Pregenerated sensors for PPWD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021713Ensembl transcript IDs: ENSMUST00000022226.6
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATTCGCTCCCCGCCACTaGCAGGGCCGGTTCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAFAPRH*QGRFSL Trigger: GAGCGAGAACCGGCCCTGGCAGTGGCGGGGAGCGAA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATTCGGCCCTTCAGCTTaGGTAGCTGCCATGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAFGPSA*VAAMTS Trigger: AGAAGTCATGGCAGCTACTCAAGCTGAAGGGCCGAA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTGGGAACTTATATTCGTaGGGCGGTCCAGTCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFGNLYS*GGPVQY Trigger: GTACTGGACTGGACCGCCGCACGAATATAAGTTCCC...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACTCAGAAGCAGCAACTaGAGATATGGCATCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKALRSSN*RYGISW Trigger: CCAGGAGATGCCATATCTTCAGTTGCTGCTTCTGAG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGGATCCGTTGGTATTTaGTCCAGCATTGGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAGSVGI*SSIGHA Trigger: AGCATGGCCAATGCTGGATCAAATACCAACGGATCC...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGCGCTCATACATGGATaGACTGGGGAGATTATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAALIHG*TGEIIK Trigger: CTTGATAATCTCCCCAGTGCATCCATGTATGAGCGC...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCTCTGTGCATGTAACTaGGCTCATACATGGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFLCACN*AHTWMH Trigger: GTGCATCCATGTATGAGCGCAGTTACATGCACAGAG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACATCTCTATGGTAGCTaGAGCTCGATGCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAHLYGS*SSMLFG Trigger: GCCAAAAAGCATCGAGCTGCAGCTACCATAGAGATG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCGAGCTTCAGCATGTTaGTCATGTCAAAGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFRASAC*SCQSSP Trigger: TGGTGAACTTTGACATGATCAACATGCTGAAGCTCG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCTTCCAAACACCGTGTaGTTATTATCAAGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFLPNTV*LLSSQG Trigger: GCCTTGGCTTGATAATAAGCACACGGTGTTTGGAAG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTAACTGCGCTCATACATaGATGCACTGGGGAGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFNCAHT*MHWGDY Trigger: ATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTT...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATCTCCCATGCTTGTGTaGACAATGGCACTATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKASPMLV*TMALSE Trigger: TTCAGATAGTGCCATTGTCCACACAAGCATGGGAGA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTTTTCTTCCCATCAGGTaGAAAACATATGCTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFFLPIR*KTYAGW Trigger: CCAACCAGCATATGTTTTTCACCTGATGGGAAGAAA...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKASLRAN*NTLNNS Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCATACATGGATGCACTaGGGAGATTATCAAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFHTWMH*GDYQGR Trigger: TCTACCTTGATAATCTCCCCAGTGCATCCATGTATG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTAGATATGGCATCTCCTaGGCAATATATCCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFRYGIS*AIYPLT Trigger: TGTGAGTGGATATATTGCCCAGGAGATGCCATATCT...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCAGCAACTGAAGATATaGCATCTCCTGGGCAATATA | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFQQLKI*HLLGNI Trigger: TATATTGCCCAGGAGATGCCATATCTTCAGTTGCTG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTGTCAAAAATATGAAGTaGCTGGTTATCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFVKNMK*LVISSS Trigger: GGACGAGGAGATAACCAGCCACTTCATATTTTTGAC...