Pregenerated sensors for PRADC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030008Ensembl transcript IDs: ENSMUST00000032080.9, ENSMUST00000113770.2, ENSMUST00000126805.8
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATCACTTCTTTAAACCACTTGAGCAGCAGCTACAAGGCTCACTGTaGGGAGGGCTTGGCTGCTGGGAGCTGAAACAGGTGGTGTGTATC | + |
|
Preference number: 1 (lower is better) Translates to: YHFFKPLEQQLQGSL*GGLGCWELKQVVCI Trigger: GATACACACCACCTGTTTCAGCTCCCAGCAGCCAAGCCCTCCTCACAGTGAGCCTTGTAGCTGCTGCTCAAGTGGTTTAAAGAAGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032080.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCGGTTTCCTCTTCCCATaGGTCACTTGTCACTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GGGVPCPLWFHLSSESISGFLFP*VTCHWN Trigger: GTTCCAGTGACAAGTGACTCATGGGAAGAGGAAACC...GGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCAAGGTTTCCTCTTCCCATaGGTCACTTGTCACTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RRGSLSSLVPLVLRIYLQGFLFP*VTCHWN Trigger: GTTCCAGTGACAAGTGACTCATGGGAAGAGGAAACC...TTGGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGCTTGGCTGCTGGGAGCTGAAACAGGTGGTGTGTATCAGGGCCATCTGCAATCATGAGATGTCCTaGAGGCCCTGGGGAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGLGCWELKQVVCIRAICNHEMS*RPWGRE Trigger: TTCCCTTCCCCAGGGCCTCAAGGACATCTCATGATT...GCAGATGGCCCTGATACACACCACCTGTTTCAGCTCCCAGCAGCCAAGCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032080.9 |
||
| 3UTR TCA 72 bp | AAGGCTCACTGTGAGGAGGGCTTGGCTGCTGGGAGCTaGAACAGGTGGTGTGTATCAGGGCCATCTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KAHCEEGLAAGS*NRWCVSGPSAF Trigger: GAAGGCAGATGGCCCTGATACACACCACCTGTTTCAGCTCCCAGCAGCCAAGCCCTCCTCACAGTGAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032080.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAAGGGCCGCGACGCACGTaGGCAGCCAGAGCACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKPGGGVPCPLWFHLSSEGPRRT*AARARD Trigger: GTCTCGTGCTCTGGCTGCCCACGTGCGTCGCGGCCC...TTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCGGGCCGCGACGCACGTaGGCAGCCAGAGCACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGGVPCPLWFHLSSESISGPRRT*AARARD Trigger: GTCTCGTGCTCTGGCTGCCCACGTGCGTCGCGGCCC...GGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAAACAGCCCGCCCACCATaGTCCTGTACCACCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKPGGGVPCPLWFHLSSETARPP*SCTTLV Trigger: GACCAGGGTGGTACAGGAGCATGGTGGGCGGGCTGT...TTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032080.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCAAACGCCCATGGTAGCCCGTaGTGTTCCAGAGAACGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGFPVLSGSTCPQNLSPNAHGSP*CSRERR Trigger: CCGCCGTTCTCTGGAACAGCACGGGCTACCATGGGC...GTTTGGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTAAAGTCCACGGAGGTTaGAGTAGCTCAAAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPGGGVPCPLWFHLSSESKVHGG*SSSKVG Trigger: CCCCACCTTTGAGCTACTGCAACCTCCGTGGACTTT...AGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTCAGGAATGTCAGCTGTaGGTTGAGTACTATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPGGGVPCPLWFHLSSESQECQL*VEYYPG Trigger: TCCAGGATAGTACTCAACGCACAGCTGACATTCCTG...AGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000126805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCCAGGAATGTCAGCTGTaGGTTGAGTACTATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KARRRGSLSSLVPLVLRIQECQL*VEYYPG Trigger: TCCAGGATAGTACTCAACGCACAGCTGACATTCCTG...GATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000126805.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCAAAAAGTCCACGGAGGTTaGAGTAGCTCAAAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGSLSSLVPLVLRIYLQKVHGG*SSSKVG Trigger: CCCCACCTTTGAGCTACTGCAACCTCCGTGGACTTT...TTGGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR GCA 90 bp | AAACTCCAAATAGCAGAATCTTGGGTTTCCTCTTCCCATGAGTCACTTGTCACTGCCCATGGTAGCCCGTaGTGTTCCAGAGAACGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQIAESWVSSSHESLVTAHGSP*CSRERR Trigger: CCGCCGTTCTCTGGAACAGCACGGGCTACCATGGGC...AGTGACAAGTGACTCATGGGAAGAGGAAACCCAAGATTCTGCTATTTGGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCTATCTCCAAACAGAGCGATCTGGTCCTaGATAAAGAAGCCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGFPVLSGSTCPQNLSPNRAIWS*IKKPLL Trigger: CAGCAACGGCTTCTTTATCCAGGACCAGATCGCTCT...GTTTGGAGATAGATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCAGAATCTTGGGTTTCCTCTTCCCATGAGTCACTTGTCACTGGAACCTGGAAAGTCCACGGAGGTTaGAGTAGCTCAAAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IAESWVSSSHESLVTGTWKVHGG*SSSKVG Trigger: CCCCACCTTTGAGCTACTGCAACCTCCGTGGACTTT...CCAGGTTCCAGTGACAAGTGACTCATGGGAAGAGGAAACCCAAGATTCTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR CCA 90 bp | CAAATAGCAGAATCTTGGGTTTCCTCTTCCCATGAGTCACTTGTCACTGGAACCAGAGCGATCTGGTCCTaGATAAAGAAGCCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIAESWVSSSHESLVTGTRAIWS*IKKPLL Trigger: CAGCAACGGCTTCTTTATCCAGGACCAGATCGCTCT...GGTTCCAGTGACAAGTGACTCATGGGAAGAGGAAACCCAAGATTCTGCTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCTTGGCTGCTGGGAGCTGAAACAGGTGGTGTGTATCAGGGCCATCTGCGGGATACTGGTGACATaGACTGGGATAGAGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GGLGCWELKQVVCIRAICGILVT*TGIEMM Trigger: CATCATCTCTATCCCAGTCAATGTCACCAGTATCCC...GCAGATGGCCCTGATACACACCACCTGTTTCAGCTCCCAGCAGCCAAGCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032080.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAGGAGGAGGGGTTCCCTGTCCTCTCTGGTTCCACTTGTCCTCAGAATCGGGATACTGGTGACATaGACTGGGATAGAGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: KARRRGSLSSLVPLVLRIGILVT*TGIEMM Trigger: CATCATCTCTATCCCAGTCAATGTCACCAGTATCCC...GATTCTGAGGACAAGTGGAACCAGAGAGGACAGGGAACCCCTCCTCCTGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||
| CDS-3UTR CAA 90 bp | CAAATAGCAGAATCTTGGGTTTCCTCTTCCCATGAGTCACTTGTCACTGGAACCGGGATACTGGTGACATaGACTGGGATAGAGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: QIAESWVSSSHESLVTGTGILVT*TGIEMM Trigger: CATCATCTCTATCCCAGTCAATGTCACCAGTATCCC...GGTTCCAGTGACAAGTGACTCATGGGAAGAGGAAACCCAAGATTCTGCTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032080.9 ENSMUST00000113770.2 ENSMUST00000126805.8 |
||