RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRAG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050271

Ensembl transcript IDs: ENSMUST00000110492.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp GGAGGAATGTGGACTCTGAGAGGAGGCTGGCGTGTGTaGAATGACATCCCCAGTCTTTCATATTATATATGT +
Preference number: 3 (lower is better)
Translates to: GGMWTLRGGWRV*NDIPSLSYYIC
Trigger: ACATATATAATATGAAAGACTGGGGATGTCATTTCACACACGCCAGCCTCCTCTCAGAGTCCACATTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
3UTR TCA 72 bp AATGTGGACTCTGAGAGGAGGCTGGCGTGTGTGAAATaGCATCCCCAGTCTTTCATATTATATATGTATATA +
Preference number: 3 (lower is better)
Translates to: NVDSERRLACVK*HPQSFILYMYI
Trigger: TATATACATATATAATATGAAAGACTGGGGATGTCATTTCACACACGCCAGCCTCCTCTCAGAGTCCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGAGCGAAGGGGCTGCTaGCCCCGCTGCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWERRGC*PRCGCC
Trigger: GCAGCAGCCGCAGCGGGGCCAGCAGCCCCTTCGCTC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGCAGGCAGTGGTGGCTaGGGGCGCGGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWAGSGG*GRGRRA
Trigger: TGCCCTTCTGCCGCGCCCGCAGCCACCACTGCCTGC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTGGGCAGGGGGCTGTaGGGATACGGCAGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLGRGL*GYGRRG
Trigger: ACCGCGCCTGCCGTATCCCCACAGCCCCCTGCCCAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGGGCCTGGGGCCCTTaGGGCAGCTGGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRAWGP*GSWMSS
Trigger: GGATGACATCCAGCTGCCCCAAGGGCCCCAGGCCCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGCGCCTTCCCTGTCCTaGCTCCAGCTAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWAPSLS*LQLGGV
Trigger: GACACCCCCTAGCTGGAGCCAGGACAGGGAAGGCGC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGTGGCCGCTCTGCACTaGAGACTGGGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWVAALH*RLGLPQ
Trigger: CTGTGGGAGCCCCAGTCTCCAGTGCAGAGCGGCCAC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTGCTGGAGGAGGCCTaGCTGGACACGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLLEEA*LDTLSW
Trigger: CCAGCTCAGCGTGTCCAGCCAGGCCTCCTCCAGCAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGGTGGGGGAGGGGGTaGGAATGCCTCCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRWGRG*ECLQSA
Trigger: GGCAGATTGGAGGCATTCTCACCCCCTCCCCCACCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGATGGACCTCCATCGCTaGAGGGCCTGGAGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWMDLHR*RAWSPR
Trigger: CCTCGGACTCCAGGCCCTGCAGCGATGGAGGTCCAT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGATGAGCCTGGGCAGCTaGTTCTCACCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWMSLGS*FSPGPP
Trigger: GGGAGGGCCTGGTGAGAAGCAGCTGCCCAGGCTCAT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGTGGTGAAGCTGACGTaGGCCCCTCTGAAGGACGGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWVVKLT*APLKDG
Trigger: CCCGTCCTTCAGAGGGGCCCACGTCAGCTTCACCAC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGACACAGTCCTGCTCCTaGGCAGGGGGCTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWTQSCS*AGGCGD
Trigger: ATCCCCACAGCCCCCTGCCCAGGAGCAGGACTGTGT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGGAGCCAGCCGGGCCTaGCTCTTCTTCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWGASRA*LFFCCR
Trigger: CCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAAAGCTCTCGTGAGCTaGGGGCAGCTCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWKALVS*GQLFPP
Trigger: GGGAGGGAAGAGCTGCCCTCAGCTCACGAGAGCTTT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTTCGCTGTGGATCCCTaGCCACAGCACTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWFAVDP*PQHSLG
Trigger: CCCCAGAGAGTGCTGTGGTCAGGGATCCACAGCGAA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGATGGTGGTTGCCACCTaGGGAGCAGGGTTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWMVVAT*GAGFAP
Trigger: AGGCGCAAACCCTGCTCCTCAGGTGGCAACCACCAT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGGGCTTGCAGGCTTCTaGAGTCCTCGGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWGLAGF*SPRKLP
Trigger: AGGCAGCTTCCGAGGACTGCAGAAGCCTGCAAGCCC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGGCAATTCTCAGGCCTaGCAGGCAGGCGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWGNSQA*QAGEFQ
Trigger: CTGGAACTCGCCTGCCTGCCAGGCCTGAGAATTGCC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGGCCCTTGGGGCAGCTaGATGTCATCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWGPWGS*MSSLQR
Trigger: CCTTTGCAGGGATGACATCCAGCTGCCCCAAGGGCC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCAGAGGTGCCATCGATaGGATGGAGACGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWQRCHR*DGDGAR
Trigger: CCTGGCACCGTCTCCATCCCATCGATGGCACCTCTG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGGTCCTCTTCCGGGTaGGCAGCGATGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWWSSSG*AAMTVM
Trigger: CATCACTGTCATCGCTGCTCACCCGGAAGAGGACCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTCTCTCCCCCAACTTTaGCTCAACTCCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSLPQL*LNSCPT
Trigger: GGTGGGGCAGGAGTTGAGTCAAAGTTGGGGGAGAGA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGCCCTCCTTGCTGCTaGTGCTACTCAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWCPPCC*CYSAGC
Trigger: ACAGCCTGCTGAGTAGCATCAGCAGCAAGGAGGGCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTCGGGAGCAGGAGCTTaGCTGGGGTTCGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSGAGA*LGFVSN
Trigger: ATTGGAGACGAACCCCAGGCAAGCTCCTGCTCCCGA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTCAGAGTTAAGGGATaGCTTCTTGGGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLRVKG*LLGAQA
Trigger: CGCCTGGGCCCCAAGAAGCCATCCCTTAACTCTGAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTGGACACGCTGAGCTaGGATGATGACGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLDTLS*DDDVEV
Trigger: CACCTCCACGTCATCATCCCAGCTCAGCGTGTCCAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGTAGAGGGACAGTGTaGGCAGCGGGGGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSRGTV*AAGVSP
Trigger: AGGACTTACCCCCGCTGCCCACACTGTCCCTCTACT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCCGGGTTTCCAGATGTaGTCCACAAAGTCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWPGFQM*STKSLH
Trigger: GTGCAGCGACTTTGTGGAGCACATCTGGAAACCCGG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGACAGTGATGGTGGTTaGCACCTGAGGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWDSDGG*HLRSRV
Trigger: AACCCTGCTCCTCAGGTGGCAACCACCATCACTGTC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCCGGCACAGATGGGCTaGAGTATGAGGCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWPAQMG*SMRLIW
Trigger: CCAAATCAGCCTCATACTGCAGCCCATCTGTGCCGG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGACACAGGTCCCGGTaGATGATCCCGTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRHRSR*MIPCSF
Trigger: GAAGGAACACGGGATCATCCACCGGGACCTGTGTCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCGGGCTGAGGCTTTCTaGAGAACTCTGGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRAEAF*RTLAHF
Trigger: AAAGTGAGCCAGAGTTCTGCAGAAAGCCTCAGCCCG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGTGCCTCCTGGCTTTTaGTTGGCCTTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWVPPGF*LAFRKL
Trigger: CAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCAC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTCACTATCTTTTTCTaGGGCAGAGGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLTIFF*GRGGGC
Trigger: GCAGCCTCCTCCTCTGCCCCAGAAAAAGATAGTGAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTCAAACTTGCGGTACTaGGAGGCAGACACGATCTCG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSNLRY*EADTIS
Trigger: CGAGATCGTGTCTGCCTCCCAGTACCGCAAGTTTGA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGGAAGCTCACTGGTTaGAAGGCAGTGTTCCTATCC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWWKLTG*KAVFLS
Trigger: GGATAGGAACACTGCCTTTCAACCAGTGAGCTTCCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGCAGAAGCAGTTCTTaGAAGACCCGGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSRSSS*KTRVSR
Trigger: TCTGGAAACCCGGGTCTTGCAAGAACTGCTTCTGCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTCTCCAATTGACCTTTaGGACTTCAGCGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSPIDL*DFSAQA
Trigger: AGCCTGAGCGCTGAAGTCCCAAAGGTCAATTGGAGA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGCTTTTGGACAGTTTaGGGGGAATGGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWCFWTV*GEWQAS
Trigger: AGAAGCCTGCCATTCCCCCCAAACTGTCCAAAAGCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGAGGAGAAGACATGGTaGGAACGGTTTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWEEKTW*ERFPEF
Trigger: GAACTCTGGAAACCGTTCCCACCATGTCTTCTCCTC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTTTTCTGGCCACCCATaGAGAGATCTTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWFSGHP*RDLHTW
Trigger: CCAAGTGTGAAGATCTCTTCATGGGTGGCCAGAAAA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTTAGTTTTGCTGTTCTaGCCAGAGGTGCCATCGATG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLVLLF*PEVPSM
Trigger: CATCGATGGCACCTCTGGGCAGAACAGCAAAACTAA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGAATGCCTCCAATCTaGCTCTGTCCTTTGGGAACT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRMPPI*LCPLGT
Trigger: AGTTCCCAAAGGACAGAGGCAGATTGGAGGCATTCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCAGAAGTCATCATGGTaGGCTTTACAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWQKSSW*ALQQWW
Trigger: CCACCATTGCTGTAAAGCCCACCATGATGACTTCTG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCGCAGTTCCTTTTTCTaGCCACCCATGAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRSSFF*PPMKRS
Trigger: AGATCTCTTCATGGGTGGCCAGAAAAAGGAACTGCG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGGTCCTCAGAGCAGGTaGCACAGTAGTAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWGPQSR*HSSKLH
