Pregenerated sensors for PPTC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038582Ensembl transcript IDs: ENSMUST00000053426.15, ENSMUST00000119015.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAAGGCAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTaGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: TKAAAAAAVEGTLLP*SLYPVSPDPAQPRH Trigger: GTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCCTTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR TCA 90 bp | GTCTCCTTCCCCTGTCCCTCTCCTGTGGGCCAGGCCTCTAGCCTGTaGCCTGGACAAATCAACAGACTGCCACAGCTGCAGTCACAGGGG | + |
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Preference number: 1 (lower is better) Translates to: VSFPCPSPVGQASSL*PGQINRLPQLQSQG Trigger: CCCCTGTGACTGCAGCTGTGGCAGTCTGTTGATTTGTCCAGGTCACAGGCTAGAGGCCTGGCCCACAGGAGAGGGACAGGGGAAGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CCA 90 bp | TGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGCGGCAGCGGTaGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGTCTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: CWLLYPEQRQRQRQR*RALSCLGAYTQSLQ Trigger: CTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR GCA 90 bp | TTCAGCCAATCTCGCCAATCCCGCCAGCCGCCTCCAAACCACTCCTaGCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FSQSRQSRQPPPNHS*PVSICWLLYPEQRQ Trigger: CTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTGGCGGGATTGGCGAGATTGGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR CCA 90 bp | ATCAGTGGCAAAGAAATGTGGTCCTGCCAGCAGGATCAGCACATGTaGCAGGGAGAAGTCGGGAGACAGGGGAAAGGCAGGAGTCACCAG | + |
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Preference number: 1 (lower is better) Translates to: ISGKEMWSCQQDQHM*QGEVGRQGKGRSHQ Trigger: CTGGTGACTCCTGCCTTTCCCCTGTCTCCCGACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CCA 90 bp | AAAACCTCCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTaGGTCACCAGTGGGTACGGGCTAGCGGGTGACAGCAGTGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: KTSRRRERSPRFFSQ*VTSGYGLAGDSSGS Trigger: AGAACCACTGCTGTCACCCGCTAGCCCGTACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGGAGGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR TCA 90 bp | GGGTACGGGCTAGCGGGTGACAGCAGTGGTTCTCAACAAGGATCTTaGTGGGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: GYGLAGDSSGSQQGS*WVSNMGQSIHHWPL Trigger: CAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACCCATCAAGATCCTTGTTGAGAACCACTGCTGTCACCCGCTAGCCCGTACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CCA 90 bp | CCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAAGAAATGTaGTCCTGCCAGCAGGATCAGCACATGTGGCAGGGAGAAGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: PEHPSLATEISGKEM*SCQQDQHMWQGEVG Trigger: CCCGACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR GCA 90 bp | CATCCATCATTGGCCACTGAGATCAGTGGCAAAGAAATGTGGTCCTaGCAGCAGGATCAGCACATGTGGCAGGGAGAAGTCGGGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: HPSLATEISGKEMWS*QQDQHMWQGEVGRQ Trigger: CTGTCTCCCGACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CCA 90 bp | TTACTAGATTTTGGTAAGGAGTCTCCTTCCCCTGTCCCTCTCCTGTaGGCCAGGCCTCTAGCCTGTGACCTGGACAAATCAACAGACTGC | + |
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Preference number: 1 (lower is better) Translates to: LLDFGKESPSPVPLL*ARPLACDLDKSTDC Trigger: GCAGTCTGTTGATTTGTCCAGGTCACAGGCTAGAGGCCTGGCCCACAGGAGAGGGACAGGGGAAGGAGACTCCTTACCAAAATCTAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR TCA 90 bp | CTTGATGGGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTaGGATCAGTGGCAAAGAAATGTGGTCCTGCCAGCAGGATCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LDGSQTWARASIIGH*DQWQRNVVLPAGSA Trigger: TGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACCCATCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR TCA 90 bp | TCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTACGGGCTAGCGGGTaGCAGCAGTGGTTCTCAACAAGGATCTTGATGGGTCTCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: SLFLSVGHQWVRASG*QQWFSTRILMGLKH Trigger: ATGTTTGAGACCCATCAAGATCCTTGTTGAGAACCACTGCTGTCACCCGCTAGCCCGTACCCACTGGTGACCCACTGAGAGAAAAAGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR GCA 90 bp | AATAAATACCCACCACGTGCCCCTCACGCCCCAGGATCAACAGAGTaGGACATCTCCTTATCCAGTCTCCCTCCATACCAGAGAACTAAC | + |
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Preference number: 1 (lower is better) Translates to: NKYPPRAPHAPGSTE*DISLSSLPPYQRTN Trigger: GTTAGTTCTCTGGTATGGAGGGAGACTGGATAAGGAGATGTCGCACTCTGTTGATCCTGGGGCGTGAGGGGCACGTGGTGGGTATTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR GCA 90 bp | AGTCCACACGCCAGGCCTGAGGAACTGTCACTGAATCCTGACGTCTaGCTCGTGGTTTTCAGTTTACTAGAACAGCCATACTGCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SPHARPEELSLNPDV*LVVFSLLEQPYCLS Trigger: AGACAGGCAGTATGGCTGTTCTAGTAAACTGAAAACCACGAGGCAGACGTCAGGATTCAGTGACAGTTCCTCAGGCCTGGCGTGTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR TCA 90 bp | GAAGGGCTGCACGGCTGCTCACACCATCTTCACACCAGCGTCATCTaGCTTGCACAGAAACACGGCTTTAACTTAAGGGTTTCTAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: EGLHGCSHHLHTSVI*LAQKHGFNLRVSKY Trigger: ATACTTAGAAACCCTTAAGTTAAAGCCGTGTTTCTGTGCAAGTCAGATGACGCTGGTGTGAAGATGGTGTGAGCAGCCGTGCAGCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR GCA 90 bp | GACAATTTCCAAGAAAGTGAGTGTTACAACTTTGCCAAAGAGAGCTaGTGTACAGTGACACAGAGCCATGAACCTACTCAGACACGCACA | + |
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Preference number: 1 (lower is better) Translates to: DNFQESECYNFAKES*CTVTQSHEPTQTRT Trigger: TGTGCGTGTCTGAGTAGGTTCATGGCTCTGTGTCACTGTACAGCAGCTCTCTTTGGCAAAGTTGTAACACTCACTTTCTTGGAAATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR TCA 90 bp | AGGCAGCACGGACGACTTCAGCTACAGCATTTGATTCCCAGGCTTTaGGGAGTTCTGAAATTTTGCGTGGTATTTCCATTACTAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: RQHGRLQLQHLIPRL*GVLKFCVVFPLLDF Trigger: AAAATCTAGTAATGGAAATACCACGCAAAATTTCAGAACTCCTCAAAGCCTGGGAATCAAATGCTGTAGCTGAAGTCGTCCGTGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR TCA 90 bp | ATAAACCTTAAAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTaGGAAGGAACGTTACCTACTGCAAATGGCTATTGGAACTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: INLKNKFALAGNGEI*EGTLPTANGYWNCK Trigger: TTTACAGTTCCAATAGCCATTTGCAGTAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTTTAAGGTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR TCA 90 bp | TATAAAAGTTCACTCTGTGAGACAAATATGAGTGCTTACATTGCTTaGTTTAAAATACAACTCACGCGCACACCAGGTTCCAGATCAGAC | + |
