Pregenerated sensors for PQLC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045679Ensembl transcript IDs: ENSMUST00000054536.11, ENSMUST00000156360.2, ENSMUST00000222203.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAAGGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTaGCTGCAGACTTACCTGTCCCCTCCTCTCCCATCCTGGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: WKGVNWPEIVEESQT*LQTYLSPPLPSWDG Trigger: GCCATCCCAGGATGGGAGAGGAGGGGACAGGTAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCCTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR GCA 90 bp | AGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTCCAGCACTCCCAGTaGTCAAAAGGCTGCTGGAGGATCACAGGTTGGAGGATAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SCQSQEWSTLVQHSQ*SKGCWRITGWRIAW Trigger: CCAAGCTATCCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGACCACTCTTGACTTTGACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR GCA 90 bp | CAAGGGACTGGGAAGCAGAGATGTGAATCTGCTTCATGTGGTCATTaGAAAGTACCAGTCTCCAATTCTGCCAGGGCACAGGTGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: QGTGKQRCESASCGH*KVPVSNSARAQVHS Trigger: ACTGTGCACCTGTGCCCTGGCAGAATTGGAGACTGGTACTTTGCAATGACCACATGAAGCAGATTCACATCTCTGCTTCCCAGTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR GCA 90 bp | CAGCACACGCTCCAGGAAAGCATCGTGTTTTCTCAAACAGTCCAGTaGAGGCAAGGGACTGGGAAGCAGAGATGTGAATCTGCTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: QHTLQESIVFSQTVQ*RQGTGKQRCESASC Trigger: ACATGAAGCAGATTCACATCTCTGCTTCCCAGTCCCTTGCCTGCACTGGACTGTTTGAGAAAACACGATGCTTTCCTGGAGCGTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR CCA 90 bp | GTAGGAGCCAGTGAGAGAGAGACACACACCGAGCAGGTTACAACGTaGCCATGTCTGAATGGACAAGCTGCTCTTGAGTGTTTACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: VGASERETHTEQVTT*PCLNGQAALECLLV Trigger: GACAAGTAAACACTCAAGAGCAGCTTGTCCATTCAGACATGGCCACGTTGTAACCTGCTCGGTGTGTGTCTCTCTCTCACTGGCTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR TCA 90 bp | ATGACTTTAAGGGTGAAGATGGCCTCTTGGGCAGGTTCCATCATTTaGGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTCCAGCACTCCC | + |
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Preference number: 1 (lower is better) Translates to: MTLRVKMASWAGSII*VVKVKSGPLLSSTP Trigger: GGGAGTGCTGGACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR TCA 90 bp | GGAACTAGAAGGCATATTGTGCCCCTGAAGCCATGGACTCTAACCTaGAAACCCTATGCTGCAAGCCAACTCCATGGTTCTCTACAGATG | + |
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Preference number: 1 (lower is better) Translates to: GTRRHIVPLKPWTLT*KPYAASQLHGSLQM Trigger: CATCTGTAGAGAACCATGGAGTTGGCTTGCAGCATAGGGTTTTCAGGTTAGAGTCCATGGCTTCAGGGGCACAATATGCCTTCTAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR TCA 90 bp | TTCTCAAACAGTCCAGTGCAGGCAAGGGACTGGGAAGCAGAGATGTaGATCTGCTTCATGTGGTCATTGCAAAGTACCAGTCTCCAATTC | + |
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Preference number: 1 (lower is better) Translates to: FSNSPVQARDWEAEM*ICFMWSLQSTSLQF Trigger: GAATTGGAGACTGGTACTTTGCAATGACCACATGAAGCAGATTCACATCTCTGCTTCCCAGTCCCTTGCCTGCACTGGACTGTTTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR TCA 90 bp | AACTTCCAAACTAACGCCAAAAGCTTTGTGTCTTACTTCCCATCCTaGGTGCCAGTCTCCTGTGACCTCTCAGAAAAGGAAGCCTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: NFQTNAKSFVSYFPS*VPVSCDLSEKEALQ Trigger: TTGCAAGGCTTCCTTTTCTGAGAGGTCACAGGAGACTGGCACTCAGGATGGGAAGTAAGACACAAAGCTTTTGGCGTTAGTTTGGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR CCA 90 bp | TTGAAGTCCACTGTGTGTAGGAAGAAGACATCCATCATTCAGCTTTaGTGGCAGACTTCCGGTAGTGAAGTACTGTTGCTGTTACCCATA | + |
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Preference number: 1 (lower is better) Translates to: LKSTVCRKKTSIIQL*WQTSGSEVLLLLPI Trigger: TATGGGTAACAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGATGGATGTCTTCTTCCTACACACAGTGGACTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
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| 3UTR CCA 90 bp | AAGTCCACTGTGTGTAGGAAGAAGACATCCATCATTCAGCTTTGGTaGCAGACTTCCGGTAGTGAAGTACTGTTGCTGTTACCCATATAT | + |
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Preference number: 1 (lower is better) Translates to: KSTVCRKKTSIIQLW*QTSGSEVLLLLPIY Trigger: ATATATGGGTAACAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGATGGATGTCTTCTTCCTACACACAGTGGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
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| 3UTR TCA 90 bp | AATGTAGCAATGGAAAGCAATGGTGCATCATCTGGTCCAGTCGTTTaGAGTCCACTGTGTGTAGGAAGAAGACATCCATCATTCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NVAMESNGASSGPVV*SPLCVGRRHPSFSF Trigger: AAAGCTGAATGATGGATGTCTTCTTCCTACACACAGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCATTGCTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
