Pregenerated sensors for PPT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015474Ensembl transcript IDs: ENSMUST00000064953.15, ENSMUST00000166040.9, ENSMUST00000167097.9, ENSMUST00000168391.9, ENSMUST00000169067.9, ENSMUST00000169287.2, ENSMUST00000169969.8, ENSMUST00000170345.8, ENSMUST00000171121.9, ENSMUST00000171376.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGGGAGCCCTGGTGGGGGTCGGGCAGTGTGGGAATGACAAGATaGTTGCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GGEPWWGSGSVGMTR*LQACQSLASASQGH Trigger: GTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCAGGGCTCCCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR GCA 90 bp | TGGTGGGGGTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATaGCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: WWGSGSVGMTRWLQA*QSLASASQGHRLIS Trigger: AGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGGAGGGGAGCCCTGGTaGGGGTCGGGCAGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGGGEPW*GSGSVG Trigger: TCCCACACTGCCCGACCCCCACCAGGGCTCCCCTCC...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CAA 90 bp | GGGGAGCCCTGGTGGGGGTCGGGCAGTGTGGGAATGACAAGATGGTaGCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGC | + |
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Preference number: 2 (lower is better) Translates to: GEPWWGSGSVGMTRW*QACQSLASASQGHR Trigger: GCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCAGGGCTCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTCCAGAGCCTGGCATCTaGTTCCCAAGGCCACCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGPEPGI*FPRPPL Trigger: AAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGG...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCGAGGTGGGCAGGGGCTaGGTTCTCCTCCGATACAGC | + |
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Preference number: 2 (lower is better) Translates to: GTGGSPNLRWALQATDIPEVGRG*VLLRYS Trigger: GCTGTATCGGAGGAGAACCCAGCCCCTGCCCACCTC...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAACCAGAGCCTGGCATCTaGTTCCCAAGGCCACCGCTT | + |
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Preference number: 2 (lower is better) Translates to: GWVLLRYSQTRRSNSSGEPEPGI*FPRPPL Trigger: AAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGG...TTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATGCCAGAGCCTGGCATCCCCAAGGCCACCGCTTaGTCTCTGGGCTGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: VGQCGNDKMVAGMPEPGIPKATA*SLGWGI Trigger: AATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTGGG...GATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTAGATGGTTGCAGGCATaGCAGAGCCTGGCATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGRWLQA*QSLASA Trigger: AGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCT...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCCCACCGCTTGATCTCTaGGCTGGGGAATTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: WVLLRYSQTRRSNSSGEAPPLDL*AGEFLE Trigger: CTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGG...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CAA 90 bp | TTGCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTaGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: LQACQSLASASQGHR*ISGLGNSWRPLRTS Trigger: AGATGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCGGGCTGGGGAATTCCTaGAGACCACTGAGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: GTGGSPNLRWALQATDIPGLGNS*RPLRTS Trigger: AGATGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCC...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCAAGGCATGCCAGAGCCTaGCATCTGCTTCCCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SQTRRSNSSGEATVKNLARHARA*HLLPKA Trigger: GGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCT...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCATCCCAACCTCAGCCGTaGCAGAAAGGGAGAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQTRRSNSSGEATVKNLASQPQP*QKGRAW Trigger: CCACGCTCTCCCTTTCTGCCACGGCTGAGGTTGGGA...