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Preference number: 1 (lower is better) Translates to: YKSSLCETNMSAYIA*FKIQLTRTPGSRSD Trigger: GTCTGATCTGGAACCTGGTGTGCGCGTGAGTTGTATTTTAAATCAAGCAATGTAAGCACTCATATTTGTCTCACAGAGTGAACTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR TCA 90 bp | GTAGATAAATTACTGAAGAGCTTACAAATGAGTAACTCATTCTCATaGATGAATGCCTGTTACAAGCATGATGCACTGAGAGCACTGACA | + |
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Preference number: 1 (lower is better) Translates to: VDKLLKSLQMSNSFS*MNACYKHDALRALT Trigger: TGTCAGTGCTCTCAGTGCATCATGCTTGTAACAGGCATTCATTCATGAGAATGAGTTACTCATTTGTAAGCTCTTCAGTAATTTATCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGCTCCTGAGGGAAGGAGCAGGCTGTCCACAGCCAACCCCATCCCAAGCTAGTCCTCGCAGAGCCTaGGCCTGGGGGACACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GRLLREGAGCPQPTPSQASPRRA*AWGTQG Trigger: GCCCTGTGTCCCCCAGGCGCAGGCTCTGCGAGGACT...AGCTTGGGATGGGGTTGGCTGTGGACAGCCTGCTCCTTCCCTCAGGAGCCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGCGCAGAGCCTGCGCCTaGGGGACACAGGGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWRRACA*GTQGFS Trigger: GGAGAAGCCCTGTGTCCCCCAGGCGCAGGCTCTGCG...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CAA 90 bp | AACAAAGGCAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTaGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: NKGSGSGSGGGHSPA*ELIPSLSRPSPTQT Trigger: TGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCCTTTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTCGCAGAGCCTGCGCCTGGGGGACACAGGGCTTCTCCTGGGATGATCCGCAGGATCAGCACATGTaGCAGGGAGAAGTCGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SPRRACAWGTQGFSWDDPQDQHM*QGEVGR Trigger: TCTCCCGACTTCTCCCTGCCACATGTGCTGATCCTG...CGGATCATCCCAGGAGAAGCCCTGTGTCCCCCAGGCGCAGGCTCTGCGAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGAGTCCTCGCAGAGCCTaGGCCTGGGGGACACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SAAVTVNVRSPLAFLWALSPRRA*AWGTQG Trigger: GCCCTGTGTCCCCCAGGCGCAGGCTCTGCGAGGACT...CAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACTGTAAACATTAAGCTGGACTCAGGGCCCCACACTCAGCTGCGGTCACTGCGCAGAGCCTGCGCCTaGGGGACACAGGGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GTVNIKLDSGPHTQLRSLRRACA*GTQGFS Trigger: GGAGAAGCCCTGTGTCCCCCAGGCGCAGGCTCTGCG...CAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCCAGCTTAATGTTTACAGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCCCTGGAAGGCCCGTaGCATCTTACAGGCAGCACG | + |
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Preference number: 2 (lower is better) Translates to: GLRAPHSAAVTVNVRSPLALEGP*HLTGST Trigger: CGTGCTGCCTGTAAGATGCCACGGGCCTTCCAGGGC...TAGTGGTGACCTGACATTCACAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGCAGAGCATCCATCATTaGCCACTGAGATCAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRQRQRWRALSCLGAYTQQSIHH*PLRSVA Trigger: TGCCACTGATCTCAGTGGCCAATGATGGATGCTCTG...CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGCTCCTGAGGGAAGGAGCAGGCTGTCCACAGCCAACCCCATCCCAAGCTGACAAATCAACAGACTaGCACAGCTGCAGTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: GRLLREGAGCPQPTPSQADKSTD*HSCSHR Trigger: CCTGTGACTGCAGCTGTGGCAGTCTGTTGATTTGTC...AGCTTGGGATGGGGTTGGCTGTGGACAGCCTGCTCCTTCCCTCAGGAGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | GCACACCAGGTTCCAGATCAGACCTGGCGAGGGGTGTGTGATGGAGCCCCTGGCAGTGGCAAAGAAATGTaGTCCTGCCAGCAGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: AHQVPDQTWRGVCDGAPGSGKEM*SCQQDQ Trigger: CTGATCCTGCTGGCAGGACCACATTTCTTTGCCACT...GCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGAGGACTGTGGGCTCCTaGCAAACAGAAAACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QRQRQRWRALSCLGAYTQRTVGS*QTENTK Trigger: CTTTGTGTTTTCTGTTTGCCAGGAGCCCACAGTCCT...CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR GCA 90 bp | GGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAACCAAAACCGTCCGCTaGTGGGGTTGGGATGTCATG | + |
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Preference number: 2 (lower is better) Translates to: GLRAPHSAAVTVNVRSPLTKTVR*WGWDVM Trigger: CATGACATCCCAACCCCAGCAGCGGACGGTTTTGGT...TAGTGGTGACCTGACATTCACAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGTTGATTCCCAGGCTTTaGGGAGTTCTGAAATTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QRQRQRWRALSCLGAYTQLIPRL*GVLKFC Trigger: GCAAAATTTCAGAACTCCTCAAAGCCTGGGAATCAA...CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGCCCCTGGCCTCAGTGAGTGTGAGCAGCGTTTGCTCTGCCTGACCTCTAAAGAAATGTGGTCCTaGCAGCAGGATCAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: DGAPGLSECEQRLLCLTSKEMWS*QQDQHM Trigger: CATGTGCTGATCCTGCTGGCAGGACCACATTTCTTT...AGAGGTCAGGCAGAGCAAACGCTGCTCACACTCACTGAGGCCAGGGGCTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR GCA 90 bp | CTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAACTGCAGAGGAAGGGCTaGACGGCTGCTCACACCATC | + |