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACAGCTCGATGCTTTTTaGCTATTCCCTGAAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAQLDAF*LFPETK Trigger: CTTTGTTTCAGGGAATAGCCAAAAAGCATCGAGCTG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCATACCAGTACCTGTTaGATCTCCTGTCTGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFHTSTC*ISCLNH Trigger: ATGATTCAGACAGGAGATCCAACAGGTACTGGTATG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR TCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCATCAAAGACCCTCATaGGTTTTCCAGTTAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFHQRPS*VFQLKT Trigger: GGTTTTTAACTGGAAAACTCATGAGGGTCTTTGATG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATATGCTGGTTGGATATaGCTTACACTTGGCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAYAGWI*LTLGKF Trigger: GAATTTGCCAAGTGTAAGGCATATCCAACCAGCATA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACAGGTGAAAAACATATaGTGGTTGGATATGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAQVKNI*WLDMPY Trigger: GTAAGGCATATCCAACCAGCATATGTTTTTCACCTG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTTGTTGCCTCATCTGCTaGAGTTCAGTAAACATACTT | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFCCLIC*SSVNIL Trigger: AAGTATGTTTACTGAACTGCAGCAGATGAGGCAACA...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTAGTTGTTGCCTCATCTaGTGCAGTTCAGTAAACATA | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFSCCLI*CSSVNI Trigger: TATGTTTACTGAACTGCAGCAGATGAGGCAACAACT...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAACTCTAATGTTTTCTTaGTTGCCTAAGATCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKATLMFS*LPKIRT Trigger: TGTGCGGATCTTAGGCAAGCAAGAAAACATTAGAGT...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTATCTCTGTCAGAATCTaGAGTTTTTGTATCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFISVRI*SFCIFR Trigger: CCGGAAGATACAAAAACTGCAGATTCTGACAGAGAT...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAAAAACATATGCTGGTTaGATATGCCTTACACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKAKTYAG*ICLTLG Trigger: GCCAAGTGTAAGGCATATCCAACCAGCATATGTTTT...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTTGTCGTAATGTTGAGTaGAATTCGTCCTCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFCRNVE*NSSSNS Trigger: AGAGTTTGAGGACGAATTCCACTCAACATTACGACA...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATGTACAGACTATTGTTaGGTCAGCTTGAATATTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVHFNLLPLRITNSPEKACTDYC*VSLNIL Trigger: CAGAATATTCAAGCTGACCCAACAATAGTCTGTACA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTGATATGCCTTACACTTaGCAAATTCATATAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HFNLLPLRITNSPEKAVFDMPYT*QIHISL Trigger: CAGACTTATATGAATTTGCCAAGTGTAAGGCATATC...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 90 bp | TTTGATGTGAATGTCTCCCATGCTTGTGTGGACAATGGCACTATCTaGAACTCGCTTCGGCCCTTCAGCTTGAGTAGCTGCCATGACTTC | + |
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Preference number: 5 (lower is better) Translates to: FDVNVSHACVDNGTI*NSLRPFSLSSCHDF Trigger: GAAGTCATGGCAGCTACTCAAGCTGAAGGGCCGAAGCGAGTTTCAGATAGTGCCATTGTCCACACAAGCATGGGAGACATTCACATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 90 bp | GTGTGGACAATGGCACTATCTGAAACTCGCTTCGGCCCTTCAGCTTaGGTAGCTGCCATGACTTCTTCTTTAGAAGGTTTCTCATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: VWTMALSETRFGPSA*VAAMTSSLEGFSLK Trigger: TTTTAATGAGAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGGCCGAAGCGAGTTTCAGATAGTGCCATTGTCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 90 bp | ATGTGTGATAACATCTCTGTGCATGTAACTGCGCTCATACATGGATaGACTGGGGAGATTATCAAGGTAGACTCTTTCGAACTCCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: MCDNISVHVTALIHG*TGEIIKVDSFELQN