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCCCCAAGGCCACCGCTTaGTCTCTGGGCTGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: RRSNSSGEATVKNLALASPKATA*SLGWGI Trigger: AATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTGGG...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACGGGCTGGGGAATTCCTaGAGACCACTGAGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: ARPGEATAAVKPQLKTWHGLGNS*RPLRTS Trigger: AGATGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCC...GTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCCCACCGCTTGATCTCTaGGCTGGGGAATTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RRSNSSGEATVKNLALASPPLDL*AGEFLE Trigger: CTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGG...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCAACACTGACACTTCAACCCAAGGCCACCGCTTaGTCTCTGGGCTGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: KPEMGLAGHRYSPTLTLQPKATA*SLGWGI Trigger: AATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTGGG...TTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCGGGCTGGGGAATTCCTaGAGACCACTGAGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: RRSNSSGEATVKNLALASGLGNS*RPLRTS Trigger: AGATGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCC...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCAACACTGACACTTCAATCCCAACCTCAGCCGTaGCAGAAAGGGAGAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: KPEMGLAGHRYSPTLTLQSQPQP*QKGRAW Trigger: CCACGCTCTCCCTTTCTGCCACGGCTGAGGTTGGGA...TTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAACGGGGATAACAGAAGCTAAAAATGTCCTGAGTGGCCTGGAAGAAGACAGGCATGCCAGAGCCTaGCATCTGCTTCCCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RETGITEAKNVLSGLEEDRHARA*HLLPKA Trigger: GGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCT...GTCTTCTTCCAGGCCACTCAGGACATTTTTAGCTTCTGTTATCCCCGTTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR TCA 72 bp | GAGGGGAGCCCTGGTGGGGGTCGGGCAGTGTGGGAATaGCAAGATGGTTGCAGGCATGCCAGAGCCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: EGSPGGGRAVWE*QDGCRHARAWH Trigger: ATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCAGGGCTCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CCA 72 bp | CCCTGGTGGGGGTCGGGCAGTGTGGGAATGACAAGATaGTTGCAGGCATGCCAGAGCCTGGCATCTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PWWGSGSVGMTR*LQACQSLASAS Trigger: GGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCTTATGGGTGCCCCTCTaGGTGGGGAGGCTAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: GTGGSPNLRWALQATDIPLWVPL*VGRLAT Trigger: TGTGGCTAGCCTCCCCACCAAGAGGGGCACCCATAA...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR GCA 72 bp | TCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATaGCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGC | + |
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Preference number: 3 (lower is better) Translates to: SGSVGMTRWLQA*QSLASASQGHR Trigger: GCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CCA 72 bp | CCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTaGGCTGGGGAATTCCTGGAGACCACTGAGGACATC | + |
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Preference number: 3 (lower is better) Translates to: PGICFPRPPLDL*AGEFLETTEDI Trigger: GATGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CCA 72 bp | AAATGTCCTGAGTGGCCTGGAAGAAGACCCCTGAGGTaGGCAGGGGCTGGGTTCTCCTCCGATACAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KCPEWPGRRPLR*AGAGFSSDTAR Trigger: TCTGGCTGTATCGGAGGAGAACCCAGCCCCTGCCCACCTCAGGGGTCTTCTTCCAGGCCACTCAGGACATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCGGAATGACAAGATGGTaGCAGGCATGCCAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GTGGSPNLRWALQATDIPGMTRW*QACQSL Trigger: CAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCC...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCGTAGGGGACCAGGACTaGTCATTCACAGAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WVLLRYSQTRRSNSSGEAVGDQD*SFTEEQ Trigger: CTGCTCCTCTGTGAATGACAAGTCCTGGTCCCCTAC...