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Preference number: 2 (lower is better) Translates to: LIPSLSRPSPTQTHTWNELQRKG*TAAHTI Trigger: GATGGTGTGAGCAGCCGTGCAGCCCTTCCTCTGCAG...TTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR TCA 90 bp | GCACACCAGGTTCCAGATCAGACCTGGCGAGGGGTGTGTGATGGAGCCCCTGGCACTCATTCTCATGAATaGATGCCTGTTACAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: AHQVPDQTWRGVCDGAPGTHSHE*MPVTSM Trigger: CATGCTTGTAACAGGCATTCATTCATGAGAATGAGT...GCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTCAGAGCATCCATCATTaGCCACTGAGATCAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PGEGRGHLAFSLSGSPVGQSIHH*PLRSVA Trigger: TGCCACTGATCTCAGTGGCCAATGATGGATGCTCTG...ACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTAAAGAAATGTGGTCCTaGCAGCAGGATCAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: PGEGRGHLAFSLSGSPVGKEMWS*QQDQHM Trigger: CATGTGCTGATCCTGCTGGCAGGACCACATTTCTTT...ACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGATTTTATACTTTTTGTaGGCAGGCAGCTTAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: QRQRQRWRALSCLGAYTQILYFL*AGSLSS Trigger: TGAACTTAAGCTGCCTGCGCACAAAAAGTATAAAAT...CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR TCA 90 bp | TGTAACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACAGGGTGGGAGGCTCCTaGGGGAAGGAGCAGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: CNKKDREKQMEYTMSPVHRVGGS*GKEQAV Trigger: GACAGCCTGCTCCTTCCCTCAGGAGCCTCCCACCCT...GTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGTTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTGACCAAAACCGTCCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATGGGTCTCAAACATaGGCCAGAGCATCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: ICDQNRPLLGLGCHDPAQDGSQT*ARASII Trigger: AATGATGGATGCTCTGGCCCATGTTTGAGACCCATC...CTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGGACGGTTTTGGTCACAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACACGCCTTTCCTGTGGGCTCTaGGAGCTGCAGCCACCACAC | + |
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Preference number: 2 (lower is better) Translates to: TKRTGRSKWNIRCHQSTRLSCGL*ELQPPH Trigger: GTGTGGTGGCTGCAGCTCCCAGAGCCCACAGGAAAG...GCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| 3UTR CAA 90 bp | ACAAGGATCTTGATGGGTCTCAAACATGGGCCAGAGCATCCATCATaGGCCACTGAGATCAGTGGCAAAGAAATGTGGTCCTGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TRILMGLKHGPEHPS*ATEISGKEMWSCQQ Trigger: CTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACCCATCAAGATCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGTCCATCATTGGCCACTaGGATCAGTGGCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SAAVTVNVRSPLAFLWALSIIGH*DQWQRN Trigger: ATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGA...CAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR-3UTR TCA 90 bp | GGAACTGTAAACATTAAGCTGGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTTTTCTTCCAATTTGTaGCCAAAACCGTCCGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GTVNIKLDSGPHTQLRSLFSSNL*PKPSAA Trigger: AGCAGCGGACGGTTTTGGTCACAAATTGGAAGAAAA...CAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCCAGCTTAATGTTTACAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR-3UTR TCA 90 bp | GATGGAGCCCCTGGCCTCAGTGAGTGTGAGCAGCGTTTGCTCTGCCTGACCTCTAGTAACTCATTCTCATaGATGAATGCCTGTTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: DGAPGLSECEQRLLCLTSSNSFS*MNACYK Trigger: CTTGTAACAGGCATTCATTCATGAGAATGAGTTACT...AGAGGTCAGGCAGAGCAAACGCTGCTCACACTCACTGAGGCCAGGGGCTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTAAGCGCAGGTGGGGCATaGTCTAAGGGTGGGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KISLRSQVMGKSEKERYLSAGGA*SKGGRL Trigger: GAGCCTCCCACCCTTAGAGCATGCCCCACCTGCGCT...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACACGCACTGTCACTGAATCCTaGCGTCTGCCTCGTGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TKRTGRSKWNIRCHQSTRTVTES*RLPRGF Trigger: AAAACCACGAGGCAGACGTCAGGATTCAGTGACAGT...GCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTACAGGATCAGCACATGTaGCAGGGAGAAGTCGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KISLRSQVMGKSEKERYLQDQHM*QGEVGR Trigger: TCTCCCGACTTCTCCCTGCCACATGTGCTGATCCTG...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR CAA 90 bp | AGTCTCAACAGAAAAGGCAGCGCATCAGTACACACAGACTCAGACTaGCTTCGTCATTTACTCATCGTTGCCACAGACTACCTACTAACA | + |
|
Preference number: 2 (lower is better) Translates to: SLNRKGSASVHTDSD*LRHLLIVATDYLLT Trigger: TGTTAGTAGGTAGTCTGTGGCAACGATGAGTAAATGACGAAGCAAGTCTGAGTCTGTGTGTACTGATGCGCTGCCTTTTCTGTTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACACGCGGCTTTGAGGAGTTCTaGAATTTTGCGTGGTATTTC | + |
|
Preference number: 2 (lower is better) Translates to: TKRTGRSKWNIRCHQSTRGFEEF*NFAWYF Trigger: GAAATACCACGCAAAATTTCAGAACTCCTCAAAGCC...GCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CAA 90 bp | GAACTATTCCTGCATAAGTTATATTTCCAACATCGATTCGGGTCATaGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ELFLHKLYFQHRFGS*PLVGRTMIVSTEKA Trigger: TGCCTTTTCTGTTGAGACTATCATCGTGCGTCCTACCAGAGGCAATGACCCGAATCGATGTTGGAAATATAACTTATGCAGGAATAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTTCAGTTTACTAGAACAGCCATACTGCCTGTCTGTTTCTTACAATCACAAAAAGCCAGTGACTTaGCCAGCTCTGCTCTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VVFSLLEQPYCLSVSYNHKKPVT*PALLLA Trigger: TGCTAAGAGCAGAGCTGGTCAAGTCACTGGCTTTTT...GTGATTGTAAGAAACAGACAGGCAGTATGGCTGTTCTAGTAAACTGAAAACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR GCA 90 bp | TGTAACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACCACACCCCATCTGGATaGAACCTTACTGTTTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CNKKDREKQMEYTMSPVHHTPSG*NLTVLN Trigger: GTTTAAAACAGTAAGGTTGCATCCAGATGGGGTGTG...GTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTAACTTAAGGGTTTCTAAGTATATACGGCTTTTCTACCACCAAGTTAATTTCAGCTACAGCATTTaGTTCCCAGGCTTTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GFNLRVSKYIRLFYHQVNFSYSI*FPGFEE Trigger: CTCCTCAAAGCCTGGGAATCAAATGCTGTAGCTGAA...ATTAACTTGGTGGTAGAAAAGCCGTATATACTTAGAAACCCTTAAGTTAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR GCA 72 bp | AGGCAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTaGCTTGGAGCTTATACCCAGTCTCTCCAGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RQRQRQRWRALS*LGAYTQSLQTQ Trigger: CTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CCA 72 bp | GCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTaGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AAAAAVEGTLLP*SLYPVSPDPAQ Trigger: TTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAGCCCCTGGCCTCAGTGAGTGTGAGCAGCGTTTGCTCTGCCTGACCTCTCGTCCGCTGCTGGGGTaGGGATGTCATGACCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGAPGLSECEQRLLCLTSRPLLG*GCHDPA