Trigger: ATGCAATTTACTACTGTGCCACCTGCTCTGAGGACC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCTGGCAGGCAGTGGTaGCTGCGGGCGCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPGRQW*LRARQK
Trigger: CTTCTGCCGCGCCCGCAGCCACCACTGCCTGCCAGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGTTGCACGTCAGCTTaGAGAGTGACCAGTAATTCT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWCCTSA*RVTSNS
Trigger: AGAATTACTGGTCACTCTTCAAGCTGACGTGCAACA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGCCCACGTGGCCACTaGACCCCCACGGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGPRGH*TPTAES
Trigger: TGACTCTGCCGTGGGGGTGCAGTGGCCACGTGGGCC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTTCATCATCATCAGTaGTCGCTTCATGTCGATCCA +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLHHHQ*SLHVDP
Trigger: TGGATCGACATGAAGCGAGCACTGATGATGATGAAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGAGAAGTGCAGGGCCTaGGGCCCTTGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGEKCRA*GPWGSW
Trigger: CCAGCTGCCCCAAGGGCCCCAGGCCCTGCACTTCTC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGCAGCTGAAGCTGGGTaGTGCTGGAGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGAAEAG*CWRRPG
Trigger: GCCAGGCCTCCTCCAGCAGCACCCAGCTTCAGCTGC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCATGGGCACAAACATTaGTTTCTGAATGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWHGHKH*FLNGLG
Trigger: ACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCAGCAGGCTGTGCAGCTaGAGCTGGGTGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGSRLCS*SWVLLE
Trigger: CTCCAGCAGCACCCAGCTTCAGCTGCACAGCCTGCT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGGGGCTGTGGAGAAGTaGAGGGCCTGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQGAVEK*RAWGPW
Trigger: CCAAGGGCCCCAGGCCCTGCACTTCTCCACAGCCCC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCAGGGGAGGCAAGCATaGTGGAGGGCACAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGQGRQA*WRAQRP
Trigger: TGGCCTCTGTGCCCTCCAGCATGCTTGCCTCCCCTG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCACCACCACACAGTCCTaGTCCTGGGCAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGTTTQS*SWAGGC
Trigger: ACAGCCCCCTGCCCAGGAGCAGGACTGTGTGGTGGT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGTTCGAAGGCCCACGTaGCCACTGCACCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQVRRPT*PLHPHG
Trigger: GCCGTGGGGGTGCAGTGGCCACGTGGGCCTTCGAAC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGAAGCTGGGTGCTGCTaGAGGAGGCCTGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGEAGCC*RRPGWT
Trigger: TGTCCAGCCAGGCCTCCTCCAGCAGCACCCAGCTTC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTCGCGCTCCCGGAGCTaGGCTCGCACCTCGAATGGG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSRSRS*ARTSNG
Trigger: CCCATTCGAGGTGCGAGCCCAGCTCCGGGAGCGCGA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGCGAAAGCTCTCGTaGGCTGAGGGCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGWRKLS*AEGSSS
Trigger: GGAAGAGCTGCCCTCAGCTCACGAGAGCTTTCGCCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCTCTGGTCCAAGACTaGAGAGGAGGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPLVQD*RGGGWW
Trigger: CCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGTGGTCCCTGCTCCCTaGACGTGGGTGAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQVVPAP*TWVSSP
Trigger: GGGACTGCTCACCCACGTGCAGGGAGCAGGGACCAC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGTGCTCCAGCCCGTTaGAGAGCTGCAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGAPAR*RAAEAG
Trigger: TCCTGCTTCTGCAGCTCTGCAACGGGCTGGAGCACC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCGTGTTCCTTCAGGTaGTCCAGCCCGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPCSFR*SSPLQS
Trigger: GCTCTGCAACGGGCTGGAGCACCTGAAGGAACACGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCAGAGGAGGTGGCTGGTaGGGGACACTTGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGRGGGW*GTLGRV
Trigger: GACTCTGCCAAGTGTCCCCCACCAGCCACCTCCTCT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGCCGAGGCCAAGTACTaGCAGCAAAGCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGAEAKY*QQSQSS
Trigger: GGAGGACTGGCTTTGCTGCCAGTACTTGGCCTCGGC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGTCTTGCTGCTTCCCTaGGGCCGGTTCCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGVLLLP*GRFLHK
Trigger: CTTGTGAAGGAACCGGCCTCAGGGAAGCAGCAAGAC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCACAGGTCCCGGTGGATaGTCCCGTGTTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGTGPGG*SRVPSG
Trigger: ACCTGAAGGAACACGGGATCATCCACCGGGACCTGT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTGGCCGCTGAGGTCTTaGTGCTTCCCTGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQWPLRS*CFPEAG
Trigger: ACCGGCCTCAGGGAAGCAGCAAGACCTCAGCGGCCA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGGGGCGGGTTCGCTGTaGATCCCTGACCACAGCACT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQGAGSL*IPDHST
Trigger: AGTGCTGTGGTCAGGGATCCACAGCGAACCCGCCCC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCAGAGGTGAGAAAGTaGCCGCTGAGGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPEVRK*PLRSCC
Trigger: GCAGCAAGACCTCAGCGGCCACTTTCTCACCTCTGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGCTTAGGTTCAGCTTaGGACTTGCCGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGLGSA*DLPSVA
Trigger: AGCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAAGTCGGAGGCAGTCTaGTGCGGTACCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQKSEAV*CGTSRV
Trigger: CACCCGGGAGGTACCGCACCAGACTGCCTCCGACTT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGCACCTCGAATGGGTTaGGCTGGTGGAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGAPRMG*AGGAAH
Trigger: ATGAGCTGCTCCACCAGCCCAACCCATTCGAGGTGC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGGCTCGCACCTCGAATaGGTTGGGCTGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQGSHLE*VGLVEQ
Trigger: CTGCTCCACCAGCCCAACCCATTCGAGGTGCGAGCC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGTGGGTGGGTTCATATaGTGGACCTCCATCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGVGGFI*WTSIAA
Trigger: TGCAGCGATGGAGGTCCATCATATGAACCCACCCAC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGAGAGTTGCCATCTGTaGAGGCAAGAGGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGESCHL*RQEGLQ
Trigger: CTGCAAGCCCTCTTGCCTGCACAGATGGCAACTCTC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGGGACAACGAGAGTTaGCATCTGTGCAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGDNES*HLCRQE
Trigger: CTCTTGCCTGCACAGATGGCAACTCTCGTTGTCCCC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGCCAGAGCCCTCGGTaGTATGCACAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGCQSPR*YAQHLW
Trigger: CCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCTGAGGAGCAGGGTTTaGGCCTTCCCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQLRSRV*AFPVLA
Trigger: AGCCAGGACAGGGAAGGCGCAAACCCTGCTCCTCAG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGAGCAGGAGCTTGCCTaGGGTTCGTCTCCAATTGAC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGEQELA*GSSPID
Trigger: GTCAATTGGAGACGAACCCCAGGCAAGCTCCTGCTC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCTGCCTTCTTCCTCTTaGCGCTTTCGGCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGLPSSS*RFRRRW
Trigger: CCATCTACGCCGAAAGCGCCAAGAGGAAGAAGGCAG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGACTTGGCCCTGGCTATaGCCAGCTGGGACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQTWPWL*PAGTCS
Trigger: AGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGTCCATACTTGGCCCTaGCTATGGCCAGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQVHTWP*LWPAGT
Trigger: GGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGAC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCATCGCTGCAGGGCCTaGAGTCCGAGGCTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQHRCRA*SPRLGY
Trigger: ATAGCCTAGCCTCGGACTCCAGGCCCTGCAGCGATG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGGATGATGACGTaGAGGTGGCCGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQAGMMT*RWPLCT
Trigger: AGTGCAGAGCGGCCACCTCCACGTCATCATCCCAGC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGCTCTTCTTCTGTTaGAGGTTGGTGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGWLFFC*RLVVPP
Trigger: AGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCTGGCTATGGCCAGCTaGGACCTGCTCTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQLAMAS*DLLFLG
Trigger: CCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAGACTGAAGAGGAGGTaGCTGGTGGGGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQRLKRR*LVGDTW
Trigger: CCAAGTGTCCCCCACCAGCCACCTCCTCTTCAGTCT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGTGCCATCGATGGGATaGAGACGGTGCCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQVPSMG*RRCQVE
Trigger: CTCTACCTGGCACCGTCTCCATCCCATCGATGGCAC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGCTTAGGGGAACCTTaGGTCCAGAAGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGLGEP*VQKKPS
Trigger: TGATGGCTTCTTCTGGACCCAAGGTTCCCCTAAGCC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAGCATAGATGCTGCCTaGGTCCTCAGAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSIDAA*VLRAGG
Trigger: GCCACCTGCTCTGAGGACCCAGGCAGCATCTATGCT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTCTGTTGCAGGTTGGTaGTGCCTCCTGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGSVAGW*CLLAFA
Trigger: AGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGATGTCATCCCTaGAAAGGCAGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQAGCHP*KGSQLL
Trigger: CAGAAGCTGGCTGCCTTTGCAGGGATGACATCCAGC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGAGCCCTCGGTGCTATaGACAGCATCTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGEPSVL*TASLDS
Trigger: AGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTGTTCTGCCCAGAGGTaGCATCGATGGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQCSAQR*HRWDGD