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGTAGGGGACCAGGACTaGTCATTCACAGAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GWVLLRYSQTRRSNSSGEVGDQD*SFTEEQ Trigger: CTGCTCCTCTGTGAATGACAAGTCCTGGTCCCCTAC...TTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR TCA 72 bp | AAAGGGAGAGCGTGGAGGCGTCCCCAAGTGAGGACATaGGGTAGGGGACCAGGACTTGTCATTCACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KGRAWRRPQVRT*GRGPGLVIHRG Trigger: TCCTCTGTGAATGACAAGTCCTGGTCCCCTACCTCATGTCCTCACTTGGGGACGCCTCCACGCTCTCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CCA 72 bp | GAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTaGCACTTGCTTCCCAACCTCAGCCGTGGCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: EATAAVKPQLKT*HLLPNLSRGRK Trigger: CTTTCTGCCACGGCTGAGGTTGGGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGCCTGGGAGTAGCAGATaGGGTGCACTCCTTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWPGSSR*GALLQG Trigger: CCCCTGAAGGAGTGCACCTCATCTGCTACTCCCAGG...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGCCTGGGAGTAGCAGATaGGGTGCACTCCTTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGPGSSR*GALLQG Trigger: CCCCTGAAGGAGTGCACCTCATCTGCTACTCCCAGG...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCCTGGGAGTAGCAGATaGGGTGCACTCCTTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GTGGSPNLRWALQATDIPPGSSR*GALLQG Trigger: CCCCTGAAGGAGTGCACCTCATCTGCTACTCCCAGG...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGTCCGTGTCTCCATACTaGCCCATCTGTGGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWSVSPY*PICGEE Trigger: CTCCTCCCCACAGATGGGCCAGTATGGAGACACGGA...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGTCCGTGTCTCCATACTaGCCCATCTGTGGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGSVSPY*PICGEE Trigger: CTCCTCCCCACAGATGGGCCAGTATGGAGACACGGA...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGAGAGATGCCAGCCATaGGACACCTCACTATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWERCQP*DTSLWP Trigger: GGGCCATAGTGAGGTGTCCCATGGCTGGCATCTCTC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAGAGATGCCAGCCATaGGACACCTCACTATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGERCQP*DTSLWP Trigger: GGGCCATAGTGAGGTGTCCCATGGCTGGCATCTCTC...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGVAEAV*TVKEPV Trigger: CACGGGCTCTTTGACAGTTCATACAGCTTCCGCCAC...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWVAEAV*TVKEPV Trigger: CACGGGCTCTTTGACAGTTCATACAGCTTCCGCCAC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGVAEAV*TVKEPV Trigger: CACGGGCTCTTTGACAGTTCATACAGCTTCCGCCAC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACACCTGGGAGTAGCAGATaGGGTGCACTCCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTPGSSR*GALLQG Trigger: CCCCTGAAGGAGTGCACCTCATCTGCTACTCCCAGG...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| 3UTR CAA 72 bp | TGGTGGGGGTCGGGCAGTGTGGGAATGACAAGATGGTaGCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WWGSGSVGMTRW*QACQSLASASQ Trigger: TTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGACCCCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACCCTGGGAGTAGCAGATaGGGTGCACTCCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGEATAAVKPQLKTWHPGSSR*GALLQG Trigger: CCCCTGAAGGAGTGCACCTCATCTGCTACTCCCAGG...GTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGGAGGAGAGGGAGATaGAAGAGTCCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWGRRGR*KSPHCG Trigger: ACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGGGAGGAGAGGGAGATaGAAGAGTCCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGGRRGR*KSPHCG Trigger: ACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWILAHL*GGEGDE Trigger: TTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTAT...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGCCATGCAGTGGCATTaGGATGGTCTCTTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWAMQWH*DGLFPH Trigger: ATGGGGAAAGAGACCATCCCAATGCCACTGCATGGC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGCCATGCAGTGGCATTaGGATGGTCTCTTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGAMQWH*DGLFPH Trigger: ATGGGGAAAGAGACCATCCCAATGCCACTGCATGGC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGAGAGATGCCAGCCATaGGACACCTCACTATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTERCQP*DTSLWP Trigger: GGGCCATAGTGAGGTGTCCCATGGCTGGCATCTCTC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTVAEAV*TVKEPV Trigger: CACGGGCTCTTTGACAGTTCATACAGCTTCCGCCAC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGAAAGCTGCTGGCATTaGGGTACAAGTCATCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWESCWH*GTSHRG Trigger: ACCACGATGACTTGTACCTCAATGCCAGCAGCTTTC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGAANSL*HRRDQA Trigger: TGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWAANSL*HRRDQA Trigger: TGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGAGAGCCACGGCTCAATaGAAGTATCGTAGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWRATAQ*KYRRAY Trigger: GTACGCTCTACGATACTTGCATTGAGCCGTGGCTCT...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGAGAGCCACGGCTCAATaGAAGTATCGTAGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGRATAQ*KYRRAY Trigger: GTACGCTCTACGATACTTGCATTGAGCCGTGGCTCT...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTGGSPNLRWALQATDIPILAHL*GGEGDE Trigger: TTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTAT...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGTCTTCCGCCATGCAGTaGCATTGGGATGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWSSAMQ*HWDGLF Trigger: AAAGAGACCATCCCAATGCCACTGCATGGCGGAAGA...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGTCTTCCGCCATGCAGTaGCATTGGGATGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGSSAMQ*HWDGLF Trigger: AAAGAGACCATCCCAATGCCACTGCATGGCGGAAGA...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGGGAGGAGAGGGAGATaGAAGAGTCCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTGRRGR*KSPHCG Trigger: ACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | GTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATGCCAGAGCCTGGCATCGGGAGGAGAGGGAGATaGAAGAGTCCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGQCGNDKMVAGMPEPGIGRRGR*KSPHCG Trigger: ACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCC...GATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAAGAGCCACGGCTCAATaGAAGTATCGTAGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GWVLLRYSQTRRSNSSGERATAQ*KYRRAY Trigger: GTACGCTCTACGATACTTGCATTGAGCCGTGGCTCT...TTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCAGAGCCACGGCTCAATaGAAGTATCGTAGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WVLLRYSQTRRSNSSGEARATAQ*KYRRAY Trigger: GTACGCTCTACGATACTTGCATTGAGCCGTGGCTCT...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTILAHL*GGEGDE Trigger: TTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTAT...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGATCATAGGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLIIGTGGSPNLRWALQAILAHL*GGEGDE Trigger: TTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTAT...GGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCCTATGATCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCATCCGTGTCTCCATACTaGCCCATCTGTGGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQTRRSNSSGEATVKNLASVSPY*PICGEE Trigger: CTCCTCCCCACAGATGGGCCAGTATGGAGACACGGA...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGCCAGTAGTTGCAAATaGAAAATTCCTGGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWASSCK*KIPGPK Trigger: CTTGGGGCCAGGAATTTTCCATTTGCAACTACTGGC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGCCAGTAGTTGCAAATaGAAAATTCCTGGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGASSCK*KIPGPK Trigger: CTTGGGGCCAGGAATTTTCCATTTGCAACTACTGGC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCTCTTCCGCCATGCAGTaGCATTGGGATGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVLLRYSQTRRSNSSGEASSAMQ*HWDGLF Trigger: AAAGAGACCATCCCAATGCCACTGCATGGCGGAAGA...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACACATTGTGGTTATCCATaGCAGACAGCAAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTHCGYP*QTAKHG Trigger: GCCGTGCTTTGCTGTCTGTCATGGATAACCACAATG...