Trigger: TGCTGGGTCATGACATCCCAACCCCAGCAGCGGACG...AGAGGTCAGGCAGAGCAAACGCTGCTCACACTCACTGAGGCCAGGGGCTCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | CAGGTCACCACTAGCTTTCCTGTGGGCTCTGGGAGCTaGAGCCACCACACCATCACCTTGAGGACACAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: QVTTSFPVGSGS*SHHTITLRTQR Trigger: GCGCTGTGTCCTCAAGGTGATGGTGTGGTGGCTGCAGCTCCCAGAGCCCACAGGAAAGCTAGTGGTGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR CCA 72 bp | TACAACTCACGCGCACACCAGGTTCCAGATCAGACCTaGCGAGGGGTGTGTGATGGAGCCCCTGGCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YNSRAHQVPDQT*RGVCDGAPGLS Trigger: ACTGAGGCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGCGCGTGAGTTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | CCACCACGTGCCCCTCACGCCCCAGGATCAACAGAGTaGGACATCTCCTTATCCAGTCTCCCTCCATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PPRAPHAPGSTE*DISLSSLPPYQ Trigger: CTGGTATGGAGGGAGACTGGATAAGGAGATGTCGCACTCTGTTGATCCTGGGGCGTGAGGGGCACGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGTAAACATTAAGCTGGACTCAGGGCCCCACACTCAGCTGCGGTCACTGCACCACACCATCACCTaGAGGACACAGCGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTVNIKLDSGPHTQLRSLHHTIT*RTQRRW Trigger: CCACCTGCGCTGTGTCCTCAAGGTGATGGTGTGGTG...CAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCCAGCTTAATGTTTACAGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR GCA 72 bp | TCTCGCCAATCCCGCCAGCCGCCTCCAAACCACTCCTaGCCTGTTTCCATCTGCTGGCTACTCTATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRQSRQPPPNHS*PVSICWLLYPE Trigger: TTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTGGCGGGATTGGCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CCA 72 bp | AAAGAAATGTGGTCCTGCCAGCAGGATCAGCACATGTaGCAGGGAGAAGTCGGGAGACAGGGGAAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KEMWSCQQDQHM*QGEVGRQGKGR Trigger: CCTGCCTTTCCCCTGTCTCCCGACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | TCACCAGTCCACACGCCAGGCCTGAGGAACTGTCACTaGATCCTGACGTCTGCCTCGTGGTTTTCAGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SPVHTPGLRNCH*ILTSASWFSVY Trigger: GTAAACTGAAAACCACGAGGCAGACGTCAGGATTCAGTGACAGTTCCTCAGGCCTGGCGTGTGGACTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | TTGGCCACTGAGATCAGTGGCAAAGAAATGTGGTCCTaGCAGCAGGATCAGCACATGTGGCAGGGAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LATEISGKEMWS*QQDQHMWQGEV Trigger: GACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR CCA 72 bp | CCATCATTGGCCACTGAGATCAGTGGCAAAGAAATGTaGTCCTGCCAGCAGGATCAGCACATGTGGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSLATEISGKEM*SCQQDQHMWQG Trigger: TCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR CCA 72 bp | TTCCAATTTGTGACCAAAACCGTCCGCTGCTGGGGTTaGGATGTCATGACCCAGCACAGGATAGAGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FQFVTKTVRCWG*DVMTQHRIEQD Trigger: GTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGGACGGTTTTGGTCACAAATTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | TCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTaGGATCAGTGGCAAAGAAATGTGGTCCTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQTWARASIIGH*DQWQRNVVLPA Trigger: TGCTGGCAGGACCACATTTCTTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | TGCCAAAGAGAGCTGCTGTACAGTGACACAGAGCCATaGACCTACTCAGACACGCACAGCTTCAGCCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: CQRELLYSDTEP*TYSDTHSFSQS Trigger: AGATTGGCTGAAGCTGTGCGTGTCTGAGTAGGTTCATGGCTCTGTGTCACTGTACAGCAGCTCTCTTTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | GCCAGGCCTGAGGAACTGTCACTGAATCCTGACGTCTaGCTCGTGGTTTTCAGTTTACTAGAACAGCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: ARPEELSLNPDV*LVVFSLLEQPY Trigger: GTATGGCTGTTCTAGTAAACTGAAAACCACGAGGCAGACGTCAGGATTCAGTGACAGTTCCTCAGGCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGGGGCCGCTATTTACTACTaGTTGAATGTTAACATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SCGHCECQVTTSFPVGSGAAIYY*LNVNIP Trigger: AGGGATGTTAACATTCAACAAGTAGTAAATAGCGGC...CCCAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTACACCACACCATCACCTaGAGGACACAGCGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KISLRSQVMGKSEKERYLHHTIT*RTQRRW Trigger: CCACCTGCGCTGTGTCCTCAAGGTGATGGTGTGGTG...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR CCA 72 bp | ATTTTCTTCCAATTTGTGACCAAAACCGTCCGCTGCTaGGGTTGGGATGTCATGACCCAGCACAGGATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IFFQFVTKTVRC*GWDVMTQHRIE Trigger: CTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGGACGGTTTTGGTCACAAATTGGAAGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGGCCGCTATTTACTACTaGTTGAATGTTAACATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SAAVTVNVRSPLAFLWALAAIYY*LNVNIP Trigger: AGGGATGTTAACATTCAACAAGTAGTAAATAGCGGC...CAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCTTTGATTCCCAGGCTTaGAGGAGTTCTGAAATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPALFPSAGYSIQNKGSGFDSQA*RSSEIL Trigger: CAAAATTTCAGAACTCCTCAAAGCCTGGGAATCAAA...GCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGTAAACATTAAGCTGGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTTTGATTCCCAGGCTTaGAGGAGTTCTGAAATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTVNIKLDSGPHTQLRSLFDSQA*RSSEIL Trigger: CAAAATTTCAGAACTCCTCAAAGCCTGGGAATCAAA...CAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCCAGCTTAATGTTTACAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR GCA 72 bp | GAAAAGGCAGCGCATCAGTACACACAGACTCAGACTTaGTTCGTCATTTACTCATCGTTGCCACAGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: EKAAHQYTQTQT*FVIYSSLPQTT Trigger: GGTAGTCTGTGGCAACGATGAGTAAATGACGAAGCAAGTCTGAGTCTGTGTGTACTGATGCGCTGCCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CCA 72 bp | GCTGAAGTCCTCAGTCCTAGAGTCACACACCCCATCTaGATGCAACCTTACTGTTTTAAACACAGACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: AEVLSPRVTHPI*MQPYCFKHRHC Trigger: GCAGTGTCTGTGTTTAAAACAGTAAGGTTGCATCCAGATGGGGTGTGTGACTCTAGGACTGAGGACTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGAGGAGTTCTGAAATTTaGCGTGGTATTTCCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: SAAVTVNVRSPLAFLWALRSSEI*RGISIT Trigger: AGTAATGGAAATACCACGCAAAATTTCAGAACTCCT...CAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | CTGGCCTCAGTGAGTGTGAGCAGCGTTTGCTCTGCCTaGCCTCTCGACAGTTATAAAATTAAGTGTGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: LASVSVSSVCSA*PLDSYKIKCVT Trigger: TGTTACACACTTAATTTTATAACTGTCGAGAGGTCAGGCAGAGCAAACGCTGCTCACACTCACTGAGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | GCCTGTGACCTGGACAAATCAACAGACTGCCACAGCTaGAGTCACAGGGGCACAATTAAGCATCTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACDLDKSTDCHS*SHRGTIKHLLK Trigger: TTTTAAAAGATGCTTAATTGTGCCCCTGTGACTGCAGCTGTGGCAGTCTGTTGATTTGTCCAGGTCACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR GCA 72 bp | AAGTCCTCAGTCCTAGAGTCACACACCCCATCTGGATaGAACCTTACTGTTTTAAACACAGACACTGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSSVLESHTPSG*NLTVLNTDTAK Trigger: CTTTGCAGTGTCTGTGTTTAAAACAGTAAGGTTGCATCCAGATGGGGTGTGTGACTCTAGGACTGAGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CCA 72 bp | ATTAAGTGTGTAACAAAAAGGACAGGGAGAAGCAAATaGAATATACGATGTCACCAGTCCACACGCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: IKCVTKRTGRSK*NIRCHQSTRQA Trigger: GGCCTGGCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGTTACACACTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTTTCAGTTTACTAGAACAGCCATACTGCCTGTCTGTTTCTTACAATCACCCAGCGTCATCTGACTaGCACAGAAACACGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VVFSLLEQPYCLSVSYNHPASSD*HRNTAL Trigger: TAAAGCCGTGTTTCTGTGCAAGTCAGATGACGCTGG...GTGATTGTAAGAAACAGACAGGCAGTATGGCTGTTCTAGTAAACTGAAAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR TCA 72 bp | GGACGACTTCAGCTACAGCATTTGATTCCCAGGCTTTaGGGAGTTCTGAAATTTTGCGTGGTATTTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: GRLQLQHLIPRL*GVLKFCVVFPL Trigger: TAATGGAAATACCACGCAAAATTTCAGAACTCCTCAAAGCCTGGGAATCAAATGCTGTAGCTGAAGTCGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | AAAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTaGGAAGGAACGTTACCTACTGCAAATGGCTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNKFALAGNGEI*EGTLPTANGYW Trigger: CCAATAGCCATTTGCAGTAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | TCACTCTGTGAGACAAATATGAGTGCTTACATTGCTTaGTTTAAAATACAACTCACGCGCACACCAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLCETNMSAYIA*FKIQLTRTPGS Trigger: GGAACCTGGTGTGCGCGTGAGTTGTATTTTAAATCAAGCAATGTAAGCACTCATATTTGTCTCACAGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR GCA 72 bp | CACAGACTCAGACTTGCTTCGTCATTTACTCATCGTTaGCACAGACTACCTACTAACAGTTATGTTTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: HRLRLASSFTHR*HRLPTNSYVLT Trigger: TGTCAAAACATAACTGTTAGTAGGTAGTCTGTGGCAACGATGAGTAAATGACGAAGCAAGTCTGAGTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR TCA 72 bp | GCAAAATATATCCAGATTGTAAGGCTACAACACCTCTaGCCAAGAACTAATTACAAACCACACAGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AKYIQIVRLQHL*PRTNYKPHRRA Trigger: AGCTCTTCTGTGTGGTTTGTAATTAGTTCTTGGTCAGAGGTGTTGTAGCCTTACAATCTGGATATATTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTAACTTAAGGGTTTCTAAGTATATACGGCTTTTCTACCACCAAGTTAATAGGAGTTCTGAAATTTaGCGTGGTATTTCCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: GFNLRVSKYIRLFYHQVNRSSEI*RGISIT Trigger: AGTAATGGAAATACCACGCAAAATTTCAGAACTCCT...ATTAACTTGGTGGTAGAAAAGCCGTATATACTTAGAAACCCTTAAGTTAAAGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| 3UTR TCA 72 bp | ATCGTTGCCACAGACTACCTACTAACAGTTATGTTTTaGCATGGACACTGCTTTATTGAGAAGTTCAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: IVATDYLLTVMF*HGHCFIEKFNF Trigger: AAAATTGAACTTCTCAATAAAGCAGTGTCCATGTCAAAACATAACTGTTAGTAGGTAGTCTGTGGCAACGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR GCA 90 bp | GCACACCAGGTTCCAGATCAGACCTGGCGAGGGGTGTGTGATGGAGCCCCTGGCGCCCTGGGGTCGGTCTaGGACAGGCCGCCGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: AHQVPDQTWRGVCDGAPGALGSV*DRPPST Trigger: CGTGCTCGGCGGCCTGTCGCAGACCGACCCCAGGGC...GCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| 3UTR CAA 72 bp | AGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTaGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSGSGGGHSPA*ELIPSLSRPSP Trigger: TGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR TCA 90 bp | GCACACCAGGTTCCAGATCAGACCTGGCGAGGGGTGTGTGATGGAGCCCCTGGCAGCACGCGCCCTTCTTaGGCAGGCCCTTACGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHQVPDQTWRGVCDGAPGSTRPS*AGPYGS Trigger: ACTTCCGTAAGGGCCTGCTCAAGAAGGGCGCGTGCT...GCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS-3UTR GCA 90 bp | AGTCCTCGCAGAGCCTGCGCCTGGGGGACACAGGGCTTCTCCTGGGATGATCCGCCCAGGTTCGCTGTGTaGAAGCGGTGGCTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRRACAWGTQGFSWDDPPRFAV*KRWLLL Trigger: CAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGG...CGGATCATCCCAGGAGAAGCCCTGTGTCCCCCAGGCGCAGGCTCTGCGAGGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CCA 90 bp | CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGCCTCAGGAGGGGCGATaGAGAGCTGGAATGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQRQRWRALSCLGAYTQPQEGR*RAGMEC Trigger: ACACTCCATTCCAGCTCTCCATCGCCCCTCCTGAGG...CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCACGTCGGCCGAGCGGTaGCGGGCCACGAAACACGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPALFPSAGYSIQNKGSGTSAER*RATKHA Trigger: CGCGTGTTTCGTGGCCCGCCACCGCTCGGCCGACGT...GCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS-3UTR CCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGCCTCAGGAGGGGCGATaGAGAGCTGGAATGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWPQEGR*RAGMEC Trigger: ACACTCCATTCCAGCTCTCCATCGCCCCTCCTGAGG...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCTCCTGAGGGAAGGAGCAGGCTGTCCACAGCCAACCCCATCCCAAGCTTCCCAACAGGATTGCTaGGGACAAAGCGTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRLLREGAGCPQPTPSQASQQDC*GQSVLL Trigger: AAGAAGGACGCTTTGTCCCCAGCAATCCTGTTGGGA...AGCTTGGGATGGGGTTGGCTGTGGACAGCCTGCTCCTTCCCTCAGGAGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR TCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGGCTGGAATGGAGTGTTaGAGTAGTGCTGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWAGMEC*SSAAAR Trigger: ACGAGCAGCAGCACTACTTCAACACTCCATTCCAGC...