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| 3UTR GCA 90 bp | CTGTTAGTGGCACCACTCACCATGGCCAAGTCGATGATCCATTTCTaGAGGCTAAGGTATATGTCAAGACTAGAATTTGTGATTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LLVAPLTMAKSMIHF*RLRYMSRLEFVILS Trigger: AGAAAGAATCACAAATTCTAGTCTTGACATATACCTTAGCCTGCAGAAATGGATCATCGACTTGGCCATGGTGAGTGGTGCCACTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGACTGGCTTTCCCAGGGCCCTTGACAGGCTCTGGAGGACAGTGCCTGCTCCAGGGATGGCAAGATaGCTCCATGGGAGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGTGFPRALDRLWRTVPAPGMAR*LHGRRG Trigger: TCCCCTCCTCCCATGGAGCCATCTTGCCATCCCTGG...AGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGACTGGCTTTCCCAGGGCCCTTGACAGGCTCTGGAGGACAGTGCCTGCTGCTGGGCAGGTGGCTTaGAGAAATGCTGACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GGTGFPRALDRLWRTVPAAGQVA*RNADSN Trigger: GTTGGAGTCAGCATTTCTTCAAGCCACCTGCCCAGC...AGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGACTGGCTTTCCCAGGGCCCTTGACAGGCTCTGGAGGACAGTGCCTGCTACCAGTCTCCAATTCTaGCAGGGCACAGGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: GGTGFPRALDRLWRTVPATSLQF*QGTGAQ Trigger: CTGTGCACCTGTGCCCTGGCAGAATTGGAGACTGGT...AGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCACGCGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATATTAGGCCATGGGGCAAGGAGTaGCAGAGTGTTTGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: WHAQHSRIQGSEEAEHIRPWGKE*QSVWGQ Trigger: CTGCCCCCAAACACTCTGGCACTCCTTGCCCCATGG...CCTAATATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCGCGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR CAA 90 bp | GAGTGCCAGTCTCCTGTGACCTCTCAGAAAAGGAAGCCTTGCAAATaGACTATCAACCCACCAGGCCCCAGCTCCACAGCAGCTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: ECQSPVTSQKRKPCK*TINPPGPSSTAASR Trigger: CCTAGAAGCTGCTGTGGAGCTGGGGCCTGGTGGGTTGATAGTCAATTTGCAAGGCTTCCTTTTCTGAGAGGTCACAGGAGACTGGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTGGCTGCAGACTTAGGCTTGAAGAAATGCTaGCTCCAACCAGGGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GGELARDSGRIPDLAADLGLKKC*LQPGKP Trigger: AGGCTTCCCTGGTTGGAGTCAGCATTTCTTCAAGCC...TAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTGGCTGCAGACTTAAGTGCCAGTCTCCTGTaGCCTCTCAGAAAAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GGELARDSGRIPDLAADLSASLL*PLRKGS Trigger: GCTTCCTTTTCTGAGAGGTCACAGGAGACTGGCACT...TAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | TCCACTCTTGTCCAGCACTCCCAGTGCTCAAAAGGCTGCTGGAGGATCACAGGTCCTCAGACTCCCAAGTaGTGGGATTATAGGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: STLVQHSQCSKGCWRITGPQTPK*WDYRFA Trigger: TGCAAACCTATAATCCCAGCACTTGGGAGTCTGAGG...ACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGGAATATAATCATGACTTTAAGGGTGAAGATGGCCTCTTGGGCAGGTTCCGTCCAGCACTCCCAGTaGTCAAAAGGCTGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SGNIIMTLRVKMASWAGSVQHSQ*SKGCWR Trigger: CCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGAC...GGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCATGATTATATTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACTCTTGTCCAGCACTCCCAGTGCTCAAAAGGCTGCTGGAGGATCACAGGTCAATGGTGCATCATCTaGTCCAGTCGTTTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: STLVQHSQCSKGCWRITGQWCII*SSRLKS Trigger: GGACTTCAAACGACTGGACCAGATGATGCACCATTG...ACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | CCAGTGCTCAAAAGGCTGCTGGAGGATCACAGGTTGGAGGATAGCTaGGGCTATATAGTGAGACTTTATCTTGTGGGGAAGGGAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: PVLKRLLEDHRLEDS*GYIVRLYLVGKGGT Trigger: TGTCCCTCCCTTCCCCACAAGATAAAGTCTCACTATATAGCCCAAGCTATCCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | TCTTCCCACCATGTAATCCTGGGGATTGAACTCAGGTTGTCAGGCTaGGCAGTAAGCACCTTTAACCACGGCGTCATCAGCCCAGATACA | + |
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Preference number: 2 (lower is better) Translates to: SSHHVILGIELRLSG*AVSTFNHGVISPDT Trigger: TGTATCTGGGCTGATGACGCCGTGGTTAAAGGTGCTTACTGCCAAGCCTGACAACCTGAGTTCAATCCCCAGGATTACATGGTGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTACACAACCTAGGGGACTaGGGGGAAGGAAGTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: EQFHLLLSRPHSLWEDYLHNLGD*GEGSWH Trigger: ATGCCAACTTCCTTCCCCCCAGTCCCCTAGGTTGTG...TAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | GAACCATTTTCTTCCCACCATGTAATCCTGGGGATTGAACTCAGGTaGTCAGGCTTGGCAGTAAGCACCTTTAACCACGGCGTCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: EPFSSHHVILGIELR*SGLAVSTFNHGVIS Trigger: GCTGATGACGCCGTGGTTAAAGGTGCTTACTGCCAAGCCTGACAACCTGAGTTCAATCCCCAGGATTACATGGTGGGAAGAAAATGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTTGTTACTGAGCAGAGTCCAGCACTCCCAGTaGTCAAAAGGCTGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YGRVKLPRCEQFHLLLSRVQHSQ*SKGCWR Trigger: CCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGAC...TCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCACGCGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATATTAGGCTGAAAACCCTATGCTaGAAGCCAACTCCATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: WHAQHSRIQGSEEAEHIRLKTLC*KPTPWF Trigger: GAACCATGGAGTTGGCTTGCAGCATAGGGTTTTCAG...CCTAATATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCGCGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGATGGCACGCGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATGCTTCATGTGGTCATTaGAAAGTACCAGTCTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: AGWHAQHSRIQGSEEAEHASCGH*KVPVSN Trigger: ATTGGAGACTGGTACTTTGCAATGACCACATGAAGC...ATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCGCGTGCCATCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGGAGTGAGGAGGCAGAACATATTAGGAAGGACCACAGAAAGTGATGTGAGTGACAGTGGGAGCTaGGCAGGTGGCTTGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: FRGVRRQNILGRTTESDVSDSGS*AGGLKK Trigger: TTTCTTCAAGCCACCTGCCCAGCTCCCACTGTCACT...CACATCACTTTCTGTGGTCCTTCCTAATATGTTCTGCCTCCTCACTCCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAACATATTAGGAAGGACCACAGAAAGTGATGTGTTTGGCAATCAGGCAAGAGCCCTTGACAGGCTCTaGAGGACAGTGCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QNILGRTTESDVFGNQARALDRL*RTVPAL