Pregenerated sensors for PQBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031157Ensembl transcript IDs: ENSMUST00000033497.9, ENSMUST00000115654.8, ENSMUST00000115655.8, ENSMUST00000154552.2, ENSMUST00000156741.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATAATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGACACAGAAACGCAAACTaGCAAAGCTACAGGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: IIMQHIEAMAPVPEPQGRHRNAN*QSYREQ Trigger: TTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTG...TCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| 3UTR CCA 72 bp | AACAACACTAAAGGGGCCGGGAGTGTAGCTCACTGGTaGAATAATAATGCAGCACATAGAAGCCATGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: NNTKGAGSVAHW*NNNAAHRSHGS Trigger: GGAGCCATGGCTTCTATGTGCTGCATTATTATTCCACCAGTGAGCTACACTCCCGGCCCCTTTAGTGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033497.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAGGGAGGCTTCTGCATTaGCGCGGAGCACAGCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: HGSCPRATRKKHRNANCQGRLLH*RGAQRP Trigger: CGGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCC...TTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | AATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACGGTGGCGTCGGTCTTTaGCCTCTTCCCGGTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NAAHRSHGSCPRATRKKHGGVGL*PLPGLP Trigger: AGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACC...GTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | GCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGAAGAGGGGCCCAGCTaGCGTGGTGTCAGCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: AHRSHGSCPRATRKKHRNEEGPS*RGVSTC Trigger: ACAGGTGCTGACACCACGGCAGCTGGGCCCCTCTTC...GTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | GTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGGAAGAGGGGCCCAGCTaGCGTGGTGTCAGCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPEPQGRNTETQTAKATGEEGPS*RGVSTC Trigger: ACAGGTGCTGACACCACGGCAGCTGGGCCCCTCTTC...CCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | CATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAGGTTCGGGAGGCTTCTaGATTGGCGCGGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGSCPRATRKKHRNANCQGSGGF*IGAEHS Trigger: GCTGTGCTCCGCGCCAATGCAGAAGCCTCCCGAACC...TTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACGGGGCCCAGCTGCCGTaGTGTCAGCACCTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMQHIEAMAPVPEPQGRNGAQLP*CQHLSW Trigger: CCAAGACAGGTGCTGACACCACGGCAGCTGGGCCCC...GTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR TCA 90 bp | CATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCACCGGCTCCAGATGTTTaGGGATGCCCCTCTTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRSHGSCPRATRKKHRNAPAPDV*GCPSSP Trigger: TGGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGG...TGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR TCA 90 bp | GTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGCCGGCTCCAGATGTTTaGGGATGCCCCTCTTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: VPEPQGRNTETQTAKATGPAPDV*GCPSSP Trigger: TGGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGG...CCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGCCCTCTTCCCGGTCTaGCTTGTCAAATGCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MQHIEAMAPVPEPQGRNTALFPV*LVKCPL Trigger: GAGCGGGCATTTGACAAGGCAGACCGGGAAGAGGGC...TGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | ATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACGGTGGCGTCGGTCTTTaGCCTCTTCCCGGTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IMQHIEAMAPVPEPQGRNGGVGL*PLPGLP Trigger: AGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACC...GTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | GAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGGGCCCAGCTGCCGTaGTGTCAGCACCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: EPQGRNTETQTAKATGNKGAQLP*CQHLSW Trigger: CCAAGACAGGTGCTGACACCACGGCAGCTGGGCCCC...CTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | AACAACAAGGGCTTGTTGTTTACAAACAACACTAAAGGGGCCGGGAGTGTAGCTGGGAGGCTTCTGCATTaGCGCGGAGCACAGCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: NNKGLLFTNNTKGAGSVAGRLLH*RGAQRP Trigger: CGGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCC...AGCTACACTCCCGGCCCCTTTAGTGTTGTTTGTAAACAACAAGCCCTTGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033497.9 |