Trigger: GTCTCCATCCCATCGATGGCACCTCTGGGCAGAACA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGCTTTACAGCAATGGTaGGCTTTGAGTAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGALQQW*ALSRPS
Trigger: GCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGAGGGTGAGCACCTTTaGTCACTGTCATCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQEGEHL*SLSSSE
Trigger: CTCGGAGGATGACAGTGACCAAAGGTGCTCACCCTC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCTGATGGTGGGTGAGTaGGTGGGTTCATATGATGGA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGLMVGE*VGSYDG
Trigger: TCCATCATATGAACCCACCCACTCACCCACCATCAG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTGGCCGCAGTCTTGCTaGATGTTGAAATGCACCGGC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQWPQSC*MLKCTG
Trigger: GCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGACAGAGGCCACAAAGTaGCCGCAGTCTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQTEATK*PQSCWM
Trigger: CATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGTTGGTGGTGCCTCCTaGCTTTTGCTTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQVGGAS*LLLGLQ
Trigger: CTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAAC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGGGATGGCCAGCTGTTaGCTGATGATCACTTCGCAA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQGMASC*LMITSQ
Trigger: TTGCGAAGTGATCATCAGCCAACAGCTGGCCATCCC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTATGCAGTCCGACCATaGTATAGGCTGGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQYAVRP*YRLGDN
Trigger: GTTGTCCCCCAGCCTATACCATGGTCGGACTGCATA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTTCCTGGAAGCTCACTaGTTGAAAGGCAGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGFLEAH*LKGSVP
Trigger: AGGAACACTGCCTTTCAACCAGTGAGCTTCCAGGAA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTCTGCCTCTGTCCTTTaGGAACTCAAACGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGSASVL*ELKRKG
Trigger: TCCTTTGCGTTTGAGTTCCCAAAGGACAGAGGCAGA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTGGTGGGTGAGTGGGTaGGTTCATATGATGGACCTC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQWWVSG*VHMMDL
Trigger: GAGGTCCATCATATGAACCCACCCACTCACCCACCA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAGTCTTGCTGGATGTTaGAATGCACCGGCACAGATG +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSLAGC*NAPAQM
Trigger: CATCTGTGCCGGTGCATTTCAACATCCAGCAAGACT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGGCACAGTAGTAAATTaGATCCCCCGAGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQGTVVN*IPRVTA
Trigger: TGCTGTGACTCGGGGGATGCAATTTACTACTGTGCC...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAAGTGGCCGCAGTCTTaGTGGATGTTGAAATGCACC +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQKWPQS*WMLKCT
Trigger: GGTGCATTTCAACATCCAGCAAGACTGCGGCCACTT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR GCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCATGTCGATCCAGTTGTaGAGAGTGTTACACAGTACC +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGMSIQL*RVLHST
Trigger: GGTACTGTGTAACACTCTGCACAACTGGATCGACAT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTTTTTCCTCTTCTGTTaGTCTTGTACGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGFFLFC*SCTWSL
Trigger: CAGGGACCACGTACAAGACCAACAGAAGAGGAAAAA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTATGCACAGCATCTTTaGATTCTGGACAACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HPRTTVICTISQGNPDAGYAQHL*ILDNSP
Trigger: TGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTGGCAGGCTTCTCTTTaGCCGTGTTTTCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQWQASL*PCFQSH
Trigger: ATGTGACTGAAAACACGGCCAAAGAGAAGCCTGCCA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAGTATGAGGCTGATTTaGGTTCTGGGGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSMRLI*VLGFCR
Trigger: TCTGCAAAACCCCAGAACCCAAATCAGCCTCATACT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR TCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCGTCAGCTTGAAGAGTaGCCAGTAATTCTCATTGAA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQRQLEE*PVILIE
Trigger: TTCAATGAGAATTACTGGTCACTCTTCAAGCTGACG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAGCATCTTTGGATTCTaGACAACAGTCCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSIFGF*TTVQNG
Trigger: TCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCTTTCTGCAGAACTCTaGCTCACTTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQLSAEL*LTFSKS
Trigger: TGACTTGGAAAAAGTGAGCCAGAGTTCTGCAGAAAG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CCA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGACATTGGTTTCTGAATaGCTTAGGTTCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQTLVSE*LRFSLG
Trigger: TCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GGGCAGCTGCTTCTCACCAGGCCCTCCCTGGCAGGCAGTGGTGGCTaGGGGCGCGGCAGAAGGGCACCTGGATGTGGTGGTGGGCACGGT +
Preference number: 5 (lower is better)
Translates to: GQLLLTRPSLAGSGG*GRGRRAPGCGGGHG
Trigger: ACCGTGCCCACCACCACATCCAGGTGCCCTTCTGCCGCGCCCGCAGCCACCACTGCCTGCCAGGGAGGGCCTGGTGAGAAGCAGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GTAGATGGGCGAGTTGCTGCAGGCCGGGAGAGTAGAGGGACAGTGTaGGCAGCGGGGGTAAGTCCTCCCGCCGGTAGTCGCGCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: VDGRVAAGRESRGTV*AAGVSPPAGSRAPG
Trigger: TCCGGGAGCGCGACTACCGGCGGGAGGACTTACCCCCGCTGCCCACACTGTCCCTCTACTCTCCCGGCCTGCAGCAACTCGCCCATCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp CACGGCTGCTCCACCAGCTCCCGCCGTGGCCCCCACAGCAAGCACTaGAGCACCCGCTTAGCTTCACCTATGCGGATGCGCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: HGCSTSSRRGPHSKH*STRLASPMRMRLMG
Trigger: TCCCATCAAGCGCATCCGCATAGGTGAAGCTAAGCGGGTGCTGCAGTGCTTGCTGTGGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CCGGGTGATGACCACCACACAGTCCTGCTCCTGGGCAGGGGGCTGTaGGGATACGGCAGGCGCGGTGTCTTTGCTGGATGTGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PGDDHHTVLLLGRGL*GYGRRGVFAGCVRG
Trigger: TCCCCTGACACATCCAGCAAAGACACCGCGCCTGCCGTATCCCCACAGCCCCCTGCCCAGGAGCAGGACTGTGTGGTGGTCATCACCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGACAGGTGCCTTGACTTaGGAGGTGGGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWTGALT*EVGEGV
Trigger: CACCCCCTCCCCCACCTCCAAAGTCAAGGCACCTGT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAGGTGCTCCAGCCCGTaGCAGAGCTGCAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWRCSSP*QSCRSR
Trigger: CCTGCTTCTGCAGCTCTGCAACGGGCTGGAGCACCT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp TGGGACCTGCTCTTTCTTGGGCTCGGGCCTCGGAGGCCCCGGAGCTaGCTTCTTCCTCTTGGCGCTTTCGGCGTAGATGGGTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WDLLFLGLGPRRPRS*LLPLGAFGVDGFRL
Trigger: CAGCCTGAACCCATCTACGCCGAAAGCGCCAAGAGGAAGAAGGCAGCTCCGGGGCCTCCGAGGCCCGAGCCCAAGAAAGAGCAGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GTATCACCTGTCCATACTTGGCCCTGGCTATGGCCAGCTGGGACCTaGTCTTTCTTGGGCTCGGGCCTCGGAGGCCCCGGAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VSPVHTWPWLWPAGT*SFLGSGLGGPGAAF
Trigger: GAAGGCAGCTCCGGGGCCTCCGAGGCCCGAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGACAGGTGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp ACAGGACAGACCATCGGAAGAGCTGGCGGCCTCAGAGTTAAGGGATaGCTTCTTGGGGCCCAGGCGGGGCGGGTTCGCTGTGGATCCCTG +
Preference number: 5 (lower is better)
Translates to: TGQTIGRAGGLRVKG*LLGAQAGRVRCGSL
Trigger: CAGGGATCCACAGCGAACCCGCCCCGCCTGGGCCCCAAGAAGCCATCCCTTAACTCTGAGGCCGCCAGCTCTTCCGATGGTCTGTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp TTCAGGGACTGCAAGAGGGCCCCTGGCTCTGCCGAGGCCAAGTACTaGCAGCAAAGCCAGTCCTCCAGTTCCACACCCCGCCTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: FRDCKRAPGSAEAKY*QQSQSSSSTPRLRS
Trigger: GGACCGAAGGCGGGGTGTGGAACTGGAGGACTGGCTTTGCTGCCAGTACTTGGCCTCGGCAGAGCCAGGGGCCCTCTTGCAGTCCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp CGGCAGGCGCGGTGTCTTTGCTGGATGTGTCAGGGGAGGCAAGCATaGTGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RQARCLCWMCQGRQA*WRAQRPQSGRSLAG
Trigger: TCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGCCTCCCCTGACACATCCAGCAAAGACACCGCGCCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp CAGTTGTGCAGAGTGTTACACAGTACCTCCTCTGACGTGCACGGCTaGTCCACCAGCTCCCGCCGTGGCCCCCACAGCAAGCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: QLCRVLHSTSSDVHG*STSSRRGPHSKHCS
Trigger: GCTGCAGTGCTTGCTGTGGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp AATCCAGGTATCACCTGTCCATACTTGGCCCTGGCTATGGCCAGCTaGGACCTGCTCTTTCTTGGGCTCGGGCCTCGGAGGCCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: NPGITCPYLALAMAS*DLLFLGLGPRRPRS
Trigger: GCTCCGGGGCCTCCGAGGCCCGAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGACAGGTGATACCTGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp AGCCCCTGCGCAACCAAAGGCTCCTCTTCACCGGCTTGTAAGTCCTaGTTCGAAGGCCCACGTGGCCACTGCACCCCCACGGCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SPCATKGSSSPACKS*FEGPRGHCTPTAES
Trigger: TGACTCTGCCGTGGGGGTGCAGTGGCCACGTGGGCCTTCGAACCAGGACTTACAAGCCGGTGAAGAGGAGCCTTTGGTTGCGCAGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CGGCACTGGCGGCTCCAAGCACCAGTCTGGTATCTTGGCCGCCTCTaGTCCAAGACTGAAGAGGAGGTGGCTGGTGGGGGACACTTGGCA +
Preference number: 5 (lower is better)
Translates to: RHWRLQAPVWYLGRL*SKTEEEVAGGGHLA
Trigger: TGCCAAGTGTCCCCCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GTGGTCCCTGCTCCCTGCACGTGGGTGAGCAGTCCCCTCCACGTCTaGCAGAGCCCTCGGTGCTATGCACAGCATCTTTGGATTCTGGAC +
Preference number: 5 (lower is better)
Translates to: VVPAPCTWVSSPLHV*QSPRCYAQHLWILD
Trigger: GTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCAGGGAGCAGGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp TGTCGATCCAGTTGTGCAGAGTGTTACACAGTACCTCCTCTGACGTaGACGGCTGCTCCACCAGCTCCCGCCGTGGCCCCCACAGCAAGC +
Preference number: 5 (lower is better)
Translates to: CRSSCAECYTVPPLT*TAAPPAPAVAPTAS