Trigger: CAGAGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGC...TCTTGCCTGATTGCCAAACACATCACTTTCTGTGGTCCTTCCTAATATGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTAGTCTTCCTTCTCTGAGTTTGCTGTGTAGCCCAGGCTACCTCAGACTCTCCATCATTCAGCTTTaGTGGCAGACTTCCGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: SPSLPSLSLLCSPGYLRLSIIQL*WQTSGS Trigger: ACTACCGGAAGTCTGCCACCAAAGCTGAATGATGGA...GAGTCTGAGGTAGCCTGGGCTACACAGCAAACTCAGAGAAGGAAGACTAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | ATACAAGTGTCTCTTTCCATCTCTCCTAGTCTTCCTTCTCTGAGTTaGCTGTGTAGCCCAGGCTACCTCAGACTCCCAAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: IQVSLSISPSLPSLS*LCSPGYLRLPSAGI Trigger: AATCCCAGCACTTGGGAGTCTGAGGTAGCCTGGGCTACACAGCAAACTCAGAGAAGGAAGACTAGGAGAGATGGAAAGAGACACTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | CATGACTTTAAGGGTGAAGATGGCCTCTTGGGCAGGTTCCATCATTaGAGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTCCAGCACTCC | + |
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Preference number: 2 (lower is better) Translates to: HDFKGEDGLLGRFHH*SCQSQEWSTLVQHS Trigger: GGAGTGCTGGACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTGGGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTGGTCCACTCTTCTGGTCCAGTCGTTTaGAGTCCACTGTGTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PLGQVPSFELSKSRVVHSSGPVV*SPLCVG Trigger: TCCTACACACAGTGGACTTCAAACGACTGGACCAGA...AGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTGGCTGCAGACTTACAGAGAGAAGGTAGCTaGTTTTTCAGTCTGTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGELARDSGRIPDLAADLQREGS*FFSLLV Trigger: CACTAACAGACTGAAAAAGCAGCTACCTTCTCTCTG...TAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCTTGGGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTGGTCCACTTGGAGGATCACAGGTTaGAGGATAGCTTGGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: GLLGRFHHLSCQSQEWSTWRITG*RIAWAI Trigger: TATAGCCCAAGCTATCCTCCAACCTGTGATCCTCCA...AGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACTGTAAGCACCCCATTTACTTGCCAAGGTCACCTGATAATGGCATTCAGGTGCAAGCCAACTCCATaGTTCTCTACAGATGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CTVSTPFTCQGHLIMAFRCKPTP*FSTDVG Trigger: CCCCACATCTGTAGAGAACCATGGAGTTGGCTTGCA...CCTGAATGCCATTATCAGGTGACCTTGGCAAGTAAATGGGGTGCTTACAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGTAAGCACCCCATTTACTTGCCAAGGTCACCTGATAATGGCATTCAGGAACCTGAAAACCCTATaGTGCAAGCCAACTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: CTVSTPFTCQGHLIMAFRNLKTL*CKPTPW Trigger: CCATGGAGTTGGCTTGCAGCATAGGGTTTTCAGGTT...CCTGAATGCCATTATCAGGTGACCTTGGCAAGTAAATGGGGTGCTTACAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAGGCAAGGGACTGGGAAGCAGAGATGTGAATCTGCTTCATGTGGTCATTCTGAAACCCACAAGGTaGAAGGAGATAACTGACTAC | + |
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Preference number: 2 (lower is better) Translates to: SAGKGLGSRDVNLLHVVILKPTR*KEITDY Trigger: GTAGTCAGTTATCTCCTTCCACCTTGTGGGTTTCAG...AATGACCACATGAAGCAGATTCACATCTCTGCTTCCCAGTCCCTTGCCTGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCTTGGGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTGGTCCACTATCATTCAGCTTTGGTaGCAGACTTCCGGTAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: GLLGRFHHLSCQSQEWSTIIQLW*QTSGSE Trigger: TTCACTACCGGAAGTCTGCCACCAAAGCTGAATGAT...AGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTACAGATGTGGGGCAGAGAGAAGGTAGCTGCTTTTTCAGTCTGTTAGTGATTCTTTCTCCATGCTaGGGACAGAATCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: FSTDVGQREGSCFFSLLVILSPC*GQNPEP Trigger: AGGCTCTGGATTCTGTCCTCAGCATGGAGAAAGAAT...CACTAACAGACTGAAAAAGCAGCTACCTTCTCTCTGCCCCACATCTGTAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTGGCTGCAGACTTAGTTTCTATGCTTCCTTaGCTACTAAGAGAACATACA | + |
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Preference number: 2 (lower is better) Translates to: GGELARDSGRIPDLAADLVSMLP*LLREHT Trigger: TGTATGTTCTCTTAGTAGTCAAGGAAGCATAGAAAC...TAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTAATATGGAGGATCACAGGTTaGAGGATAGCTTGGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: QFHLLLSRPHSLWEDYLIWRITG*RIAWAI Trigger: TATAGCCCAAGCTATCCTCCAACCTGTGATCCTCCA...TATTAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
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| 3UTR CAA 90 bp | CTCTTCGGGGAATATAATCATGACTTTAAGGGTGAAGATGGCCTCTaGGGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFGEYNHDFKGEDGL*GRFHHLSCQSQEWS Trigger: GGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCATGATTATATTCCCCGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTTGTTACTGAGCAGACCTCAGACTCCCAAGTaGTGGGATTATAGGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YGRVKLPRCEQFHLLLSRPQTPK*WDYRFA Trigger: TGCAAACCTATAATCCCAGCACTTGGGAGTCTGAGG...TCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTTGTTACTGAGCAGACAATGGTGCATCATCTaGTCCAGTCGTTTGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: YGRVKLPRCEQFHLLLSRQWCII*SSRLKS Trigger: GGACTTCAAACGACTGGACCAGATGATGCACCATTG...TCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTAATAAGCAATGGAAAGCAATaGTGCATCATCTGGTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QFHLLLSRPHSLWEDYLISNGKQ*CIIWSS Trigger: ACTGGACCAGATGATGCACCATTGCTTTCCATTGCT...TATTAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 90 bp | AAATGTAGCAATGGAAAGCAATGGTGCATCATCTGGTCCAGTCGTTaGAAGTCCACTGTGTGTAGGAAGAAGACATCCATCATTCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KCSNGKQWCIIWSSR*KSTVCRKKTSIIQL