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| CDS-3UTR GCA 90 bp | ATAATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGATTCGCCAAGCGGGTCTaGAGCGCAACAGGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIMQHIEAMAPVPEPQGRFAKRV*SATGSG Trigger: GCCGCTTCCTGTTGCGCTGCAGACCCGCTTGGCGAA...TCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | CAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAGTCCTGTTGACCATGTaGCCCGGGGTGCATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHIEAMAPVPEPQGRNTEVLLTM*PGVHLS Trigger: ACTCAGATGCACCCCGGGGCACATGGTCAACAGGAC...TTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | ATAATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAGGTTCGGGAGGCTTCTaGATTGGCGCGGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIMQHIEAMAPVPEPQGRGSGGF*IGAEHS Trigger: GCTGTGCTCCGCGCCAATGCAGAAGCCTCCCGAACC...TCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACATCCTCTCTGCGATGGTaGCGTCGGTCTTTGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: MQHIEAMAPVPEPQGRNTSSLRW*RRSLPS Trigger: AGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGA...TGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | AGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAATTCGCCAAGCGGGTCTaGAGCGCAACAGGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RATRKKHRNANCQSYREQFAKRV*SATGSG Trigger: GCCGCTTCCTGTTGCGCTGCAGACCCGCTTGGCGAA...TTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACTCCTCTCTGCGATGGTaGCGTCGGTCTTTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IMQHIEAMAPVPEPQGRNSSLRW*RRSLPS Trigger: AGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGA...GTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | CATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAATGGCCTCGTTCCTCTTaGGGAGTCCTGTTGACCATG | + |
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Preference number: 4 (lower is better) Translates to: HGSCPRATRKKHRNANCQWPRSS*GVLLTM Trigger: CATGGTCAACAGGACTCCCCAAGAGGAACGAGGCCA...TTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | CACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGGTGTCCTGTTGACCATGTaGCCCGGGGTGCATCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: HKEETQKRKLPKLQGTRGVLLTM*PGVHLS Trigger: ACTCAGATGCACCCCGGGGCACATGGTCAACAGGAC...ACCCCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACTGTCAGCACCTGTCTTaGCCTCGTTCCTCTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: IMQHIEAMAPVPEPQGRNCQHLS*PRSSWG Trigger: TCCCCAAGAGGAACGAGGCCAAGACAGGTGCTGACA...GTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | GCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAATAATCTCTTCCTCTaGCTCCGGCTCCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: AAHRSHGSCPRATRKKHRNNLFL*LRLQMF Trigger: AAACATCTGGAGCCGGAGCCAGAGGAAGAGATTATT...TCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | CATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCATCGCTTTCTTGTTCTTaGGGTAAGGAGCCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRSHGSCPRATRKKHRNASLSCS*GKEPVP Trigger: AGGAACTGGCTCCTTACCCCAAGAACAAGAAAGCGA...TGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | CAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAACATCTGAGTATGAGCTaGGGTCCATGGGGTCTAATT | + |
