Pregenerated sensors for PPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028657Ensembl transcript IDs: ENSMUST00000030412.11, ENSMUST00000097902.5, ENSMUST00000120157.2, ENSMUST00000121870.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACTAGAGTTATGAACTGTGGTGATACCCCTAGCAGCCGCTCCTaGAGTCAGAGAGCACACATGCTAGCAGGGCACTCCCACAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: ETRVMNCGDTPSSRS*SQRAHMLAGHSHSL Trigger: CAGACTGTGGGAGTGCCCTGCTAGCATGTGTGCTCTCTGACTCCAGGAGCGGCTGCTAGGGGTATCACCACAGTTCATAACTCTAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR CCA 90 bp | CAAAGACACCTTGATGTTGTCCTCCAACTGAGATCAGGGTCATCATaGGAGGTGTTGGGCATCTCTGAGCCACTGCCCTCAGGAACTGGC | + |
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Preference number: 1 (lower is better) Translates to: QRHLDVVLQLRSGSS*EVLGISEPLPSGTG Trigger: GCCAGTTCCTGAGGGCAGTGGCTCAGAGATGCCCAACACCTCCCATGATGACCCTGATCTCAGTTGGAGGACAACATCAAGGTGTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR GCA 90 bp | GTAGTTTCGGTACACACTCTCCTTGATAGGGTCATGCCAGTACTGTaGTTGCACCAGGCGTTCTTGCACAAGTTTGGAGTAAGCACCGGC | + |
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Preference number: 1 (lower is better) Translates to: VVSVHTLLDRVMPVL*LHQAFLHKFGVSTG Trigger: GCCGGTGCTTACTCCAAACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTGTACCGAAACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR TCA 90 bp | CACCAGGCGTTCTTGCACAAGTTTGGAGTAAGCACCGGCATTAAGTaGCTTCCTGATGAAGTCGCAGATGTGAGAACTCTCTCCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: HQAFLHKFGVSTGIK*LPDEVADVRTLSWA Trigger: TGCCCAGGAGAGAGTTCTCACATCTGCGACTTCATCAGGAAGTCACTTAATGCCGGTGCTTACTCCAAACTTGTGCAAGAACGCCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR CCA 90 bp | AGTTCAGGGCTGAGCATGAACTATGTACATGGCTTGGAAGAGCTGTaGTTTCATGAACTCTGCTATAAAGTGCCAGGGCTTCACTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSGLSMNYVHGLEEL*FHELCYKVPGLHLR Trigger: TCTTAAGTGAAGCCCTGGCACTTTATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCCATGTACATAGTTCATGCTCAGCCCTGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR GCA 90 bp | CACTTACACAGGAAAACAGTCTTAAGAAATGATGGGGAAACATCATaGACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACAT | + |
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Preference number: 1 (lower is better) Translates to: HLHRKTVLRNDGETS*TAHTAVQRNCLCEH Trigger: ATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGTTTCCCCATCATTTCTTAAGACTGTTTTCCTGTGTAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR GCA 90 bp | GTTCTTCTTGTAGGACTCATTGACACACCTCTCTTGATTTATGTCTaGCAAGAAGATGCTGTAGTTTCGGTACACACTCTCCTTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: VLLVGLIDTPLLIYV*QEDAVVSVHTLLDR Trigger: CCTATCAAGGAGAGTGTGTACCGAAACTACAGCATCTTCTTGGCAGACATAAATCAAGAGAGGTGTGTCAATGAGTCCTACAAGAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR TCA 90 bp | ATAGCATTGTATCCCTGCTGCAACTTAGGATCCTTTTCCAGAATCTaGCACACCATGTTGACTTGGACATTAACATTCAAGAAGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IALYPCCNLGSFSRI*HTMLTWTLTFKKKL Trigger: CAGCTTCTTCTTGAATGTTAATGTCCAAGTCAACATGGTGTGTCAGATTCTGGAAAAGGATCCTAAGTTGCAGCAGGGATACAATGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR TCA 90 bp | TTAAGAAAAGGTATGATGTGGGCAGTAAACCATTCTTTAGATATTTaGAGATGGTCCCCTTCCTTAGCCAGAAACACTAGCTTTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LRKGMMWAVNHSLDI*RWSPSLARNTSFPA Trigger: AGCAGGAAAGCTAGTGTTTCTGGCTAAGGAAGGGGACCATCTTCAAATATCTAAAGAATGGTTTACTGCCCACATCATACCTTTTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR CCA 90 bp | TGCCAAAGCCCCACCTTTTTAGACTATTTCTCCCGTTCTTTGCAATaGTGTGACATTTATGCCACTTATAATATTAAGGGCAAGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: CQSPTFLDYFSRSLQ*CDIYATYNIKGKNR Trigger: TCTGTTCTTGCCCTTAATATTATAAGTGGCATAAATGTCACACCATTGCAAAGAACGGGAGAAATAGTCTAAAAAGGTGGGGCTTTGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | GACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTTGCAGGCAATGCTCCTaGAGGCCAGAGGATCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: DYMLVCVPERARSYGAGGCRQCS*RPEDPE Trigger: CTCGGGATCCTCTGGCCTCCAGGAGCATTGCCTGCA...ACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR-3UTR GCA 90 bp | GACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTACCATGTGCAGGCAATaGTCCTGGAGGCCAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: DYMLVCVPERARSYGAGGTMCRQ*SWRPED Trigger: ATCCTCTGGCCTCCAGGAGCATTGCCTGCACATGGT...ACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGATAGGGTCATGCCAGTACTGTGCTTGCACCAGGCGTTCTTGCACAAGTACTGCCCTCAGGAACTaGCCTCCCTGGGAGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SLIGSCQYCACTRRSCTSTALRN*PPWEKP Trigger: TGGCTTCTCCCAGGGAGGCCAGTTCCTGAGGGCAGT...ACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGCAGAGGGGGCAGGTGATCTCTGTGACTGTGAGTTCAAGACCAGTCTGCCGGCCCACACAGCAGTaGAGAGAAATTGCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ERQRGQVISVTVSSRPVCRPTQQ*REIACV Trigger: CACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCG...GCAGACTGGTCTTGAACTCACAGTCACAGAGATCACCTGCCCCCTCTGCCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTACAGATAGTTCCTAGCAGCCGCTCCTaGAGTCAGAGAGCACACATG | + |
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Preference number: 2 (lower is better) Translates to: LSVSLREPGPMELEVQIVPSSRS*SQRAHM Trigger: CATGTGTGCTCTCTGACTCCAGGAGCGGCTGCTAGG...AACTATCTGTACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR-3UTR TCA 90 bp | GACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTCCGAGACTAGAGTTATaGACTGTGGTGATACCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DYMLVCVPERARSYGAGGPRLEL*TVVIPL Trigger: TAGGGGTATCACCACAGTTCATAACTCTAGTCTCGG...ACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTACAGATAGTTGAGCTGCTATGTAGGTaGTGGCAATTGAGCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LSVSLREPGPMELEVQIVELLCR*WQLSPG Trigger: ACCAGGGCTCAATTGCCAGCACCTACATAGCAGCTC...AACTATCTGTACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