Trigger: GCTTGCTGTGGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTGGATCGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GAGTCCGAGGCTAGGCTATCTGTGGAGCCCGTGGTGAAGCTGACGTaGGCCCCTCTGAAGGACGGGCTGAGGCTTTCTGCAGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: ESEARLSVEPVVKLT*APLKDGLRLSAELW
Trigger: CCAGAGTTCTGCAGAAAGCCTCAGCCCGTCCTTCAGAGGGGCCCACGTCAGCTTCACCACGGGCTCCACAGATAGCCTAGCCTCGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp TTGCGGTACTGGGAGGCAGACACGATCTCGGGAGCCAGCCGGGCCTaGCTCTTCTTCTGTTGCAGGTTGGTGGTGCCTCCTGGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: LRYWEADTISGASRA*LFFCCRLVVPPGFC
Trigger: GCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCCCGAGATCGTGTCTGCCTCCCAGTACCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp GTGTGTAGAGGCCCCCAAGCTTGGCATAGGTGCCCTCCTTGCTGCTaGTGCTACTCAGCAGGCTGTGCAGCTGAAGCTGGGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VCRGPQAWHRCPPCC*CYSAGCAAEAGCCW
Trigger: CCAGCAGCACCCAGCTTCAGCTGCACAGCCTGCTGAGTAGCATCAGCAGCAAGGAGGGCACCTATGCCAAGCTTGGGGGCCTCTACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp TACAGTGCGCCAGCAGCAGGTTCTCCAGACACAGGTCCCGGTGGATaGTCCCGTGTTCCTTCAGGTGCTCCAGCCCGTTGCAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: YSAPAAGSPDTGPGG*SRVPSGAPARCRAA
Trigger: TGCAGCTCTGCAACGGGCTGGAGCACCTGAAGGAACACGGGATCATCCACCGGGACCTGTGTCTGGAGAACCTGCTGCTGGCGCACTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp CTTCATGTCGATCCAGTTGTGCAGAGTGTTACACAGTACCTCCTCTaGCGTGCACGGCTGCTCCACCAGCTCCCGCCGTGGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: LHVDPVVQSVTQYLL*RARLLHQLPPWPPQ
Trigger: CTGTGGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTGGATCGACATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GCAGACACGATCTCGGGAGCCAGCCGGGCCTGGCTCTTCTTCTGTTaGAGGTTGGTGGTGCCTCCTGGCTTTTGCTTGGCCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ADTISGASRAWLFFC*RLVVPPGFCLAFRK
Trigger: CTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCCCGAGATCGTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GAACAGTACTCCCCACCTTCGCTGTCTCCTGAGGGTGAGCACCTTTaGTCACTGTCATCCTCCGAGGGCAGGGATTCCCGCAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: EQYSPPSLSPEGEHL*SLSSSEGRDSRRGC
Trigger: ACAGCCCCTGCGGGAATCCCTGCCCTCGGAGGATGACAGTGACCAAAGGTGCTCACCCTCAGGAGACAGCGAAGGTGGGGAGTACTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GCCTCTGGTCCAAGACTGAAGAGGAGGTGGCTGGTGGGGGACACTTaGCAGAGTCACCAGCAGTGGCAACGCCATTGGTGTGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ASGPRLKRRWLVGDT*QSHQQWQRHWCGRK
Trigger: CTTCCTGCCACACCAATGGCGTTGCCACTGCTGGTGACTCTGCCAAGTGTCCCCCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CAGTCTGGTATCTTGGCCGCCTCTGGTCCAAGACTGAAGAGGAGGTaGCTGGTGGGGGACACTTGGCAGAGTCACCAGCAGTGGCAACGC +
Preference number: 5 (lower is better)
Translates to: QSGILAASGPRLKRR*LVGDTWQSHQQWQR
Trigger: GCGTTGCCACTGCTGGTGACTCTGCCAAGTGTCCCCCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CAGGCGCGGTGTCTTTGCTGGATGTGTCAGGGGAGGCAAGCATGCTaGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGT +
Preference number: 5 (lower is better)
Translates to: QARCLCWMCQGRQAC*RAQRPQSGRSLAGC
Trigger: ACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGCCTCCCCTGACACATCCAGCAAAGACACCGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGGCACAGTAGTAAATaGCATCCCCCGAGTCACAGC +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWWHSSK*HPPSHS
Trigger: GCTGTGACTCGGGGGATGCAATTTACTACTGTGCCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTTCTTCTGTTGCAGGTaGGTGGTGCCTCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWFFCCR*VVPPGF
Trigger: AAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGGAACTCATCAAACTaGCGGTACTGGGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWWNSSN*RYWEAD
Trigger: GTCTGCCTCCCAGTACCGCAAGTTTGATGAGTTCCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GTCCGACCATGGTATAGGCTGGGGGACAACGAGAGTTGCCATCTGTaGAGGCAAGAGGGCTTGCAGGCTTCTGCAGTCCTCGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRPWYRLGDNESCHL*RQEGLQASAVLGSC
Trigger: GCAGCTTCCGAGGACTGCAGAAGCCTGCAAGCCCTCTTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCATGGTCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp ATCCACGCGGGCCTCCAGGTTATGCAGTCCGACCATGGTATAGGCTaGGGGACAACGAGAGTTGCCATCTGTGCAGGCAAGAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: IHAGLQVMQSDHGIG*GTTRVAICAGKRAC
Trigger: GCAAGCCCTCTTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCATGGTCGGACTGCATAACCTGGAGGCCCGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp TTTCCTCTTCTGTTGGTCTTGTACGTGGTCCCTGCTCCCTGCACGTaGGTGAGCAGTCCCCTCCACGTCTGCCAGAGCCCTCGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: FPLLLVLYVVPAPCT*VSSPLHVCQSPRCY
Trigger: ATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCAGGGAGCAGGGACCACGTACAAGACCAACAGAAGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp TCCTCCTCCTCTTCTATCCGGCACTGGCGGCTCCAAGCACCAGTCTaGTATCTTGGCCGCCTCTGGTCCAAGACTGAAGAGGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SSSSSIRHWRLQAPV*YLGRLWSKTEEEVA
Trigger: AGCCACCTCCTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCGGATAGAAGAGGAGGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CTTAGGTTCAGCTTGGGACTTGCCGTCCGTGGCTTAGGGGAACCTTaGGTCCAGAAGAAGCCATCAGGGGAAGAGGCGGCACGGCTCACT +
Preference number: 5 (lower is better)
Translates to: LRFSLGLAVRGLGEP*VQKKPSGEEAARLT
Trigger: AGTGAGCCGTGCCGCCTCTTCCCCTGATGGCTTCTTCTGGACCCAAGGTTCCCCTAAGCCACGGACGGCAAGTCCCAAGCTGAACCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GTGTCAGGGGAGGCAAGCATGCTGGAGGGCACAGAGGCCACAAAGTaGCCGCAGTCTTGCTGGATGTTGAAATGCACCGGCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: VSGEASMLEGTEATK*PQSCWMLKCTGTDG
Trigger: CCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGCCTCCCCTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTTTTTAACAGGTGCCTaGACTTTGGAGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWFLTGA*TLEVGE
Trigger: CTCCCCCACCTCCAAAGTCAAGGCACCTGTTAAAAA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGGAGTCACAGCAAGGTTaGTTGCACGTCAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWESQQG*LHVSLK
Trigger: CTTCAAGCTGACGTGCAACAAACCTTGCTGTGACTC...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp GGGTTTGCGCCTTCCCTGTCCTGGCTCCAGCTAGGGGGTGTCTTCTaGATCCAGGTATCACCTGTCCATACTTGGCCCTGGCTATGGCCA +
Preference number: 5 (lower is better)
Translates to: GFAPSLSWLQLGGVF*IQVSPVHTWPWLWP
Trigger: TGGCCATAGCCAGGGCCAAGTATGGACAGGTGATACCTGGATTCAGAAGACACCCCCTAGCTGGAGCCAGGACAGGGAAGGCGCAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp CTCAGACCCTGTTTTTCCTCTTCTGTTGGTCTTGTACGTGGTCCCTaGTCCCTGCACGTGGGTGAGCAGTCCCCTCCACGTCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LRPCFSSSVGLVRGP*SLHVGEQSPPRLPE
Trigger: CTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCAGGGAGCAGGGACCACGTACAAGACCAACAGAAGAGGAAAAACAGGGTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp AGCAGCGATGACAGTGATGGTGGTTGCCACCTGAGGAGCAGGGTTTaGGCCTTCCCTGTCCTGGCTCCAGCTAGGGGGTGTCTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSDDSDGGCHLRSRV*AFPVLAPARGCLLN
Trigger: ATTCAGAAGACACCCCCTAGCTGGAGCCAGGACAGGGAAGGCGCAAACCCTGCTCCTCAGGTGGCAACCACCATCACTGTCATCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CAGCCGGGCCTGGCTCTTCTTCTGTTGCAGGTTGGTGGTGCCTCCTaGCTTTTGCTTGGCCTTCAGGAAGTTGCTGATGATGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QPGLALLLLQVGGAS*LLLGLQEVADDEPG
Trigger: CCCAGGCTCATCATCAGCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGCTATGCACAGCATCTTaGGATTCTGGACAACAGTCC +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWLCTAS*DSGQQS
Trigger: GGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAG...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTCACAGCAAGGTTTGTaGCACGTCAGCTTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWSQQGL*HVSLKS
Trigger: ACTCTTCAAGCTGACGTGCAACAAACCTTGCTGTGA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp TGCACGTGGGTGAGCAGTCCCCTCCACGTCTGCCAGAGCCCTCGGTaGTATGCACAGCATCTTTGGATTCTGGACAACAGTCCAGAATGG +
Preference number: 5 (lower is better)
Translates to: CTWVSSPLHVCQSPR*YAQHLWILDNSPEW
Trigger: CCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GCAAGCATGCTGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTaGTGGATGTTGAAATGCACCGGCACAGATGGGCTGCAGTATGAG +
Preference number: 5 (lower is better)
Translates to: ASMLEGTEATKWPQS*WMLKCTGTDGLQYE
Trigger: CTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CAGTGTTCCTATCCACGCGGGCCTCCAGGTTATGCAGTCCGACCATaGTATAGGCTGGGGGACAACGAGAGTTGCCATCTGTGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: QCSYPRGPPGYAVRP*YRLGDNESCHLCRQ
Trigger: TTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCATGGTCGGACTGCATAACCTGGAGGCCCGCGTGGATAGGAACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGTGCCTAGGTAAACTATaGGCTCATCTTCCTGTTTCG +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWCLGKL*AHLPVS
Trigger: CGAAACAGGAAGATGAGCCAATAGTTTACCTAGGCA...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp TGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGTTaGAATGCACCGGCACAGATGGGCTGCAGTATGAGGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: WRAQRPQSGRSLAGC*NAPAQMGCSMRLIW
Trigger: CCAAATCAGCCTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GTGGGTGAGCAGTCCCCTCCACGTCTGCCAGAGCCCTCGGTGCTATaGACAGCATCTTTGGATTCTGGACAACAGTCCAGAATGGAACAG +
Preference number: 5 (lower is better)
Translates to: VGEQSPPRLPEPSVL*TASLDSGQQSRMEQ
Trigger: CTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCTGAGGAGCAGGGTTaGCGCCTTCCCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPEEQG*RLPCPG
Trigger: GCCAGGACAGGGAAGGCGCAAACCCTGCTCCTCAGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp TTTGCCAGAGGTGAGAAAGTGGCCGCTGAGGTCTTGCTGCTTCCCTaGGGCCGGTTCCTTCACAAGAGAGCAGTAGTCGTTCTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: FARGEKVAAEVLLLP*GRFLHKRAVVVLKV