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Preference number: 4 (lower is better) Translates to: QHIEAMAPVPEPQGRNTEHLSMS*GPWGLI Trigger: AATTAGACCCCATGGACCCCAGCTCATACTCAGATG...TTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACACTGCATTATTGTTCCTaGCTTTCTTGGCGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: MQHIEAMAPVPEPQGRNTLHYCS*LSWRIW Trigger: CCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAG...TGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR TCA 90 bp | AGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACCTGCATTATTGTTCCTaGCTTTCTTGGCGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSHGSCPRATRKKHRNANLHYCS*LSWRIW Trigger: CCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAG...GTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACAATAATCTCTTCCTCTaGCTCCGGCTCCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: RSHGSCPRATRKKHRNANNNLFL*LRLQMF Trigger: AAACATCTGGAGCCGGAGCCAGAGGAAGAGATTATT...GTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CCA 90 bp | AATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACATCTGAGTATGAGCTaGGGTCCATGGGGTCTAATT | + |
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Preference number: 4 (lower is better) Translates to: NNAAHRSHGSCPRATRKKHLSMS*GPWGLI Trigger: AATTAGACCCCATGGACCCCAGCTCATACTCAGATG...TTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR TCA 90 bp | ACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGGTCCGATCTGACTTCTCATaGTTTCTGTCCACCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TRKKHRNANCQSYREQGVRSDFS*FLSTFS Trigger: TGAAAAGGTGGACAGAAATCATGAGAAGTCAGATCG...GACCCCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | AATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACTTGTCCTCAGCATCTaGATTATTGTTCCTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: NNAAHRSHGSCPRATRKKLVLSI*IIVPDF Trigger: AAAGTCAGGAACAATAATGCAGATGCTGAGGACAAG...TTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR GCA 90 bp | CACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGGTCTTGTCCTCAGCATCTaGATTATTGTTCCTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: HKEETQKRKLPKLQGTRGLVLSI*IIVPDF Trigger: AAAGTCAGGAACAATAATGCAGATGCTGAGGACAAG...ACCCCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS GCA 90 bp | TGGGGTAAGGAGCCAGTTCCTCTCTGCGATGGTGGCGTCGGTCTTTaGCCTCTTCCCGGTCTGCCTTGTCAAATGCCCGCTCTCGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: WGKEPVPLCDGGVGL*PLPGLPCQMPALVP Trigger: GGGAACGAGAGCGGGCATTTGACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS-3UTR CAA 90 bp | AATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACCGGGAGGCTTCTGCATaGGCGCGGAGCACAGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: NAAHRSHGSCPRATRKKHREASA*ARSTAP Trigger: GGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCCG...GTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS GCA 90 bp | GGCTCGTCGCTTTCTTGTTCTTGGGGTAAGGAGCCAGTTCCTCTCTaGGATGGTGGCGTCGGTCTTTGCCCTCTTCCCGGTCTGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSSLSCSWGKEPVPL*DGGVGLCPLPGLPC Trigger: ACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCAAGAACAAGAAAGCGACGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS-3UTR CAA 90 bp | CACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGGTCGGGAGGCTTCTGCATaGGCGCGGAGCACAGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: HKEETQKRKLPKLQGTRGREASA*ARSTAP Trigger: GGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCCG...ACCCCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CAA 90 bp | GCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGATCCGGCTCCAGATGTTaGAGGATGCCCCTCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: AAHRSHGSCPRATRKKHRSGSRC*RMPLFA Trigger: GGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGGA...TCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTCCGGCTCCAGATGTTaGAGGATGCCCCTCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: GSCPRATRKKHRNANCQSSGSRC*RMPLFA Trigger: GGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGGA...GCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CAA 90 bp | GCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGGTGGTGGCGTCGGTCTTaGCCCTCTTCCCGGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ATRKKHRNANCQSYREQGWWRRS*PSSRSA Trigger: GGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCA...CCCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS CCA 90 bp | GTAAGGGAGTCCGCAAGAAGGGTCAAACACCTTGTACCAGCTCGGTaGCAGACCCTCTATCCGGGTGGCCTCATAGTCAACAGGATCATC | + |