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATGCCAGAGCCTGGCATCCATTGTGGTTATCCATaGCAGACAGCAAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGQCGNDKMVAGMPEPGIHCGYP*QTAKHG Trigger: GCCGTGCTTTGCTGTCTGTCATGGATAACCACAATG...GATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACGGGAGGAGAGGGAGATaGAAGAGTCCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARPGEATAAVKPQLKTWHGRRGR*KSPHCG Trigger: ACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCC...GTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGAAAGCTGCTGGCATTaGGGTACAAGTCATCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTESCWH*GTSHRG Trigger: ACCACGATGACTTGTACCTCAATGCCAGCAGCTTTC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTAANSL*HRRDQA Trigger: TGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | GTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATGCCAGAGCCTGGCATCGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGQCGNDKMVAGMPEPGIAANSL*HRRDQA Trigger: TGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGC...GATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGATCGTGCCAGTAGTTaGAAATGGAAAATTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWDRASS*KWKIPG Trigger: GCCAGGAATTTTCCATTTGCAACTACTGGCACGATC...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGGATCGTGCCAGTAGTTaGAAATGGAAAATTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGDRASS*KWKIPG Trigger: GCCAGGAATTTTCCATTTGCAACTACTGGCACGATC...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGATCGTGCCAGTAGTTaGAAATGGAAAATTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGDRASS*KWKIPG Trigger: GCCAGGAATTTTCCATTTGCAACTACTGGCACGATC...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR GCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAAGAGCCACGGCTCAATaGAAGTATCGTAGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTRATAQ*KYRRAY Trigger: GTACGCTCTACGATACTTGCATTGAGCCGTGGCTCT...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCGCCAGTAGTTGCAAATaGAAAATTCCTGGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLLRYSQTRRSNSSGEAASSCK*KIPGPK Trigger: CTTGGGGCCAGGAATTTTCCATTTGCAACTACTGGC...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACATCTTCCGCCATGCAGTaGCATTGGGATGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTSSAMQ*HWDGLF Trigger: AAAGAGACCATCCCAATGCCACTGCATGGCGGAAGA...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSNSSGEATVKNLALASVAEAV*TVKEPV Trigger: CACGGGCTCTTTGACAGTTCATACAGCTTCCGCCAC...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACCATTGTGGTTATCCATaGCAGACAGCAAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGEATAAVKPQLKTWHHCGYP*QTAKHG Trigger: GCCGTGCTTTGCTGTCTGTCATGGATAACCACAATG...GTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTAAAGAGTCCACATTGTaGTTATCCATGACAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGKESTL*LSMTDS Trigger: GCTGTCTGTCATGGATAACCACAATGTGGACTCTTT...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGAAAGAGTCCACATTGTaGTTATCCATGACAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWKESTL*LSMTDS Trigger: GCTGTCTGTCATGGATAACCACAATGTGGACTCTTT...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCAATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTRRSNSSGEATVKNLAILAHL*GGEGDE Trigger: TTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTAT...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAGCCAGTAGTTGCAAATaGAAAATTCCTGGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTASSCK*KIPGPK Trigger: CTTGGGGCCAGGAATTTTCCATTTGCAACTACTGGC...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCGCCATGCAGTGGCATTaGGATGGTCTCTTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRSNSSGEATVKNLALASAMQWH*DGLFPH Trigger: ATGGGGAAAGAGACCATCCCAATGCCACTGCATGGC...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCATCTTCCGCCATGCAGTaGCATTGGGATGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRRSNSSGEATVKNLASSAMQ*HWDGLF Trigger: AAAGAGACCATCCCAATGCCACTGCATGGCGGAAGA...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGCCAGAACTGTCTCATTaGCATCATAGAAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QACQSLASASQGHRLISGPELSH*HHRNQR Trigger: TCTTTGGTTTCTATGATGCCAATGAGACAGTTCTGG...