Trigger: CACCTTGAGAACGACTACTGCTCTCTTGTGAAGGAACCGGCCTCAGGGAAGCAGCAAGACCTCAGCGGCCACTTTCTCACCTCTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GGCCAGCTGTTGGCTGATGATCACTTCGCAAGCAGAAGCAGTTCTTaGAAGACCCGGGTTTCCAGATGTGCTCCACAAAGTCGCTGCACG +
Preference number: 5 (lower is better)
Translates to: GQLLADDHFASRSSS*KTRVSRCAPQSRCT
Trigger: CGTGCAGCGACTTTGTGGAGCACATCTGGAAACCCGGGTCTTGCAAGAACTGCTTCTGCTTGCGAAGTGATCATCAGCCAACAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GGCACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGTTGAAATaGACCGGCACAGATGGGCTGCAGTATGAGGCTGATTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GTEATKWPQSCWMLK*TGTDGLQYEADLGS
Trigger: AGAACCCAAATCAGCCTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CCCCTCCACGTCTGCCAGAGCCCTCGGTGCTATGCACAGCATCTTTaGATTCTGGACAACAGTCCAGAATGGAACAGTACTCCCCACCTT +
Preference number: 5 (lower is better)
Translates to: PLHVCQSPRCYAQHL*ILDNSPEWNSTPHL
Trigger: AAGGTGGGGAGTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CCAGAGTTAGTTTTGCTGTTCTGCCCAGAGGTGCCATCGATGGGATaGAGACGGTGCCAGGTAGAGGAGTTTGAATGGTCTGCGGTACCG +
Preference number: 5 (lower is better)
Translates to: PELVLLFCPEVPSMG*RRCQVEEFEWSAVP
Trigger: CGGTACCGCAGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCAGGGCCTGGGGCCCTaGGGGCAGCTGGATGTCATC +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQQGLGP*GQLDVI
Trigger: GATGACATCCAGCTGCCCCAAGGGCCCCAGGCCCTG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTTAAGGGATGGCTTCTaGGGGCCCAGGCGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQLRDGF*GPRRGG
Trigger: CCCGCCCCGCCTGGGCCCCAAGAAGCCATCCCTTAA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGGGCATGGGGCAGGCGTGGAAGGCGGTGGCGATGGAATGGAAGTCAGAACTGCTCTaGTTCATTTTTAACAGGTGC +
Preference number: 5 (lower is better)
Translates to: CRQGKGMGQAWKAVAMEWKSELL*FIFNRC
Trigger: GCACCTGTTAAAAATGAACAAGAGCAGTTCTGACTT...CCATTCCATCGCCACCGCCTTCCACGCCTGCCCCATGCCCTTGCCTTGCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCGCACCTCGAATGGGTaGGGCTGGTGGAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGRTSNG*GWWSSS
Trigger: TGAGCTGCTCCACCAGCCCAACCCATTCGAGGTGCG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp AGAGGTGCCATCGATGGGATGGAGACGGTGCCAGGTAGAGGAGTTTaGATGGTCTGCGGTACCGTTTTCCAACTCTCTCCCCCAACTTTG +
Preference number: 5 (lower is better)
Translates to: RGAIDGMETVPGRGV*MVCGTVFQLSPPTL
Trigger: CAAAGTTGGGGGAGAGAGTTGGAAAACGGTACCGCAGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCATCGATGGCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GTTTTGCTGTTCTGCCCAGAGGTGCCATCGATGGGATGGAGACGGTaGCAGGTAGAGGAGTTTGAATGGTCTGCGGTACCGTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: VLLFCPEVPSMGWRR*QVEEFEWSAVPFSN
Trigger: GTTGGAAAACGGTACCGCAGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GCAAAGGAAGCCGATTTGCTCATCCCAGAGTTAGTTTTGCTGTTCTaGCCAGAGGTGCCATCGATGGGATGGAGACGGTGCCAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: AKEADLLIPELVLLF*PEVPSMGWRRCQVE
Trigger: CTCTACCTGGCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GGTGAAGCTGACGTGGGCCCCTCTGAAGGACGGGCTGAGGCTTTCTaGAGAACTCTGGCTCACTTTTTCCAAGTCAGAACTGCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: GEADVGPSEGRAEAF*RTLAHFFQVRTALV
Trigger: AACAAGAGCAGTTCTGACTTGGAAAAAGTGAGCCAGAGTTCTGCAGAAAGCCTCAGCCCGTCCTTCAGAGGGGCCCACGTCAGCTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp AGTCGGAGGTCTCAGAAGTCATCATGGTGGGCTTTACAGCAATGGTaGGCTTTGAGTAGGCCAAGCCATTCACGCCTTCGTCGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: SRRSQKSSWWALQQW*ALSRPSHSRLRRLG
Trigger: GCCTAGACGACGAAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCTCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CGGTGCTATGCACAGCATCTTTGGATTCTGGACAACAGTCCAGAATaGAACAGTACTCCCCACCTTCGCTGTCTCCTGAGGGTGAGCACC +
Preference number: 5 (lower is better)
Translates to: RCYAQHLWILDNSPE*NSTPHLRCLLRVST
Trigger: GGTGCTCACCCTCAGGAGACAGCGAAGGTGGGGAGTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCTGTTGGCTCTAGCCTaGGGATGGCCAGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGLLALA*GWPAVG
Trigger: GCCAACAGCTGGCCATCCCAAGGCTAGAGCCAACAG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGCAGGCAAGAGGGCTaGCAGGCTTCTGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGCRQEG*QASAVL
Trigger: GAGGACTGCAGAAGCCTGCAAGCCCTCTTGCCTGCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGCTTAGGTTCAGCTaGGGACTTGCCGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGWLRFS*GLAVRG
Trigger: GCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGGGGCCCAGGGAGCATaGCCTTTGAAAGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGGAQGA*PLKAFP
Trigger: GGGGAAAGCTTTCAAAGGCAATGCTCCCTGGGCCCC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp TCAGGCTGGCTTCAGTCCACAAGTCGGAGGTCTCAGAAGTCATCATaGTGGGCTTTACAGCAATGGTGGGCTTTGAGTAGGCCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SGWLQSTSRRSQKSS*WALQQWWALSRPSH
Trigger: ATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCTCCGACTTGTGGACTGAAGCCAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GTAAACTATTGGCTCATCTTCCTGTTTCGGGAGCAGGAGCTTGCCTaGGGTTCGTCTCCAATTGACCTTTGGGACTTCAGCGCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: VNYWLIFLFREQELA*GSSPIDLWDFSAQA
Trigger: AGCCTGAGCGCTGAAGTCCCAAAGGTCAATTGGAGACGAACCCCAGGCAAGCTCCTGCTCCCGAAACAGGAAGATGAGCCAATAGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp ATGGCAGGCTTCTCTTTGGCCGTGTTTTCAGTCACATTATGTGGATaGCTCTCCCTTGAGGTTAGCCCCTGCGCAACCAAAGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MAGFSLAVFSVTLCG*LSLEVSPCATKGSS
Trigger: AGAGGAGCCTTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGTGACTGAAAACACGGCCAAAGAGAAGCCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp TTTTCAGTCACATTATGTGGATGGCTCTCCCTTGAGGTTAGCCCCTaGGCAACCAAAGGCTCCTCTTCACCGGCTTGTAAGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: FSVTLCGWLSLEVSP*ATKGSSSPACKSWF
Trigger: GAACCAGGACTTACAAGCCGGTGAAGAGGAGCCTTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGTGACTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 90 bp GCAAACTTCATCATCATCAGTGCTCGCTTCATGTCGATCCAGTTGTaGAGAGTGTTACACAGTACCTCCTCTGACGTGCACGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ANFIIISARFMSIQL*RVLHSTSSDVHGCS
Trigger: GGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTGGATCGACATGAAGCGAGCACTGATGATGATGAAGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp ACAAGTCGGAGGTCTCAGAAGTCATCATGGTGGGCTTTACAGCAATaGTGGGCTTTGAGTAGGCCAAGCCATTCACGCCTTCGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: TSRRSQKSSWWALQQ*WALSRPSHSRLRRL
Trigger: TAGACGACGAAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCTCCGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTGGCTTAGGGGAACCTaGGGTCCAGAAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGWLRGT*GPEEAI
Trigger: GATGGCTTCTTCTGGACCCAAGGTTCCCCTAAGCCA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCCTCCTGGCTTTTGCTaGGCCTTCAGGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGPPGFC*AFRKLL
Trigger: CAGCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp CAGTTAAAAGGAGGCTCGTCATGGGCACAAACATTGGTTTCTGAATaGCTTAGGTTCAGCTTGGGACTTGCCGTCCGTGGCTTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: QLKGGSSWAQTLVSE*LRFSLGLAVRGLGE
Trigger: TTCCCCTAAGCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGACGAGCCTCCTTTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCACCAGTCTGGTATCTaGGCCGCCTCTGGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQHQSGI*AASGPR
Trigger: TCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCTGGCTCTTCTTCTGTaGCAGGTTGGTGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQLALLL*QVGGAS
Trigger: GGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 90 bp ATCCCCCGAGTCACAGCAAGGTTTGTTGCACGTCAGCTTGAAGAGTaGCCAGTAATTCTCATTGAAGCGCAGTTCCTTTTTCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: IPRVTARFVARQLEE*PVILIEAQFLFLAT
Trigger: GGTGGCCAGAAAAAGGAACTGCGCTTCAATGAGAATTACTGGTCACTCTTCAAGCTGACGTGCAACAAACCTTGCTGTGACTCGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCCTGGAAGCTCACTGGTaGAAAGGCAGTGTTCCTATC +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGLEAHW*KGSVPI
Trigger: GATAGGAACACTGCCTTTCAACCAGTGAGCTTCCAG...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCATCTGCCTCTGTCCTTaGGGAACTCAAACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGICLCP*GTQTQR
Trigger: CCTTTGCGTTTGAGTTCCCAAAGGACAGAGGCAGAT...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAAGCAGAAGCAGTTCTaGCAAGACCCGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQKQKQF*QDPGFQ
Trigger: CTGGAAACCCGGGTCTTGCAAGAACTGCTTCTGCTT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGTTTTTCCTCTTCTGTaGGTCTTGTACGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGVFPLL*VLYVVP
Trigger: AGGGACCACGTACAAGACCAACAGAAGAGGAAAAAC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCGCAAAGGAAGCCGATTaGCTCATCCCAGAGTTAGTT +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGAKEAD*LIPELV
Trigger: AACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGC...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCAGGGAGCATTGCCTTaGAAAGCTTTCCCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQQGALP*KAFPKG
Trigger: GCCTTTGGGGAAAGCTTTCAAAGGCAATGCTCCCTG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGATGGCAGGCTTCTCTTaGGCCGTGTTTTCAGTCACA +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQMAGFS*AVFSVT
Trigger: TGTGACTGAAAACACGGCCAAAGAGAAGCCTGCCAT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGCAGTCTTGCTGGATGTaGAAATGCACCGGCACAGAT +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQQSCWM*KCTGTD