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| 3UTR CAA 90 bp | GTTTCGGTACACACTCTCCTTGATAGGGTCATGCCAGTACTGTGCTaGCACCAGGCGTTCTTGCACAAGTTTGGAGTAAGCACCGGCATT | + |
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Preference number: 2 (lower is better) Translates to: VSVHTLLDRVMPVLC*HQAFLHKFGVSTGI Trigger: AATGCCGGTGCTTACTCCAAACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTGTACCGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTGCATCTCTGAGCCACTaGCCTCAGGAACTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RKEKEKQAVGEFCGANGAASLSH*PQELAS Trigger: GGAGGCCAGTTCCTGAGGGCAGTGGCTCAGAGATGC...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCAGACCTAGAGGAGAGAAGGGCTaGTTGCAGGCTAGATTAGAG | + |
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Preference number: 2 (lower is better) Translates to: CTAHTAVQRNCLCEHLRPRGEKG*LQARLE Trigger: CTCTAATCTAGCCTGCAACCAGCCCTTCTCTCCTCT...AGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCGGTACACACTCTCCTTGATAGGGTCATGCCAGTACTGTGCTTGCACCAGGAGAGGAGAGAAGGGCTaGTTGCAGGCTAGATTAGAG | + |
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Preference number: 2 (lower is better) Translates to: FRYTLSLIGSCQYCACTRRGEKG*LQARLE Trigger: CTCTAATCTAGCCTGCAACCAGCCCTTCTCTCCTCT...CCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTGTACCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCAGACCTAGATCAGGGTCATCATaGGAGGTGTTGGGCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CTAHTAVQRNCLCEHLRPRSGSS*EVLGIS Trigger: AGAGATGCCCAACACCTCCCATGATGACCCTGATCT...AGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGGAGAAATTGCTTGTGTaGACATCTCAGACCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CMPLIPVLERQRGQVISVEKLLV*TSQTWA Trigger: AGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTC...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTATCTCATAGTATATAAGACACACATTGCTGTAGGCTGTGGTGATGCAGGTGTTGGGCATCTCTaGGCCACTGCCCTCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PHYLIVYKTHIAVGCGDAGVGHL*ATALRN Trigger: GTTCCTGAGGGCAGTGGCTCAGAGATGCCCAACACC...TGCATCACCACAGCCTACAGCAATGTGTGTCTTATATACTATGAGATAGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGATAGGGTCATGCCAGTACTGTGCTTGCACCAGGCGTTCTTGCACAAGTAGTCCAAAGACACCTTaGTGTTGTCCTCCAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLIGSCQYCACTRRSCTSSPKTP*CCPPTE Trigger: CTCAGTTGGAGGACAACATCAAGGTGTCTTTGGACT...ACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | GACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTAGGCAGGTGGATATCTaGGTTCCAGGCCAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DLGFYLLQICMGFALRACRQVDI*VPGQSG Trigger: ACCAGACTGGCCTGGAACTCAGATATCCACCTGCCT...ACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAACTTCTTGAGGGCCATCAGGTTCTTCTTGTAGGACTCATTGACACACCTTGCCAGTACTGTGCTTaGACCAGGCGTTCTTGCACA | + |
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Preference number: 2 (lower is better) Translates to: HKLLEGHQVLLVGLIDTPCQYCA*TRRSCT Trigger: TGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCA...AGGTGTGTCAATGAGTCCTACAAGAAGAACCTGATGGCCCTCAAGAAGTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR CAA 90 bp | GGGGAAACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTaGTGTGAACATCTCAGACCTGGGCTTTTATTTGCTCCAAATTTG | + |
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Preference number: 2 (lower is better) Translates to: GETSCTAHTAVQRNC*CEHLRPGLLFAPNL Trigger: CAAATTTGGAGCAAATAAAAGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGTGGTTTCATGAACTCTaGTATAAAGTGCCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: CMPLIPVLERQRGQVISVWFHEL*YKVPGL Trigger: AAGCCCTGGCACTTTATAGCAGAGTTCATGAAACCA...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGGAGGCAGAGGCAGGTaGATATCTGAGTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLQICMGFALRACLFFTSGGRGR*ISEFQA Trigger: GGCCTGGAACTCAGATATCCACCTGCCTCTGCCTCC...AGAAGTGAAAAAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTCTCTTATACAAGGTGAGCTCTaGAGGGGACGTGATGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GLLFAPNLYGFCPQSLSLIQGEL*RGRDGR Trigger: CCTACCATCACGTCCCCTTCAGAGCTCACCTTGTAT...AAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | AAACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCCTTTTCCAGAATCTaGCACACCATGTTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: KHHARPTQQCREIACVNISFSRI*HTMLTW Trigger: CCAAGTCAACATGGTGTGTCAGATTCTGGAAAAGGA...GATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGGCACAATTACTGATCTaGAACAACAGACTCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: CMPLIPVLERQRGQVISVAQLLI*NNRLPF Trigger: AAATGGGAGTCTGTTGTTGCAGATCAGTAATTGTGC...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCAGACCTATAGCATTGTATCCCTaGTGCAACTTAGGATCCTTT | + |