Trigger: AAGCTGAATGATGGATGTCTTCTTCCTACACACAGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCATTGCTACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAATCATGACTTTAAGGGTGAAGATGGCCTCTTGGGCAGGTTCCATCATTTGAGCAATGGAAAGCAATaGTGCATCATCTGGTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YNHDFKGEDGLLGRFHHLSNGKQ*CIIWSS Trigger: ACTGGACCAGATGATGCACCATTGCTTTCCATTGCT...CAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCATGATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTTTAGGATATTGCTCAAAAGGCTGCTaGAGGATCACAGGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AGFIKHQRKFCRQQCLGYCSKGC*RITGWR Trigger: CCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCA...ATATCCTAAACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTTGTTACTGAGCAGAGACTACTTAATATTCTaGAAGCCACAGTGTAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: YGRVKLPRCEQFHLLLSRDYLIF*KPQCSC Trigger: ACAGCTACACTGTGGCTTTCAGAATATTAAGTAGTC...TCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR TCA 90 bp | GTATACCAGAGTAATGACATTCACTTAGAAGAAGAAACTGAGCTTTTAAAGGCTTCTGGTCCAGTCGTTTaGAGTCCACTGTGTGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VYQSNDIHLEEETELLKASGPVV*SPLCVG Trigger: TCCTACACACAGTGGACTTCAAACGACTGGACCAGA...AGCCTTTAAAAGCTCAGTTTCTTCTTCTAAGTGAATGTCATTACTCTGGTATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTAAAGGCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTACTGTGTTGGACGACTaGTTGGTATATGAACCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLKAGFIKHQRKFCRQQCTVLDD*LVYEPS Trigger: ACTGGGTTCATATACCAAGCAGTCGTCCAACACAGT...ACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGCCTTTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | TGCCAAGTGAGGTGGGACTGGCTTTCCCAGGGCCCTTaGCAGGCTCTGGAGGACAGTGCCTGCTCTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CQVRWDWLSQGP*QALEDSACSAS Trigger: GGAAGCAGAGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACCTCACTTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | GGTGGGACTGGCTTTCCCAGGGCCCTTGACAGGCTCTaGAGGACAGTGCCTGCTCTGCTTCCTGTTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GGTGFPRALDRL*RTVPALLPVET Trigger: TGTCTCAACAGGAAGCAGAGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | GACAGTGGGAGCTGGGCAGGTGGCTTGAAGAAATGCTaGCTCCAACCAGGGAAGCCTGTGGGAAAACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DSGSWAGGLKKC*LQPGKPVGKQL Trigger: GAGCTGTTTTCCCACAGGCTTCCCTGGTTGGAGTCAGCATTTCTTCAAGCCACCTGCCCAGCTCCCACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | TCCACTCTTGTCCAGCACTCCCAGTGCTCAAAAGGCTaGTGGAGGATCACAGGTTGGAGGATAGCTTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: STLVQHSQCSKG*WRITGWRIAWA Trigger: AGCCCAAGCTATCCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR GCA 72 bp | AGTCAAGAGTGGTCCACTCTTGTCCAGCACTCCCAGTaGTCAAAAGGCTGCTGGAGGATCACAGGTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQEWSTLVQHSQ*SKGCWRITGWR Trigger: CCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGACCACTCTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | CAGGCTCTGGAGGACAGTGCCTGCTCTGCTTCCTGTTaGGACAGTAGCACCTATATAGATGGCCTCCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: QALEDSACSASC*DSSTYIDGLHR Trigger: CCTATGGAGGCCATCTATATAGGTGCTACTGTCTCAACAGGAAGCAGAGCAGGCACTGTCCTCCAGAGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | GTCTATAGTGAATGTTTGAGGATGGTGCATGCCAAGTaGGGTGGGACTGGCTTTCCCAGGGCCCTTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VYSECLRMVHAK*GGTGFPRALDR Trigger: CCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACCTCACTTGGCATGCACCATCCTCAAACATTCACTATAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | TGCCAGTCTCCTGTGACCTCTCAGAAAAGGAAGCCTTaGAAATTGACTATCAACCCACCAGGCCCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CQSPVTSQKRKP*KLTINPPGPSS Trigger: GGAGCTGGGGCCTGGTGGGTTGATAGTCAATTTGCAAGGCTTCCTTTTCTGAGAGGTCACAGGAGACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGATGGCACGCGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATGTGGGAAAACAGCTCTaGAGAAATTGGGGTGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: AGWHAQHSRIQGSEEAEHVGKQL*RNWGAE Trigger: TTCAGCACCCCAATTTCTCAAGAGCTGTTTTCCCAC...ATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCGCGTGCCATCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | AATTCTGCCAGGGCACAGGTGCACAGTAATGCTTGTTaGGGAACTGAAGGCGAAGTCAGAGTGGAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSARAQVHSNAC*GTEGEVRVEER Trigger: CCTTTCCTCCACTCTGACTTCGCCTTCAGTTCCTCAACAAGCATTACTGTGCACCTGTGCCCTGGCAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | CCTGAAGCCATGGACTCTAACCTGAAAACCCTATGCTaGAAGCCAACTCCATGGTTCTCTACAGATGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PEAMDSNLKTLC*KPTPWFSTDVG Trigger: CCCCACATCTGTAGAGAACCATGGAGTTGGCTTGCAGCATAGGGTTTTCAGGTTAGAGTCCATGGCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | GCAAAGTACCAGTCTCCAATTCTGCCAGGGCACAGGTaGACAGTAATGCTTGTTGAGGAACTGAAGGCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AKYQSPILPGHR*TVMLVEELKAK Trigger: CTTCGCCTTCAGTTCCTCAACAAGCATTACTGTGCACCTGTGCCCTGGCAGAATTGGAGACTGGTACTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | AGTGAGAGAGAGACACACACCGAGCAGGTTACAACGTaGCCATGTCTGAATGGACAAGCTGCTCTTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SERETHTEQVTT*PCLNGQAALEC Trigger: ACACTCAAGAGCAGCTTGTCCATTCAGACATGGCCACGTTGTAACCTGCTCGGTGTGTGTCTCTCTCTCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTGGGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTGGTCCACTCTCTTCCTTCTCTGAGTTaGCTGTGTAGCCCAGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLGQVPSFELSKSRVVHSLPSLS*LCSPGY Trigger: GTAGCCTGGGCTACACAGCAAACTCAGAGAAGGAAG...AGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCAGGTGTGAACAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGTTCCATCATTTGAGTaGTCAAAGTCAAGAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPRCEQFHLLLSRPHSLWVPSFE*SKSRVV Trigger: GACCACTCTTGACTTTGACAACTCAAATGATGGAAC...CCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | AGGGTGAAGATGGCCTCTTGGGCAGGTTCCATCATTTaGGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RVKMASWAGSII*VVKVKSGPLLS Trigger: GGACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | AGACCCCACTCACTGTGGGAAGACTACTTAATATTCTaGAAGCCACAGTGTAGCTGTAGCTGGCTCTTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPHSLWEDYLIF*KPQCSCSWLFG Trigger: CCCGAAGAGCCAGCTACAGCTACACTGTGGCTTTCAGAATATTAAGTAGTCTTCCCACAGTGAGTGGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | TGTCCCCTCCTCTCCCATCCTGGGATGGCACTTAACTaGCCAACTTCCAAACTAACGCCAAAAGCTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CPLLSHPGMALN*PTSKLTPKALC Trigger: ACACAAAGCTTTTGGCGTTAGTTTGGAAGTTGGTCAGTTAAGTGCCATCCCAGGATGGGAGAGGAGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | GCACCTTTAACCACGGCGTCATCAGCCCAGATACAGTaGTTTCTAAGCCAGATTTTCAAGTCTTGCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: APLTTASSAQIQ*FLSQIFKSCHP Trigger: GGGATGGCAAGACTTGAAAATCTGGCTTAGAAAGCACTGTATCTGGGCTGATGACGCCGTGGTTAAAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | TCTAACCTGAAAACCCTATGCTGCAAGCCAACTCCATaGTTCTCTACAGATGTGGGGCAGAGAGAAGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNLKTLCCKPTP*FSTDVGQREGS Trigger: GCTACCTTCTCTCTGCCCCACATCTGTAGAGAACCATGGAGTTGGCTTGCAGCATAGGGTTTTCAGGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | GGCAGGTTCCATCATTTGAGTTGTCAAAGTCAAGAGTaGTCCACTCTTGTCCAGCACTCCCAGTGCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GRFHHLSCQSQE*STLVQHSQCSK Trigger: TTTTGAGCACTGGGAGTGCTGGACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CCA 72 bp | TATGCTGCAAGCCAACTCCATGGTTCTCTACAGATGTaGGGCAGAGAGAAGGTAGCTGCTTTTTCAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YAASQLHGSLQM*GREKVAAFSVC Trigger: ACAGACTGAAAAAGCAGCTACCTTCTCTCTGCCCCACATCTGTAGAGAACCATGGAGTTGGCTTGCAGCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | CTCAATTTGATGAAGAATGGCTCTCGGCTACCTCTGTaGAAGGGGGTGAATTGGCCAGAGATAGTGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LNLMKNGSRLPL*KGVNWPEIVEE Trigger: TTCTTCCACTATCTCTGGCCAATTCACCCCCTTCCACAGAGGTAGCCGAGAGCCATTCTTCATCAAATTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTATTGCCAGACCTGAACAGACAAAAGTGACAGTGGGAGCTGGGCAGGTGATGACACAGCTAACTTaGAGATCAAGGGGTAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: SAIARPEQTKVTVGAGQVMTQLT*RSRGNV Trigger: AACATTACCCCTTGATCTCAAAGTTAGCTGTGTCAT...CACCTGCCCAGCTCCCACTGTCACTTTTGTCTGTTCAGGTCTGGCAATAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACCCCATTTACTTGCCAAGGTCACCTGATAATGGCATTCAGGAAACCAGGGGGCCACAGCAAAACTaGAGGGAAATAGGAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: KHPIYLPRSPDNGIQETRGPQQN*REIGKT Trigger: TGTTTTTCCTATTTCCCTCAAGTTTTGCTGTGGCCC...CCTGGTTTCCTGAATGCCATTATCAGGTGACCTTGGCAAGTAAATGGGGTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGGAGTGAGGAGGCAGAACATATTAGGAAGGACCACAGAAAGTGATGTGGTCTATAGTGAATGTTaGAGGATGGTGCATGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FRGVRRQNILGRTTESDVVYSEC*RMVHAK Trigger: CTTGGCATGCACCATCCTCAAACATTCACTATAGAC...CACATCACTTTCTGTGGTCCTTCCTAATATGTTCTGCCTCCTCACTCCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CCA 72 bp | ACTGTGTGTAGGAAGAAGACATCCATCATTCAGCTTTaGTGGCAGACTTCCGGTAGTGAAGTACTGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVCRKKTSIIQL*WQTSGSEVLLL Trigger: CAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGATGGATGTCTTCTTCCTACACACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
||
| 3UTR TCA 72 bp | ATGACACAGCTAACTTTGAGATCAAGGGGTAATGTTTaGCTGGGCCATAAGAGAATCCTGGTAGTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MTQLTLRSRGNV*LGHKRILVVPA Trigger: TGCTGGCACTACCAGGATTCTCTTATGGCCCAGTCAAACATTACCCCTTGATCTCAAAGTTAGCTGTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | ATGGAAAGCAATGGTGCATCATCTGGTCCAGTCGTTTaGAGTCCACTGTGTGTAGGAAGAAGACATCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: MESNGASSGPVV*SPLCVGRRHPS Trigger: TGATGGATGTCTTCTTCCTACACACAGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
||
| 3UTR CCA 72 bp | GTGTGTAGGAAGAAGACATCCATCATTCAGCTTTGGTaGCAGACTTCCGGTAGTGAAGTACTGTTGCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VCRKKTSIIQLW*QTSGSEVLLLL Trigger: TAACAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGATGGATGTCTTCTTCCTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTAATAGTTCCATCATTTGAGTaGTCAAAGTCAAGAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFHLLLSRPHSLWEDYLIVPSFE*SKSRVV Trigger: GACCACTCTTGACTTTGACAACTCAAATGATGGAAC...TATTAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATATTAGGAAGGACCAGTTTCTATGCTTCCTaGACTACTAAGAGAACATAC | + |
|
