger: TCCAGAGTTCACAGGTCTCAAAAAGCCTTCCCAGGC...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | CAAACTGCAGCTGCAGTGGTTTCAAAGACACTGCACTaGGCTCAGACTGTGAGGACTTCTTGGGCTGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QTAAAVVSKTLH*AQTVRTSWAAH Trigger: GTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGAAACCACTGCAGCTGCAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | GGCTGTGGGGGCTTCTTGAGATCTGTGAACTCAGCCTaGGAAGGCTTTTTGAGACCTGTGAACTCTGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: GCGGFLRSVNSA*EGFLRPVNSGC Trigger: ACATCCAGAGTTCACAGGTCTCAAAAAGCCTTCCCAGGCTGAGTTCACAGATCTCAAGAAGCCCCCACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CTGCAGTGGCTTCTTGGGAAAAGTACTGGATTCAGATaGCAAGGGCCTCTTAGGTGCCTCATTGGCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQWLLGKSTGFR*QGPLRCLIGLK Trigger: CTTGAGGCCAATGAGGCACCTAAGAGGCCCTTGCCATCTGAATCCAGTACTTTTCCCAAGAAGCCACTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTTGCAATATGTTGAGGTaGTTGAGCTTGGAAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RPSGGLLGRQHFISASGACNMLR*LSLEVG Trigger: ACCCACTTCCAAGCTCAACAACCTCAACATATTGCA...AGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGATGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAAACATCTTGGGTTTGAGCTCTCCTAGAGGCCTGGCAGGATTGTTAGGCGACTGTGAGGACTTCTaGGGCTGCTCACTTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: CQNILGLSSPRGLAGLLGDCEDF*GCSLNS Trigger: TGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTC...GCCTAACAATCCTGCCAGGCCTCTAGGAGAGCTCAAACCCAAGATGTTTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTATCTGCTGTTCCATACTGTCACCGAGGAAATGGTTGCATGTCCAGAGGGTCCTCTTAGGTGCCTCATaGGCCTCAAGGTGCCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LICCSILSPRKWLHVQRVLLGAS*ASRCQN Trigger: GTTTTGGCACCTTGAGGCCAATGAGGCACCTAAGAG...GACCCTCTGGACATGCAACCATTTCCTCGGTGACAGTATGGAACAGCAGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | GACGTCATCATATACCTCTGTTTCCAAGGGCAACAGTaGAGTTCTGGGCACATAGCCATACTTGCCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DVIIYLCFQGQQ*SSGHIAILALG Trigger: CCCAAGGGCAAGTATGGCTATGTGCCCAGAACTGCACTGTTGCCCTTGGAAACAGAGGTATATGATGACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CCA 72 bp | CCAATTCTGGCTGTGAGGGCTTCTGAGAAAGCACATTaGGGTCTGGCTTCTGAGTCTTTTTGGGAACCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PILAVRASEKAH*GLASESFWEPC Trigger: GCAAGGTTCCCAAAAAGACTCAGAAGCCAGACCCCAATGTGCTTTCTCAGAAGCCCTCACAGCCAGAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | CTTAGAGGGGGATGTCTGAGAAACTTCGATGGACTCTaGCTGTGGCTGGGACTTCCTAGAGAAACCAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRGGCLRNFDGL*LWLGLPRETNN Trigger: GTTGTTGGTTTCTCTAGGAAGTCCCAGCCACAGTCAGAGTCCATCGAAGTTTCTCAGACATCCCCCTCTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | GAGGAAATGGTTGCATGTCCAGAGGGTCCCCAAAGCTaGCGTCATCATATACCTCTGTTTCCAAGGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: EEMVACPEGPQS*RHHIPLFPRAT Trigger: TGTTGCCCTTGGAAACAGAGGTATATGATGACGTCAGCTTTGGGGACCCTCTGGACATGCAACCATTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | ATGGGCTGCTTTGGGGACTTGGGGCAACCAGTGGCTTaGGGATATGAAGGTTTCCTAAAGTTCTCATTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MGCFGDLGQPVA*GYEGFLKFSLF Trigger: GAACAATGAGAACTTTAGGAAACCTTCATATCCTCAAGCCACTGGTTGCCCCAAGTCCCCAAAGCAGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | ACTGCACTGAGCTCAGACTGTGAGGACTTCTTGGGCTaGTCACTTAACTCAGTCTGTGGAAATTTCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TALSSDCEDFLG*SLNSVCGNFFR Trigger: CCTGAAGAAATTTCCACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | TGGGACTTCCTAGAGAAACCAACAACAGCCTCAGGCTaGAGTGGCTTCTTGGGAAAAGTACTGGATTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WDFLEKPTTASG*SGFLGKVLDSD Trigger: ATCTGAATCCAGTACTTTTCCCAAGAAGCCACTGCAGCCTGAGGCTGTTGTTGGTTTCTCTAGGAAGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR GCA 72 bp | AGCATCATACAGTTCGTAGATCTCATCCGGGTTCTGTaGAATATGTTGAGGTTGTTGAGCTTGGAAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SIIQFVDLIRVL*NMLRLLSLEVG Trigger: ACCCACTTCCAAGCTCAACAACCTCAACATATTGCACAGAACCCGGATGAGATCTACGAACTGTATGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR TCA 72 bp | CGGGTCTTGGCATTGGGGTCAATCATCATCTTCGTGTaGATCACAATCTCACCTTCAAACTTAAACTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RVLALGSIIIFV*ITISPSNLNFF Trigger: AAAGAAGTTTAAGTTTGAAGGTGAGATTGTGATTCACACGAAGATGATGATTGACCCCAATGCCAAGACCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 72 bp | ACCTCTAGGATCTCTCCACGCCGGATGCCCAGGTGCTaGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSRISPRRMPRC*PPPRRVLALGS Trigger: TGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGATCCTAGAGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR GCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTTCTCTCCACGCCGGATaGCCAGGTGCTTGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSSLHAG*PGACHP Trigger: GGGGTGGCAAGCACCTGGGCATCCGGCGTGGAGAGA...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | GCGGCTGTTGCTGCGGCTCTCCTGAAGCTTTGGATATaGATGGGGCCAGGTGGTAGTGCGGGCTTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVAAALLKLWI*MGPGGSAGLAG Trigger: CCCAGCCAAGCCCGCACTACCACCTGGCCCCATCAATATCCAAAGCTTCAGGAGAGCCGCAGCAACAGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR GCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCGGATGCCCAGGTGCTTaGCACCCCCACGCCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSGCPGA*HPHAGS Trigger: AGACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCC...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGGGAGGCTGGCAAACTaGGGCTGTGGGGGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLGRLAN*GCGGFL Trigger: CAAGAAGCCCCCACAGCCCCAGTTTGCCAGCCTCCC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGGTTTTGGGGGCTTCTTaGGGAGGCTGGCAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQVLGAS*GGWQTG Trigger: CCCAGTTTGCCAGCCTCCCCAAGAAGCCCCCAAAAC...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGGCTTCAGGAGCTTCTaGGCAGGAGGAGCACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSGFRSF*AGGALG Trigger: GCCTAGTGCTCCTCCTGCCCAGAAGCTCCTGAAGCC...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGCGTCGGGGTGGGCGCTaGACTTGGAAGTCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQRRGGR*TWKSSD Trigger: ATCAGAAGACTTCCAAGTCCAGCGCCCACCCCGACG...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTCCTCGGGAGCGAGTTaGACTCGGGGTCCGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSSSGAS*TRGPRM Trigger: CATCCTCGGACCCCGAGTTCAACTCGCTCCCGAGGA...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGTGGCCTTCTTCCTaGGCTCTGGCTCCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSEWPSS*ALAPVE Trigger: CTCAACAGGAGCCAGAGCTCAGGAAGAAGGCCACTC...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGCGCTGCGGCTGTTGCTaGGGCTCTCCTGAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLRCGCC*GSPEAL Trigger: CAAAGCTTCAGGAGAGCCGCAGCAACAGCCGCAGCG...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGGAACATGGGCTGCTTTaGGGACTTGGGGCAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQEHGLL*GLGATS Trigger: ACTGGTTGCCCCAAGTCCCCAAAGCAGCCCATGTTC...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTAGCCATACTTGCCCTTaGGGTCCCGGCAGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSSHTCP*GPGRAS Trigger: AGATGCTCTGCCGGGACCCCAAGGGCAAGTATGGCT...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTCTGGCAGCGGGGAGTaGGACTGGGGGTTACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSSGSGE*DWGLHD Trigger: GTCATGTAACCCCCAGTCTCACTCCCCGCTGCCAGA...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGCGCCGGATGCCCAGGTaGTTGCCACCCCCACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KEEFYISTCLWVSVCQAGRRMPR*LPPPRR Trigger: CCGGCGTGGGGGTGGCAAGCACCTGGGCATCCGGCG...