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR TCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGGTACTCAGCCACTATTaGGAGGAGGACGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWVLSHY*EEDGDV Trigger: GACATCACCGTCCTCCTCTCAATAGTGGCTGAGTAC...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR GCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGGGACATCGAAAGATGTaGTATCAGCAGCGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWGHRKM*YQQRLG Trigger: GCCCAGACGCTGCTGATAGCACATCTTTCGATGTCC...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR GCA 90 bp | CCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGGATAGAGCAGGACTGTGGGCGCTTGCTCAGCAATaGTTCTTGCAGTCCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLLGLGCHDPAQDRAGLWALAQQ*FLQSAV Trigger: TACAGCGGACTGCAAGAAGCATTGCTGAGCAAGCGC...CCACAGTCCTGCTCTATCCTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR TCA 90 bp | GGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTGGAATGGAGTGTTaGAGTAGTGCTGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRAPHSAAVTVNVRSPLAGMEC*SSAAAR Trigger: ACGAGCAGCAGCACTACTTCAACACTCCATTCCAGC...TAGTGGTGACCTGACATTCACAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR GCA 90 bp | GGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCCAGCTCATGCGCTTaGTCAGCAATGCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRAPHSAAVTVNVRSPLASSCA*SAMLLA Trigger: TGCAAGAAGCATTGCTGAGCAAGCGCATGAGCTGGC...TAGTGGTGACCTGACATTCACAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR CCA 90 bp | GGAACTGTAAACATTAAGCTGGACTCAGGGCCCCACACTCAGCTGCGGTCACTGGCTGTGTGCAAGCGGTaGCTACTTCTGTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GTVNIKLDSGPHTQLRSLAVCKR*LLLSST Trigger: GGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGC...CAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCCAGCTTAATGTTTACAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTGTACTCAGCCACTATTaGGAGGAGGACGGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGEGRGHLAFSLSGSPVGVLSHY*EEDGDV Trigger: GACATCACCGTCCTCCTCTCAATAGTGGCTGAGTAC...ACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR TCA 90 bp | ATTTGTGACCAAAACCGTCCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGTTGAGAGGAGGACGGTaGTGTCATCTGGCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICDQNRPLLGLGCHDPAQLRGGR*CHLAFH Trigger: GTGGAAAGCCAGATGACATCACCGTCCTCCTCTCAA...CTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGGACGGTTTTGGTCACAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACACGCCCTTACGGAAGTCCTTaGCGAAGCCGCAGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TKRTGRSKWNIRCHQSTRPYGSP*RSRSPP Trigger: CGGCGGGCTGCGGCTTCGGCAAGGACTTCCGTAAGG...GCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCCGATGCAGGCTGTGCTaGTACCCAGCAAAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TPALFPSAGYSIQNKGSGRCRLC*YPAKEL Trigger: AAGTTCCTTTGCTGGGTAGCAGCACAGCCTGCATCG...GCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR GCA 90 bp | CTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAACCCAGGTTCGCTGTGTaGAAGCGGTGGCTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPSLSRPSPTQTHTWNEPRFAV*KRWLLL Trigger: CAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGG...TTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR CCA 90 bp | AGAAATGTGGTCCTGCCAGCAGGATCAGCACATGTGGCAGGGAGAAGTCGGGAGTCCCAACAGGATTGCTaGGGACAAAGCGTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNVVLPAGSAHVAGRSRESQQDC*GQSVLL Trigger: AAGAAGGACGCTTTGTCCCCAGCAATCCTGTTGGGA...CTCCCGACTTCTCCCTGCCACATGTGCTGATCCTGCTGGCAGGACCACATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTCTCAGCAATGCTTCTTaGAGTCCGCTGTATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGEGRGHLAFSLSGSPVGLSNAS*SPLYTL Trigger: GAGAGTATACAGCGGACTGCAAGAAGCATTGCTGAG...ACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGAAGGGAGAGGTCACCTCGCTTTTTCTCTCAGTGGGTCACCAGTGGGTGATGGAGAGCTGGAATaGAGTGTTGAAGTAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGEGRGHLAFSLSGSPVGDGELE*SVEVVL Trigger: CAGCACTACTTCAACACTCCATTCCAGCTCTCCATC...ACCCACTGGTGACCCACTGAGAGAAAAAGCGAGGTGACCTCTCCCTTCTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR TCA 90 bp | GGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAATTGAGAGGAGGACGGTaGTGTCATCTGGCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKHGPEHPSLATEISGKLRGGR*CHLAFH Trigger: GTGGAAAGCCAGATGACATCACCGTCCTCCTCTCAA...TTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | GGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAACGATGCAGGCTGTGCTaGTACCCAGCAAAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKHGPEHPSLATEISGKRCRLC*YPAKEL Trigger: AAGTTCCTTTGCTGGGTAGCAGCACAGCCTGCATCG...TTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | GGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAAGGACATCGAAAGATGTaGTATCAGCAGCGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKHGPEHPSLATEISGKGHRKM*YQQRLG Trigger: GCCCAGACGCTGCTGATAGCACATCTTTCGATGTCC...TTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | ATTTGTGACCAAAACCGTCCGCTGCTGGGGTTGGGATGTCATGACCCAGCACAGCTCAGCAATGCTTCTTaGAGTCCGCTGTATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICDQNRPLLGLGCHDPAQLSNAS*SPLYTL Trigger: GAGAGTATACAGCGGACTGCAAGAAGCATTGCTGAG...CTGTGCTGGGTCATGACATCCCAACCCCAGCAGCGGACGGTTTTGGTCACAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAAGGACAGGGAGAAGCAAATGGAATATACGATGTCACCAGTCCACACGCGCTGTGTGCAAGCGGTaGCTACTTCTGTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TKRTGRSKWNIRCHQSTRAVCKR*LLLSST Trigger: GGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGC...GCGTGTGGACTGGTGACATCGTATATTCCATTTGCTTCTCCCTGTCCTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS-3UTR CCA 90 bp | AGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGGGATGATATCTCCTAACTaGACATCGAAAGATGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCGHCECQVTTSFPVGSGMISPN*TSKDVL Trigger: TAGCACATCTTTCGATGTCCAGTTAGGAGATATCAT...CCCAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTAGCGCTTGCTCAGCAATaGTTCTTGCAGTCCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KISLRSQVMGKSEKERYLALAQQ*FLQSAV Trigger: TACAGCGGACTGCAAGAAGCATTGCTGAGCAAGCGC...