Preference number: 3 (lower is better) Translates to: RSIQEFRGVRRQNILGRTSFYAS*TTKRTY Trigger: GTATGTTCTCTTAGTAGTCAAGGAAGCATAGAAACT...GGTCCTTCCTAATATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | TACAACGTGGCCATGTCTGAATGGACAAGCTGCTCTTaGGTGTTTACTTGTCATGACACAGCTAACTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YNVAMSEWTSCS*VFTCHDTANFE Trigger: CTCAAAGTTAGCTGTGTCATGACAAGTAAACACTCAAGAGCAGCTTGTCCATTCAGACATGGCCACGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTTTAGGATATCTTCCTTCTCTGAGTTaGCTGTGTAGCCCAGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: AGFIKHQRKFCRQQCLGYLPSLS*LCSPGY Trigger: GTAGCCTGGGCTACACAGCAAACTCAGAGAAGGAAG...ATATCCTAAACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTTTAGGATATGGTGAAGATGGCCTCTaGGGCAGGTTCCATCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGFIKHQRKFCRQQCLGYGEDGL*GRFHHL Trigger: CAAATGATGGAACCTGCCCAAGAGGCCATCTTCACC...ATATCCTAAACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACATATTAGGAAGGACCACAGAAAGTGATGTGTTTGGCAATCAGGCAAGACGCATCATTAGAGAATaGCACTGTAAGCACCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QNILGRTTESDVFGNQARRIIRE*HCKHPI Trigger: AATGGGGTGCTTACAGTGCAATTCTCTAATGATGCG...TCTTGCCTGATTGCCAAACACATCACTTTCTGTGGTCCTTCCTAATATGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | ATGTCAAGACTAGAATTTGTGATTCTTTCTCCATGCTaGGGACAGAATCCAGAGCCTCTGTATGCCACAACT | + |
|
Preference number: 3 (lower is better) Translates to: MSRLEFVILSPC*GQNPEPLYATT Trigger: AGTTGTGGCATACAGAGGCTCTGGATTCTGTCCTCAGCATGGAGAAAGAATCACAAATTCTAGTCTTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | TTAGTCCCTGAAACCCACAAGGTGGAAGGAGATAACTaGCTACTGCAAATGACCGTATGTGTCTCTATATCA | + |
|
Preference number: 3 (lower is better) Translates to: LVPETHKVEGDN*LLQMTVCVSIS Trigger: TGATATAGAGACACATACGGTCATTTGCAGTAGTCAGTTATCTCCTTCCACCTTGTGGGTTTCAGGGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | TCATTAGAGAATTGCACTGTAAGCACCCCATTTACTTaGCAAGGTCACCTGATAATGGCATTCAGGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLENCTVSTPFT*QGHLIMAFRKP Trigger: TGGTTTCCTGAATGCCATTATCAGGTGACCTTGGCAAGTAAATGGGGTGCTTACAGTGCAATTCTCTAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR TCA 72 bp | ATTTTCAAGTCTTGCCATCCCCAACTTGCTAAGGTTTaGAACCTCAATTTGATGAAGAATGGCTCTCGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: IFKSCHPQLAKV*NLNLMKNGSRL Trigger: TAGCCGAGAGCCATTCTTCATCAAATTGAGGTTTCAAACCTTAGCAAGTTGGGGATGGCAAGACTTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR GCA 72 bp | GTAAAAGATTTTAAATGTAGCAATGGAAAGCAATGGTaGATCATCTGGTCCAGTCGTTTGAAGTCCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VKDFKCSNGKQW*IIWSSRLKSTV Trigger: CACAGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCATTGCTACATTTAAAATCTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CCA 72 bp | CTAGTAAAAGATTTTAAATGTAGCAATGGAAAGCAATaGTGCATCATCTGGTCCAGTCGTTTGAAGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LVKDFKCSNGKQ*CIIWSSRLKST Trigger: AGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCATTGCTACATTTAAAATCTTTTACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGACTGGCTTTCCCAGGGCCCTTGACAGGCTCTGGAGGACAGTGCCTGCTAAATCTGCGGCAGCTTaGGTGCGGCGCAGACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTGFPRALDRLWRTVPAKSAAA*VRRRRP Trigger: TGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTT...AGCAGGCACTGTCCTCCAGAGCCTGTCAAGGGCCCTGGGAAAGCCAGTCCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGATGGCACGCGCAGCATTCAAGAATTCAGGGGAGTGAGGAGGCAGAACATCTGCGGCAGCTTGAGTaGGGCGCAGACGCCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGWHAQHSRIQGSEEAEHLRQLE*GADAQR Trigger: ACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAG...ATGTTCTGCCTCCTCACTCCCCTGAATTCTTGAATGCTGCGCGTGCCATCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGTGGTCCACTCTTGTCCAGCACTCCCAGTGCTCAAAAGGCTGCTGGAGAAATCTGCGGCAGCTTaGGTGCGGCGCAGACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVVHSCPALPVLKRLLEKSAAA*VRRRRP Trigger: TGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTT...CTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGACCACTCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR GCA 90 bp | CATTTGAGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTCCAGCACTCCCAGTGCCTGCGGCAGCTTGAGTaGGGCGCAGACGCCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSCQSQEWSTLVQHSQCLRQLE*GADAQR Trigger: ACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAG...GCACTGGGAGTGCTGGACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | GTGCCAGTCTCCTGTGACCTCTCAGAAAAGGAAGCCTaGCAAATTGACTATCAACCCACCAGGCCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVSCDLSEKEA*QIDYQPTRPQL Trigger: GAGCTGGGGCCTGGTGGGTTGATAGTCAATTTGCAAGGCTTCCTTTTCTGAGAGGTCACAGGAGACTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTAATAAAATCTGCGGCAGCTTaGGTGCGGCGCAGACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFHLLLSRPHSLWEDYLIKSAAA*VRRRRP Trigger: TGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTT...TATTAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | GGTCACCTGATAATGGCATTCAGGAAACCAGGCCGGTaGGAGGGGCCACAGCAAAACTTGAGGGAAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLIMAFRKPGR*EGPQQNLREIG Trigger: TCCTATTTCCCTCAAGTTTTGCTGTGGCCCCTCCAACCGGCCTGGTTTCCTGAATGCCATTATCAGGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGAATTGGCCAGAGATAGTGGAAGAATCCCAGACCTGGCTGCAGACTTAACGTTCCCATTGAAATaGAAGACGAAGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGELARDSGRIPDLAADLTFPLK*KTKSRR Trigger: CCTCCTGCTCTTCGTCTTTCATTTCAATGGGAACGT...TAAGTCTGCAGCCAGGTCTGGGATTCTTCCACTATCTCTGGCCAATTCACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR TCA 90 bp | TCCACTCTTGTCCAGCACTCCCAGTGCTCAAAAGGCTGCTGGAGGATCACAGGTGCTTCACGTTCCCATTaGAATGAAAGACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLVQHSQCSKGCWRITGASRSH*NERRRA Trigger: TGCTCTTCGTCTTTCATTTCAATGGGAACGTGAAGC...ACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAGTGCTGGACAAGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | GGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTaGTTACTGAGCAGACCCCACTCACTGTGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRVKLPRCEQFH*LLSRPHSLWED Trigger: GTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | CATGTAATCCTGGGGATTGAACTCAGGTTGTCAGGCTaGGCAGTAAGCACCTTTAACCACGGCGTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVILGIELRLSG*AVSTFNHGVIS Trigger: GCTGATGACGCCGTGGTTAAAGGTGCTTACTGCCAAGCCTGACAACCTGAGTTCAATCCCCAGGATTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CAA 72 bp | TCTTCCCACCATGTAATCCTGGGGATTGAACTCAGGTaGTCAGGCTTGGCAGTAAGCACCTTTAACCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHHVILGIELR*SGLAVSTFNHG Trigger: GCCGTGGTTAAAGGTGCTTACTGCCAAGCCTGACAACCTGAGTTCAATCCCCAGGATTACATGGTGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTAGTCTTCCTTCTCTGAGTTTGCTGTGTAGCCCAGGCTACCTCAGACTCACGTTCCCATTGAAATaGAAGACGAAGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLPSLSLLCSPGYLRLTFPLK*KTKSRR Trigger: CCTCCTGCTCTTCGTCTTTCATTTCAATGGGAACGT...GAGTCTGAGGTAGCCTGGGCTACACAGCAAACTCAGAGAAGGAAGACTAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTAAAGGCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTCTGCGGCAGCTTGAGTaGGGCGCAGACGCCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKAGFIKHQRKFCRQQCLRQLE*GADAQR Trigger: ACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAG...ACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGCCTTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | CTCCCAGTGCTCAAAAGGCTGCTGGAGGATCACAGGTaGGAGGATAGCTTGGGCTATATAGTGAGACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVLKRLLEDHR*EDSLGYIVRLY Trigger: ATAAAGTCTCACTATATAGCCCAAGCTATCCTCCAACCTGTGATCCTCCAGCAGCCTTTTGAGCACTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | AAGGGTGAAGATGGCCTCTTGGGCAGGTTCCATCATTaGAGTTGTCAAAGTCAAGAGTGGTCCACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGEDGLLGRFHH*SCQSQEWSTLV Trigger: GACAAGAGTGGACCACTCTTGACTTTGACAACTCAAATGATGGAACCTGCCCAAGAGGCCATCTTCACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTACCTCAGACTCCCAAGTGCTGGGATTATAGGTTTGCACTTCCCGTATTCGCTTCACGTTCCCATTaGAATGAAAGACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPQTPKCWDYRFALPVFASRSH*NERRRA Trigger: TGCTCTTCGTCTTTCATTTCAATGGGAACGTGAAGC...GAATACGGGAAGTGCAAACCTATAATCCCAGCACTTGGGAGTCTGAGGTAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | GGCTACCTCAGACTCCCAAGTGCTGGGATTATAGGTTaGCACTTCCCGTATTCAGCTAAGTGGCTTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYLRLPSAGIIG*HFPYSAKWLFQ Trigger: TTGAAAAAGCCACTTAGCTGAATACGGGAAGTGCAAACCTATAATCCCAGCACTTGGGAGTCTGAGGTAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | AAAAGGCTGCTGGAGGATCACAGGTTGGAGGATAGCTaGGGCTATATAGTGAGACTTTATCTTGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLLEDHRLEDS*GYIVRLYLVGK Trigger: CTTCCCCACAAGATAAAGTCTCACTATATAGCCCAAGCTATCCTCCAACCTGTGATCCTCCAGCAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | AATGGAAAGCAATGGTGCATCATCTGGTCCAGTCGTTaGAAGTCCACTGTGTGTAGGAAGAAGACATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NGKQWCIIWSSR*KSTVCRKKTSI Trigger: GATGGATGTCTTCTTCCTACACACAGTGGACTTCAAACGACTGGACCAGATGATGCACCATTGCTTTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222203.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAACATATTAGGAAGGACCACAGAAAGTGATGTGTTTGGCAATCAGGCAGCTTCACGTTCCCATTaGAATGAAAGACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQNILGRTTESDVFGNQAASRSH*NERRRA Trigger: TGCTCTTCGTCTTTCATTTCAATGGGAACGTGAAGC...TGCCTGATTGCCAAACACATCACTTTCTGTGGTCCTTCCTAATATGTTCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| 3UTR CAA 72 bp | GCTTGGTATATGAACCCAGTTCCATCTCTGCATACTTaGCTAGCCCTGCTTAGCTTGAGAGGATGTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: AWYMNPVPSLHT*LALLSLRGCYT Trigger: AGTATAACATCCTCTCAAGCTAAGCAGGGCTAGCAAAGTATGCAGAGATGGAACTGGGTTCATATACCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGTTGGCATTTTATACAAGTGTCTCTTTCCATCTCTCCTAGTCTTCTCGATGATCCATTTCTaGAGGCTGAGGATGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKEVGILYKCLFPSLLVFSMIHF*RLRMNQ Trigger: TTGGTTCATCCTCAGCCTGCAGAAATGGATCATCGA...GAAGACTAGGAGAGATGGAAAGAGACACTTGTATAAAATGCCAACTTCCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| 3UTR CAA 72 bp | GTTCCATCTCTGCATACTTTGCTAGCCCTGCTTAGCTaGAGAGGATGTTATACTGCATTATGTTTATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLHTLLALLS*RGCYTALCLWK Trigger: CTTCCATAAACATAATGCAGTATAACATCCTCTCAAGCTAAGCAGGGCTAGCAAAGTATGCAGAGATGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGTTTATGGAAGAGTTAAACTGCCCAGGTGTGAACAGTTCCACTTGTTACTCGATGATCCATTTCTaGAGGCTGAGGATGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: IMFMEELNCPGVNSSTCYSMIHF*RLRMNQ Trigger: TTGGTTCATCCTCAGCCTGCAGAAATGGATCATCGA...GTAACAAGTGGAACTGTTCACACCTGGGCAGTTTAACTCTTCCATAAACATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054536.11 ENSMUST00000222203.