Pregenerated sensors for PPRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055491Ensembl transcript IDs: ENSMUST00000062322.11, ENSMUST00000099392.10, ENSMUST00000111899.8, ENSMUST00000126127.8, ENSMUST00000135327.8, ENSMUST00000150158.8
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGAAGAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATaGCCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAA | + |
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Preference number: 1 (lower is better) Translates to: LEEAGHLQRKWVGEE*PGLPPEVLLGLFQQ Trigger: TTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTCTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| 3UTR TCA 72 bp | AAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCCTaGGGTTCTTCTGGGCCTGTTTCAACAATGTATCAA | + |
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Preference number: 3 (lower is better) Translates to: KMGRGGMPRVTS*GSSGPVSTMYQ Trigger: TTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGGGCATTCCTCCCCTACCCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTGGAGCTGCGGGGCTaGCCGGCCCGGAGCTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVELRG*PARSLG Trigger: CCCTAAGCTCCGGGCCGGCCAGCCCCGCAGCTCCAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTAGGTTGCAAAGGAGGTaGGGGCAGGCGGGGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRLQRR*GQAGDS Trigger: GGAGTCCCCCGCCTGCCCCCACCTCCTTTGCAACCT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCCTCTTCCCCATCACTaGGCTGCTGAGGAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPPLPHH*AAEEEG Trigger: CCCCTCCTCCTCAGCAGCGCAGTGATGGGGAAGAGG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGGGATGCCAAGTGGGTaGGGTTGGGCAAGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPGMPSG*GWASSR Trigger: CCTACTGCTTGCCCAACCTCACCCACTTGGCATCCC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCTGCTCCCTCGGCTGTaGCTTCTTCCTCAGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPLLPRL*LLPQGM Trigger: CATGCCCTGAGGAAGAAGGCACAGCCGAGGGAGCAG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTCCCATACGGCGCTTaGCTTCGACTCGCCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVPYGA*LRLAQL Trigger: CAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCGTTGCTGCCTTCGCTaGCGGTACTCAGATAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRCCLR*RYSDRL Trigger: CAGCCTATCTGAGTACCGTCAGCGAAGGCAGCAACG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCTTCCTGGCTGGGGCTaGTGGAACAAGGCAAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPLPGWG*WNKARD Trigger: ATCCCTTGCCTTGTTCCATCAGCCCCAGCCAGGAAG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACCCG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVPWRV*KRHLNP Trigger: CGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTATGACCTCAGCCGCCTaGTACAGGCTTCCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPMTSAA*YRLPHR Trigger: CCTGTGTGGAAGCCTGTACCAGGCGGCTGAGGTCAT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTGTCCGAGAGAGATTaGGCAGCTTGTGCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVSERD*AACAER Trigger: CCTCTCTGCACAAGCTGCTCAATCTCTCTCGGACAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCACCAGGTGCAGCATTaGCAACTGCAGGGGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPHQVQH*QLQGNH Trigger: GTGATTCCCCTGCAGTTGGCAATGCTGCACCTGGTG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTTCTACTGGTGGAGCTaGGGGGCTGGCCGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVFYWWS*GAGRPG Trigger: TCCGGGCCGGCCAGCCCCGCAGCTCCACCAGTAGAA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTTCACTGATGAACGCCTaGACCACATCCTCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPSLMNA*TTSSGP Trigger: GGGTCCTGAGGATGTGGTGCAGGCGTTCATCAGTGA...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTAGATTGAGCAGCTTGTaGAGAGAGGAGCTCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRLSSL*REELSR Trigger: TCGGGAGAGCTCCTCTCTGCACAAGCTGCTCAATCT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTATCACCAGTTGTGGCTaGCTGGCCAACAATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPITSCG*LANNLQ Trigger: CTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGAT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGACTACTTCCTGTGCTaGGCCCCAAAGGGTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPDYFLC*APKGQL Trigger: CAATTGACCCTTTGGGGCCCAGCACAGGAAGTAGTC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCCAGTTGTGGCTGCCTaGCCAACAATCTCCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPPVVAA*PTISST Trigger: TGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTTCCAGGAGCACAGACTaGGATCCAGAAGGAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPSRSTD*DPEGIC Trigger: GCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTGGA...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCCACTTGCCAACAACTaGGGGCTGAGAATTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPPLANN*GLRIPV Trigger: GACAGGAATTCTCAGCCCCCAGTTGTTGGCAAGTGG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCTTAGACGGGCTGGATaGACAGCAGGTAGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPLRRAG*TAGSFA Trigger: TGCAAAGCTACCTGCTGTCCATCCAGCCCGTCTAAG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCAGAGTTGTCGAGTTTaGCAGCAAGCATCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPQSCRV*QQASDH Trigger: GTGGTCAGATGCTTGCTGGCAAACTCGACAACTCTG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCTGAGCTGCTGCTGCTaGTGCTGCTGCAGCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVLSCCC*CCCSTP Trigger: AGGCGTGCTGCAGCAGCAGCAGCAGCAGCAGCTCAG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTAGGGGGTGGTCTAACTaGAAGTGGCATCTCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRGWSN*KWHLMR Trigger: TCTCATGAGATGCCACTTGCAGTTAGACCACCCCCT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCAAAAGGGAGGCTGTTaGAGCCCTGGGCCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVQKGGC*SPGPHP Trigger: TGGGTGGGGCCCAGGGCTGCAACAGCCTCCCTTTTG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGATAAGGTCACGTTCTaGGGGTGTCCGAGAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPDKVTF*GCPREI Trigger: AATCTCTCTCGGACACCCCCAGAACGTGACCTTATC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGCTCTGAATCAGGAATaGTGTCAAAAGGGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPALNQE*CQKGTG Trigger: ACCTGTCCCCTTTTGACACCATTCCTGATTCAGAGC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCACAGACACAGTCTCTaGTACAGCTATAGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPHRHSL*YSYRAS Trigger: AGAAGCCCTATAGCTGTACCAGAGACTGTGTCTGTG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTAAGTTTGCTTGCAGATaGCTCAGGAGTAGGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPKFACR*LRSRGN Trigger: GTTTCCCCTACTCCTGAGCCATCTGCAAGCAAACTT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAGGCGGGGGACTCCATaGCCACCTGAAGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVRRGTP*PPEGRG Trigger: TCCTCTTCCTTCAGGTGGCCATGGAGTCCCCCGCCT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTATCCATAGGCACAGCTaGAGCTGTAAGGTGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPIHRHS*SCKVKL Trigger: CAGTTTCACCTTACAGCTCCAGCTGTGCCTATGGAT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCTCCTTTTTGGCTTCTaGCTTCTCAAACTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPLLFGF*LLKLLQ Trigger: TTGGAGCAGTTTGAGAAGTCAGAAGCCAAAAAGGAG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCAGGTTCTCAGAATCTaGATTGTCCAAGATCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPQVLRI*IVQDLR Trigger: ACGGAGATCTTGGACAATGCAGATTCTGAGAACCTG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCACCCCATCGAGGTCTTaGTCTCGAGGGTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVTPSRS*SRGSPA Trigger: AGCTGGAGACCCTCGAGACCAAGACCTCGATGGGGT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTTCTGTGGGGGTCTCTaGGAGACTAGGCCACTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVFCGGL*ETRPLA Trigger: GGCAAGTGGCCTAGTCTCCCAGAGACCCCCACAGAA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCTTTGTAGGTTCTACTaGTGGAGCTGCGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVLCRFY*WSCGAG Trigger: GCCAGCCCCGCAGCTCCACCAGTAGAACCTACAAAG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGGGAGATACAGGCACTaGCTGAGCCTCCGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVGRYRH*LSLRLC Trigger: ACAAAGCCGGAGGCTCAGCCAGTGCCTGTATCTCCC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTGTGAACTGCCTGCCTaGGAGTTCACCTCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVCELPA*EFTSAD Trigger: GTCTGCAGAGGTGAACTCTCAGGCAGGCAGTTCACA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCTGGGGCTGTTTCTGTaGACTGCCTGCCTGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVLGLFL*TACLRV Trigger: AACTCTCAGGCAGGCAGTTCACAGAAACAGCCCCAG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGACTCCATGGCCACCTaGAGGAAGAGGAAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVDSMAT*RKRKQR Trigger: CCTTTGCTTCCTCTTCCTTCAGGTGGCCATGGAGTC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAAGCTGCTGCTGCTGCTaGTGCTGCAGCACGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESCCCC*CCSTPR Trigger: CCTAGGCGTGCTGCAGCAGCAGCAGCAGCAGCAGCT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTCAAGGGATGCCAAGTaGGTGAGGTTGGGCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVSRDAK*VRLGKQ Trigger: CTGCTTGCCCAACCTCACCCACTTGGCATCCCTTGA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGTGGAGCTGTCTTCCTaGCTGGGGCTGATGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVVELSS*LGLMEQ Trigger: TTGTTCCATCAGCCCCAGCCAGGAAGACAGCTCCAC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGAGGACACTCCTTTTTaGCTTCTGACTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: EAGHLQRKWVGEECPGLPEDTPF*LLTSQT Trigger: AGTTTGAGAAGTCAGAAGCCAAAAAGGAGTGTCCTC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCCAACAACTGGGGGCTaGGAATTCCTGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVPTTGG*EFLSSA Trigger: AGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGCTGGAGCTGTAAGGTaGAACTGGTGCAGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEAGAVR*NWCRRG Trigger: CCCCCTCCTGCACCAGTTTCACCTTACAGCTCCAGC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR GCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATGCTGCTGCTGCTGCTaGTGCAGCACGCCTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSECCCCC*CSTPRI Trigger: GATCCTAGGCGTGCTGCAGCAGCAGCAGCAGCAGCA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATCATTCCCTTCCTCATaGACCTGCTCCGCGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESFPSS*TCSAAL Trigger: GAGCGCCGCGGAGCAGGTCCATGAGGAAGGGAATGA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGGTCATCACCAGTTGTaGCTGCCTGGCCAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVGHHQL*LPGQQS Trigger: AGATTGTTGGCCAGGCAGCCACAACTGGTGATGACC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGATGGGCTTCTCCTTTaGTCTGTTCTCCTGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVDGLLL*SVLLGL Trigger: GAGACCCAGGAGAACAGACCAAAGGAGAAGCCCATC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATTGCCAGCAAGCATCTaGCCACTGAAACCGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSELPASI*PLKPAT Trigger: GGTCGCCGGTTTCAGTGGTCAGATGCTTGCTGGCAA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGATACAGGCACTGGCTaGGCCTCCGGCTTTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEDTGTG*ASGFVG Trigger: ACCTACAAAGCCGGAGGCTCAGCCAGTGCCTGTATC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCAGACTCGACAGATCTaGTGCTTCGATCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVQTRQI*CFDPNL Trigger: GAGATTGGGATCGAAGCATCAGATCTGTCGAGTCTG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCACTGCAAGGCAGGACTaGTTCCTAGAGACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVTARQD*FLETHP Trigger: TGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCAGT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCCCCAAAGGGTCAATTaGGGTGATAAGGTCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVPQRVN*GDKVTF Trigger: GAACGTGACCTTATCACCCCAATTGACCCTTTGGGG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCAGAGTCAACAGGCATaGAGTCAGCTTGAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVQSQQA*SQLEQS Trigger: ACTCTGCTCAAGCTGACTCCATGCCTGTTGACTCTG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAACAGCTCTGTACCAGATaGAGCCTGATCACCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEQLCTR*SLITRC Trigger: GCACCTGGTGATCAGGCTTCATCTGGTACAGAGCTG...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGGTACTCAGATAGGCTaGGAGGCCGAGGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEGTQIG*EAEVWL Trigger: AAGCCAAACCTCGGCCTCTCAGCCTATCTGAGTACC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTGGCATTTGTCTCATTaGTACTGGAAGTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVWHLSH*YWKSRR Trigger: CCTCCTGGACTTCCAGTATCAATGAGACAAATGCCA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR GCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATTCACCCTCAAGGGATaGCAAGTGGGTGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEFTLKG*QVGEVG Trigger: CCCAACCTCACCCACTTGGCATCCCTTGAGGGTGAA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAGAATTCCTGTCTTCTaGTTCCGTTTGCCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVRIPVF*FRLPLL Trigger: CAGCAACGGCAAACGGAAGCAGAAGACAGGAATTCT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAAGCAGTAGGGATGCATaGCCCGAACCAGCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESSRDA*PEPAHS Trigger: TGAGTGAGCTGGTTCGGGCCATGCATCCCTACTGCT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCATTTAATGAGAGAGTaGGGTTGGCTTGGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVHLMRE*GWLGWS Trigger: AGACCAGCCAAGCCAACCCCACTCTCTCATTAAATG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGACTCTGTACCAAGGTaGACACTTTGTGTTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVDSVPR*TLCVSA Trigger: AGCCGAAACACAAAGTGTCCACCTTGGTACAGAGTC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTTTGGTCTGTTCTCCTaGGTCTCAGACTTTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVFGLFS*VSDFSL Trigger: GAGGCTAAAGTCTGAGACCCAGGAGAACAGACCAAA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGTGGGCATGAGTAACTaGAAGGCAGGACTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEVGMSN*KAGLLP Trigger: AGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCAC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAACCATGTAGCTCTGCATaGTCTCCAGGAGGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEPCSSA*SPGGSH Trigger: ATGAGACCCTCCTGGAGACCATGCAGAGCTACATGG...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTTCCACACAGGCTGTTaGCTGTTCCTTGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVFHTGC*LFLVLL Trigger: AAGAAGAACAAGGAACAGCCAACAGCCTGTGTGGAA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAATGAGAGAGTGGGGTTaGCTTGGCTGGTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEMREWG*LGWSQA Trigger: TGCTTGAGACCAGCCAAGCCAACCCCACTCTCTCAT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAACGAGGTTTGGCTTCCTaGGTTGTAGCGCTGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSERGLAS*VVALVL Trigger: TAGTACCAGCGCTACAACCCAGGAAGCCAAACCTCG...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATATAGGGCTTCTCTGTaGAGCTGTCTTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEYRASL*SCLPGW Trigger: CCAGCCAGGAAGACAGCTCCACAGAGAAGCCCTATA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAACTTTGTGTTTCGGCTaGGGAGATACAGGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSETLCFG*GDTGTG Trigger: GCCAGTGCCTGTATCTCCCCAGCCGAAACACAAAGT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATCTCCGTCAGAGCTGTaGGCAGCGACATTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESPSEL*AATFHS Trigger: AGAATGAAATGTCGCTGCTCACAGCTCTGACGGAGA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATTCCTTGGGTGTCAATaGCTCCATGATTTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEFLGCQ*LHDFPG Trigger: CCCAGGGAAATCATGGAGTCATTGACACCCAAGGAA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR TCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGCAAGTGGCATCTCATaGGATGACACCTGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSEASGIS*DDTCSE Trigger: CTCTGAACAGGTGTCATCTCATGAGATGCCACTTGC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCCTCCAGAGATAATCTaGTCTCTCCAAAATCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVPPEII*SLQNPQ Trigger: TTGAGGATTTTGGAGAGAGCAGATTATCTCTGGAGG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR CCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAATCTTCCTACCCTTTCTaGGAACTTTCTGAGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESSYPF*ELSENP Trigger: AGGGTTCTCAGAAAGTTCCCAGAAAGGGTAGGAAGA...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