Trigger: ATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTG...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGAAAGTGGCCGCAGTCTaGCTGGATGTTGAAATGCAC +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQKVAAV*LDVEMH
Trigger: GTGCATTTCAACATCCAGCAAGACTGCGGCCACTTT...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp CATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGGCTTCATGTCGATCCAGTaGTGCAGAGTGTTACACAGT +
Preference number: 5 (lower is better)
Translates to: HPRTTVICTISQGNPDAGFMSIQ*CRVLHS
Trigger: ACTGTGTAACACTCTGCACAACTGGATCGACATGAA...GCCTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 90 bp GAACGGTTTCCAGAGTTCAAGGAACAGTTAAAAGGAGGCTCGTCATaGGCACAAACATTGGTTTCTGAATGGCTTAGGTTCAGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: ERFPEFKEQLKGGSS*AQTLVSEWLRFSLG
Trigger: TCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGACGAGCCTCCTTTTAACTGTTCCTTGAACTCTGGAAACCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS-3UTR CAA 90 bp TACATCCAAGGACAACAGTCATTTGTACCATTTCCCAGGGTAATCCGGATGCAGTCATGGGCACAAACATaGGTTTCTGAATGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: YIQGQQSFVPFPRVIRMQSWAQT*VSEWLR
Trigger: CCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGA...CTGCATCCGGATTACCCTGGGAAATGGTACAAATGACTGTTGTCCTTGGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCTGCTTCTCACCAGGCCCTCCCTGGCAGGCAGTGGTaGCTGCGGGCGCGGCAGAAGGGCACCTGGATGTGG +
Preference number: 6 (lower is better)
Translates to: AASHQALPGRQW*LRARQKGTWMW
Trigger: CCACATCCAGGTGCCCTTCTGCCGCGCCCGCAGCCACCACTGCCTGCCAGGGAGGGCCTGGTGAGAAGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CGAGTTGCTGCAGGCCGGGAGAGTAGAGGGACAGTGTaGGCAGCGGGGGTAAGTCCTCCCGCCGGTAGTCGC +
Preference number: 6 (lower is better)
Translates to: RVAAGRESRGTV*AAGVSPPAGSR
Trigger: GCGACTACCGGCGGGAGGACTTACCCCCGCTGCCCACACTGTCCCTCTACTCTCCCGGCCTGCAGCAACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp GGCACGGTAGGAGTGGCAGAGGGCCCGGGGGAGCTCTaGGGGTTACAGTGCGCCAGCAGCAGGTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GTVGVAEGPGEL*GLQCASSRFSR
Trigger: TCTGGAGAACCTGCTGCTGGCGCACTGTAACCCTCAGAGCTCCCCCGGGCCCTCTGCCACTCCTACCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GTCCATACTTGGCCCTGGCTATGGCCAGCTGGGACCTaGTCTTTCTTGGGCTCGGGCCTCGGAGGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: VHTWPWLWPAGT*SFLGSGLGGPG
Trigger: TCCGGGGCCTCCGAGGCCCGAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp TCCACCAGCTCCCGCCGTGGCCCCCACAGCAAGCACTaGAGCACCCGCTTAGCTTCACCTATGCGGATGCGC +
Preference number: 6 (lower is better)
Translates to: STSSRRGPHSKH*STRLASPMRMR
Trigger: GCGCATCCGCATAGGTGAAGCTAAGCGGGTGCTGCAGTGCTTGCTGTGGGGGCCACGGCGGGAGCTGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CGGGCCTCGGAGGCCCCGGAGCTGCCTTCTTCCTCTTaGCGCTTTCGGCGTAGATGGGTTCAGGCTGCACAG +
Preference number: 6 (lower is better)
Translates to: RASEAPELPSSS*RFRRRWVQAAQ
Trigger: CTGTGCAGCCTGAACCCATCTACGCCGAAAGCGCCAAGAGGAAGAAGGCAGCTCCGGGGCCTCCGAGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GAAGAGCTGGCGGCCTCAGAGTTAAGGGATGGCTTCTaGGGGCCCAGGCGGGGCGGGTTCGCTGTGGATCCC +
Preference number: 6 (lower is better)
Translates to: EELAASELRDGF*GPRRGGFAVDP
Trigger: GGGATCCACAGCGAACCCGCCCCGCCTGGGCCCCAAGAAGCCATCCCTTAACTCTGAGGCCGCCAGCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp TGGTCTTGTACGTGGTCCCTGCTCCCTGCACGTGGGTaGGCAGTCCCCTCCACGTCTGCCAGAGCCCTCGGT +
Preference number: 6 (lower is better)
Translates to: WSCTWSLLPARG*AVPSTSARALG
Trigger: ACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCAGGGAGCAGGGACCACGTACAAGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GGGCCTGGGGCCCTTGGGGCAGCTGGATGTCATCCCTaGAAAGGCAGCCAGCTTCTGGCGAAAGCTCTCGTG +
Preference number: 6 (lower is better)
Translates to: GPGALGAAGCHP*KGSQLLAKALV
Trigger: CACGAGAGCTTTCGCCAGAAGCTGGCTGCCTTTGCAGGGATGACATCCAGCTGCCCCAAGGGCCCCAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp CTCTTTCTTGGGCTCGGGCCTCGGAGGCCCCGGAGCTaGCTTCTTCCTCTTGGCGCTTTCGGCGTAGATGGG +
Preference number: 6 (lower is better)
Translates to: LFLGLGPRRPRS*LLPLGAFGVDG
Trigger: CCCATCTACGCCGAAAGCGCCAAGAGGAAGAAGGCAGCTCCGGGGCCTCCGAGGCCCGAGCCCAAGAAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GCTCCCTGCACGTGGGTGAGCAGTCCCCTCCACGTCTaGCAGAGCCCTCGGTGCTATGCACAGCATCTTTGG +
Preference number: 6 (lower is better)
Translates to: APCTWVSSPLHV*QSPRCYAQHLW
Trigger: CCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCACCCACGTGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp AGAGTGTTACACAGTACCTCCTCTGACGTGCACGGCTaGTCCACCAGCTCCCGCCGTGGCCCCCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: RVLHSTSSDVHG*STSSRRGPHSK
Trigger: CTTGCTGTGGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp AGTTGTGCAGAGTGTTACACAGTACCTCCTCTGACGTaGACGGCTGCTCCACCAGCTCCCGCCGTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: SCAECYTVPPLT*TAAPPAPAVAP
Trigger: GGGGGCCACGGCGGGAGCTGGTGGAGCAGCCGTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TCACGCCTTCGTCGTCTAGGCGGCAATTCTCAGGCCTaGCAGGCAGGCGAGTTCCAGCGGGTAGGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SRLRRLGGNSQA*QAGEFQRVGCW
Trigger: CCAACAGCCTACCCGCTGGAACTCGCCTGCCTGCCAGGCCTGAGAATTGCCGCCTAGACGACGAAGGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TCCTGCCCCACCTCCTCCTCCTCTTCTATCCGGCACTaGCGGCTCCAAGCACCAGTCTGGTATCTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: SCPTSSSSSIRH*RLQAPVWYLGR
Trigger: GCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCGGATAGAAGAGGAGGAGGAGGTGGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TGGGAGGCAGACACGATCTCGGGAGCCAGCCGGGCCTaGCTCTTCTTCTGTTGCAGGTTGGTGGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: WEADTISGASRA*LFFCCRLVVPP
Trigger: AGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCCCGAGATCGTGTCTGCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp CCTCTTCTATCCGGCACTGGCGGCTCCAAGCACCAGTCTGGTATCTaGGCCGCCTCTGGTCCAAGACTGAAGAGGAGGTGGCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: PLLSGTGGSKHQSGI*AASGPRLKRRWLVG
Trigger: CCCCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCGGATAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp GGCCCCCAAGCTTGGCATAGGTGCCCTCCTTGCTGCTaGTGCTACTCAGCAGGCTGTGCAGCTGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GPQAWHRCPPCC*CYSAGCAAEAG
Trigger: CCCAGCTTCAGCTGCACAGCCTGCTGAGTAGCATCAGCAGCAAGGAGGGCACCTATGCCAAGCTTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp CCAGCAGCAGGTTCTCCAGACACAGGTCCCGGTGGATaGTCCCGTGTTCCTTCAGGTGCTCCAGCCCGTTGC +
Preference number: 6 (lower is better)
Translates to: PAAGSPDTGPGG*SRVPSGAPARC
Trigger: GCAACGGGCTGGAGCACCTGAAGGAACACGGGATCATCCACCGGGACCTGTGTCTGGAGAACCTGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp ATCACCTGTCCATACTTGGCCCTGGCTATGGCCAGCTaGGACCTGCTCTTTCTTGGGCTCGGGCCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: ITCPYLALAMAS*DLLFLGLGPRR
Trigger: CCTCCGAGGCCCGAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGACAGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCAACCAAAGGCTCCTCTTCACCGGCTTGTAAGTCCTaGTTCGAAGGCCCACGTGGCCACTGCACCCCCACG +
Preference number: 6 (lower is better)
Translates to: ATKGSSSPACKS*FEGPRGHCTPT
Trigger: CGTGGGGGTGCAGTGGCCACGTGGGCCTTCGAACCAGGACTTACAAGCCGGTGAAGAGGAGCCTTTGGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCTAGGCTATCTGTGGAGCCCGTGGTGAAGCTGACGTaGGCCCCTCTGAAGGACGGGCTGAGGCTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: ARLSVEPVVKLT*APLKDGLRLSA
Trigger: TGCAGAAAGCCTCAGCCCGTCCTTCAGAGGGGCCCACGTCAGCTTCACCACGGGCTCCACAGATAGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCTGCGCAGGACCACCACCAGGGGACACATCCTCTGTaGAGCCTGATGGAAAAGGGACGGGAGCGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: AAQDHHQGTHPL*SLMEKGRERRA
Trigger: AGCTCTTCGCTCCCGTCCCTTTTCCATCAGGCTCCACAGAGGATGTGTCCCCTGGTGGTGGTCCTGCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp TCCGGCACTGGCGGCTCCAAGCACCAGTCTGGTATCTaGGCCGCCTCTGGTCCAAGACTGAAGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SGTGGSKHQSGI*AASGPRLKRRW
Trigger: CCACCTCCTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp CAGCTTGGGACTTGCCGTCCGTGGCTTAGGGGAACCTaGGGTCCAGAAGAAGCCATCAGGGGAAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: QLGTCRPWLRGT*GPEEAIRGRGG
Trigger: GCCGCCTCTTCCCCTGATGGCTTCTTCTGGACCCAAGGTTCCCCTAAGCCACGGACGGCAAGTCCCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp TGGATGATCCCGTGTTCCTTCAGGTGCTCCAGCCCGTaGCAGAGCTGCAGAAGCAGGAAGCACACCCGGCGC +
Preference number: 6 (lower is better)
Translates to: WMIPCSFRCSSP*QSCRSRKHTRR
Trigger: GCGCCGGGTGTGCTTCCTGCTTCTGCAGCTCTGCAACGGGCTGGAGCACCTGAAGGAACACGGGATCATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp CGCCTCTGGTCCAAGACTGAAGAGGAGGTGGCTGGTGGGGGACACTaGGCAGAGTCACCAGCAGTGGCAACGCCATTGGTGTGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: RLWSKTEEEVAGGGH*AESPAVATPLVWQE
Trigger: TTCCTGCCACACCAATGGCGTTGCCACTGCTGGTGACTCTGCCAAGTGTCCCCCACCAGCCACCTCCTCTTCAGTCTTGGACCAGAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp GGCAGACACGATCTCGGGAGCCAGCCGGGCCTGGCTCTTCTTCTGTaGCAGGTTGGTGGTGCCTCCTGGCTTTTGCTTGGCCTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: GRHDLGSQPGLALLL*QVGGASWLLLGLQE
Trigger: TTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCCCGAGATCGTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TGGGTTCATATGATGGACCTCCATCGCTGCAGGGCCTaGAGTCCGAGGCTAGGCTATCTGTGGAGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: WVHMMDLHRCRA*SPRLGYLWSPW
Trigger: CCACGGGCTCCACAGATAGCCTAGCCTCGGACTCCAGGCCCTGCAGCGATGGAGGTCCATCATATGAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp AGCTTGGGACTTGCCGTCCGTGGCTTAGGGGAACCTTaGGTCCAGAAGAAGCCATCAGGGGAAGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: SLGLAVRGLGEP*VQKKPSGEEAA