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Preference number: 2 (lower is better) Translates to: CTAHTAVQRNCLCEHLRPIALYP*CNLGSF Trigger: AAAGGATCCTAAGTTGCAGCAGGGATACAATGCTAT...AGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGGCTTGGAAGAGCTGTGGTTTCATGAACTCTGCTATAAAGTGCCAGGGCTATAGAGTGCTCTCCTaGAGGGGAATGGTTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: YMAWKSCGFMNSAIKCQGYRVLS*RGMVSL Trigger: TAAGGAAACCATTCCCCTCCAGGAGAGCACTCTATA...GCCCTGGCACTTTATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGACCTGGGCTTTTATTTaGTCCAAATTTGTATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CMPLIPVLERQRGQVISVTWAFI*SKFVWV Trigger: AACCCATACAAATTTGGAGCAAATAAAAGCCCAGGT...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTTTAGACTATTTCTCCCGTTCTTTGCAATGGTGTGACATTTATGCCACTCGGCCCACACAGCAGTaGAGAGAAATTGCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TFLDYFSRSLQWCDIYATRPTQQ*REIACV Trigger: CACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCG...AGTGGCATAAATGTCACACCATTGCAAAGAACGGGAGAAATAGTCTAAAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTTGGCTTGGAAGAGCTGTaGTTTCATGAACTCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ERKRKNRQWVNSVVLMVLGLEEL*FHELCY Trigger: ATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCC...AAGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGAGAAAAGGTATGATGTaGGCAGTAAACCATTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: CMPLIPVLERQRGQVISVRKGMM*AVNHSL Trigger: TAAAGAATGGTTTACTGCCCACATCATACCTTTTCT...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTGAGAAATTGCTTGTGTaGACATCTCAGACCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSELVSFSLLSLLGTITEKLLV*TSQTWA Trigger: AGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTC...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAACTTCTTGAGGGCCATCAGGTTCTTCTTGTAGGACTCATTGACACACCTAACAGTCTTAAGAAATaGTGGGGAAACATCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: HKLLEGHQVLLVGLIDTPNSLKK*WGNIMH Trigger: GTGCATGATGTTTCCCCATCATTTCTTAAGACTGTT...AGGTGTGTCAATGAGTCCTACAAGAAGAACCTGATGGCCCTCAAGAAGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATAATATTAAGGGCAAGAACAGACACCTGGTTTTCACTTCTATACTCCCTCTGCTGTAGGCTGTGGTaGTGCATGCCTTTAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: LIILRARTDTWFSLLYSLCCRLW*CMPLIP Trigger: AGGGATTAAAGGCATGCATCACCACAGCCTACAGCA...GAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGCCCTTAATATTATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTAAATCAGCAGCAGTTTaGTGTATGCTGGTAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: RKEKEKQAVGEFCGANGAKSAAV*CMLVNR Trigger: CCTATTTACCAGCATACATCAAACTGCTGCTGATTT...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTAATTTGTATGGGTTTTaGCCTCAGAGCTTGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RKEKEKQAVGEFCGANGANLYGF*PQSLSL Trigger: AAGAGACAAGCTCTGAGGGCAAAACCCATACAAATT...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGGCTTGGAAGAGCTGTaGTTTCATGAACTCTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LLQICMGFALRACLFFTSGLEEL*FHELCY Trigger: ATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCC...AGAAGTGAAAAAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTATAATATTAAGGGCAAGAACAGACACCTGGTTTTCACTTCTATACTCCCTCTGTCTGCCAAGAAGATaGTGTAGTTTCGGTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: LIILRARTDTWFSLLYSLCLPRR*CSFGTH Trigger: GTGTGTACCGAAACTACAGCATCTTCTTGGCAGACA...GAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGCCCTTAATATTATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTATAATATTAAGGGCAAGAACAGACACCTGGTTTTCACTTCTATACTCCCTCAGGAAAAACAGGCAGTaGGTGAATTCTGTGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LIILRARTDTWFSLLYSLRKNRQ*VNSVVL Trigger: TAGCACCACAGAATTCACCCACTGCCTGTTTTTCCT...GAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGCCCTTAATATTATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGATCTGCAACAACAGACTCCCATTTCTTAAACGGGAGCTTGACCATATCACACACACCATGTTGACTTaGACATTAACATTCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LICNNRLPFLKRELDHITHTMLT*TLTFKK Trigger: CTTCTTGAATGTTAATGTCCAAGTCAACATGGTGTG...TGTGATATGGTCAAGCTCCCGTTTAAGAAATGGGAGTCTGTTGTTGCAGATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTTCTTGTAGGACTCATTaGCACACCTCTCTTGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: LPSELVSFSLLSLLGTITSCRTH*HTSLDL Trigger: TAAATCAAGAGAGGTGTGTCAATGAGTCCTACAAGA...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACAATCTCAAAACTATTTTTAGATCCTCCCACTTCCTGCCCTTAACCCTCGCACAATTACTGATCTaGAACAACAGACTCCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: KDNLKTIFRSSHFLPLTLAQLLI*NNRLPF Trigger: AAATGGGAGTCTGTTGTTGCAGATCAGTAATTGTGC...GAGGGTTAAGGGCAGGAAGTGGGAGGATCTAAAAATAGTTTTGAGATTGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTAATTTGTATGGGTTTTaGCCTCAGAGCTTGTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LPSELVSFSLLSLLGTITNLYGF*PQSLSL Trigger: AAGAGACAAGCTCTGAGGGCAAAACCCATACAAATT...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTATAATATTAAGGGCAAGAACAGACACCTGGTTTTCACTTCTATACTCCCTCTGCTCCAAATTTGTATaGGTTTTGCCCTCAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LIILRARTDTWFSLLYSLCSKFV*VLPSEL Trigger: AAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCA...GAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGCCCTTAATATTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTCTCTTGATTTATGTCTaGCAAGAAGATGCTGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPSELVSFSLLSLLGTITLLIYV*QEDAVV Trigger: AACTACAGCATCTTCTTGGCAGACATAAATCAAGAG...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCAGGGTGGTTTCTTCTTTAACAATCAAAGTTATCATCTGTTTAATAGGAGCAAGAACAGACACCTaGTTTTCACTTCTATACTCC | + |
|
Preference number: 2 (lower is better) Translates to: GIRVVSSLTIKVIICLIGARTDT*FSLLYS Trigger: GGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGC...TCCTATTAAACAGATGATAACTTTGATTGTTAAAGAAGAAACCACCCTGATCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTTTGCAATGGTGTGACATTTATGCCACTTATAATATTAAGGGCAAGAACAAACAGTCTTAAGAAATaGTGGGGAAACATCATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLCNGVTFMPLIILRARTNSLKK*WGNIMH Trigger: GTGCATGATGTTTCCCCATCATTTCTTAAGACTGTT...TGTTCTTGCCCTTAATATTATAAGTGGCATAAATGTCACACCATTGCAAAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR CCA 72 bp | AGCCCCAGGCGGTCCTCTGTGTATAGAGTGCTCTCCTaGAGGGGAATGGTTTCCTTAGCTTGGCCACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPRRSSVYRVLS*RGMVSLAWPLL Trigger: CAGAAGTGGCCAAGCTAAGGAAACCATTCCCCTCCAGGAGAGCACTCTATACACAGAGGACCGCCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR CCA 72 bp | GTTATGAACTGTGGTGATACCCCTAGCAGCCGCTCCTaGAGTCAGAGAGCACACATGCTAGCAGGGCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VMNCGDTPSSRS*SQRAHMLAGHS Trigger: GGAGTGCCCTGCTAGCATGTGTGCTCTCTGACTCCAGGAGCGGCTGCTAGGGGTATCACCACAGTTCATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| 3UTR GCA 72 bp | GCTGGAGGTACAGATAGTTGTGAGCTGCTATGTAGGTaGTGGCAATTGAGCCCTGGTCCTCTGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: AGGTDSCELLCR*WQLSPGPLEEQ Trigger: CTGTTCTTCCAGAGGACCAGGGCTCAATTGCCAGCACCTACATAGCAGCTCACAACTATCTGTACCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| 3UTR CCA 72 bp | CTTCCTGATGAAGTCGCAGATGTGAGAACTCTCTCCTaGGCATCGGGGGAGTCCAAAGACACCTTGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPDEVADVRTLS*ASGESKDTLML Trigger: CAACATCAAGGTGTCTTTGGACTCCCCCGATGCCCAGGAGAGAGTTCTCACATCTGCGACTTCATCAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTAGCCCCAGGCGGTCCTCTGTGTATAGAGTGCTCTCCTGGAGGGGAATGGACCTGGGCTTTTATTaGCTCCAAATTTGTATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FFSPRRSSVYRVLSWRGMDLGFY*LQICMG Trigger: ACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTC...CATTCCCCTCCAGGAGAGCACTCTATACACAGAGGACCGCCTGGGGCTAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACAAGAGGCCATCTCCCTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTTGCAGGCACACAGGTTaGCAGTTAGCTAACAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TQEAISLYFPCLKVTPDPCRHTG*QLANSF Trigger: GAAGCTGTTAGCTAACTGCAAACCTGTGTGCCTGCA...AGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAGGGAGATGGCCTCTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| 3UTR GCA 72 bp | GTACACACTCTCCTTGATAGGGTCATGCCAGTACTGTaGTTGCACCAGGCGTTCTTGCACAAGTTTGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VHTLLDRVMPVL*LHQAFLHKFGV Trigger: TACTCCAAACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | CACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTaGACATCTCAGACCTGGGCTTTTATTTGCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HGPHSSAEKLLV*TSQTWAFICSK Trigger: TTTGGAGCAAATAAAAGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCAAATTTGTATGGGTTTaGCCCTCAGAGCTTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSCTAHTAVQRNCLCEHLKFVWV*PSELVS Trigger: AGAGACAAGCTCTGAGGGCAAAACCCATACAAATTT...GAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGCCCTCATCCTTTTATTaGAGTAGGTTTGAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CMPLIPVLERQRGQVISVPSSFY*SRFEKG Trigger: TCCTTTCTCAAACCTACTCAAATAAAAGGATGAGGG...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | AGGGCAACACTTACACAGGAAAACAGTCTTAAGAAATaGTGGGGAAACATCATGCACGGCCCACACAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RATLTQENSLKK*WGNIMHGPHSS Trigger: ACTGCTGTGTGGGCCGTGCATGATGTTTCCCCATCATTTCTTAAGACTGTTTTCCTGTGTAAGTGTTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | ATGCTTCGCAGATCCTTCCTGGTTGGCATCTGTTCTTaGCGTGTAACACGAATGCACGGCAGTATGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: MLRRSFLVGICS*RVTRMHGSMHF Trigger: AAAATGCATACTGCCGTGCATTCGTGTTACACGTCAAGAACAGATGCCAACCAGGAAGGATCTGCGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| 3UTR GCA 72 bp | ACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTaGTTGTGTGAACATCTCAGACCTGGGCTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TSCTAHTAVQRN*LCEHLRPGLLF Trigger: AAATAAAAGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATGGCTTGGAAGAGCTGTGGTTTCATGAACTCTGCTATAAAGTGCCAGGGCAACTATGTACATGGCTaGGAAGAGCTGTGGTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YMAWKSCGFMNSAIKCQGNYVHG*EELWFH Trigger: ATGAAACCACAGCTCTTCCAAGCCATGTACATAGTT...GCCCTGGCACTTTATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCCATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | CAGTGGGTGAATTCTGTGGTGCTAATGGTGCTTTCATaGAAACAGTCATTTCTCCAAACCCGTGCTCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QWVNSVVLMVLS*KQSFLQTRALE Trigger: CTCTAGAGCACGGGTTTGGAGAAATGACTGTTTTCATGAAAGCACCATTAGCACCACAGAATTCACCCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | TTCTTGCACAAGTTTGGAGTAAGCACCGGCATTAAGTaGCTTCCTGATGAAGTCGCAGATGTGAGAACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLHKFGVSTGIK*LPDEVADVRTL Trigger: GAGAGTTCTCACATCTGCGACTTCATCAGGAAGTCACTTAATGCCGGTGCTTACTCCAAACTTGTGCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR CCA 72 bp | ATGGGCACTAGGGAGTCCATGCTCAACTGTAGGAAATaGGGGATCAGGGTGGTTTCTTCTTTAACAATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: MGTRESMLNCRK*GIRVVSSLTIK Trigger: TTTGATTGTTAAAGAAGAAACCACCCTGATCCCCCATTTCCTACAGTTGAGCATGGACTCCCTAGTGCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTTATTTGCTCCAAATTaGTATGGGTTTTGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KHHARPTQQCREIACVNILFAPN*YGFCPQ Trigger: CTGAGGGCAAAACCCATACAAATTTGGAGCAAATAA...GATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTGTGCAGAGAAATTGCTaGTGTGAACATCTCAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: RKEKEKQAVGEFCGANGAVQRNC*CEHLRP Trigger: AGGTCTGAGATGTTCACACAAGCAATTTCTCTGCAC...