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| CDS-3UTR GCA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAAGTGGGAATAGCCACTaGAGGTTCAATTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRFFWACFNNVSKSSESGNSH*RFNSFL Trigger: AAGAAAGGAATTGAACCTGCAGTGGCTATTCCCACT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS GCA 90 bp | CGGAGCCCCCGGTCCCATACGGCGCTTGGCTTCGACTCGCCCAACTaGCGCCACGCACTCCACCGCCAGGGTCAGGACCCGGGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRSHTALGFDSPN*RHALHRQGQDPGPQ Trigger: CTGGGGGCCCGGGTCCTGACCCTGGCGGTGGAGTGCGTGGCGGCAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACCGGGGGCTCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS TCA 90 bp | CCGATGAGGACGAGGACGCTTCACTGGTCCGGCTGGACCCAGAGCTaGCAGAACGGCTACTGCGGCCACGGCGGCCTTGCCAGCCCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PMRTRTLHWSGWTQS*QNGYCGHGGLASPY Trigger: GTAGGGGCTGGCAAGGCCGCCGTGGCCGCAGTAGCCGTTCTGTCAGCTCTGGGTCCAGCCGGACCAGTGAAGCGTCCTCGTCCTCATCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS TCA 90 bp | CCGAACCAGCTCACTCAAGGAGGAGATGCTCTCGTCACCAGGGGCTaGCGCTGGCGCATCTGCTCCCTCGGCTGTGCCTTCTTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNQLTQGGDALVTRG*RWRICSLGCAFFLR Trigger: CCTGAGGAAGAAGGCACAGCCGAGGGAGCAGATGCGCCAGCGTCAGCCCCTGGTGACGAGAGCATCTCCTCCTTGAGTGAGCTGGTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 90 bp | AGCAGTAGGGATGCATGGCCCGAACCAGCTCACTCAAGGAGGAGATaGTCTCGTCACCAGGGGCTGACGCTGGCGCATCTGCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRDAWPEPAHSRRR*SRHQGLTLAHLLPR Trigger: CCGAGGGAGCAGATGCGCCAGCGTCAGCCCCTGGTGACGAGAGCATCTCCTCCTTGAGTGAGCTGGTTCGGGCCATGCATCCCTACTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | AAGGCGGTACACTCGGAGGGAAAGGAGGCAAAGGAGCGGGCACCGTaGACGGGATGGGTCCAGCAGGAGACACAGACGGCAAAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAVHSEGKEAKERAP*TGWVQQETQTAKEE Trigger: CTCCTCCTTTGCCGTCTGTGTCTCCTGCTGGACCCATCCCGTCCACGGTGCCCGCTCCTTTGCCTCCTTTCCCTCCGAGTGTACCGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | CGAGAAAGACTGACAAAGCTAGAGTCATTCCCTTCCTCATGGACCTaGTCCGCGGCGCTCACGGAGCCCCCGGTCCCATACGGCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RERLTKLESFPSSWT*SAALTEPPVPYGAW Trigger: CCAAGCGCCGTATGGGACCGGGGGCTCCGTGAGCGCCGCGGAGCAGGTCCATGAGGAAGGGAATGACTCTAGCTTTGTCAGTCTTTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | GCTGTTGCAGCCCTGGGCCCCACCCAAGGGATCCATAGGCACAGCTaGAGCTGTAAGGTGAAACTGGTGCAGGAGGGGGTACCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVAALGPTQGIHRHS*SCKVKLVQEGVPKA Trigger: TGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTTACAGCTCCAGCTGTGCCTATGGATCCCTTGGGTGGGGCCCAGGGCTGCAACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | GCACGTGGGGTGGGCAGGAAGGACAGCTTCCTTAGACGGGCTGGATaGACAGCAGGTAGCTTTGCAACAGCGCTCTGCTTTGGCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGVGRKDSFLRRAG*TAGSFATALCFGTG Trigger: CCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCATCCAGCCCGTCTAAGGAAGCTGTCCTTCCTGCCCACCCCACGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | CGCTGGCGCATCTGCTCCCTCGGCTGTGCCTTCTTCCTCAGGGCATaGCAGGTGCATGGGGAAGTCCAGGACATTGTTCACAGAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RWRICSLGCAFFLRA*QVHGEVQDIVHRVV Trigger: GACAACTCTGTGAACAATGTCCTGGACTTCCCCATGCACCTGGCATGCCCTGAGGAAGAAGGCACAGCCGAGGGAGCAGATGCGCCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GTCAGCGTCAGCATCAGCCTGTCCCTCAAGTTCACCCTCAAGGGATaGCAAGTGGGTGAGGTTGGGCAAGCAGTAGGGATGCATGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSVSISLSLKFTLKG*QVGEVGQAVGMHGP Trigger: CGGGCCATGCATCCCTACTGCTTGCCCAACCTCACCCACTTGGCATCCCTTGAGGGTGAACTTGAGGGACAGGCTGATGCTGACGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | CTGCCGCACCACGACTGGGATCTCGAGGTCATCACCAGTTGTGGCTaGCTGGCCAACAATCTCCAGTACAACACAGCCCTCAGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPHHDWDLEVITSCG*LANNLQYNTALRQR Trigger: ACGCTGCCTGAGGGCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | CGGAGGTGGAGAAACAGTAGACCAAAAGGGAGGCTGTTGCAGCCCTaGGCCCCACCCAAGGGATCCATAGGCACAGCTGGAGCTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRWRNSRPKGRLLQP*APPKGSIGTAGAVR Trigger: CCTTACAGCTCCAGCTGTGCCTATGGATCCCTTGGGTGGGGCCCAGGGCTGCAACAGCCTCCCTTTTGGTCTACTGTTTCTCCACCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGGTCCCATACGGCGCTaGGCTTCGACTCGCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPGPIRR*ASTRPT Trigger: AGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGACCCCATCGAGGTCTaGGTCTCGAGGGTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPDPIEV*VSRVSS Trigger: GCTGGAGACCCTCGAGACCAAGACCTCGATGGGGTC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | GTGGGGGTCTCTGGGAGACTAGGCCACTTGCCAACAACTGGGGGCTaGGAATTCCTGTCTTCTGCTTCCGTTTGCCGTTGCTGCCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGVSGRLGHLPTTGG*EFLSSASVCRCCLR Trigger: GCGAAGGCAGCAACGGCAAACGGAAGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGAGACCCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 90 bp | TGGGCCCCACCCAAGGGATCCATAGGCACAGCTGGAGCTGTAAGGTaGAACTGGTGCAGGAGGGGGTACCCAAGGCACATTGCAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WAPPKGSIGTAGAVR*NWCRRGYPRHIASW Trigger: CCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTTACAGCTCCAGCTGTGCCTATGGATCCCTTGGGTGGGGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 90 bp | AAGGTGGACACTTTGTGTTTCGGCTGGGGAGATACAGGCACTGGCTaGGCCTCCGGCTTTGTAGGTTCTACTGGTGGAGCTGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVDTLCFGWGDTGTG*ASGFVGSTGGAAGL Trigger: CAGCCCCGCAGCTCCACCAGTAGAACCTACAAAGCCGGAGGCTCAGCCAGTGCCTGTATCTCCCCAGCCGAAACACAAAGTGTCCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GGGTCAGGTGGCATTTGTCTCATTGATACTGGAAGTCCAGGAGGTTaGAAAGGAGGTGGGGGCAGGCGGGGGACTCCATGGCCACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSGGICLIDTGSPGG*KGGGGRRGTPWPPE Trigger: TTCAGGTGGCCATGGAGTCCCCCGCCTGCCCCCACCTCCTTTGCAACCTCCTGGACTTCCAGTATCAATGAGACAAATGCCACCTGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GAACTGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCGTCTaGCTGCCGCAACTTGTGGCCACTCTCAATGGCTGCAAATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELPSAPKAEIKGLLV*LPQLVATLNGCKCL Trigger: GAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | CGCACCACGACTGGGATCTCGAGGTCATCACCAGTTGTGGCTGCCTaGCCAACAATCTCCAGTACAACACAGCCCTCAGGCAGCGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTTTGISRSSPVVAA*PTISSTTQPSGSVN Trigger: GTTGACGCTGCCTGAGGGCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCTGAGAGGCCGAGGTTaGGCTTCCTGGGTTGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPLRGRG*ASWVVA Trigger: CGCTACAACCCAGGAAGCCAAACCTCGGCCTCTCAG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | GCAAAACAAGGCGCTGAAGGATCTGCCTGCTCAACGCTAGTCCTGTaGTCAAGAGGCTCCTGGGAAGTAGCCGTGCATGGGAGTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AKQGAEGSACSTLVL*SRGSWEVAVHGSGG Trigger: ACCCCCACTCCCATGCACGGCTACTTCCCAGGAGCCTCTTGATCACAGGACTAGCGTTGAGCAGGCAGATCCTTCAGCGCCTTGTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GGCACAGCAGCTTCGGTCTCGGACTCCATGGTGGGCATGAGTAACTaGAAGGCAGGACTGCTTCCTAGAGACTCATCCAGGAGCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTAASVSDSMVGMSN*KAGLLPRDSSRSTD Trigger: GTCTGTGCTCCTGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCACCATGGAGTCCGAGACCGAAGCTGCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | TGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCGTCTGCCTaGCGCAACTTGTGGCCACTCTCAATGGCTGCAAATGCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRPPKQRSKGCSSA*RNLWPLSMAANASS Trigger: TGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | CCCACTCACCCGACTACTTCCTGTGCTGGGCCCCAAAGGGTCAATTaGGGTGATAAGGTCACGTTCTGGGGGTGTCCGAGAGAGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTHPTTSCAGPQRVN*GDKVTFWGCPREIE Trigger: CTCAATCTCTCTCGGACACCCCCAGAACGTGACCTTATCACCCCAATTGACCCTTTGGGGCCCAGCACAGGAAGTAGTCGGGTGAGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 ENSMUST00000126127.8 |
||
| CDS CCA 90 bp | CTGCTCCCTCGGCTGTGCCTTCTTCCTCAGGGCATGCCAGGTGCATaGGGAAGTCCAGGACATTGTTCACAGAGTTGTCGAGTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPRLCLLPQGMPGA*GSPGHCSQSCRVCQ Trigger: CTGGCAAACTCGACAACTCTGTGAACAATGTCCTGGACTTCCCCATGCACCTGGCATGCCCTGAGGAAGAAGGCACAGCCGAGGGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | GAATCTGCCGCACCACGACTGGGATCTCGAGGTCATCACCAGTTGTaGCTGCCTGGCCAACAATCTCCAGTACAACACAGCCCTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESAAPRLGSRGHHQL*LPGQQSPVQHSPQA Trigger: TGCCTGAGGGCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | CAGGAGCACAGACTGGGATCCAGAAGGAATCTGCCGCACCACGACTaGGATCTCGAGGTCATCACCAGTTGTGGCTGCCTGGCCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QEHRLGSRRNLPHHD*DLEVITSCGCLANN Trigger: ATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | TGCAAGGCAGGACTGCTTCCTAGAGACTCATCCAGGAGCACAGACTaGGATCCAGAAGGAATCTGCCGCACCACGACTGGGATCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CKAGLLPRDSSRSTD*DPEGICRTTTGISR Trigger: CCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | GGGCACAGCATAGGTACCAGGAGTACCAGATACTATGGGCATCGTTaGTGGTGGGGGCAAACAAGAATAGCCCGGAGGGGACACAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHSIGTRSTRYYGHR*WWGQTRIARRGHRG Trigger: CCCTCTGTGTCCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACCTATGCTGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | TACCAAGGTGGACACTTTGTGTTTCGGCTGGGGAGATACAGGCACTaGCTGAGCCTCCGGCTTTGTAGGTTCTACTGGTGGAGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: YQGGHFVFRLGRYRH*LSLRLCRFYWWSCG Trigger: CCCGCAGCTCCACCAGTAGAACCTACAAAGCCGGAGGCTCAGCCAGTGCCTGTATCTCCCCAGCCGAAACACAAAGTGTCCACCTTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CCA 90 bp | ACGATGAGGAGGAAGAGGAGGAGGAGGAGGAGGATGAACACCTTCTaGACCGTCCAGAGGAACTGCAGCTGGACCTTCGCCACCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TMRRKRRRRRRMNTF*TVQRNCSWTFATSC Trigger: ACAAGAGGTGGCGAAGGTCCAGCTGCAGTTCCTCTGGACGGTCCAGAAGGTGTTCATCCTCCTCCTCCTCCTCCTCTTCCTCCTCATCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTCGAGGTCATCACCAGTaGTGGCTGCCTGGCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRGHHQ*WLPGQQ Trigger: TTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCG...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTCTTCTGCTTCCGTTaGCCGTTGCTGCCTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVFCFR*PLLPSL Trigger: CAGCGAAGGCAGCAACGGCAAACGGAAGCAGAAGAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGGTACCCAAGGCACATaGCAAGTTGGGGGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPGTQGT*QVGGTA Trigger: TGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | CTGAGAGTTCACCTCTGCAGACACAGTAGACTGTCCTCGAGAAGATaGCCTCAGCCGCCTGGTACAGGCTTCCACACAGGCTGTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVHLCRHSRLSSRR*PQPPGTGFHTGCWL Trigger: CAGCCAACAGCCTGTGTGGAAGCCTGTACCAGGCGGCTGAGGTCATCTTCTCGAGGACAGTCTACTGTGTCTGCAGAGGTGAACTCTCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 90 bp | ATAAGGTCACGTTCTGGGGGTGTCCGAGAGAGATTGAGCAGCTTGTaGAGAGAGGAGCTCTCCCGAGGGGACACGAGCAGCTCTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: IRSRSGGVRERLSSL*REELSRGDTSSSES Trigger: TGATTCAGAGCTGCTCGTGTCCCCTCGGGAGAGCTCCTCTCTGCACAAGCTGCTCAATCTCTCTCGGACACCCCCAGAACGTGACCTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 |
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| CDS GCA 90 bp | GCATCTGCTCCCTCGGCTGTGCCTTCTTCCTCAGGGCATGCCAGGTaGATGGGGAAGTCCAGGACATTGTTCACAGAGTTGTCGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASAPSAVPSSSGHAR*MGKSRTLFTELSSL Trigger: CAAACTCGACAACTCTGTGAACAATGTCCTGGACTTCCCCATGCACCTGGCATGCCCTGAGGAAGAAGGCACAGCCGAGGGAGCAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 90 bp | CCTAGAGACTCATCCAGGAGCACAGACTGGGATCCAGAAGGAATCTaGCGCACCACGACTGGGATCTCGAGGTCATCACCAGTTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRDSSRSTDWDPEGI*RTTTGISRSSPVVA Trigger: AGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTGGATGAGTCTCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 90 bp | AGAAGTTTCCAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACAGAGGAGCTCTCCCGAGGGGACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSFQERRRREVPWRV*KRHLNRGALPRGHE Trigger: CTCGTGTCCCCTCGGGAGAGCTCCTCTGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTGGAAACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150158.8 |