Trigger: TGCCGCCTCTTCCCCTGATGGCTTCTTCTGGACCCAAGGTTCCCCTAAGCCACGGACGGCAAGTCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GAGCCAGCCGGGCCTGGCTCTTCTTCTGTTGCAGGTTaGTGGTGCCTCCTGGCTTTTGCTTGGCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: EPAGPGSSSVAG*WCLLAFAWPSG
Trigger: TCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp ACGATCTCGGGAGCCAGCCGGGCCTGGCTCTTCTTCTGTTGCAGGTaGGTGGTGCCTCCTGGCTTTTGCTTGGCCTTCAGGAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: TISGASRAWLFFCCR*VVPPGFCLAFRKLL
Trigger: CAGCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGGCTCCCGAGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp TCCCTAAGAAGGGAGGCGGGCTGGAGTTCCGCAGCTTaGCCCACACATTTGCCAGAGGTGAGAAAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: SLRREAGWSSAA*PTHLPEVRKWP
Trigger: CGGCCACTTTCTCACCTCTGGCAAATGTGTGGGTCAAGCTGCGGAACTCCAGCCCGCCTCCCTTCTTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp CTGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTaGTGGATGTTGAAATGCACCGGCACAGATGGGCTG +
Preference number: 6 (lower is better)
Translates to: LEGTEATKWPQS*WMLKCTGTDGL
Trigger: CAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GCCGGGCCTGGCTCTTCTTCTGTTGCAGGTTGGTGGTaGCTCCTGGCTTTTGCTTGGCCTTCAGGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: AGPGSSSVAGWW*LLAFAWPSGSC
Trigger: GCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp ATCCAGGTATCACCTGTCCATACTTGGCCCTGGCTATaGCCAGCTGGGACCTGCTCTTTCTTGGGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: IQVSPVHTWPWL*PAGTCSFLGSG
Trigger: GCCCGAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGACAGGTGATACCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TGGCTGGTGGGGGACACTTGGCAGAGTCACCAGCAGTaGCAACGCCATTGGTGTGGCAGGAAGACGTTAGGT +
Preference number: 6 (lower is better)
Translates to: WLVGDTWQSHQQ*QRHWCGRKTLG
Trigger: ACCTAACGTCTTCCTGCCACACCAATGGCGTTGCCACTGCTGGTGACTCTGCCAAGTGTCCCCCACCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GAGGCAAGCATGCTGGAGGGCACAGAGGCCACAAAGTaGCCGCAGTCTTGCTGGATGTTGAAATGCACCGGC +
Preference number: 6 (lower is better)
Translates to: EASMLEGTEATK*PQSCWMLKCTG
Trigger: GCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CCAGCCGGGCCTGGCTCTTCTTCTGTTGCAGGTTGGTaGTGCCTCCTGGCTTTTGCTTGGCCTTCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: PAGPGSSSVAGW*CLLAFAWPSGS
Trigger: ACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAGGCCCGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GTCCCTAAGAAGGGAGGCGGGCTGGAGTTCCGCAGCTaGACCCACACATTTGCCAGAGGTGAGAAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: VPKKGGGLEFRS*THTFARGEKVA
Trigger: GGCCACTTTCTCACCTCTGGCAAATGTGTGGGTCAAGCTGCGGAACTCCAGCCCGCCTCCCTTCTTAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GCTGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTaGCTGGATGTTGAAATGCACCGGCACAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: AGGHRGHKVAAV*LDVEMHRHRWA
Trigger: AGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp CCAGCTAGGGGGTGTCTTCTGAATCCAGGTATCACCTGTCCATACTaGGCCCTGGCTATGGCCAGCTGGGACCTGCTCTTTCTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: PARGCLLNPGITCPY*ALAMASWDLLFLGL
Trigger: GAGCCCAAGAAAGAGCAGGTCCCAGCTGGCCATAGCCAGGGCCAAGTATGGACAGGTGATACCTGGATTCAGAAGACACCCCCTAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp CCTTCCCTGTCCTGGCTCCAGCTAGGGGGTGTCTTCTaGATCCAGGTATCACCTGTCCATACTTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: PSLSWLQLGGVF*IQVSPVHTWPW
Trigger: CCAGGGCCAAGTATGGACAGGTGATACCTGGATTCAGAAGACACCCCCTAGCTGGAGCCAGGACAGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp TGGTATAGGCTGGGGGACAACGAGAGTTGCCATCTGTaGAGGCAAGAGGGCTTGCAGGCTTCTGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: WYRLGDNESCHL*RQEGLQASAVL
Trigger: GAGGACTGCAGAAGCCTGCAAGCCCTCTTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp TTGCCAGAGGTGAGAAAGTGGCCGCTGAGGTCTTGCTaGTTCCCTGAGGCCGGTTCCTTCACAAGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LPEVRKWPLRSC*FPEAGSFTREQ
Trigger: CTGCTCTCTTGTGAAGGAACCGGCCTCAGGGAAGCAGCAAGACCTCAGCGGCCACTTTCTCACCTCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GGCCTCCAGGTTATGCAGTCCGACCATGGTATAGGCTaGGGGACAACGAGAGTTGCCATCTGTGCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: GLQVMQSDHGIG*GTTRVAICAGK
Trigger: CTTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCATGGTCGGACTGCATAACCTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TATCCACGCGGGCCTCCAGGTTATGCAGTCCGACCATaGTATAGGCTGGGGGACAACGAGAGTTGCCATCTG +
Preference number: 6 (lower is better)
Translates to: YPRGPPGYAVRP*YRLGDNESCHL
Trigger: CAGATGGCAACTCTCGTTGTCCCCCAGCCTATACCATGGTCGGACTGCATAACCTGGAGGCCCGCGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TCTTCTATCCGGCACTGGCGGCTCCAAGCACCAGTCTaGTATCTTGGCCGCCTCTGGTCCAAGACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: SSIRHWRLQAPV*YLGRLWSKTEE
Trigger: CTCTTCAGTCTTGGACCAGAGGCGGCCAAGATACCAGACTGGTGCTTGGAGCCGCCAGTGCCGGATAGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TGTCTTTGCTGGATGTGTCAGGGGAGGCAAGCATGCTaGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: CLCWMCQGRQAC*RAQRPQSGRSL
Trigger: AAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAGCATGCTTGCCTCCCCTGACACATCCAGCAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GACAACGAGAGTTGCCATCTGTGCAGGCAAGAGGGCTaGCAGGCTTCTGCAGTCCTCGGAAGCTGCCTAGGT +
Preference number: 6 (lower is better)
Translates to: DNESCHLCRQEG*QASAVLGSCLG
Trigger: ACCTAGGCAGCTTCCGAGGACTGCAGAAGCCTGCAAGCCCTCTTGCCTGCACAGATGGCAACTCTCGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp AGGCTGGGGGACAACGAGAGTTGCCATCTGTGCAGGCAAGAGGGCTaGCAGGCTTCTGCAGTCCTCGGAAGCTGCCTAGGTAAACTATTG +
Preference number: 6 (lower is better)
Translates to: RLGDNESCHLCRQEG*QASAVLGSCLGKLL
Trigger: CAATAGTTTACCTAGGCAGCTTCCGAGGACTGCAGAAGCCTGCAAGCCCTCTTGCCTGCACAGATGGCAACTCTCGTTGTCCCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp CACAGCACTCTCTGGGGAAGCTCAGACCCTGTTTTTCCTCTTCTGTaGGTCTTGTACGTGGTCCCTGCTCCCTGCACGTGGGTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: HSTLWGSSDPVFPLL*VLYVVPAPCTWVSS
Trigger: ACTGCTCACCCACGTGCAGGGAGCAGGGACCACGTACAAGACCAACAGAAGAGGAAAAACAGGGTCTGAGCTTCCCCAGAGAGTGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp CTGGAGGGCACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGTaGAAATGCACCGGCACAGATGGGCTGCAGTATGAGGCTGATTTG +
Preference number: 6 (lower is better)
Translates to: LEGTEATKWPQSCWM*KCTGTDGLQYEADL
Trigger: CAAATCAGCCTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGTGCCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp CAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGTTaGAATGCACCGGCACAGATGGGCTGCAGTATGAGG +
Preference number: 6 (lower is better)
Translates to: QRPQSGRSLAGC*NAPAQMGCSMR
Trigger: CCTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GTGAGCAGTCCCCTCCACGTCTGCCAGAGCCCTCGGTaGTATGCACAGCATCTTTGGATTCTGGACAACAGT +
Preference number: 6 (lower is better)
Translates to: VSSPLHVCQSPR*YAQHLWILDNS
Trigger: ACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACGTGGAGGGGACTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp CATTTGCCAGAGGTGAGAAAGTGGCCGCTGAGGTCTTaGTGCTTCCCTGAGGCCGGTTCCTTCACAAGAGAG +
Preference number: 6 (lower is better)
Translates to: HLPEVRKWPLRS*CFPEAGSFTRE
Trigger: CTCTCTTGTGAAGGAACCGGCCTCAGGGAAGCAGCAAGACCTCAGCGGCCACTTTCTCACCTCTGGCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TCTGGGGAAGCTCAGACCCTGTTTTTCCTCTTCTGTTaGTCTTGTACGTGGTCCCTGCTCCCTGCACGTGGG +
Preference number: 6 (lower is better)
Translates to: SGEAQTLFFLFC*SCTWSLLPARG
Trigger: CCCACGTGCAGGGAGCAGGGACCACGTACAAGACCAACAGAAGAGGAAAAACAGGGTCTGAGCTTCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCGGGTTCGCTGTGGATCCCTGACCACAGCACTCTCTaGGGAAGCTCAGACCCTGTTTTTCCTCTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: AGSLWIPDHSTL*GSSDPVFPLLL
Trigger: CAACAGAAGAGGAAAAACAGGGTCTGAGCTTCCCCAGAGAGTGCTGTGGTCAGGGATCCACAGCGAACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GGAGCGAAGAGCTTTTTCCCGCTGATGGTGGGTGAGTaGGTGGGTTCATATGATGGACCTCCATCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GAKSFFPLMVGE*VGSYDGPPSLQ
Trigger: CTGCAGCGATGGAGGTCCATCATATGAACCCACCCACTCACCCACCATCAGCGGGAAAAAGCTCTTCGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GGAAGCTCAGACCCTGTTTTTCCTCTTCTGTTGGTCTaGTACGTGGTCCCTGCTCCCTGCACGTGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: GSSDPVFPLLLV*YVVPAPCTWVS
Trigger: GCTCACCCACGTGCAGGGAGCAGGGACCACGTACAAGACCAACAGAAGAGGAAAAACAGGGTCTGAGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp TGCAGCACCCGCTTAGCTTCACCTATGCGGATGCGCTaGATGGGATCAGCCTCAAGCAGTAGATGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: CSTRLASPMRMR*MGSASSSRWAS
Trigger: ACTCGCCCATCTACTGCTTGAGGCTGATCCCATCAAGCGCATCCGCATAGGTGAAGCTAAGCGGGTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GCCGATTTGCTCATCCCAGAGTTAGTTTTGCTGTTCTaGCCAGAGGTGCCATCGATGGGATGGAGACGGTGC +
Preference number: 6 (lower is better)
Translates to: ADLLIPELVLLF*PEVPSMGWRRC
Trigger: GCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GACGTGGGCCCCTCTGAAGGACGGGCTGAGGCTTTCTaGAGAACTCTGGCTCACTTTTTCCAAGTCAGAACT +
Preference number: 6 (lower is better)
Translates to: DVGPSEGRAEAF*RTLAHFFQVRT
Trigger: AGTTCTGACTTGGAAAAAGTGAGCCAGAGTTCTGCAGAAAGCCTCAGCCCGTCCTTCAGAGGGGCCCACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp GCCACAAAGTGGCCGCAGTCTTGCTGGATGTTGAAATaGACCGGCACAGATGGGCTGCAGTATGAGGCTGAT +
Preference number: 6 (lower is better)
Translates to: ATKWPQSCWMLK*TGTDGLQYEAD
Trigger: ATCAGCCTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TGGCTCATCTTCCTGTTTCGGGAGCAGGAGCTTGCCTaGGGTTCGTCTCCAATTGACCTTTGGGACTTCAGC +
Preference number: 6 (lower is better)
Translates to: WLIFLFREQELA*GSSPIDLWDFS
Trigger: GCTGAAGTCCCAAAGGTCAATTGGAGACGAACCCCAGGCAAGCTCCTGCTCCCGAAACAGGAAGATGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GGAGGCTCGTCATGGGCACAAACATTGGTTTCTGAATaGCTTAGGTTCAGCTTGGGACTTGCCGTCCGTGGC +