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR GCA 72 bp | GTAGGACTCATTGACACACCTCTCTTGATTTATGTCTaGCAAGAAGATGCTGTAGTTTCGGTACACACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VGLIDTPLLIYV*QEDAVVSVHTL Trigger: GAGAGTGTGTACCGAAACTACAGCATCTTCTTGGCAGACATAAATCAAGAGAGGTGTGTCAATGAGTCCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR GCA 72 bp | GTACATGGCTTGGAAGAGCTGTGGTTTCATGAACTCTaGTATAAAGTGCCAGGGCTTCACTTAAGAAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VHGLEELWFHEL*YKVPGLHLRKG Trigger: ACCTTTTCTTAAGTGAAGCCCTGGCACTTTATAGCAGAGTTCATGAAACCACAGCTCTTCCAAGCCATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCAGACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAACTATGTACATGGCTaGGAAGAGCTGTGGTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLRPGLLFAPNLYGFCPQNYVHG*EELWFH Trigger: ATGAAACCACAGCTCTTCCAAGCCATGTACATAGTT...CTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTCTGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | GGTATGATGTGGGCAGTAAACCATTCTTTAGATATTTaGAGATGGTCCCCTTCCTTAGCCAGAAACACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GMMWAVNHSLDI*RWSPSLARNTS Trigger: GCTAGTGTTTCTGGCTAAGGAAGGGGACCATCTTCAAATATCTAAAGAATGGTTTACTGCCCACATCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAATATTCCCCAATCATTTTCTTGAGGAATCAAATCAGCAGCAGTTTGATCGGTACACACTCTCCTaGATAGGGTCATGCCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: STIFPNHFLEESNQQQFDRYTLS*IGSCQY Trigger: GTACTGGCATGACCCTATCAAGGAGAGTGTGTACCG...ATCAAACTGCTGCTGATTTGATTCCTCAAGAAAATGATTGGGGAATATTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACAATCTCAAAACTATTTTTAGATCCTCCCACTTCCTGCCCTTAACCCTCTTATTTGCTCCAAATTaGTATGGGTTTTGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KDNLKTIFRSSHFLPLTLLFAPN*YGFCPQ Trigger: CTGAGGGCAAAACCCATACAAATTTGGAGCAAATAA...GAGGGTTAAGGGCAGGAAGTGGGAGGATCTAAAAATAGTTTTGAGATTGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR TCA 72 bp | CTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTaGTCTGCAACAACAGACTCCCATTTCTTAAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFFTSVSFRHNY*SATTDSHFLNG Trigger: CCCGTTTAAGAAATGGGAGTCTGTTGTTGCAGATCAGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAATATTCCCCAATCATTTTCTTGAGGAATCAAATCAGCAGCAGTTTGATGTGCAGAGAAATTGCTaGTGTGAACATCTCAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: STIFPNHFLEESNQQQFDVQRNC*CEHLRP Trigger: AGGTCTGAGATGTTCACACAAGCAATTTCTCTGCAC...ATCAAACTGCTGCTGATTTGATTCCTCAAGAAAATGATTGGGGAATATTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTATAATATTAAGGGCAAGAACAGACACCTGGTTTTCACTTCTATACTCCCTCCCCTCATCCTTTTATTaGAGTAGGTTTGAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LIILRARTDTWFSLLYSLPSSFY*SRFEKG Trigger: TCCTTTCTCAAACCTACTCAAATAAAAGGATGAGGG...GAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTCTTGCCCTTAATATTATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| CDS-3UTR GCA 90 bp | GCTCATGGGGTTACAACAGCTGTCCCCTTTAGTCCCAGCACTCAGGAGGCAGAGGAAGGTGGGTCCAGATaGCCCAGGGCCCAGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHGVTTAVPFSPSTQEAEEGGSR*PRAQAA Trigger: CGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTC...CTCTGCCTCCTGAGTGCTGGGACTAAAGGGGACAGCTGTTGTAACCCCATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTGACCCTGATCCCCCGTTGGTCCTTGGTGCAGGCACACAGGTTTGCAGTTGCATCTCTGAGCCACTaGCCTCAGGAACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTLIPRWSLVQAHRFAVASLSH*PQELAS Trigger: GGAGGCCAGTTCCTGAGGGCAGTGGCTCAGAGATGC...AACTGCAAACCTGTGTGCCTGCACCAAGGACCAACGGGGGATCAGGGTCAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | CACTGGTGTTTTGACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGAAGGTGGGTCCAGATaGCCCAGGGCCCAGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HWCFDYMLVCVPERARSYEGGSR*PRAQAA Trigger: CGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTC...ATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTCAAAACACCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGGTACACACTCTCCTTGATAGGGTCATGCCAGTACTGTGCTTGCACCAGGCACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRYTLSLIGSCQYCACTRHQRWW*RWVQMP Trigger: GGGCATCTGGACCCACCTTCACCACCACCGCTGGTG...CCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTGTACCGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| CDS-3UTR TCA 90 bp | TTTGACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGACACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FDYMLVCVPERARSYGAGHQRWW*RWVQMP Trigger: GGGCATCTGGACCCACCTTCACCACCACCGCTGGTG...TCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGACCCTGATCCCCCGTTGGTCCTTGGTGCAGGCACACAGGTTTGCAGTTAGATCAGGGTCATCATaGGAGGTGTTGGGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTLIPRWSLVQAHRFAVRSGSS*EVLGIS Trigger: AGAGATGCCCAACACCTCCCATGATGACCCTGATCT...AACTGCAAACCTGTGTGCCTGCACCAAGGACCAACGGGGGATCAGGGTCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTACAGATAGTTGGTGTTGGGCATCTCTaGGCCACTGCCCTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSLREPGPMELEVQIVGVGHL*ATALRN Trigger: GTTCCTGAGGGCAGTGGCTCAGAGATGCCCAACACC...AACTATCTGTACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGACCCTGATCCCCCGTTGGTCCTTGGTGCAGGCACACAGGTTTGCAGTTAGTCCAAAGACACCTTaGTGTTGTCCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTLIPRWSLVQAHRFAVSPKTP*CCPPTE Trigger: CTCAGTTGGAGGACAACATCAAGGTGTCTTTGGACT...AACTGCAAACCTGTGTGCCTGCACCAAGGACCAACGGGGGATCAGGGTCAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | CTGATCTGCAACAACAGACTCCCATTTCTTAAACGGGAGCTTGACCATATCACAGAAGGTGGGTCCAGATaGCCCAGGGCCCAGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LICNNRLPFLKRELDHITEGGSR*PRAQAA Trigger: CGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTC...TGTGATATGGTCAAGCTCCCGTTTAAGAAATGGGAGTCTGTTGTTGCAGATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| CDS-3UTR TCA 90 bp | ACACAAGAGGCCATCTCCCTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTGGTGTTGGGCATCTCTaGGCCACTGCCCTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQEAISLYFPCLKVTPDPGVGHL*ATALRN Trigger: GTTCCTGAGGGCAGTGGCTCAGAGATGCCCAACACC...AGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAGGGAGATGGCCTCTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | TATGCATTTTCTTCTGTCCTTGACACAGTACTCAGCAAGCTTTCAGTCTGGAAGGAAGGTGGGTCCAGATaGCCCAGGGCCCAGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YAFSSVLDTVLSKLSVWKEGGSR*PRAQAA Trigger: CGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTC...CTTCCAGACTGAAAGCTTGCTGAGTACTGTGTCAAGGACAGAAGAAAATGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTTGACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGCATCTCTGAGCCACTaGCCTCAGGAACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFDYMLVCVPERARSYGAASLSH*PQELAS