||
| CDS CCA 90 bp | CAGTTCTGTGGGGGTCTCTGGGAGACTAGGCCACTTGCCAACAACTaGGGGCTGAGAATTCCTGTCTTCTGCTTCCGTTTGCCGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFCGGLWETRPLANN*GLRIPVFCFRLPLL Trigger: CAGCAACGGCAAACGGAAGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGAGACCCCCACAGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CCA 90 bp | TGCAAGTTGGGGGCACAGCATAGGTACCAGGAGTACCAGATACTATaGGCATCGTTGGTGGTGGGGGCAAACAAGAATAGCCCGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CKLGAQHRYQEYQIL*ASLVVGANKNSPEG Trigger: CCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACCTATGCTGTGCCCCCAACTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CCA 90 bp | CACCTCAACCCGACTACTTCCTGTGCTGGGCCCCAAAGGGTCAATTaGGGTGATAAGGTCACGTTCTGGGGGTGTCCGAGAGAGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLNPTTSCAGPQRVN*GDKVTFWGCPREIE Trigger: CTCAATCTCTCTCGGACACCCCCAGAACGTGACCTTATCACCCCAATTGACCCTTTGGGGCCCAGCACAGGAAGTAGTCGGGTTGAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | CAACTTCAGGCACAGCAGCTTCGGTCTCGGACTCCATGGTGGGCATaGGTAACTGCAAGGCAGGACTGCTTCCTAGAGACTCATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QLQAQQLRSRTPWWA*VTARQDCFLETHPG Trigger: TCCTGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCACCATGGAGTCCGAGACCGAAGCTGCTGTGCCTGAAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 90 bp | AAGGGCAGCAGCCTCTCTCTGAAGCTCTTCCTGGGGCTGTTTCTGTaGACTGCCTGCCTGAGAGTTCACCTCTGCAGACACAGTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLSLKLFLGLFL*TACLRVHLCRHSRL Trigger: CAGTCTACTGTGTCTGCAGAGGTGAACTCTCAGGCAGGCAGTTCACAGAAACAGCCCCAGGAAGAGCTTCAGAGAGAGGCTGCTGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | AGAAGTTTCCAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACCCGACTACTTCCTGTGCTGGGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSFQERRRREVPWRV*KRHLNPTTSCAGPQ Trigger: TTGGGGCCCAGCACAGGAAGTAGTCGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTGGAAACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS GCA 90 bp | AGAAGTTTCCAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACCCCACTCACCCGACTACTTCCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSFQERRRREVPWRV*KRHLNPTHPTTSCA Trigger: AGCACAGGAAGTAGTCGGGTGAGTGGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTGGAAACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | CTTAGACGGGCTGGATGGACAGCAGGTAGCTTTGCAACAGCGCTCTaGTTTGGCACAGGGACAGACTTGATAGCTGTAGAGATGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRAGWTAGSFATAL*FGTGTDLIAVEMGF Trigger: GAAGCCCATCTCTACAGCTATCAAGTCTGTCCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCATCCAGCCCGTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 90 bp | GGGAATAGCCACTGCAGGTTCAATTCCTTTCTTGTCAGCCAGGACTaGGCTAGTCAGGTTTGGGCCTACTGGGAGAGAACCAACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GNSHCRFNSFLVSQD*ASQVWAYWERTNQL Trigger: GAGCTGGTTGGTTCTCTCCCAGTAGGCCCAAACCTGACTAGCCCAGTCCTGGCTGACAAGAAAGGAATTGAACCTGCAGTGGCTATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGGTTCAATTCCTTTCTaGTCAGCCAGGACTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPGSIPF*SARTGL Trigger: TAGCCCAGTCCTGGCTGACAAGAAAGGAATTGAACC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS GCA 90 bp | AGCTGTAAGGTGAAACTGGTGCAGGAGGGGGTACCCAAGGCACATTaGAAGTTGGGGGCACAGCATAGGTACCAGGAGTACCAGATACTA | + |
|
Preference number: 5 (lower is better) Translates to: SCKVKLVQEGVPKAH*KLGAQHRYQEYQIL Trigger: TAGTATCTGGTACTCCTGGTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTTACAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GGGCTGCTCGTCTGCCTGCCGCAACTTGTGGCCACTCTCAATGGCTaGAAATGCCTCTTCAGCATAACGGTAAGTGACGAAACCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLLVCLPQLVATLNG*KCLFSITVSDETIV Trigger: AACTATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCTGGAAGTCCAGGAGGTaGCAAAGGAGGTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVWKSRR*QRRWGQ Trigger: CTGCCCCCACCTCCTTTGCAACCTCCTGGACTTCCA...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS GCA 90 bp | CTCGTCTGCCTGCCGCAACTTGTGGCCACTCTCAATGGCTGCAAATaGCTCTTCAGCATAACGGTAAGTGACGAAACCATAGTTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LVCLPQLVATLNGCK*LFSITVSDETIVVT Trigger: GGTGACAACTATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 90 bp | GATCAAAGTCTTCCCGATTGGAGTCAAGGTCAGAGTAACTCCTCTTaGAGAACTGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DQSLPDWSQGQSNSS*RTAFGPQSRDQRAA Trigger: AGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCAGTTCTGCAAGAGGAGTTACTCTGACCTTGACTCCAATCGGGAAGACTTTGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTTTCTCAGAATCTGCATaGTCCAAGATCTCCGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPFSESA*SKISVR Trigger: TCTGACGGAGATCTTGGACAATGCAGATTCTGAGAA...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGGACCTACAACATCCTaGCCTTCAGGGCTGACGACC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVGPTTS*PSGLTT Trigger: GGTCGTCAGCCCTGAAGGCAAGGATGTTGTAGGTCC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTGTTGAAACCATAAGTTaGCTTGCAGATGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPVETIS*LADGSG Trigger: TCCTGAGCCATCTGCAAGCAAACTTATGGTTTCAAC...