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTAGCCAGCTCATGCGCTTaGTCAGCAATGCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KISLRSQVMGKSEKERYLASSCA*SAMLLA Trigger: TGCAAGAAGCATTGCTGAGCAAGCGCATGAGCTGGC...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTAACTTAAGGGTTTCTAAGTATATACGGCTTTTCTACCACCAAGTTAATTGTCCAGCACCACGATaGAGGCTGTGCTGCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFNLRVSKYIRLFYHQVNCPAPR*RLCCYP Trigger: TGGGTAGCAGCACAGCCTGCATCGTGGTGCTGGACA...ATTAACTTGGTGGTAGAAAAGCCGTATATACTTAGAAACCCTTAAGTTAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CCA 90 bp | AAAATAAGTTTGCGCTCGCAGGTAATGGGGAAATCTGAGAAGGAACGTTACCTAGATGGAGAGCTGGAATaGAGTGTTGAAGTAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KISLRSQVMGKSEKERYLDGELE*SVEVVL Trigger: CAGCACTACTTCAACACTCCATTCCAGCTCTCCATC...TAGGTAACGTTCCTTCTCAGATTTCCCCATTACCTGCGAGCGCAAACTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| 3UTR CAA 72 bp | CTGCATAAGTTATATTTCCAACATCGATTCGGGTCATaGCCTCTGGTAGGACGCACGATGATAGTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LHKLYFQHRFGS*PLVGRTMIVST Trigger: TGTTGAGACTATCATCGTGCGTCCTACCAGAGGCAATGACCCGAATCGATGTTGGAAATATAACTTATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS GCA 90 bp | CTGCCACCACCGCCGCCGCCGCCGCCGCCCGCCCTGGGGTCGGTCTaGGACAGGCCGCCGAGCACGGCACGGGCCACCAGGCGTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: LPPPPPPPPPALGSV*DRPPSTARATRRPY Trigger: GTATGGACGCCTGGTGGCCCGTGCCGTGCTCGGCGGCCTGTCGCAGACCGACCCCAGGGCGGGCGGCGGCGGCGGCGGCGGTGGTGGCAG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS GCA 90 bp | TGCCGAAGCCGCAGCCCGCCGTCACCAACCCGTAGTCGCCGCTGCTaGCACCACCGCCGCCGCCGCCGCCGCCCGCCCTGGGGTCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSRSPPSPTRSRRC*HHRRRRRRPPWGRS Trigger: AGACCGACCCCAGGGCGGGCGGCGGCGGCGGCGGCGGTGGTGGCAGCAGCGGCGACTACGGGTTGGTGACGGCGGGCTGCGGCTTCGGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS TCA 90 bp | GGCGGGCCACGAAACACGCGTCGTCCCCGTAGCACGCGCCCTTCTTaGGCAGGCCCTTACGGAAGTCCTTGCCGAAGCCGCAGCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGPRNTRRPRSTRPS*AGPYGSPCRSRSPP Trigger: CGGCGGGCTGCGGCTTCGGCAAGGACTTCCGTAAGGGCCTGCTCAAGAAGGGCGCGTGCTACGGGGACGACGCGTGTTTCGTGGCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS GCA 90 bp | CCGCCCCGGACCACCAGGAAGCCCGAGTCACCCAGGTTCGCTGTGTaGAAGCGGTGGCTACTTCTGTCCAGCACCACGATGCAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPRTTRKPESPRFAV*KRWLLLSSTTMQAV Trigger: CACAGCCTGCATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGGTGACTCGGGCTTCCTGGTGGTCCGGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS TCA 90 bp | CCCCCTCGGCCTCAGGAGGGGCGATGGAGAGCTGGAATGGAGTGTTaGAGTAGTGCTGCTGCTCGTCAGACCGGTGCACAACCTCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRPQEGRWRAGMEC*SSAAARQTGAQPRR Trigger: GCGGCGAGGTTGTGCACCGGTCTGACGAGCAGCAGCACTACTTCAACACTCCATTCCAGCTCTCCATCGCCCCTCCTGAGGCCGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS CCA 90 bp | ACCACCAGGAAGCCCGAGTCACCCAGGTTCGCTGTGTGCAAGCGGTaGCTACTTCTGTCCAGCACCACGATGCAGGCTGTGCTGCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: TTRKPESPRFAVCKR*LLLSSTTMQAVLLP Trigger: GGGTAGCAGCACAGCCTGCATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGGTGACTCGGGCTTCCTGGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS CCA 90 bp | CAGGACAACCCCCTCGGCCTCAGGAGGGGCGATGGAGAGCTGGAATaGAGTGTTGAAGTAGTGCTGCTGCTCGTCAGACCGGTGCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: QDNPLGLRRGDGELE*SVEVVLLLVRPVHN Trigger: GTTGTGCACCGGTCTGACGAGCAGCAGCACTACTTCAACACTCCATTCCAGCTCTCCATCGCCCCTCCTGAGGCCGAGGGGGTTGTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCCCCTTACGGAAGTCCTaGCCGAAGCCGCAGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPALFPSAGYSIQNKGSGPLRKS*PKPQPA Trigger: GGCGGGCTGCGGCTTCGGCAAGGACTTCCGTAAGGG...GCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR CAA 90 bp | GGACTCAGGGCCCCACACTCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGGCCAGCTCATGCGCTaGCTCAGCAATGCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRAPHSAAVTVNVRSPLGQLMR*LSNASC Trigger: GCAAGAAGCATTGCTGAGCAAGCGCATGAGCTGGCC...TAGTGGTGACCTGACATTCACAGTGACCGCAGCTGAGTGTGGGGCCCTGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
||
| CDS-3UTR CAA 90 bp | GCACACCAGGTTCCAGATCAGACCTGGCGAGGGGTGTGTGATGGAGCCCCTGGCCCCAGCAAAGGAACTTaGTTTTGCAGCAACTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AHQVPDQTWRGVCDGAPGPSKGT*FCSNSQ Trigger: CTGTGAGTTGCTGCAAAACAAAGTTCCTTTGCTGGG...GCCAGGGGCTCCATCACACACCCCTCGCCAGGTCTGATCTGGAACCTGGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCGCAGAGCCTGCGCCTGGGGGACACAGGGCTTCTCCTGGGATGATCCGCAAAGGAACTTTGTTTaGCAGCAACTCACAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: SPRRACAWGTQGFSWDDPQRNFV*QQLTVA Trigger: AGCTACTGTGAGTTGCTGCAAAACAAAGTTCCTTTG...CGGATCATCCCAGGAGAAGCCCTGTGTCCCCCAGGCGCAGGCTCTGCGAGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS GCA 90 bp | GGTTCGCTGTGTGCAAGCGGTGGCTACTTCTGTCCAGCACCACGATaGAGGCTGTGCTGCTACCCAGCAAAGGAACTTTGTTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GSLCASGGYFCPAPR*RLCCYPAKELCFAA Trigger: TGCTGCAAAACAAAGTTCCTTTGCTGGGTAGCAGCACAGCCTGCATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGCGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | GGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAAGGCCAGCTCATGCGCTaGCTCAGCAATGCTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GLKHGPEHPSLATEISGKGQLMR*LSNASC Trigger: GCAAGAAGCATTGCTGAGCAAGCGCATGAGCTGGCC...TTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGGCTCAGCAATGCTTCTaGCAGTCCGCTGTATACTCT | + |