Preference number: 6 (lower is better)
Translates to: GGSSWAQTLVSE*LRFSLGLAVRG
Trigger: GCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGACGAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp ACAGAGGCCACAAAGTGGCCGCAGTCTTGCTGGATGTaGAAATGCACCGGCACAGATGGGCTGCAGTATGAG +
Preference number: 6 (lower is better)
Translates to: TEATKWPQSCWM*KCTGTDGLQYE
Trigger: CTCATACTGCAGCCCATCTGTGCCGGTGCATTTCAACATCCAGCAAGACTGCGGCCACTTTGTGGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp TTCTGTTGCAGGTTGGTGGTGCCTCCTGGCTTTTGCTaGGCCTTCAGGAAGTTGCTGATGATGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: FCCRLVVPPGFC*AFRKLLMMSLG
Trigger: GCCCAGGCTCATCATCAGCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp ATCGATGGGATGGAGACGGTGCCAGGTAGAGGAGTTTaGATGGTCTGCGGTACCGTTTTCCAACTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: IDGMETVPGRGV*MVCGTVFQLSP
Trigger: GGGAGAGAGTTGGAAAACGGTACCGCAGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCATCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp ATGGAAAAGGGACGGGAGCGAAGAGCTTTTTCCCGCTaGTGGTGGGTGAGTGGGTGGGTTCATATGATGGAC +
Preference number: 6 (lower is better)
Translates to: MEKGRERRAFSR*WWVSGWVHMMD
Trigger: GTCCATCATATGAACCCACCCACTCACCCACCATCAGCGGGAAAAAGCTCTTCGCTCCCGTCCCTTTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp ACATTATGTGGATGGCTCTCCCTTGAGGTTAGCCCCTaGGCAACCAAAGGCTCCTCTTCACCGGCTTGTAAG +
Preference number: 6 (lower is better)
Translates to: TLCGWLSLEVSP*ATKGSSSPACK
Trigger: CTTACAAGCCGGTGAAGAGGAGCCTTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp ATGGGATGGAGACGGTGCCAGGTAGAGGAGTTTGAATaGTCTGCGGTACCGTTTTCCAACTCTCTCCCCCAA +
Preference number: 6 (lower is better)
Translates to: MGWRRCQVEEFE*SAVPFSNSLPQ
Trigger: TTGGGGGAGAGAGTTGGAAAACGGTACCGCAGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GTTTTGCTGTTCTGCCCAGAGGTGCCATCGATGGGATaGAGACGGTGCCAGGTAGAGGAGTTTGAATGGTCT +
Preference number: 6 (lower is better)
Translates to: VLLFCPEVPSMG*RRCQVEEFEWS
Trigger: AGACCATTCAAACTCCTCTACCTGGCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp AGGTCTCAGAAGTCATCATGGTGGGCTTTACAGCAATGGTGGGCTTaGAGTAGGCCAAGCCATTCACGCCTTCGTCGTCTAGGCGGCAAT +
Preference number: 6 (lower is better)
Translates to: RSQKSSWWALQQWWA*SRPSHSRLRRLGGN
Trigger: ATTGCCGCCTAGACGACGAAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp TCTCTTTGGCCGTGTTTTCAGTCACATTATGTGGATGGCTCTCCCTaGAGGTTAGCCCCTGCGCAACCAAAGGCTCCTCTTCACCGGCTT +
Preference number: 6 (lower is better)
Translates to: SLWPCFQSHYVDGSP*RLAPAQPKAPLHRL
Trigger: AAGCCGGTGAAGAGGAGCCTTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGTGACTGAAAACACGGCCAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp TCGTCATGGGCACAAACATTGGTTTCTGAATGGCTTAGGTTCAGCTaGGGACTTGCCGTCCGTGGCTTAGGGGAACCTTGGGTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SSWAQTLVSEWLRFS*GLAVRGLGEPWVQK
Trigger: CTTCTGGACCCAAGGTTCCCCTAAGCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GCACAGCATCTTTGGATTCTGGACAACAGTCCAGAATaGAACAGTACTCCCCACCTTCGCTGTCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: AQHLWILDNSPE*NSTPHLRCLLR
Trigger: CCTCAGGAGACAGCGAAGGTGGGGAGTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp AGAGCCCTCGGTGCTATGCACAGCATCTTTGGATTCTaGACAACAGTCCAGAATGGAACAGTACTCCCCACC +
Preference number: 6 (lower is better)
Translates to: RALGAMHSIFGF*TTVQNGTVLPT
Trigger: GGTGGGGAGTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CTGGCTCTTCTTCTGTTGCAGGTTGGTGGTGCCTCCTaGCTTTTGCTTGGCCTTCAGGAAGTTGCTGATGAT +
Preference number: 6 (lower is better)
Translates to: LALLLLQVGGAS*LLLGLQEVADD
Trigger: ATCATCAGCAACTTCCTGAAGGCCAAGCAAAAGCCAGGAGGCACCACCAACCTGCAACAGAAGAAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp ACTATTGGCTCATCTTCCTGTTTCGGGAGCAGGAGCTaGCCTGGGGTTCGTCTCCAATTGACCTTTGGGACT +
Preference number: 6 (lower is better)
Translates to: TIGSSSCFGSRS*PGVRLQLTFGT
Trigger: AGTCCCAAAGGTCAATTGGAGACGAACCCCAGGCAAGCTCCTGCTCCCGAAACAGGAAGATGAGCCAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp CGTCTGCCAGAGCCCTCGGTGCTATGCACAGCATCTTaGGATTCTGGACAACAGTCCAGAATGGAACAGTAC +
Preference number: 6 (lower is better)
Translates to: RLPEPSVLCTAS*DSGQQSRMEQY
Trigger: GTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp CCGTGTTTTCAGTCACATTATGTGGATGGCTCTCCCTaGAGGTTAGCCCCTGCGCAACCAAAGGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PCFQSHYVDGSP*RLAPAQPKAPL
Trigger: AAGAGGAGCCTTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGTGACTGAAAACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GCAAAGGAAGCCGATTTGCTCATCCCAGAGTTAGTTTaGCTGTTCTGCCCAGAGGTGCCATCGATGGGATGG +
Preference number: 6 (lower is better)
Translates to: AKEADLLIPELV*LFCPEVPSMGW
Trigger: CCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GAGGGGGTGAGAATGCCTCCAATCTGCCTCTGTCCTTaGGGAACTCAAACGCAAAGGAAGCCGATTTGCTCA +
Preference number: 6 (lower is better)
Translates to: EGVRMPPICLCP*GTQTQRKPICS
Trigger: TGAGCAAATCGGCTTCCTTTGCGTTTGAGTTCCCAAAGGACAGAGGCAGATTGGAGGCATTCTCACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GCACAAACATTGGTTTCTGAATGGCTTAGGTTCAGCTaGGGACTTGCCGTCCGTGGCTTAGGGGAACCTTGG +
Preference number: 6 (lower is better)
Translates to: AQTLVSEWLRFS*GLAVRGLGEPW
Trigger: CCAAGGTTCCCCTAAGCCACGGACGGCAAGTCCCAAGCTGAACCTAAGCCATTCAGAAACCAATGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp AACTCAAACGCAAAGGAAGCCGATTTGCTCATCCCAGAGTTAGTTTaGCTGTTCTGCCCAGAGGTGCCATCGATGGGATGGAGACGGTGC +
Preference number: 6 (lower is better)
Translates to: NSNAKEADLLIPELV*LFCPEVPSMGWRRC
Trigger: GCACCGTCTCCATCCCATCGATGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGCGTTTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TCTCAGAAGTCATCATGGTGGGCTTTACAGCAATGGTaGGCTTTGAGTAGGCCAAGCCATTCACGCCTTCGT +
Preference number: 6 (lower is better)
Translates to: SQKSSWWALQQW*ALSRPSHSRLR
Trigger: ACGAAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp AGGTCTCAGAAGTCATCATGGTGGGCTTTACAGCAATaGTGGGCTTTGAGTAGGCCAAGCCATTCACGCCTT +
Preference number: 6 (lower is better)
Translates to: RSQKSSWWALQQ*WALSRPSHSRL
Trigger: AAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CTTCAGTCCACAAGTCGGAGGTCTCAGAAGTCATCATaGTGGGCTTTACAGCAATGGTGGGCTTTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LQSTSRRSQKSS*WALQQWWALSR
Trigger: CCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTTCTGAGACCTCCGACTTGTGGACTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp GTCTGCCAGAGCCCTCGGTGCTATGCACAGCATCTTTaGATTCTGGACAACAGTCCAGAATGGAACAGTACT +
Preference number: 6 (lower is better)
Translates to: VCQSPRCYAQHL*ILDNSPEWNST
Trigger: AGTACTGTTCCATTCTGGACTGTTGTCCAGAATCCAAAGATGCTGTGCATAGCACCGAGGGCTCTGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp AAGTCATCATGGTGGGCTTTACAGCAATGGTGGGCTTaGAGTAGGCCAAGCCATTCACGCCTTCGTCGTCTA +
Preference number: 6 (lower is better)
Translates to: KSSWWALQQWWA*SRPSHSRLRRL
Trigger: TAGACGACGAAGGCGTGAATGGCTTGGCCTACTCAAAGCCCACCATTGCTGTAAAGCCCACCATGATGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 90 bp AATCTGCCTCTGTCCTTTGGGAACTCAAACGCAAAGGAAGCCGATTaGCTCATCCCAGAGTTAGTTTTGCTGTTCTGCCCAGAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: NLPLSFGNSNAKEAD*LIPELVLLFCPEVP
Trigger: TGGCACCTCTGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGCGTTTGAGTTCCCAAAGGACAGAGGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp TTGGCTGATGATCACTTCGCAAGCAGAAGCAGTTCTTaGAAGACCCGGGTTTCCAGATGTGCTCCACAAAGT +
Preference number: 6 (lower is better)
Translates to: LADDHFASRSSS*KTRVSRCAPQS
Trigger: ACTTTGTGGAGCACATCTGGAAACCCGGGTCTTGCAAGAACTGCTTCTGCTTGCGAAGTGATCATCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS GCA 72 bp ATCATCATCAGTGCTCGCTTCATGTCGATCCAGTTGTaGAGAGTGTTACACAGTACCTCCTCTGACGTGCAC +
Preference number: 6 (lower is better)
Translates to: IIISARFMSIQL*RVLHSTSSDVH
Trigger: GTGCACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTGGATCGACATGAAGCGAGCACTGATGATGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp TTCTCTTTGGCCGTGTTTTCAGTCACATTATGTGGATaGCTCTCCCTTGAGGTTAGCCCCTGCGCAACCAAA +
Preference number: 6 (lower is better)
Translates to: FSLAVFSVTLCG*LSLEVSPCATK
Trigger: TTTGGTTGCGCAGGGGCTAACCTCAAGGGAGAGCCATCCACATAATGTGACTGAAAACACGGCCAAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp CTGTCCTTTGGGAACTCAAACGCAAAGGAAGCCGATTaGCTCATCCCAGAGTTAGTTTTGCTGTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LSFGNSNAKEAD*LIPELVLLFCP
Trigger: TGGGCAGAACAGCAAAACTAACTCTGGGATGAGCAAATCGGCTTCCTTTGCGTTTGAGTTCCCAAAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp TTCATCATCATCAGTGCTCGCTTCATGTCGATCCAGTaGTGCAGAGTGTTACACAGTACCTCCTCTGACGTG +
Preference number: 6 (lower is better)
Translates to: FIIISARFMSIQ*CRVLHSTSSDV
Trigger: CACGTCAGAGGAGGTACTGTGTAACACTCTGCACAACTGGATCGACATGAAGCGAGCACTGATGATGATGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CCA 72 bp CCAGAGTTCAAGGAACAGTTAAAAGGAGGCTCGTCATaGGCACAAACATTGGTTTCTGAATGGCTTAGGTTC +
Preference number: 6 (lower is better)
Translates to: PEFKEQLKGGSS*AQTLVSEWLRF
Trigger: GAACCTAAGCCATTCAGAAACCAATGTTTGTGCCCATGACGAGCCTCCTTTTAACTGTTCCTTGAACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS TCA 72 bp GTCACAGCAAGGTTTGTTGCACGTCAGCTTGAAGAGTaGCCAGTAATTCTCATTGAAGCGCAGTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: VTARFVARQLEE*PVILIEAQFLF
Trigger: AAAAAGGAACTGCGCTTCAATGAGAATTACTGGTCACTCTTCAAGCTGACGTGCAACAAACCTTGCTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2
CDS CAA 72 bp GAACTCTGGCTCACTTTTTCCAAGTCAGAACTGCTCTaGTTCATTTTTAACAGGTGCCTTGACTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: ELWLTFSKSELL*FIFNRCLDFGG
Trigger: ACCTCCAAAGTCAAGGCACCTGTTAAAAATGAACAAGAGCAGTTCTGACTTGGAAAAAGTGAGCCAGAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110492.2