Trigger: GTTCTGGAGTTCGAAAGAGTCTACCTTGATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTTACATGCACAGAGATGTTATCACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 90 bp | TCTGTCTTATACTCCCAGTTCACATTTTTAGGGAACTTATATTCGTaGGGCGGTCCAGTCCAGTACTCAATCATCCCGGATTTGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SVLYSQFTFLGNLYS*GGPVQYSIIPDLSE Trigger: TTCTGACAAATCCGGGATGATTGAGTACTGGACTGGACCGCCGCACGAATATAAGTTCCCTAAAAATGTGAACTGGGAGTATAAGACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACTTCGGCCCTTCAGCTaGAGTAGCTGCCATGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKALRPFS*SSCHDF Trigger: GAAGTCATGGCAGCTACTCAAGCTGAAGGGCCGAAG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 90 bp | CGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAGTTGTTaGCTCATCTGCTGCAGTTCAGTAAACATACTTAATGATTCATCA | + |
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Preference number: 5 (lower is better) Translates to: RSTAIRRPNSMSGSC*LICCSSVNILNDSS Trigger: TGATGAATCATTAAGTATGTTTACTGAACTGCAGCAGATGAGGCAACAACTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 90 bp | AAGTTTTCCACAGTCTTGGGACACTCAACAGGAAAAAGTTTGATGTaGATGTCTCCCATGCTTGTGTGGACAATGGCACTATCTGAAACT | + |
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Preference number: 5 (lower is better) Translates to: KFSTVLGHSTGKSLM*MSPMLVWTMALSET Trigger: AGTTTCAGATAGTGCCATTGTCCACACAAGCATGGGAGACATTCACATCAAACTTTTTCCTGTTGAGTGTCCCAAGACTGTGGAAAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACCGAGCTTCAGCATGTaGATCATGTCAAAGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAPSFSM*IMSKFT Trigger: GGTGAACTTTGACATGATCAACATGCTGAAGCTCGG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATCAATCATCCCGGATTaGTCAGAAGACACCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKASIIPD*SEDTTA Trigger: AGCAGTGGTGTCTTCTGACAAATCCGGGATGATTGA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGAATGTCTCCCATGCTaGTGTGGACAATGGCACTAT | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAECLPC*CGQWHY Trigger: ATAGTGCCATTGTCCACACAAGCATGGGAGACATTC...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCACCATACCAGTACCTGTaGGATCTCCTGTCTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAPYQYL*DLLSES Trigger: TGATTCAGACAGGAGATCCAACAGGTACTGGTATGG...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTATTTGATCCAGCATaGGCCATGCTGAGTGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAVFDPA*AMLSVY Trigger: GTACACACTCAGCATGGCCAATGCTGGATCAAATAC...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 90 bp | ATCATAAATGAAAATTTTTCCTGTACTCTTCTCAGAAGCAGCAACTaGAGATATGGCATCTCCTGGGCAATATATCCACTCACACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: IINENFSCTLLRSSN*RYGISWAIYPLTLS Trigger: GGACAGTGTGAGTGGATATATTGCCCAGGAGATGCCATATCTTCAGTTGCTGCTTCTGAGAAGAGTACAGGAAAAATTTTCATTTATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 90 bp | TCCCATCAGGTGAAAAACATATGCTGGTTGGATATGCCTTACACTTaGCAAATTCATATAAGTCTGTGTCTGTCTTATACTCCCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SHQVKNICWLDMPYT*QIHISLCLSYTPSS Trigger: TGAACTGGGAGTATAAGACAGACACAGACTTATATGAATTTGCCAAGTGTAAGGCATATCCAACCAGCATATGTTTTTCACCTGATGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCTAATGTTTTCTTGCTaGCCTAAGATCCGCACACAC | + |