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Preference number: 5 (lower is better) Translates to: SAAVTVNVRSPLAFLWALAQQCF*QSAVYS Trigger: AGAGTATACAGCGGACTGCAAGAAGCATTGCTGAGC...CAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | GGTCTCAAACATGGGCCAGAGCATCCATCATTGGCCACTGAGATCAGTGGCAAAGCTCAGCAATGCTTCTaGCAGTCCGCTGTATACTCT | + |
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Preference number: 5 (lower is better) Translates to: GLKHGPEHPSLATEISGKAQQCF*QSAVYS Trigger: AGAGTATACAGCGGACTGCAAGAAGCATTGCTGAGC...TTTGCCACTGATCTCAGTGGCCAATGATGGATGCTCTGGCCCATGTTTGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCGGTCACTGTGAATGTCAGGTCACCACTAGCTTTCCTGTGGGCTCTGGGAAGGTGACATATAATTaGGGTCATAGGCCAGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: SCGHCECQVTTSFPVGSGKVTYN*GHRPAH Trigger: ATGAGCTGGCCTATGACCCAAATTATATGTCACCTT...CCCAGAGCCCACAGGAAAGCTAGTGGTGACCTGACATTCACAGTGACCGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS CCA 90 bp | TTGTCAAAGAGCCCATCTGTTGCTGTCAGGATGATATCTCCTAACTaGACATCGAAAGATGTGCTATCAGCAGCGTCTGGGCTGTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: LSKSPSVAVRMISPN*TSKDVLSAASGLSL Trigger: GAGCGACAGCCCAGACGCTGCTGATAGCACATCTTTCGATGTCCAGTTAGGAGATATCATCCTGACAGCAACAGATGGGCTCTTTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS TCA 90 bp | TGTAATCAGGCATGTTGTCAAAGAGCCCATCTGTTGCTGTCAGGATaGTATCTCCTAACTGGACATCGAAAGATGTGCTATCAGCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: CNQACCQRAHLLLSG*YLLTGHRKMCYQQR Trigger: ACGCTGCTGATAGCACATCTTTCGATGTCCAGTTAGGAGATATCATCCTGACAGCAACAGATGGGCTCTTTGACAACATGCCTGATTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCGTGGTTTTCAGTTTACTAGAACAGCCATACTGCCTGTCTGTTTCTTACAAGGTGACATATAATTaGGGTCATAGGCCAGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: CLVVFSLLEQPYCLSVSYKVTYN*GHRPAH Trigger: ATGAGCTGGCCTATGACCCAAATTATATGTCACCTT...GTAAGAAACAGACAGGCAGTATGGCTGTTCTAGTAAACTGAAAACCACGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS-3UTR CAA 90 bp | GGCTTTAACTTAAGGGTTTCTAAGTATATACGGCTTTTCTACCACCAAGTTAATCCCAGCAAAGGAACTTaGTTTTGCAGCAACTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GFNLRVSKYIRLFYHQVNPSKGT*FCSNSQ Trigger: CTGTGAGTTGCTGCAAAACAAAGTTCCTTTGCTGGG...ATTAACTTGGTGGTAGAAAAGCCGTATATACTTAGAAACCCTTAAGTTAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTAACTTAAGGGTTTCTAAGTATATACGGCTTTTCTACCACCAAGTTAATCAAAGGAACTTTGTTTaGCAGCAACTCACAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: GFNLRVSKYIRLFYHQVNQRNFV*QQLTVA Trigger: AGCTACTGTGAGTTGCTGCAAAACAAAGTTCCTTTG...ATTAACTTGGTGGTAGAAAAGCCGTATATACTTAGAAACCCTTAAGTTAAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS TCA 72 bp | CGAAACACGCGTCGTCCCCGTAGCACGCGCCCTTCTTaGGCAGGCCCTTACGGAAGTCCTTGCCGAAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RNTRRPRSTRPS*AGPYGSPCRSR Trigger: GCGGCTTCGGCAAGGACTTCCGTAAGGGCCTGCTCAAGAAGGGCGCGTGCTACGGGGACGACGCGTGTTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053426.15 |
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| CDS CCA 72 bp | CCCCTCGGCCTCAGGAGGGGCGATGGAGAGCTGGAATaGAGTGTTGAAGTAGTGCTGCTGCTCGTCAGACCG | + |
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Preference number: 6 (lower is better) Translates to: PLGLRRGDGELE*SVEVVLLLVRP Trigger: CGGTCTGACGAGCAGCAGCACTACTTCAACACTCCATTCCAGCTCTCCATCGCCCCTCCTGAGGCCGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS GCA 72 bp | ACCACCAGGAAGCCCGAGTCACCCAGGTTCGCTGTGTaGAAGCGGTGGCTACTTCTGTCCAGCACCACGATG | + |
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Preference number: 6 (lower is better) Translates to: TTRKPESPRFAV*KRWLLLSSTTM Trigger: CATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGGTGACTCGGGCTTCCTGGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS CCA 72 bp | AAGCCCGAGTCACCCAGGTTCGCTGTGTGCAAGCGGTaGCTACTTCTGTCCAGCACCACGATGCAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KPESPRFAVCKR*LLLSSTTMQAV Trigger: CACAGCCTGCATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACACAGCGAACCTGGGTGACTCGGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS GCA 72 bp | TGTGCAAGCGGTGGCTACTTCTGTCCAGCACCACGATaGAGGCTGTGCTGCTACCCAGCAAAGGAACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CASGGYFCPAPR*RLCCYPAKELC Trigger: ACAAAGTTCCTTTGCTGGGTAGCAGCACAGCCTGCATCGTGGTGCTGGACAGAAGTAGCCACCGCTTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS CAA 72 bp | GCAGGCTGTGCTGCTACCCAGCAAAGGAACTTTGTTTaGCAGCAACTCACAGTAGCTCGTGGTGAGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: AGCAATQQRNFV*QQLTVARGENP Trigger: GGGATTCTCACCACGAGCTACTGTGAGTTGCTGCAAAACAAAGTTCCTTTGCTGGGTAGCAGCACAGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS TCA 72 bp | GAACTTTGTTTTGCAGCAACTCACAGTAGCTCGTGGTaGGAATCCCAACAGGATTGCTGGGGACAAAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: ELCFAATHSSSW*ESQQDCWGQSV Trigger: GACGCTTTGTCCCCAGCAATCCTGTTGGGATTCTCACCACGAGCTACTGTGAGTTGCTGCAAAACAAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS TCA 72 bp | AGTCCGTGTACTCAGCCACTATTGAGAGGAGGACGGTaGTGTCATCTGGCTTTCCACCTCTCACATTTAATC | + |
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Preference number: 6 (lower is better) Translates to: SPCTQPLLRGGR*CHLAFHLSHLI Trigger: GATTAAATGTGAGAGGTGGAAAGCCAGATGACATCACCGTCCTCCTCTCAATAGTGGCTGAGTACACGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS TCA 72 bp | GCATGTTGTCAAAGAGCCCATCTGTTGCTGTCAGGATaGTATCTCCTAACTGGACATCGAAAGATGTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: ACCQRAHLLLSG*YLLTGHRKMCY Trigger: ATAGCACATCTTTCGATGTCCAGTTAGGAGATATCATCCTGACAGCAACAGATGGGCTCTTTGACAACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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| CDS CAA 90 bp | TTAATCCATTGTCACATGCAAACTGTGCAAAAGGTGACATATAATTaGGGTCATAGGCCAGCTCATGCGCTTGCTCAGCAATGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIHCHMQTVQKVTYN*GHRPAHALAQQCFL Trigger: CAAGAAGCATTGCTGAGCAAGCGCATGAGCTGGCCTATGACCCAAATTATATGTCACCTTTTGCACAGTTTGCATGTGACAATGGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053426.15 ENSMUST00000119015.2 |
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