Trigger: GGAGGCCAGTTCCTGAGGGCAGTGGCTCAGAGATGC...AGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAGGGGGCAGGTGATCTCTGTGACTGTGAGTTCAAGACCAGTCTGCTCTGTCATGCCAGTACTGTaGTTGCACCAGGCGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQVISVTVSSRPVCSVMPVL*LHQAFL Trigger: CAAGAACGCCTGGTGCAAGCACAGTACTGGCATGAC...AGAGCAGACTGGTCTTGAACTCACAGTCACAGAGATCACCTGCCCCCTCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | ACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCACTGCCCTCAGGAACTaGCCTCCCTGGGAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSCTAHTAVQRNCLCEHLTALRN*PPWEKP Trigger: TGGCTTCTCCCAGGGAGGCCAGTTCCTGAGGGCAGT...GAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCCTATGGAGCTGGAGGTACAGATAGTTGTGAGCTGCTATGTAGGTGCGTGAGAACTCTCTCCTaGGCATCGGGGGAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARSYGAGGTDSCELLCRCVRTLS*ASGESK Trigger: TTTGGACTCCCCCGATGCCCAGGAGAGAGTTCTCAC...GCACCTACATAGCAGCTCACAACTATCTGTACCTCCAGCTCCATAGGACCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATGCATTTTCTTCTGTCCTTGACACAGTACTCAGCAAGCTTTCAGTCTGGCACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYAFSSVLDTVLSKLSVWHQRWW*RWVQMP Trigger: GGGCATCTGGACCCACCTTCACCACCACCGCTGGTG...CCAGACTGAAAGCTTGCTGAGTACTGTGTCAAGGACAGAAGAAAATGCATACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR CCA 90 bp | ACACAAGAGGCCATCTCCCTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTGTGAGAACTCTCTCCTaGGCATCGGGGGAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAISLYFPCLKVTPDPVRTLS*ASGESK Trigger: TTTGGACTCCCCCGATGCCCAGGAGAGAGTTCTCAC...AGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAGGGAGATGGCCTCTTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR TCA 90 bp | AAAGACAATCTCAAAACTATTTTTAGATCCTCCCACTTCCTGCCCTTAACCCTCCACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDNLKTIFRSSHFLPLTLHQRWW*RWVQMP Trigger: GGGCATCTGGACCCACCTTCACCACCACCGCTGGTG...GAGGGTTAAGGGCAGGAAGTGGGAGGATCTAAAAATAGTTTTGAGATTGTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTGATCCCCCGTTGGTCCTTATGAAGTCGCAGATGTaGGAACTCTCTCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYFPCLKVTPDPDPPLVLMKSQM*ELSPGH Trigger: ATGCCCAGGAGAGAGTTCTCACATCTGCGACTTCAT...AAGGACCAACGGGGGATCAGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR TCA 90 bp | AGGTCCTATGGAGCTGGAGGTACAGATAGTTGTGAGCTGCTATGTAGGTGCTGGATGAAGTCGCAGATGTaGGAACTCTCTCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSYGAGGTDSCELLCRCWMKSQM*ELSPGH Trigger: ATGCCCAGGAGAGAGTTCTCACATCTGCGACTTCAT...CCAGCACCTACATAGCAGCTCACAACTATCTGTACCTCCAGCTCCATAGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTGCATCTCTGAGCCACTaGCCTCAGGAACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLGFYLLQICMGFALRACASLSH*PQELAS Trigger: GGAGGCCAGTTCCTGAGGGCAGTGGCTCAGAGATGC...ACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | TTGACACAGTACTCAGCAAGCTTTCAGTCTGGAAGCTCATGTAGGGTATGGTTTACTGCCCTCAGGAACTaGCCTCCCTGGGAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQYSASFQSGSSCRVWFTALRN*PPWEKP Trigger: TGGCTTCTCCCAGGGAGGCCAGTTCCTGAGGGCAGT...AAACCATACCCTACATGAGCTTCCAGACTGAAAGCTTGCTGAGTACTGTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTGGAGGTACAGATAGTTAGATCAGGGTCATCATaGGAGGTGTTGGGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSLREPGPMELEVQIVRSGSS*EVLGIS Trigger: AGAGATGCCCAACACCTCCCATGATGACCCTGATCT...AACTATCTGTACCTCCAGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| 3UTR CAA 72 bp | CACACTCTCCTTGATAGGGTCATGCCAGTACTGTGCTaGCACCAGGCGTTCTTGCACAAGTTTGGAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLLDRVMPVLC*HQAFLHKFGVS Trigger: GCTTACTCCAAACTTGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCATGACCCTATCAAGGAGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| CDS-3UTR GCA 90 bp | CACAAACTTCTTGAGGGCCATCAGGTTCTTCTTGTAGGACTCATTGACACACCTAGACTCTCCATCCCATaGCAGATCACCAGCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLLEGHQVLLVGLIDTPRLSIP*QITSGG Trigger: ACCACCGCTGGTGATCTGGCATGGGATGGAGAGTCT...AGGTGTGTCAATGAGTCCTACAAGAAGAACCTGATGGCCCTCAAGAAGTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
||
| CDS-3UTR CCA 90 bp | ACACAAGAGGCCATCTCCCTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTTTATGGAGAGCAGGGTaGCCTCAAACTCAGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TQEAISLYFPCLKVTPDPLWRAG*PQTQRS Trigger: GGATCTCTGAGTTTGAGGCCACCCTGCTCTCCATAA...AGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAGGGAGATGGCCTCTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| 3UTR CAA 72 bp | ACAGATAGTTGTGAGCTGCTATGTAGGTGCTGGCAATaGAGCCCTGGTCCTCTGGAAGAACAGCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TDSCELLCRCWQ*SPGPLEEQPLN Trigger: GTTAAGAGGCTGTTCTTCCAGAGGACCAGGGCTCAATTGCCAGCACCTACATAGCAGCTCACAACTATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGCCTTTAATCCCTGTACTTGAAAGGCAGAGGGGGCAGGTGATCTCTGTGTCCTTTTCCAGAATCTaGCACACCATGTTGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMPLIPVLERQRGQVISVSFSRI*HTMLTW Trigger: CCAAGTCAACATGGTGTGTCAGATTCTGGAAAAGGA...CACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTACAGGGATTAAAGGCATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR TCA 90 bp | CACTGGTGTTTTGACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATAGTCCAAAGACACCTTaGTGTTGTCCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HWCFDYMLVCVPERARSYSPKTP*CCPPTE Trigger: CTCAGTTGGAGGACAACATCAAGGTGTCTTTGGACT...ATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTCAAAACACCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAGGGGGCAGGTGATCTCTGTGACTGTGAGTTCAAGACCAGTCTGCTCTTCTTGTAGGACTCATTaGCACACCTCTCTTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQVISVTVSSRPVCSSCRTH*HTSLDL