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGCACATAGCCATACTTaGCCTTGGGGTCCCGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLAHSHT*PWGPGR Trigger: TCTGCCGGGACCCCAAGGGCAAGTATGGCTATGTGC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGGCAAACTGGGGCTGTaGGGGCTTCTTGAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSGKLGL*GLLEIC Trigger: ACAGATCTCAAGAAGCCCCCACAGCCCCAGTTTGCC...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGGCCGGGTCTTGGCATTaGGGTCAATCATCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQAGSWH*GQSSSS Trigger: CGAAGATGATGATTGACCCCAATGCCAAGACCCGGC...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | GAGGGCAGGGAGCATTCAGACACTGAACCAGGAAGCTaGGGCTTTCTAGGCAGACCCTTGGGGAACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGREHSDTEPGS*GFLGRPLGNSG Trigger: GCCTGAGTTCCCCAAGGGTCTGCCTAGAAAGCCCAAGCTTCCTGGTTCAGTGTCTGAATGCTCCCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 72 bp | CCTGAGCTCTGGCTCCTGTTGAGGCCATCTGGTGGCTaGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PELWLLLRPSGG*LGRQHFISASG Trigger: CCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGATGGCCTCAACAGGAGCCAGAGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 72 bp | TGGCTGAGTGGCCTTCTTCCTGAGCTCTGGCTCCTGTaGAGGCCATCTGGTGGCTTGCTGGGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLSGLLPELWLL*RPSGGLLGRQH Trigger: ATGCTGTCTACCCAGCAAGCCACCAGATGGCCTCAACAGGAGCCAGAGCTCAGGAAGAAGGCCACTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR CCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGGGTGTCTCAAGCTGTaGAGGTCTCTTGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLGCLKL*RSLGEL Trigger: GAGCTCTCCAAGAGACCTCCACAGCTTGAGACACCC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | ATCTTGGGTTTGAGCTCTCCTAGAGGCCTGGCAGGATaGTTAGGCTCGGGCTTCAGGAGCTTCTGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGLSSPRGLAG*LGSGFRSFWAG Trigger: TCCTGCCCAGAAGCTCCTGAAGCCCGAGCCTAACAATCCTGCCAGGCCTCTAGGAGAGCTCAAACCCAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGTCAGGCTGTGGGGAGTaGGAGTCAAGCTCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGSGCGE*ESSSLD Trigger: GTCCAGGGAGCTTGACTCTCACTCCCCACAGCCTGA...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGTTCCAAGGGCAACAGTaGAGTTCTGGGCACATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLFQGQQ*SSGHIA Trigger: GGCTATGTGCCCAGAACTGCACTGTTGCCCTTGGAA...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCCACCGAGGAAATGGTTaGATGTCCAGAGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSHRGNG*MSRGSP Trigger: TGGGGACCCTCTGGACATGCAACCATTTCCTCGGTG...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGAAGAACTCCAGGCTGTaGGGGCTTCCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGKNSRL*GLPGEV Trigger: GACCTCCCCAGGAAGCCCCCACAGCCTGGAGTTCTT...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTACTTGGCTGGAGCTGTaGATGCTTCTTAGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSTWLEL*MLLREC Trigger: GCATTCCCTAAGAAGCATCCACAGCTCCAGCCAAGT...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGCATCTGGTGGCTTGCTaGGTAGACAGCATTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQHLVAC*VDSISS Trigger: AGATGAAATGCTGTCTACCCAGCAAGCCACCAGATG...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | ACCCTTGGGGAACTCAGGCTGGAAGAACTTGCCGTGTaGAGGCTGCAGAAACTTCCTCGGGAGCGAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLGELRLEELAV*RLQKLPRERVE Trigger: TTCAACTCGCTCCCGAGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTTCCAGCCTGAGTTCCCCAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTTCTCCAAGTTCTGGCTaGGAGGTTTGGAACTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSSPSSG*EVWNLA Trigger: AGCTAAGTTCCAAACCTCTCAGCCAGAACTTGGAGA...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGTCAAAGACACTGCACTaGGCTCAGACTGTGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLSKTLH*AQTVRT Trigger: AGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGA...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAAGAACTTGCCGTGTTaGGGCTGCAGAAACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLKNLPC*GCRNFL Trigger: GAGGAAGTTTCTGCAGCCTCAACACGGCAAGTTCTT...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGCTCATCCGGGTTCTGTaGAATATGTTGAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQLIRVL*NMLRLL Trigger: CAACAACCTCAACATATTGCACAGAACCCGGATGAG...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCCTTGGGGTCTGTAGCTaGCAGCTGCTGTGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGLGVCS*QLLWLS Trigger: ACTCAGCCACAGCAGCTGCCAGCTACAGACCCCAAG...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | TACTTGCCCTTGGGGTCCCGGCAGAGCATCTCATCCTaGCTAGTGAACTCGATCACCTCTAGGATCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLGSRQSISS*LVNSITSRISP Trigger: TGGAGAGATCCTAGAGGTGATCGAGTTCACTAGCAAGGATGAGATGCTCTGCCGGGACCCCAAGGGCAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCACTGAGCTCAGACTGTaGGGACTTCTTGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGTELRL*GLLGLL Trigger: GAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGT...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGGCTTGTTGGCTAGATaGGGGAACTCAGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGGLLAR*GNSGCG Trigger: ACCACAGCCTGAGTTCCCTCATCTAGCCAACAAGCC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTTGGGGTCTGGCTTCTaGGTCTTTTTGGGAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSLGSGF*VFLGTL Trigger: CAAGGTTCCCAAAAAGACTCAGAAGCCAGACCCCAA...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGGCTGTGAGGGCTTCTaGGAAAGCACATTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGGCEGF*ESTLGS Trigger: AGACCCCAATGTGCTTTCTCAGAAGCCCTCACAGCC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGATACTGATTGCTCCCCTGAATaGACTTCCAATGGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGLLGRQHFISASGADTDCSPE*TSNGGL Trigger: CAAGCCCCCATTGGAAGTTCATTCAGGGGAGCAATC...AGTATCAGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR GCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGAGGACTTCTTGGGCTaGTCACTTAACTCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLEDFLG*SLNSVC Trigger: ACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCACCCCCACGCCGGGTCTTGGCATTGGGGTCAATCATCATCTTCGTGTGCAGTTCTCCAAGTTCTaGCTGAGAGGTTTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LATPTPGLGIGVNHHLRVQFSKF*LRGLEL Trigger: AAGTTCCAAACCTCTCAGCCAGAACTTGGAGAACTG...CACACGAAGATGATGATTGACCCCAATGCCAAGACCCGGCGTGGGGGTGGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR CCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGTAAGGTCACTTGGCTaGAGCTGTGGATGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLVRSLG*SCGCFL Trigger: TAAGAAGCATCCACAGCTCCAGCCAAGTGACCTTAC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | TTAGGTGCCTCATTGGCCTCAAGGTGCCAAAACATCTaGGGTTTGAGCTCTCCTAGAGGCCTGGCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGASLASRCQNI*GLSSPRGLAGL Trigger: CAATCCTGCCAGGCCTCTAGGAGAGCTCAAACCCAAGATGTTTTGGCACCTTGAGGCCAATGAGGCACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| 3UTR CAA 72 bp | GAGAAACCAACAACAGCCTCAGGCTGCAGTGGCTTCTaGGGAAAAGTACTGGATTCAGATGGCAAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTTASGCSGF*GKVLDSDGKGL Trigger: GAGGCCCTTGCCATCTGAATCCAGTACTTTTCCCAAGAAGCCACTGCAGCCTGAGGCTGTTGTTGGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCATCTGGTGGCTTGCTGGGTAGACAGCATTTCATCTCTGCCTCTGGGGCTGCTTTGGGGTTTTTCTaGACAGTTCTCCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGGLLGRQHFISASGAALGFF*TVLQVL Trigger: CAGAACTTGGAGAACTGTTCAGAAAAACCCCAAAGC...AGCCCCAGAGGCAGAGATGAAATGCTGTCTACCCAGCAAGCCACCAGATGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCACCCAATTCTGGCTGTaGGGGCTTCTGAGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGTQFWL*GLLRKH Trigger: GTGCTTTCTCAGAAGCCCTCACAGCCAGAATTGGGT...