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGCCAGAACTGTCTCATTaGCATCATAGAAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGMPEPGICFPRPPLDLWPELSH*HHRNQR Trigger: TCTTTGGTTTCTATGATGCCAATGAGACAGTTCTGG...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCCATTGTGGTTATCCATaGCAGACAGCAAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSNSSGEATVKNLALASHCGYP*QTAKHG Trigger: GCCGTGCTTTGCTGTCTGTCATGGATAACCACAATG...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAAAAGAGTCCACATTGTaGTTATCCATGACAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTKESTL*LSMTDS Trigger: GCTGTCTGTCATGGATAACCACAATGTGGACTCTTT...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GTCGGGCAGTGTGGGAATGACAAGATGGTTGCAGGCATGCCAGAGCCTGGCATCAAAGAGTCCACATTGTaGTTATCCATGACAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGQCGNDKMVAGMPEPGIKESTL*LSMTDS Trigger: GCTGTCTGTCATGGATAACCACAATGTGGACTCTTT...GATGCCAGGCTCTGGCATGCCTGCAACCATCTTGTCATTCCCACACTGCCCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCCAGAACTGTCTCATTaGCATCATAGAAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGGSPNLRWALQATDIPPELSH*HHRNQR Trigger: TCTTTGGTTTCTATGATGCCAATGAGACAGTTCTGG...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAACGGGGATAACAGAAGCTAAAAATGTCCTGAGTGGCCTGGAAGAAGACGAGAGATGCCAGCCATaGGACACCTCACTATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RETGITEAKNVLSGLEEDERCQP*DTSLWP Trigger: GGGCCATAGTGAGGTGTCCCATGGCTGGCATCTCTC...GTCTTCTTCCAGGCCACTCAGGACATTTTTAGCTTCTGTTATCCCCGTTTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACACCAGAACTGTCTCATTaGCATCATAGAAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGHRLISGLGNSWRPLRTPELSH*HHRNQR Trigger: TCTTTGGTTTCTATGATGCCAATGAGACAGTTCTGG...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR GCA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCGATCGTGCCAGTAGTTaGAAATGGAAAATTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSNSSGEATVKNLALASDRASS*KWKIPG Trigger: GCCAGGAATTTTCCATTTGCAACTACTGGCACGATC...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAACGGGGATAACAGAAGCTAAAAATGTCCTGAGTGGCCTGGAAGAAGACGAAAGCTGCTGGCATTaGGGTACAAGTCATCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RETGITEAKNVLSGLEEDESCWH*GTSHRG Trigger: ACCACGATGACTTGTACCTCAATGCCAGCAGCTTTC...GTCTTCTTCCAGGCCACTCAGGACATTTTTAGCTTCTGTTATCCCCGTTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAACGGGGATAACAGAAGCTAAAAATGTCCTGAGTGGCCTGGAAGAAGACGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RETGITEAKNVLSGLEEDAANSL*HRRDQA Trigger: TGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGC...GTCTTCTTCCAGGCCACTCAGGACATTTTTAGCTTCTGTTATCCCCGTTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CCA 90 bp | AAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCAACACTGACACTTCAAAAAGAGTCCACATTGTaGTTATCCATGACAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPEMGLAGHRYSPTLTLQKESTL*LSMTDS Trigger: GCTGTCTGTCATGGATAACCACAATGTGGACTCTTT...TTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS GCA 90 bp | CACCACGATCACGGGCTTGTAGGACCCGCGGTGGGCTGCGGGGGCTaGGGGCATCAGCAGCGGCAGGAACGGCAGGAGAAGCAAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HHDHGLVGPAVGCGG*GHQQRQERQEKQSP Trigger: TGGGCTTTGCTTCTCCTGCCGTTCCTGCCGCTGCTGATGCCCGCAGCCCCCGCAGCCCACCGCGGGTCCTACAAGCCCGTGATCGTGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGAGCCTCTCGGAACCCTaGTACCTGTTCCCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGMPEPGICFPRPPLDLWSLSEP*YLFPQG Trigger: CCCCTGTGGGAACAGGTACAAGGGTTCCGAGAGGCT...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAAGCCTCTCGGAACCCTaGTACCTGTTCCCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGHRLISGLGNSWRPLRTSLSEP*YLFPQG Trigger: CCCCTGTGGGAACAGGTACAAGGGTTCCGAGAGGCT...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCCGCCATGCAGTGGCATaGGGATGGTCTCTTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WVLLRYSQTRRSNSSGEARHAVA*GWSLSP Trigger: TGGGGAAAGAGACCATCCCAATGCCACTGCATGGCG...GGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACACGCCATGCAGTGGCATaGGGATGGTCTCTTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGHRLISGLGNSWRPLRTRHAVA*GWSLSP Trigger: TGGGGAAAGAGACCATCCCAATGCCACTGCATGGCG...