Trigger: TAAATCAAGAGAGGTGTGTCAATGAGTCCTACAAGA...AGAGCAGACTGGTCTTGAACTCACAGTCACAGAGATCACCTGCCCCCTCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| 3UTR CAA 72 bp | TCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTaGTGTGAACATCTCAGACCTGGGCTTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCTAHTAVQRNC*CEHLRPGLLFA Trigger: AGCAAATAAAAGCCCAGGTCTGAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR CAA 72 bp | CATGCTTCGCAGATCCTTCCTGGTTGGCATCTGTTCTaGACGTGTAACACGAATGCACGGCAGTATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HASQILPGWHLF*TCNTNARQYAF Trigger: AAATGCATACTGCCGTGCATTCGTGTTACACGTCAAGAACAGATGCCAACCAGGAAGGATCTGCGAAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR CCA 90 bp | AAAGACAATCTCAAAACTATTTTTAGATCCTCCCACTTCCTGCCCTTAACCCTCGTGAGAACTCTCTCCTaGGCATCGGGGGAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDNLKTIFRSSHFLPLTLVRTLS*ASGESK Trigger: TTTGGACTCCCCCGATGCCCAGGAGAGAGTTCTCAC...GAGGGTTAAGGGCAGGAAGTGGGAGGATCTAAAAATAGTTTTGAGATTGTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| 3UTR CAA 72 bp | ACACGAATGCACGGCAGTATGCATTTTCTTCTGTCCTaGACACAGTACTCAGCAAGCTTTCAGTCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRMHGSMHFLLS*TQYSASFQSGS Trigger: GCTTCCAGACTGAAAGCTTGCTGAGTACTGTGTCAAGGACAGAAGAAAATGCATACTGCCGTGCATTCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTTTGCAATGGTGTGACATTTATGCCACTTATAATATTAAGGGCAAGAACAGGTGTTGGGCATCTCTaGGCCACTGCCCTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLCNGVTFMPLIILRARTGVGHL*ATALRN Trigger: GTTCCTGAGGGCAGTGGCTCAGAGATGCCCAACACC...TGTTCTTGCCCTTAATATTATAAGTGGCATAAATGTCACACCATTGCAAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR GCA 90 bp | AAAGACAATCTCAAAACTATTTTTAGATCCTCCCACTTCCTGCCCTTAACCCTCTGCCAGTACTGTGCTTaGACCAGGCGTTCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KDNLKTIFRSSHFLPLTLCQYCA*TRRSCT Trigger: TGTGCAAGAACGCCTGGTGCAAGCACAGTACTGGCA...GAGGGTTAAGGGCAGGAAGTGGGAGGATCTAAAAATAGTTTTGAGATTGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | CTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTGATCCCCCGTTGGTCCTTCACACCATGTTGACTTaGACATTAACATTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYFPCLKVTPDPDPPLVLHTMLT*TLTFKK Trigger: CTTCTTGAATGTTAATGTCCAAGTCAACATGGTGTG...AAGGACCAACGGGGGATCAGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | ACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCCTCTTGATTTATGTCTaGCAAGAAGATGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSCTAHTAVQRNCLCEHLLLIYV*QEDAVV Trigger: AACTACAGCATCTTCTTGGCAGACATAAATCAAGAG...GAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | ACATCATGCACGGCCCACACAGCAGTGCAGAGAAATTGCTTGTGTGAACATCTCCACACCATGTTGACTTaGACATTAACATTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSCTAHTAVQRNCLCEHLHTMLT*TLTFKK Trigger: CTTCTTGAATGTTAATGTCCAAGTCAACATGGTGTG...GAGATGTTCACACAAGCAATTTCTCTGCACTGCTGTGTGGGCCGTGCATGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | TGTTTTGACTACATGCTTGTCTGTGTCCCTGAGAGAGCCAGGTCCTATGGAGCTCACACCATGTTGACTTaGACATTAACATTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFDYMLVCVPERARSYGAHTMLT*TLTFKK Trigger: CTTCTTGAATGTTAATGTCCAAGTCAACATGGTGTG...AGCTCCATAGGACCTGGCTCTCTCAGGGACACAGACAAGCATGTAGTCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121870.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTTATAGAGTGCTCTCCTaGAGGGGAATGGTTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKEKEKQAVGEFCGANGAYRVLS*RGMVSL Trigger: TAAGGAAACCATTCCCCTCCAGGAGAGCACTCTATA...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTAGTCCAAAGACACCTTaGTGTTGTCCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQICMGFALRACLFFTSSPKTP*CCPPTE Trigger: CTCAGTTGGAGGACAACATCAAGGTGTCTTTGGACT...AGAAGTGAAAAAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR TCA 90 bp | ACCTTTTTAGACTATTTCTCCCGTTCTTTGCAATGGTGTGACATTTATGCCACTATGAAGTCGCAGATGTaGGAACTCTCTCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFLDYFSRSLQWCDIYATMKSQM*ELSPGH Trigger: ATGCCCAGGAGAGAGTTCTCACATCTGCGACTTCAT...AGTGGCATAAATGTCACACCATTGCAAAGAACGGGAGAAATAGTCTAAAAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR GCA 90 bp | TACAGCCCTACTGGATTTAAATCCAGTCCAAACCTTTTAATTACTAGGAATTCAACTCAGAGATCCAGCTaGCTCTGCCTCCAAAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSPTGFKSSPNLLITRNSTQRSS*LCLQSA Trigger: CGCACTTTGGAGGCAGAGGCAGCTGGATCTCTGAGT...TGAATTCCTAGTAATTAAAAGGTTTGGACTGGATTTAAATCCAGTAGGGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
||
| CDS-3UTR GCA 90 bp | GACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTATAGCATTGTATCCCTaGTGCAACTTAGGATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLGFYLLQICMGFALRACIALYP*CNLGSF Trigger: AAAGGATCCTAAGTTGCAGCAGGGATACAATGCTAT...ACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| 3UTR CAA 72 bp | ACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTaGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWAFICSKFVWV*PSELVSFSLLS Trigger: AGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| 3UTR CAA 72 bp | GAACATCTCAGACCTGGGCTTTTATTTGCTCCAAATTaGTATGGGTTTTGCCCTCAGAGCTTGTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EHLRPGLLFAPN*YGFCPQSLSLF Trigger: AAAAAGAGACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTCTGAGATGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTCATTCTTTAGATATTTaGAGATGGTCCCCTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKEKEKQAVGEFCGANGAHSLDI*RWSPSL Trigger: TAAGGAAGGGGACCATCTTCAAATATCTAAAGAATG...AGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGATCAGGGTGGTTTCTTCTTTAACAATCAAAGTTATCATCTGTTTAATCCATCACAAACTTCTTaGGGGCCATCAGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGDQGGFFFNNQSYHLFNPSQTS*GPSGSS Trigger: AGAAGAACCTGATGGCCCTCAAGAAGTTTGTGATGG...ATTAAACAGATGATAACTTTGATTGTTAAAGAAGAAACCACCCTGATCCCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| 3UTR CAA 72 bp | TCTGCAACAACAGACTCCCATTTCTTAAACGGGAGCTaGACCATATCACAAAGTTGTAAAACAATCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SATTDSHFLNGS*TISQSCKTISM Trigger: CATGGAGATTGTTTTACAACTTTGTGATATGGTCAAGCTCCCGTTTAAGAAATGGGAGTCTGTTGTTGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030412.11 ENSMUST00000120157.