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGATGTTCTAGGGAGGTaGCCCAATTCTGGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGDVLGR*PNSGCE Trigger: CTCACAGCCAGAATTGGGTCACCTCCCTAGAACATC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCATGCTTCTTAGGGAATaGATTGAAGTCTGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YISTCLWVSVCQAGIPGSMLLRE*IEVWQR Trigger: CCGCTGCCAGACTTCAATGCATTCCCTAAGAAGCAT...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGGCTGTGGGGGCTTCCTaGGGAGGTCTGCAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEEFYISTCLWVSVCQAGAVGAS*GGLQTA Trigger: TGCAGTTTGCAGACCTCCCCAGGAAGCCCCCACAGC...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGAATGCATTGAAGTCTaGCAGCGGGGAGTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGECIEV*QRGVRL Trigger: CAGTCTCACTCCCCGCTGCCAGACTTCAATGCATTC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCCTTCTTCCTGAGCTCTaGCTCCTGTTGAGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGLLPEL*LLLRPS Trigger: AGATGGCCTCAACAGGAGCCAGAGCTCAGGAAGAAG...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGGCTTGAGGATATaGAGGTTTCCTAAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLSGLRI*RFPKVL Trigger: GAGAACTTTAGGAAACCTTCATATCCTCAAGCCACT...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCCTTTTCTGCCTTCCTaGTCTGTTTCAGCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGPFLPS*SVSAAW Trigger: CCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAAGG...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCACAACAGCCTCAGGCTaGAGTGGCTTCTTGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGTTASG*SGFLGK Trigger: TTTTCCCAAGAAGCCACTGCAGCCTGAGGCTGTTGT...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGGCTGGAGCTGTGGATaGTTCTTAGGGAATGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGGWSCG*FLGNAL Trigger: CAATGCATTCCCTAAGAAGCATCCACAGCTCCAGCC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGTCTGAGAAACTTCGATaGACTCTGACTGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGSEKLR*TLTVAG Trigger: CCCAGCCACAGTCAGAGTCCATCGAAGTTTCTCAGA...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCTTGGGAAAAGTACTaGATTCAGATGGCAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGSWEKY*IQMARA Trigger: GGCCCTTGCCATCTGAATCCAGTACTTTTCCCAAGA...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGCTGCAGTGGCTTCTTaGGAAAAGTACTGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGAAVAS*EKYWIQ Trigger: CTGAATCCAGTACTTTTCCCAAGAAGCCACTGCAGC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGACTTGGGGCAACCAGTaGCTTGAGGATATGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGTWGNQ*LEDMKV Trigger: AACCTTCATATCCTCAAGCCACTGGTTGCCCCAAGT...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | GTAGATCTCATCCGGGTTCTGTGCAATATGTTGAGGTaGTTGAGCTTGGAAGTGGGTCCCAGTAGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VDLIRVLCNMLR*LSLEVGPSRRA Trigger: GGCTCTTCTACTGGGACCCACTTCCAAGCTCAACAACCTCAACATATTGCACAGAACCCGGATGAGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCTGCAAACTGCAGCTaGAGTGGTTTCAAAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGSANCS*SGFKDT Trigger: AGTGTCTTTGAAACCACTGCAGCTGCAGTTTGCAGA...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCAGTTCTCCAAGTTCTaGCTGAGAGGTTTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGQFSKF*LRGLEL Trigger: AAGTTCCAAACCTCTCAGCCAGAACTTGGAGAACTG...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCAAACTGCAGCTGCAGTaGTTTCAAAGACACTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FYISTCLWVSVCQAGIPGKLQLQ*FQRHCT Trigger: AGTGCAGTGTCTTTGAAACCACTGCAGCTGCAGTTT...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGGAACTCAGGCTGTGGTaGCTTTTTAAGAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEEFYISTCLWVSVCQAGELRLW*LFKNSR Trigger: CCTGGAGTTCTTAAAAAGTCACCACAGCCTGAGTTC...