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS GCA 90 bp | CTCGGAACCCTTGTACCTGTTCCCACAGGGGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCACTGTCACCACAGTCCCGGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLVPVPTGAANSL*HRRDQALSPQSRCV Trigger: CACACACCGGGACTGTGGTGACAGTGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGCCCCTGTGGGAACAGGTACAAGGGTTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCAAGCCTCTCGGAACCCTaGTACCTGTTCCCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQTRRSNSSGEATVKNLASLSEP*YLFPQG Trigger: CCCCTGTGGGAACAGGTACAAGGGTTCCGAGAGGCT...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGMPEPGICFPRPPLDLWRKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...CCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | CAGGCATGCCAGAGCCTGGCATCTGCTTCCCAAGGCCACCGCTTGATCTCTGGGAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QACQSLASASQGHRLISGRKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...CCCAGAGATCAAGCGGTGGCCTTGGGAAGCAGATGCCAGGCTCTGGCATGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGGSPNLRWALQATDIPRKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...GGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGACCCGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACGCCATGCAGTGGCATaGGGATGGTCTCTTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTRRSNSSGEATVKNLARHAVA*GWSLSP Trigger: TGGGGAAAGAGACCATCCCAATGCCACTGCATGGCG...TGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCGGGTCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCCACCGCTTGATCTCTGGGCTGGGGAATTCCTGGAGACCACTGAGGACAAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGHRLISGLGNSWRPLRTRKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...TGTCCTCAGTGGTCTCCAGGAATTCCCCAGCCCAGAGATCAAGCGGTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000171121.9 ENSMUST00000171376.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGATCATAGGGACTGGGGGATCCCCAAACCTGAGATGGGCCTTGCAGGCCAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLIIGTGGSPNLRWALQARKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...GGCCTGCAAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCCTATGATCAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | CGGAGAAGCAACAGCAGCGGTGAAGCCACAGTTAAAAACCTGGCACTTGCTTCCCGCCATGCAGTGGCATaGGGATGGTCTCTTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RRSNSSGEATVKNLALASRHAVA*GWSLSP Trigger: TGGGGAAAGAGACCATCCCAATGCCACTGCATGGCG...GGAAGCAAGTGCCAGGTTTTTAACTGTGGCTTCACCGCTGCTGTTGCTTCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | AAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCAACACTGACACTTCAAAGCCTCTCGGAACCCTaGTACCTGTTCCCACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: KPEMGLAGHRYSPTLTLQSLSEP*YLFPQG Trigger: CCCCTGTGGGAACAGGTACAAGGGTTCCGAGAGGCT...TTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGGGTTCTCCTCCGATACAGCCAGACCCGGAGAAGCAACAGCAGCGGTATGAAAGAGTCCACATaGTGGTTATCCATGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: RGWVLLRYSQTRRSNSSGMKEST*WLSMTD Trigger: GTCTGTCATGGATAACCACAATGTGGACTCTTTCAT...ACCGCTGCTGTTGCTTCTCCGGGTCTGGCTGTATCGGAGGAGAACCCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS TCA 90 bp | GGTGTGTGTCTCATTGATATAGTCCAGCAGGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTGCACCACGATCACGGGCTTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: GVCLIDIVQQVAEAV*TVKEPVHHDHGLVG Trigger: TCCTACAAGCCCGTGATCGTGGTGCACGGGCTCTTTGACAGTTCATACAGCTTCCGCCACCTGCTGGACTATATCAATGAGACACACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS-3UTR CAA 90 bp | AAACCTGAGATGGGCCTTGCAGGCCACAGATATTCCCCAACACTGACACTTCAAAGAAAGCTGCTGGCATaGAGGTACAAGTCATCGTGG | + |
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Preference number: 5 (lower is better) Translates to: KPEMGLAGHRYSPTLTLQRKLLA*RYKSSW Trigger: CCACGATGACTTGTACCTCAATGCCAGCAGCTTTCT...TTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGCAAGGCCCATCTCAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064953.15 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CCA 90 bp | GAAGAGCCATTTCAAATAGTCCGTGTCTCCATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAAAGAGTCCACATTGTGGTTATCCAT | + |