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Preference number: 5 (lower is better) Translates to: HFNLLPLRITNSPEKAVFLMFSC*PKIRTH Trigger: GTGTGTGCGGATCTTAGGCAAGCAAGAAAACATTAG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTCAGAATCTGCAGTTTTaGTATCTTCCGGCTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: HFNLLPLRITNSPEKAVFQNLQF*YLPALV Trigger: AACGAGAGCCGGAAGATACAAAAACTGCAGATTCTG...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAAAGTTTTCCACAGTCTaGGGACACTCAACAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAKFSTV*GHSTGK Trigger: TTTTCCTGTTGAGTGTCCCAAGACTGTGGAAAACTT...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTTGTCATGTCGTAATGTaGAGTGGAATTCGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: HFNLLPLRITNSPEKAVFCHVVM*SGIRPQ Trigger: TTGAGGACGAATTCCACTCAACATTACGACATGACA...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAAAAAACATATGCTGGTaGGATATGCCTTACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAKNICW*DMPYTW Trigger: CCAAGTGTAAGGCATATCCAACCAGCATATGTTTTT...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 90 bp | TGTCAAAAATATGAAGTGGCTGGTTATCTCCTCGTCCATCATAAATaGAAATTTTTCCTGTACTCTTCTCAGAAGCAGCAACTGAAGATA | + |
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Preference number: 5 (lower is better) Translates to: CQKYEVAGYLLVHHK*KFFLYSSQKQQLKI Trigger: TATCTTCAGTTGCTGCTTCTGAGAAGAGTACAGGAAAAATTTTCATTTATGATGGACGAGGAGATAACCAGCCACTTCATATTTTTGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTGGATATGCCTTACACTaGGCAAATTCATATAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: HFNLLPLRITNSPEKAVFGYALH*ANSYKS Trigger: AGACTTATATGAATTTGCCAAGTGTAAGGCATATCC...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAGTGTTTATGTACAGACTATTGTaGGGTCAGCTTGAATATTCT | + |
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Preference number: 5 (lower is better) Translates to: HFNLLPLRITNSPEKAVFMYRLL*GQLEYS Trigger: AGAATATTCAAGCTGACCCAACAATAGTCTGTACAT...AAACACTGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCAAAGATGTACAGACTATaGTTGGGTCAGCTTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKAKMYRL*LGQLEY Trigger: ATATTCAAGCTGACCCAACAATAGTCTGTACATCTT...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGCATTTCAATTTGTTACCCCTGAGAATCACAAATAGTCCAGAAAAGGCATTATCGGTTTTGGGGTaGACTTTAACGTTAGAAATC | + |
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Preference number: 5 (lower is better) Translates to: LVHFNLLPLRITNSPEKALSVLG*TLTLEI Trigger: GATTTCTAACGTTAAAGTCAACCCCAAAACCGATAA...TGCCTTTTCTGGACTATTTGTGATTCTCAGGGGTAACAAATTGAAATGCACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 72 bp | GGTAGACTCTTTCGAACTCCAGAACTTTCCTCTTCTTaGCAAGGGTTGCCTCCACCGGTAAAGGCCCGACCC | + |
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Preference number: 6 (lower is better) Translates to: GRLFRTPELSSS*QGLPPPVKARP Trigger: GGGTCGGGCCTTTACCGGTGGAGGCAACCCTTGCCAAGAAGAGGAAAGTTCTGGAGTTCGAAAGAGTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CAA 72 bp | TTTCGAACTCCAGAACTTTCCTCTTCTTGGCAAGGGTaGCCTCCACCGGTAAAGGCCCGACCCAGCGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FRTPELSSSWQG*PPPVKARPSAL Trigger: AAGAGCGCTGGGTCGGGCCTTTACCGGTGGAGGCAACCCTTGCCAAGAAGAGGAAAGTTCTGGAGTTCGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CAA 90 bp | GGTAGACTCTTTCGAACTCCAGAACTTTCCTCTTCTTGGCAAGGGTaGCCTCCACCGGTAAAGGCCCGACCCAGCGCTCTTCATTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GRLFRTPELSSSWQG*PPPVKARPSALHSH Trigger: ATGAGAATGAAGAGCGCTGGGTCGGGCCTTTACCGGTGGAGGCAACCCTTGCCAAGAAGAGGAAAGTTCTGGAGTTCGAAAGAGTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 72 bp | AATGTCTCCCATGCTTGTGTGGACAATGGCACTATCTaGAACTCGCTTCGGCCCTTCAGCTTGAGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NVSHACVDNGTI*NSLRPFSLSSC Trigger: GCAGCTACTCAAGCTGAAGGGCCGAAGCGAGTTTCAGATAGTGCCATTGTCCACACAAGCATGGGAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 72 bp | ATGGCACTATCTGAAACTCGCTTCGGCCCTTCAGCTTaGGTAGCTGCCATGACTTCTTCTTTAGAAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MALSETRFGPSA*VAAMTSSLEGF Trigger: GAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGGCCGAAGCGAGTTTCAGATAGTGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 