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGATCATCATCTTCGTGTaGATCACAATCTCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGIIIFV*ITISPS Trigger: TGAAGGTGAGATTGTGATTCACACGAAGATGATGAT...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| 3UTR CAA 72 bp | AAAGACACTGCACTGAGCTCAGACTGTGAGGACTTCTaGGGCTGCTCACTTAACTCAGTCTGTGGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDTALSSDCEDF*GCSLNSVCGNF Trigger: GAAATTTCCACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116619.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGGCTTTGGGGTTTTTCTaGACAGTTCTCCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEEFYISTCLWVSVCQAGALGFF*TVLQVL Trigger: CAGAACTTGGAGAACTGTTCAGAAAAACCCCAAAGC...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTTCTGTGAACTCAGCCTaGGAAGGCTTTTTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEEFYISTCLWVSVCQASVNSA*EGFLRP Trigger: AGGTCTCAAAAAGCCTTCCCAGGCTGAGTTCACAGA...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTTCTGAGAAAGCACATTaGGGTCTGGCTTCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKEEFYISTCLWVSVCQASEKAH*GLASES Trigger: AGACTCAGAAGCCAGACCCCAATGTGCTTTCTCAGA...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTCGGATGCCCAGGTGCTaGCCACCCCCACGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSRMPRC*PPPRRV Trigger: GACCCGGCGTGGGGGTGGCAAGCACCTGGGCATCCG...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGAGCAGCGCCGGGTCTTGGCATaGGGGTCAATCATCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MPLGVCLPGWDPGLLSEQRRVLA*GSIIIF Trigger: GAAGATGATGATTGACCCCAATGCCAAGACCCGGCG...CTGCTCACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTATCTGTTTCAGCAGCTaGGGGTCTGTAGCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSICFSS*GSVAGS Trigger: GCTGCCAGCTACAGACCCCAAGCTGCTGAAACAGAT...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTCTCTTAGGTGCCTCATaGGCCTCAAGGTGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSLLGAS*ASRCQN Trigger: GTTTTGGCACCTTGAGGCCAATGAGGCACCTAAGAG...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGACTGAACCAGGAAGCTaGGGCTTTCTAGGCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLTEPGS*GFLGRP Trigger: GGGTCTGCCTAGAAAGCCCAAGCTTCCTGGTTCAGT...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGGATGTAGAGGCTTCCTaGGGAATTCAGCCTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: YKHMPLGVCLPGWDPGLLDVEAS*GIQPVQ Trigger: CTGTACAGGCTGAATTCCCAAGGAAGCCTCTACATC...CAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCACCGAGGAAATGGTaGCATGTCCAGAGGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FYISTCLWVSVCQAGIPGSPRKW*HVQRVP Trigger: GGGGACCCTCTGGACATGCAACCATTTCCTCGGTGA...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCGCCTGGGAAGGCTTTTaGAGACCTGTGAACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FYISTCLWVSVCQAGIPGAWEGF*RPVNSG Trigger: TCCAGAGTTCACAGGTCTCAAAAAGCCTTCCCAGGC...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGTTCTTAGGGAATGCATaGAAGTCTGGCAGCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGFLGNA*KSGSGE Trigger: CTCCCCGCTGCCAGACTTCAATGCATTCCCTAAGAA...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTGAGTGTTCTGTGCAATATGTaGAGGTTGTTGAGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KHMPLGVCLPGWDPGLLSVLCNM*RLLSLE Trigger: TTCCAAGCTCAACAACCTCAACATATTGCACAGAAC...ACTCAGGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGGAGCTCTGGCTCCTGTaGAGGCCATCTGGTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEEFYISTCLWVSVCQAGELWLL*RPSGGL Trigger: CAAGCCACCAGATGGCCTCAACAGGAGCCAGAGCTC...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCCAAAACATCTTGGGTTaGAGCTCTCCTAGAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FYISTCLWVSVCQAGIPGQNILG*SSPRGL Trigger: CAGGCCTCTAGGAGAGCTCAAACCCAAGATGTTTTG...GCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGGGCTGCAGTGGCTTCTaGGGAAAAGTACTGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGGCSGF*GKVLDS Trigger: TGAATCCAGTACTTTTCCCAAGAAGCCACTGCAGCC...