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Preference number: 5 (lower is better) Translates to: EEPFQIVRVSILAHL*GGEGDERVHIVVIH Trigger: ATGGATAACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTATGGAGACACGGACTATTTGAAATGGCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS GCA 72 bp | CACGGGCTTGTAGGACCCGCGGTGGGCTGCGGGGGCTaGGGGCATCAGCAGCGGCAGGAACGGCAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HGLVGPAVGCGG*GHQQRQERQEK Trigger: CTTCTCCTGCCGTTCCTGCCGCTGCTGATGCCCGCAGCCCCCGCAGCCCACCGCGGGTCCTACAAGCCCGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CAA 90 bp | TACTGGCCCATCTGTGGGGAGGAGAGGGAGATGAAAGAGTCCACATaGTGGTTATCCATGACAGACAGCAAAGCACGGCACACCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: YWPICGEEREMKEST*WLSMTDSKARHTRP Trigger: GGGCCTGGTGTGCCGTGCTTTGCTGTCTGTCATGGATAACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS GCA 72 bp | CTTGTACCTGTTCCCACAGGGGCCGCAAACTCTCTCTaGCATCGAAGAGATCAAGCACTGTCACCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LVPVPTGAANSL*HRRDQALSPQS Trigger: GGACTGTGGTGACAGTGCTTGATCTCTTCGATGGCAGAGAGAGTTTGCGGCCCCTGTGGGAACAGGTACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS TCA 72 bp | CTCATTGATATAGTCCAGCAGGTGGCGGAAGCTGTATaGACTGTCAAAGAGCCCGTGCACCACGATCACGGG | + |
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Preference number: 6 (lower is better) Translates to: LIDIVQQVAEAV*TVKEPVHHDHG Trigger: CCCGTGATCGTGGTGCACGGGCTCTTTGACAGTTCATACAGCTTCCGCCACCTGCTGGACTATATCAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169287.2 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CCA 72 bp | GTCATCGTGGTGAGGATCTCCATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAAAGAGTCCACATTGTG | + |
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Preference number: 6 (lower is better) Translates to: VIVVRISILAHL*GGEGDERVHIV Trigger: CACAATGTGGACTCTTTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTATGGAGATCCTCACCACGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169969.8 |
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| CDS CCA 72 bp | TGTGGGGAGGAGAGGGAGATGAAAGAGTCCACATTGTaGTTATCCATGACAGACAGCAAAGCACGGCACACC | + |
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Preference number: 6 (lower is better) Translates to: CGEEREMKESTL*LSMTDSKARHT Trigger: GGTGTGCCGTGCTTTGCTGTCTGTCATGGATAACCACAATGTGGACTCTTTCATCTCCCTCTCCTCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169969.8 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CAA 90 bp | AAGTTCTTCCGCCATGCAGTGGCATTGGGATGGTCTCTTTCCCCATaGATGAGGGCCAGAAAGCTGCTGGCATTGAGGTACAAGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: KFFRHAVALGWSLSP*MRARKLLALRYKSS Trigger: CGATGACTTGTACCTCAATGCCAGCAGCTTTCTGGCCCTCATCAATGGGGAAAGAGACCATCCCAATGCCACTGCATGGCGGAAGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000169969.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CCA 72 bp | AGTCATCGTGGTGAGGATCGTGCCAGTAGTTGCAAATaGAAAATTCCTGGCCCCAAGGACTATAGCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: SHRGEDRASSCK*KIPGPKDYSRP Trigger: GGGTCTGCTATAGTCCTTGGGGCCAGGAATTTTCCATTTGCAACTACTGGCACGATCCTCACCACGATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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| CDS CCA 72 bp | TTTCAAATAGTCCGTGTCTCCATACTGGCCCATCTGTaGGGAGGAGAGGGAGATGAAAGAGTCCACATTGTG | + |
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Preference number: 6 (lower is better) Translates to: FQIVRVSILAHL*GGEGDERVHIV Trigger: CACAATGTGGACTCTTTCATCTCCCTCTCCTCCCCACAGATGGGCCAGTATGGAGACACGGACTATTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000064953.15 ENSMUST00000166040.9 ENSMUST00000167097.9 ENSMUST00000168391.9 ENSMUST00000169067.9 ENSMUST00000170345.8 ENSMUST00000171121.9 ENSMUST00000171376.8 |
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