72 bp | TACTCCCAGTTCACATTTTTAGGGAACTTATATTCGTaGGGCGGTCCAGTCCAGTACTCAATCATCCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: YSQFTFLGNLYS*GGPVQYSIIPD Trigger: ATCCGGGATGATTGAGTACTGGACTGGACCGCCGCACGAATATAAGTTCCCTAAAAATGTGAACTGGGAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 72 bp | CTCTGTGCATGTAACTGCGCTCATACATGGATGCACTaGGGAGATTATCAAGGTAGACTCTTTCGAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCACNCAHTWMH*GDYQGRLFRTP Trigger: TGGAGTTCGAAAGAGTCTACCTTGATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTTACATGCACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 72 bp | CTGAGTGTGTACGGTCTGTCATGTCGTAATGTTGAGTaGAATTCGTCCTCAAACTCTCCTCCCCATATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSVYGLSCRNVE*NSSSNSPPHML Trigger: AAGCATATGGGGAGGAGAGTTTGAGGACGAATTCCACTCAACATTACGACATGACAGACCGTACACACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 72 bp | ACCTCCATGCCTTTAGTCACTCTTCCAAACACCGTGTaGTTATTATCAAGCCAAGGCGTTGGTACTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: TSMPLVTLPNTV*LLSSQGVGTTV Trigger: AACAGTAGTACCAACGCCTTGGCTTGATAATAAGCACACGGTGTTTGGAAGAGTGACTAAAGGCATGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 72 bp | TTCCTGTACTCTTCTCAGAAGCAGCAACTGAAGATATaGCATCTCCTGGGCAATATATCCACTCACACTGTC | + |
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Preference number: 6 (lower is better) Translates to: FLYSSQKQQLKI*HLLGNISTHTV Trigger: GACAGTGTGAGTGGATATATTGCCCAGGAGATGCCATATCTTCAGTTGCTGCTTCTGAGAAGAGTACAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 72 bp | AACATCTCTGTGCATGTAACTGCGCTCATACATGGATaGACTGGGGAGATTATCAAGGTAGACTCTTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: NISVHVTALIHG*TGEIIKVDSFE Trigger: TTCGAAAGAGTCTACCTTGATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTTACATGCACAGAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 72 bp | GCCATTCGTCGGCCAAATTCCATGTCTGGTAGTTGTTaGCTCATCTGCTGCAGTTCAGTAAACATACTTAAT | + |
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Preference number: 6 (lower is better) Translates to: AIRRPNSMSGSC*LICCSSVNILN Trigger: ATTAAGTATGTTTACTGAACTGCAGCAGATGAGGCAACAACTACCAGACATGGAATTTGGCCGACGAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CAA 72 bp | AACAAAGCTAGCTGCATCACTCTAATGTTTTCTTGCTaGCCTAAGATCCGCACACACCGATTCGTTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: NKASCITLMFSC*PKIRTHRFVST Trigger: TGTAGAAACGAATCGGTGTGTGCGGATCTTAGGCAAGCAAGAAAACATTAGAGTGATGCAGCTAGCTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS TCA 72 bp | GAAAATTTTTCCTGTACTCTTCTCAGAAGCAGCAACTaGAGATATGGCATCTCCTGGGCAATATATCCACTC | + |
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Preference number: 6 (lower is better) Translates to: ENFSCTLLRSSN*RYGISWAIYPL Trigger: GAGTGGATATATTGCCCAGGAGATGCCATATCTTCAGTTGCTGCTTCTGAGAAGAGTACAGGAAAAATTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS GCA 72 bp | CCAAATTCCATGTCTGGTAGTTGTTGCCTCATCTGCTaGAGTTCAGTAAACATACTTAATGATTCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PNSMSGSCCLIC*SSVNILNDSSK Trigger: CTTTGATGAATCATTAAGTATGTTTACTGAACTGCAGCAGATGAGGCAACAACTACCAGACATGGAATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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| CDS CCA 72 bp | GTGAAAAACATATGCTGGTTGGATATGCCTTACACTTaGCAAATTCATATAAGTCTGTGTCTGTCTTATACT | + |
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Preference number: 6 (lower is better) Translates to: VKNICWLDMPYT*QIHISLCLSYT Trigger: AGTATAAGACAGACACAGACTTATATGAATTTGCCAAGTGTAAGGCATATCCAACCAGCATATGTTTTTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022226.6 |
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