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCAGAGCATCTCATCCTaGCTAGTGAACTCGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGQSISS*LVNSIT Trigger: GGTGATCGAGTTCACTAGCAAGGATGAGATGCTCTG...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGTGCAATATGTTGAGGTaGTTGAGCTTGGAAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKHMPLGVCLPGWDPGCNMLR*LSLEVG Trigger: ACCCACTTCCAAGCTCAACAACCTCAACATATTGCA...CCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGGACTGTGAGGACTTCTaGGGCTGCTCACTTAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEEFYISTCLWVSVCQAGDCEDF*GCSLNS Trigger: TGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTC...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGCTGTGGGGGCTTCTaGAGATCTGTGAACTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKEEFYISTCLWVSVCQAGCGGF*RSVNSA Trigger: GGCTGAGTTCACAGATCTCAAGAAGCCCCCACAGCC...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTCTCCAAACTCAGGTTTaGGGGGCTTCTTGGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FKEEFYISTCLWVSVCQALQTQV*GASWGG Trigger: GCCTCCCCAAGAAGCCCCCAAAACCTGAGTTTGGAG...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
||
| CDS-3UTR CAA 90 bp | TATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGATCCCGGGCTCCTTCCTAAAGTTCTCATaGTTCTTAGGAAAGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: YISTCLWVSVCQAGIPGSFLKFS*FLGKVL Trigger: CAGTACCTTTCCTAAGAACAATGAGAACTTTAGGAA...GGAGCCCGGGATCCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTAGAACATGGGCTGCTTaGGGGACTTGGGGCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: FKEEFYISTCLWVSVCQARTWAA*GTWGNQ Trigger: CTGGTTGCCCCAAGTCCCCAAAGCAGCCCATGTTCT...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTTTTCTAGGCAGACCCTaGGGGAACTCAGGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FKEEFYISTCLWVSVCQAFLGRP*GNSGWK Trigger: CTTCCAGCCTGAGTTCCCCAAGGGTCTGCCTAGAAA...AGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGGAGTTTTATATAAGCACATGCCTTTGGGTGTCTGTTTGCCAGGCTGGGAATATGTTGAGGTTGTaGAGCTTGGAAGTGGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: KEEFYISTCLWVSVCQAGNMLRL*SLEVGP Trigger: GGGACCCACTTCCAAGCTCAACAACCTCAACATATT...CCCAGCCTGGCAAACAGACACCCAAAGGCATGTGCTTATATAAAACTCCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS GCA 90 bp | TTCAAAGACACTGCACTGAGCTCAGACTGTGAGGACTTCTTGGGCTaGTCACTTAACTCAGTCTGTGGAAATTTCTTCAGGACTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: FKDTALSSDCEDFLG*SLNSVCGNFFRTLF Trigger: AAACAAAGTCCTGAAGAAATTTCCACAGACTGAGTTAAGTGAGCAGCCCAAGAAGTCCTCACAGTCTGAGCTCAGTGCAGTGTCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS CCA 72 bp | AGGCTTTGGGGTTTTTCTGAACAGTTCTCCAAGTTCTaGCTGAGAGGTTTGGAACTTAGCTTGGAGGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: RLWGFSEQFSKF*LRGLELSLEVS Trigger: CGAAACCTCCAAGCTAAGTTCCAAACCTCTCAGCCAGAACTTGGAGAACTGTTCAGAAAAACCCCAAAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
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| CDS TCA 72 bp | TCAGGACTTTGTTTAACTCAGGCTTTGGGGTTTTTCTaGACAGTTCTCCAAGTTCTGGCTGAGAGGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SGLCLTQALGFF*TVLQVLAERFG Trigger: TCCAAACCTCTCAGCCAGAACTTGGAGAACTGTTCAGAAAAACCCCAAAGCCTGAGTTAAACAAAGTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052079.8 |
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| CDS CAA 72 bp | TTTTCTGAACAGTTCTCCAAGTTCTGGCTGAGAGGTTaGGAACTTAGCTTGGAGGTTTCGGAAGTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: FSEQFSKFWLRG*ELSLEVSEVLI Trigger: AATCAGGACTTCCGAAACCTCCAAGCTAAGTTCCAAACCTCTCAGCCAGAACTTGGAGAACTGTTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052079.8 ENSMUST00000116619.9 |
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