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGGGATCAGGGTGGTTTCTTCTTTAACAATCAAAGTTATCATCTGTTTAATTGTCTGCCAAGAAGATaGTGTAGTTTCGGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: MGDQGGFFFNNQSYHLFNCLPRR*CSFGTH Trigger: GTGTGTACCGAAACTACAGCATCTTCTTGGCAGACA...ATTAAACAGATGATAACTTTGATTGTTAAAGAAGAAACCACCCTGATCCCCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTAGAAAAGGTATGATGTaGGCAGTAAACCATTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSELVSFSLLSLLGTITRKGMM*AVNHSL Trigger: TAAAGAATGGTTTACTGCCCACATCATACCTTTTCT...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
||
| CDS TCA 90 bp | ACAACAGCTGTCCCCCATCCCATGCCAGATCACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCCCAGGGCCCAGGCGGCGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TTAVPHPMPDHQRWW*RWVQMPQGPGGAAP Trigger: TGGTGCTGCGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTCACCACCACCGCTGGTGATCTGGCATGGGATGGGGGACAGCTGTTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030412.11 ENSMUST00000097902.5 ENSMUST00000121870.8 |
||
| CDS TCA 90 bp | ACAATACAGACTCTCCATCCCATGCCAGATCACCAGCGGTGGTGGTaGAGGTGGGTCCAGATGCCCCAGGGCCCAGGCGGCGCAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: TIQTLHPMPDHQRWW*RWVQMPQGPGGAAP Trigger: TGGTGCTGCGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTCACCACCACCGCTGGTGATCTGGCATGGGATGGAGAGTCTGTATTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120157.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGGGGGCAGGTGATCTCTGTGACTGTGAGTTCAAGACCAGTCTGCTCTACCATCACAAACTTCTaGAGGGCCATCAGGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RQRGQVISVTVSSRPVCSTITNF*RAIRFF Trigger: GAAGAACCTGATGGCCCTCAAGAAGTTTGTGATGGT...AGAGCAGACTGGTCTTGAACTCACAGTCACAGAGATCACCTGCCCCCTCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
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| CDS TCA 90 bp | CAAAGTGCGTTCTTGCACAAGTTTGGAGTAAGCACCGGCATTAAGTaGCTTCCTGATGAAGTCGCAGATGTGAGAACTCTCTCCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: QSAFLHKFGVSTGIK*LPDEVADVRTLSWA Trigger: TGCCCAGGAGAGAGTTCTCACATCTGCGACTTCATCAGGAAGTCACTTAATGCCGGTGCTTACTCCAAACTTGTGCAAGAACGCACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
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| CDS-3UTR CAA 90 bp | ACACAAGAGGCCATCTCCCTTTACTTTCCATGTTTGAAGGTGACCCCTGACCCTCTCCAAAGTGCGTTCTaGCACAAGTTTGGAGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: TQEAISLYFPCLKVTPDPLQSAF*HKFGVS Trigger: GCTTACTCCAAACTTGTGCAAGAACGCACTTTGGAG...AGGGTCAGGGGTCACCTTCAAACATGGAAAGTAAAGGGAGATGGCCTCTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
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| CDS-3UTR CAA 90 bp | TTGCCCTCAGAGCTTGTCTCTTTTTCACTTCTGTCTCTTTTAGGCACAATTACTCGGTACACACTCTCCTaGATAGGGTCATGCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LPSELVSFSLLSLLGTITRYTLS*IGSCQY Trigger: GTACTGGCATGACCCTATCAAGGAGAGTGTGTACCG...AGTAATTGTGCCTAAAAGAGACAGAAGTGAAAAAGAGACAAGCTCTGAGGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
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| CDS-3UTR CAA 90 bp | GACCTGGGCTTTTATTTGCTCCAAATTTGTATGGGTTTTGCCCTCAGAGCTTGTACTAGCTTTCCTGCTTaGTCCATTTTCTTTAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: DLGFYLLQICMGFALRACTSFPA*SIFFSP Trigger: GGGGCTAAAGAAAATGGACAAAGCAGGAAAGCTAGT...ACAAGCTCTGAGGGCAAAACCCATACAAATTTGGAGCAAATAAAAGCCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
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| CDS-3UTR CAA 90 bp | CTGATCTGCAACAACAGACTCCCATTTCTTAAACGGGAGCTTGACCATATCACAAATGGTTTCCTTAGCTaGGCCACTTCTGTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: LICNNRLPFLKRELDHITNGFLS*ATSVKS Trigger: GGATTTTACAGAAGTGGCCAAGCTAAGGAAACCATT...TGTGATATGGTCAAGCTCCCGTTTAAGAAATGGGAGTCTGTTGTTGCAGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAAAGGAAAAACAGGCAGTGGGTGAATTCTGTGGTGCTAATGGTGCTTCCATTCTTTAGATATTaGAAGATGGTCCCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ERKRKNRQWVNSVVLMVLPFFRY*KMVPFL Trigger: AAGGAAGGGGACCATCTTCAAATATCTAAAGAATGG...AAGCACCATTAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030412.11 |
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| CDS GCA 72 bp | CAGATCACCAGCGGTGGTGGTGAAGGTGGGTCCAGATaGCCCAGGGCCCAGGCGGCGCAGCACCAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QITSGGGEGGSR*PRAQAAQHQGS Trigger: GCTGCCTTGGTGCTGCGCCGCCTGGGCCCTGGGGCATCTGGACCCACCTTCACCACCACCGCTGGTGATCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030412.11 ENSMUST00000097902.5 ENSMUST00000120157.2 ENSMUST00000121870.8 |
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| CDS GCA 72 bp | GCAGGGTGGCCTCAAACTCAGAGATCCAGCTGCCTCTaGCTCCAAAGTGCGTTCTTGCACAAGTTTGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: AGWPQTQRSSCL*LQSAFLHKFGV Trigger: TACTCCAAACTTGTGCAAGAACGCACTTTGGAGGCAGAGGCAGCTGGATCTCTGAGTTTGAGGCCACCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
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| CDS GCA 72 bp | TCAAACTCAGAGATCCAGCTGCCTCTGCCTCCAAAGTaGGTTCTTGCACAAGTTTGGAGTAAGCACCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SNSEIQLPLPPK*VLAQVWSKHRH Trigger: ATGCCGGTGCTTACTCCAAACTTGTGCAAGAACGCACTTTGGAGGCAGAGGCAGCTGGATCTCTGAGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097902.5 |
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