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTTTAGGATATCACAAATACTGGAGCTaGGCAAACTTACTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFIKHQRKFCRQQCLGYHKYWS*ANLLAA Trigger: TGCAGCCAGTAAGTTTGCCCAGCTCCAGTATTTGTG...ATATCCTAAACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| 3UTR CAA 72 bp | TCAAAACCAATTGTCCTCTCAAGTTTCTATGCTTCCTaGACTACTAAGAGAACATACAGAGAATCAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPIVLSSFYAS*TTKRTYRESNR Trigger: CCGATTTGATTCTCTGTATGTTCTCTTAGTAGTCAAGGAAGCATAGAAACTTGAGAGGACAATTGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156360.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGATTTATAAAACATCAGAGGAAGTTCTGCAGACAACAGTGTTTAGGATATTGTTATTATTCTTGTTaGACAGGTGTAGGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGFIKHQRKFCRQQCLGYCYYSC*TGVGRK Trigger: CTTTCTGCCTACACCTGTGCAACAAGAATAATAACA...ATATCCTAAACACTGTTGTCTGCAGAACTTCCTCTGATGTTTTATAAATCCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS TCA 90 bp | CCCGCGCGCTGCGCGCCGCCAGCTGCGCGTAAATCTGCGGCAGCTTaGGTGCGGCGCAGACGCCCAGCGTGCTCCAGTTGCAGAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: PARCAPPAARKSAAA*VRRRRPACSSCRTI Trigger: TATGGTTCTGCAACTGGAGCACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTTACGCGCAGCTGGCGGCGCGCAGCGCGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054536.11 ENSMUST00000156360.2 ENSMUST00000222203.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAATATAATCATGACTTTAAGGGTGAAGATGGCCTCTTGGGCAGGTTCCAAGTTGTTATTATTCTaGTTGCACAGGTGTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGNIIMTLRVKMASWAGSKLLLF*LHRCRQ Trigger: CTGCCTACACCTGTGCAACAAGAATAATAACAACTT...GGAACCTGCCCAAGAGGCCATCTTCACCCTTAAAGTCATGATTATATTCCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS-3UTR CAA 90 bp | GAACAGTTCCACTTGTTACTGAGCAGACCCCACTCACTGTGGGAAGACTACTTATTGTTATTATTCTTGTaGCACAGGTGTAGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EQFHLLLSRPHSLWEDYLLLLFL*HRCRQK Trigger: TTTCTGCCTACACCTGTGCAACAAGAATAATAACAA...TAAGTAGTCTTCCCACAGTGAGTGGGGTCTGCTCAGTAACAAGTGGAACTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS TCA 72 bp | TGCGCGCCGCCAGCTGCGCGTAAATCTGCGGCAGCTTaGGTGCGGCGCAGACGCCCAGCGTGCTCCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CAPPAARKSAAA*VRRRRPACSSC Trigger: GCAACTGGAGCACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTTACGCGCAGCTGGCGGCGCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054536.11 ENSMUST00000156360.2 ENSMUST00000222203.2 |
||
| CDS GCA 72 bp | CGCCGCCAGCTGCGCGTAAATCTGCGGCAGCTTGAGTaGGGCGCAGACGCCCAGCGTGCTCCAGTTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRQLRVNLRQLE*GADAQRAPVAE Trigger: TTCTGCAACTGGAGCACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTTACGCGCAGCTGGCGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054536.11 ENSMUST00000156360.2 ENSMUST00000222203.2 |
||
| CDS TCA 72 bp | GGCAGAAAGGCCCCAGGTCAGTGCGCTCACAGCTCCTaGATCTTGTACCTTCCACAAATACTGGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRKAPGQCAHSS*ILYLPQILELG Trigger: GCCCAGCTCCAGTATTTGTGGAAGGTACAAGATTCAGGAGCTGTGAGCGCACTGACCTGGGGCCTTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS TCA 72 bp | CGGCCATGTAGGGTAAGGCTTGCTTCACGTTCCCATTaGAATGAAAGACGAAGAGCAGGAGGACAATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPCRVRLASRSH*NERRRAGGQCL Trigger: AAGACATTGTCCTCCTGCTCTTCGTCTTTCATTTCAATGGGAACGTGAAGCAAGCCTTACCCTACATGGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054536.11 ENSMUST00000156360.2 ENSMUST00000222203.2 |
||
| CDS CCA 72 bp | TGCGATGAGAATGGGGTATTCCAGATAGGTGAGCAGTaGGTTCCCATAGTAATGCTGATAACGAAGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CDENGVFQIGEQ*VPIVMLITKED Trigger: GTCTTCCTTCGTTATCAGCATTACTATGGGAACCCACTGCTCACCTATCTGGAATACCCCATTCTCATCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054536.11 ENSMUST00000156360.2 ENSMUST00000222203.2 |
||
| CDS CCA 72 bp | GCTCCTGAATCTTGTACCTTCCACAAATACTGGAGCTaGGCAAACTTACTGGCTGCACTAATGACTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: APESCTFHKYWS*ANLLAALMTVH Trigger: ATGCACAGTCATTAGTGCAGCCAGTAAGTTTGCCCAGCTCCAGTATTTGTGGAAGGTACAAGATTCAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS CAA 90 bp | GAATTGTCAAGTCATTGGTGGTCATTAAAGTTGTTATTATTCTTGTaGCACAGGTGTAGGCAGAAAGGCCCCAGGTCAGTGCGCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ELSSHWWSLKLLLFL*HRCRQKGPRSVRSQ Trigger: CTGTGAGCGCACTGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGAATAATAACAACTTTAATGACCACCAATGACTTGACAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS GCA 72 bp | GTGCATAAGTTCATGGCCAAGTCGATGATCCATTTCTaGAGGCTGAGGATGAACCAAGAAGACACAAATACG | + |
|
Preference number: 6 (lower is better) Translates to: VHKFMAKSMIHF*RLRMNQEDTNT Trigger: CGTATTTGTGTCTTCTTGGTTCATCCTCAGCCTGCAGAAATGGATCATCGACTTGGCCATGAACTTATGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS CAA 72 bp | AGTCATTGGTGGTCATTAAAGTTGTTATTATTCTTGTaGCACAGGTGTAGGCAGAAAGGCCCCAGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHWWSLKLLLFL*HRCRQKGPRSV Trigger: CACTGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGAATAATAACAACTTTAATGACCACCAATGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||
| CDS CAA 72 bp | TCAAGTCATTGGTGGTCATTAAAGTTGTTATTATTCTaGTTGCACAGGTGTAGGCAGAAAGGCCCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSHWWSLKLLLF*LHRCRQKGPRS Trigger: TGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGAATAATAACAACTTTAATGACCACCAATGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054536.11 |
||