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Preference number: 5 (lower is better) Translates to: VRESARRVKHLVPAR*QTLYPGGLIVNRII Trigger: GATGATCCTGTTGACTATGAGGCCACCCGGATAGAGGGTCTGCCACCGAGCTGGTACAAGGTGTTTGACCCTTCTTGCGGACTCCCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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| CDS CCA 90 bp | TGGGGTCTAATTCTTCATCTTTGCGGCTCGTCGCTTTCTTGTTCTTaGGGTAAGGAGCCAGTTCCTCTCTGCGATGGTGGCGTCGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: WGLILHLCGSSLSCS*GKEPVPLCDGGVGL Trigger: AAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCAAGAACAAGAAAGCGACGAGCCGCAAAGATGAAGAATTAGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACATTGGCCTCGTTCCTCTaGGGGAGTCCTGTTGACCAT | + |
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Preference number: 5 (lower is better) Translates to: MQHIEAMAPVPEPQGRNTLASFL*GSPVDH Trigger: ATGGTCAACAGGACTCCCCAAGAGGAACGAGGCCAA...TGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CAA 90 bp | AATAATGCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAATTGGCCTCGTTCCTCTaGGGGAGTCCTGTTGACCAT | + |
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Preference number: 5 (lower is better) Translates to: NNAAHRSHGSCPRATRKKLASFL*GSPVDH Trigger: ATGGTCAACAGGACTCCCCAAGAGGAACGAGGCCAA...TTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS-3UTR CAA 90 bp | GCAGCACATAGAAGCCATGGCTCCTGTCCCAGAGCCACAAGGAAGAAACACAGAACTTTCTTGGCGGATTaGGTAACGACAAAGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: AAHRSHGSCPRATRKKHRTFLAD*VTTKLG Trigger: TCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGT...TCTGTGTTTCTTCCTTGTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS TCA 90 bp | GACTTTCTTGGCGGATTTGGTAACGACAAAGTTAGGATCATGTGGTaGGAGCCACGACACAAGGTCTGTCTCCACATTCCAATAGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: DFLGGFGNDKVRIMW*EPRHKVCLHIPIVR Trigger: CCTTACTATTGGAATGTGGAGACAGACCTTGTGTCGTGGCTCTCACCACATGATCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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| CDS GCA 90 bp | TCTGTCCACCTTTTCAAGATTCCGGTCCGACTTGTCCTCAGCATCTaGATTATTGTTCCTGACTTTCTTGGCGGATTTGGTAACGACAAA | + |
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Preference number: 5 (lower is better) Translates to: SVHLFKIPVRLVLSI*IIVPDFLGGFGNDK Trigger: TTTGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAAGTCGGACCGGAATCTTGAAAAGGTGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS-3UTR CAA 90 bp | AGCCACAAGGAAGAAACACAGAAACGCAAACTGCCAAAGCTACAGGGAACAAGGACTTTCTTGGCGGATTaGGTAACGACAAAGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SHKEETQKRKLPKLQGTRTFLAD*VTTKLG Trigger: TCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGT...CCTTGTTCCCTGTAGCTTTGGCAGTTTGCGTTTCTGTGTTTCTTCCTTGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033497.9 ENSMUST00000115655.8 |
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| CDS CAA 72 bp | GGAGCCAGTTCCTCTCTGCGATGGTGGCGTCGGTCTTaGCCCTCTTCCCGGTCTGCCTTGTCAAATGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GASSSLRWWRRS*PSSRSALSNAR Trigger: GCGGGCATTTGACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS GCA 72 bp | GAGCCAGTTCCTCTCTGCGATGGTGGCGTCGGTCTTTaGCCTCTTCCCGGTCTGCCTTGTCAAATGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: EPVPLCDGGVGL*PLPGLPCQMPA Trigger: AGCGGGCATTTGACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CAA 72 bp | TGGTGGCGTCGGTCTTTGCCCTCTTCCCGGTCTGCCTaGTCAAATGCCCGCTCTCGTTCCCTGTCCCGATCT | + |
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Preference number: 6 (lower is better) Translates to: WWRRSLPSSRSA*SNARSRSLSRS Trigger: AGATCGGGACAGGGAACGAGAGCGGGCATTTGACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CAA 72 bp | GCAATAATCTCTTCCTCTGGCTCCGGCTCCAGATGTTaGAGGATGCCCCTCTTCGCCAAGCGGGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AIISSSGSGSRC*RMPLFAKRVCS Trigger: GCTGCAGACCCGCTTGGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGGAGCCAGAGGAAGAGATTATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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| CDS GCA 72 bp | CTTTCTTGTTCTTGGGGTAAGGAGCCAGTTCCTCTCTaGGATGGTGGCGTCGGTCTTTGCCCTCTTCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LSCSWGKEPVPL*DGGVGLCPLPG Trigger: ACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCAAGAACAAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CCA 72 bp | TCCGCAAGAAGGGTCAAACACCTTGTACCAGCTCGGTaGCAGACCCTCTATCCGGGTGGCCTCATAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SARRVKHLVPAR*QTLYPGGLIVN Trigger: GTTGACTATGAGGCCACCCGGATAGAGGGTCTGCCACCGAGCTGGTACAAGGTGTTTGACCCTTCTTGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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| CDS GCA 72 bp | CTCTCGTTCTCTGTCATTCTTCTCGTGGTTTCGGTCTaGCTTCTCGTGGCTCCTGTCTGGCTTCTCATGACT | + |
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Preference number: 6 (lower is better) Translates to: LSFSVILLVVSV*LLVAPVWLLMT Trigger: AGTCATGAGAAGCCAGACAGGAGCCACGAGAAGGCAGACCGAAACCACGAGAAGAATGACAGAGAACGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CCA 72 bp | ATTCTTCATCTTTGCGGCTCGTCGCTTTCTTGTTCTTaGGGTAAGGAGCCAGTTCCTCTCTGCGATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ILHLCGSSLSCS*GKEPVPLCDGG Trigger: GCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCAAGAACAAGAAAGCGACGAGCCGCAAAGATGAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS TCA 72 bp | GGCGGATTTGGTAACGACAAAGTTAGGATCATGTGGTaGGAGCCACGACACAAGGTCTGTCTCCACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGFGNDKVRIMW*EPRHKVCLHIP Trigger: TGGAATGTGGAGACAGACCTTGTGTCGTGGCTCTCACCACATGATCCTAACTTTGTCGTTACCAAATCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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| CDS CAA 72 bp | AGATTCCGGTCCGACTTGTCCTCAGCATCTGCATTATaGTTCCTGACTTTCTTGGCGGATTTGGTAACGACA | + |
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Preference number: 6 (lower is better) Translates to: RFRSDLSSASAL*FLTFLADLVTT Trigger: TGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAAGTCGGACCGGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CAA 90 bp | TTGTCCTCAGCATCTGCATTATTGTTCCTGACTTTCTTGGCGGATTaGGTAACGACAAAGTTAGGATCATGTGGTGAGAGCCACGACACA | + |
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Preference number: 6 (lower is better) Translates to: LSSASALLFLTFLAD*VTTKLGSCGESHDT Trigger: TGTGTCGTGGCTCTCACCACATGATCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS GCA 72 bp | CTTTTCAAGATTCCGGTCCGACTTGTCCTCAGCATCTaGATTATTGTTCCTGACTTTCTTGGCGGATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LFKIPVRLVLSI*IIVPDFLGGFG Trigger: ACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAAGTCGGACCGGAATCTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CAA 90 bp | ACCTTTTCAAGATTCCGGTCCGACTTGTCCTCAGCATCTGCATTATaGTTCCTGACTTTCTTGGCGGATTTGGTAACGACAAAGTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: TFSRFRSDLSSASAL*FLTFLADLVTTKLG Trigger: TCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAAGTCGGACCGGAATCTTGAAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000156741.8 |
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| CDS CAA 72 bp | GCATCTGCATTATTGTTCCTGACTTTCTTGGCGGATTaGGTAACGACAAAGTTAGGATCATGTGGTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASALLFLTFLAD*VTTKLGSCGES Trigger: GCTCTCACCACATGATCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033497.9 ENSMUST00000115654.8 ENSMUST00000115655.8 ENSMUST00000154552.2 ENSMUST00000156741.8 |
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