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGACACCTCCAGAGAAAATGGGTAGGGGAGGAATGCCCAGGGTTACCTAGAGGACACTCCTTTTaGGCTTCTGACTTCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGHLQRKWVGEECPGLPRGHSF*ASDFSN Trigger: GTTTGAGAAGTCAGAAGCCAAAAAGGAGTGTCCTCT...AGGTAACCCTGGGCATTCCTCCCCTACCCATTTTCTCTGGAGGTGTCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS CCA 90 bp | TCAAAAACTACACCCTCAGTAGACAAAGTCGGTGGAGCCTTGATCTaGGGACTCTGTACCAAGGTGGACACTTTGTGTTTCGGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKTTPSVDKVGGALI*GLCTKVDTLCFGWG Trigger: TCCCCAGCCGAAACACAAAGTGTCCACCTTGGTACAGAGTCCCCAGATCAAGGCTCCACCGACTTTGTCTACTGAGGGTGTAGTTTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGGTGTCCGAGAGAGATaGAGCAGCTTGTGCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVGVRER*SSLCRE Trigger: CTCTCTGCACAAGCTGCTCAATCTCTCTCGGACACC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCCAGCTGCCACTGTGTTaGCTAGGACATCAGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVQLPLC*LGHQLE Trigger: CTCCAGCTGATGTCCTAGCAAACACAGTGGCAGCTG...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGGACAGCAGGTAGCTTaGCAACAGCGCTCTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVGQQVA*QQRSAL Trigger: CAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS GCA 90 bp | GAAGCCGGGAGAGGACACTCCTTTTTGGCTTCTGACTTCTCAAACTaGTCCAACAGACTCGACAGATCTGATGCTTCGATCCCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EAGRGHSFLASDFSN*SNRLDRSDASIPIS Trigger: TGAGATTGGGATCGAAGCATCAGATCTGTCGAGTCTGTTGGAGCAGTTTGAGAAGTCAGAAGCCAAAAAGGAGTGTCCTCTCCCGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGGCACATTGCAAGTaGGGGGCACAGCATAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVKAHCK*GAQHRY Trigger: GTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAGATGGGCTTCTCCTTaGGTCTGTTCTCCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVRWASP*VCSPGS Trigger: AGACCCAGGAGAACAGACCAAAGGAGAAGCCCATCT...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTTACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCGCTGTTGGCTGTTCCTaGTTCTTCTTCTTCCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPEVLLGLFQQCIKVAVGCS*FFFFLP Trigger: GGGTAGGAAGAAGAAGAACAAGGAACAGCCAACAGC...GACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | ACAGGTTCTCAGAATCTGCATTGTCCAAGATCTCCGTCAGAGCTGTaGGCAGCGACATTTCATTCTGGTCCTCCAGAGATAATCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGSQNLHCPRSPSEL*AATFHSGPPEIICS Trigger: AGAGCAGATTATCTCTGGAGGACCAGAATGAAATGTCGCTGCTCACAGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 ENSMUST00000135327.8 ENSMUST00000150158.8 |
||
| CDS CCA 90 bp | TTGTCCAAGATCTCCGTCAGAGCTGTGAGCAGCGACATTTCATTCTaGTCCTCCAGAGATAATCTGCTCTGCTCTCCAAAATCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LSKISVRAVSSDISF*SSRDNLLCSPKSSM Trigger: CATTGAGGATTTTGGAGAGCAGAGCAGATTATCTCTGGAGGACCAGAATGAAATGTCGCTGCTCACAGCTCTGACGGAGATCTTGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062322.11 |
||
| CDS CCA 90 bp | TTGTCCAAGATCTCCGTCAGAGCTGTGAGCAGCGACATTTCATTCTaGTCCTCCAGAGATAATCTGCTCTCTCCAAAATCCTCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSKISVRAVSSDISF*SSRDNLLSPKSSMR Trigger: CCTCATTGAGGATTTTGGAGAGAGCAGATTATCTCTGGAGGACCAGAATGAAATGTCGCTGCTCACAGCTCTGACGGAGATCTTGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 ENSMUST00000135327.8 ENSMUST00000150158.8 |
||
| CDS-3UTR CAA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAGAGAGATTGAGCAGCTaGTGCAGAGAGGAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLLRFFWACFNNVSKSSEERLSS*CREELS Trigger: GGAGAGCTCCTCTCTGCACAAGCTGCTCAATCTCTC...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | GGCCACTCTCAATGGCTGCAAATGCCTCTTCAGCATAACGGTAAGTaGCGAAACCATAGTTGTCACCTTGGACACGAAAATGAATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GHSQWLQMPLQHNGK*RNHSCHLGHENEWY Trigger: GTACCATTCATTTTCGTGTCCAAGGTGACAACTATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS-3UTR CAA 90 bp | TACCTCCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTGAAACCAAGGTGGACACTTaGTGTTTCGGCTGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YLLRFFWACFNNVSKSSETKVDT*CFGWGD Trigger: ATCTCCCCAGCCGAAACACAAAGTGTCCACCTTGGT...TTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS TCA 90 bp | CCTGAGGTTCTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTaGATCGAATTTGCTCTTTACAGGAGCAGGATCAAAGTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PEVLLGLFQQCIKVK*IEFALYRSRIKVFP Trigger: CGGGAAGACTTTGATCCTGCTCCTGTAAAGAGCAAATTCGATTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAGAACCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | CGCGGCGCTCACGGAGCCCCCGGTCCCATACGGCGCTaGGCTTCGACTCGCCCAACTGCCGCCACGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGAHGAPGPIRR*ASTRPTAATHS Trigger: GGAGTGCGTGGCGGCAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACCGGGGGCTCCGTGAGCGCCGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GCGGCGCTCACGGAGCCCCCGGTCCCATACGGCGCTTaGCTTCGACTCGCCCAACTGCCGCCACGCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AALTEPPVPYGA*LRLAQLPPRTP Trigger: TGGAGTGCGTGGCGGCAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACCGGGGGCTCCGTGAGCGCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CGGTCCCATACGGCGCTTGGCTTCGACTCGCCCAACTaGCGCCACGCACTCCACCGCCAGGGTCAGGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSHTALGFDSPN*RHALHRQGQDP Trigger: CGGGTCCTGACCCTGGCGGTGGAGTGCGTGGCGGCAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | ACGAGGACGCTTCACTGGTCCGGCTGGACCCAGAGCTaGCAGAACGGCTACTGCGGCCACGGCGGCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRTLHWSGWTQS*QNGYCGHGGLA Trigger: GGCAAGGCCGCCGTGGCCGCAGTAGCCGTTCTGTCAGCTCTGGGTCCAGCCGGACCAGTGAAGCGTCCTCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | AGGAGGTGGGGGCAGGCGGGGGACTCCATGGCCACCTaGAGGAAGAGGAAGCAAAGGCGGTACACTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRWGQAGDSMAT*RKRKQRRYTRR Trigger: CCTCCGAGTGTACCGCCTTTGCTTCCTCTTCCTTCAGGTGGCCATGGAGTCCCCCGCCTGCCCCCACCTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | CACTCGGAGGGAAAGGAGGCAAAGGAGCGGGCACCGTaGACGGGATGGGTCCAGCAGGAGACACAGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSEGKEAKERAP*TGWVQQETQTA Trigger: TGCCGTCTGTGTCTCCTGCTGGACCCATCCCGTCCACGGTGCCCGCTCCTTTGCCTCCTTTCCCTCCGAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | CTCACTCAAGGAGGAGATGCTCTCGTCACCAGGGGCTaGCGCTGGCGCATCTGCTCCCTCGGCTGTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTQGGDALVTRG*RWRICSLGCAF Trigger: GAAGGCACAGCCGAGGGAGCAGATGCGCCAGCGTCAGCCCCTGGTGACGAGAGCATCTCCTCCTTGAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CTGACAAAGCTAGAGTCATTCCCTTCCTCATGGACCTaGTCCGCGGCGCTCACGGAGCCCCCGGTCCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LTKLESFPSSWT*SAALTEPPVPY Trigger: GTATGGGACCGGGGGCTCCGTGAGCGCCGCGGAGCAGGTCCATGAGGAAGGGAATGACTCTAGCTTTGTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | GATGCATGGCCCGAACCAGCTCACTCAAGGAGGAGATaGTCTCGTCACCAGGGGCTGACGCTGGCGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: DAWPEPAHSRRR*SRHQGLTLAHL Trigger: CAGATGCGCCAGCGTCAGCCCCTGGTGACGAGAGCATCTCCTCCTTGAGTGAGCTGGTTCGGGCCATGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GAAGCACATCTTCAGGAGGACCAGCGGGATCACCACTaGGTTCCACGGGGGTCGGGGGAACAGCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAHLQEDQRDHH*VPRGSGEQLFQ Trigger: CTGGAAGAGCTGTTCCCCCGACCCCCGTGGAACCCAGTGGTGATCCCGCTGGTCCTCCTGAAGATGTGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | CCTGCACCACATCCTCAGGACCCTGAGCACGTGGGGTaGGCAGGAAGGACAGCTTCCTTAGACGGGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPHPQDPEHVG*AGRTASLDGLD Trigger: ATCCAGCCCGTCTAAGGAAGCTGTCCTTCCTGCCCACCCCACGTGCTCAGGGTCCTGAGGATGTGGTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | TGCAAGGGGACACAGAGGGAGACCGGCTTCTGGAACTaGACGATGAGGAGGAAGAGGAGGAGGAGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CKGTQRETGFWN*TMRRKRRRRRR Trigger: CCTCCTCCTCCTCCTCCTCTTCCTCCTCATCGTGCAGTTCCAGAAGCCGGTCTCCCTCTGTGTCCCCTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | TCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCGTCTaGCTGCCGCAACTTGTGGCCACTCTCAATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPKAEIKGLLV*LPQLVATLNGC Trigger: GCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GAAAGACTGACAAAGCTAGAGTCATTCCCTTCCTCATaGACCTGCTCCGCGGCGCTCACGGAGCCCCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERLTKLESFPSS*TCSAALTEPPV Trigger: GACCGGGGGCTCCGTGAGCGCCGCGGAGCAGGTCCATGAGGAAGGGAATGACTCTAGCTTTGTCAGTCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | TCACGTTCTGGGGGTGTCCGAGAGAGATTGAGCAGCTaGTGCAGAGAGGAGCTCTCCCGAGGGGACACGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSGGVRERLSS*CREELSRGDTS Trigger: GCTCGTGTCCCCTCGGGAGAGCTCCTCTCTGCACAAGCTGCTCAATCTCTCTCGGACACCCCCAGAACGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 |
||
| CDS CAA 90 bp | CTAGGGCTGTGGGCCCCTTCTTGGAGGCAGGCTGTAGCTGGAGGTTaGGCCTCTGTAATTCCTTCAGGCTTCAGGGTTCCCTCTTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGLWAPSWRQAVAGG*ASVIPSGFRVPSWA Trigger: CGCCCAAGAGGGAACCCTGAAGCCTGAAGGAATTACAGAGGCCAAACCTCCAGCTACAGCCTGCCTCCAAGAAGGGGCCCACAGCCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | GGCGCTGAAGGATCTGCCTGCTCAACGCTAGTCCTGTaGTCAAGAGGCTCCTGGGAAGTAGCCGTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAEGSACSTLVL*SRGSWEVAVHG Trigger: CCCATGCACGGCTACTTCCCAGGAGCCTCTTGATCACAGGACTAGCGTTGAGCAGGCAGATCCTTCAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | AACTGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTaGTCGTCTGCCTGCCGCAACTTGTGGCCACTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NCLRPPKQRSKG*SSACRNLWPLS Trigger: TGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | AGGAAGAGGAGGAGGAGGAGGAGGATGAACACCTTCTaGACCGTCCAGAGGAACTGCAGCTGGACCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKRRRRRRMNTF*TVQRNCSWTFA Trigger: GGCGAAGGTCCAGCTGCAGTTCCTCTGGACGGTCCAGAAGGTGTTCATCCTCCTCCTCCTCCTCCTCTTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 90 bp | GTGATAAGGTCACGTTCTGGGGGTGTCCGAGAGAGATTGAGCAGCTaGTGCAGAGAGGAGCTCTCCCGAGGGGACACGAGCAGCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VIRSRSGGVRERLSS*CREELSRGDTSSSE Trigger: TTCAGAGCTGCTCGTGTCCCCTCGGGAGAGCTCCTCTCTGCACAAGCTGCTCAATCTCTCTCGGACACCCCCAGAACGTGACCTTATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 |
||
| CDS TCA 72 bp | GTCCCTCAAGTTCACCCTCAAGGGATGCCAAGTGGGTaGGGTTGGGCAAGCAGTAGGGATGCATGGCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPQVHPQGMPSG*GWASSRDAWPE Trigger: TTCGGGCCATGCATCCCTACTGCTTGCCCAACCTCACCCACTTGGCATCCCTTGAGGGTGAACTTGAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | CACCTCTGCAGACACAGTAGACTGTCCTCGAGAAGATaGCCTCAGCCGCCTGGTACAGGCTTCCACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLCRHSRLSSRR*PQPPGTGFHTG Trigger: GCCTGTGTGGAAGCCTGTACCAGGCGGCTGAGGTCATCTTCTCGAGGACAGTCTACTGTGTCTGCAGAGGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | AGGGGGAGTCCTAGCGTTCATTTCACTCCGGCAGGGTaGAGCCTCAGGAGACAGCAAGGTGGATGGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RGSPSVHFTPAG*SLRRQQGGWGK Trigger: TTTGCCCCATCCACCTTGCTGTCTCCTGAGGCTTCACCCTGCCGGAGTGAAATGAACGCTAGGACTCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACAGAGGAGCTCTCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QERRRREVPWRV*KRHLNRGALPR Trigger: CCTCGGGAGAGCTCCTCTGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150158.8 |
||
| CDS CCA 72 bp | CCGACTACTTCCTGTGCTGGGCCCCAAAGGGTCAATTaGGGTGATAAGGTCACGTTCTGGGGGTGTCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTTSCAGPQRVN*GDKVTFWGCPR Trigger: TCTCGGACACCCCCAGAACGTGACCTTATCACCCCAATTGACCCTTTGGGGCCCAGCACAGGAAGTAGTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 |
||
| CDS CCA 72 bp | AGACTGGGATCCAGAAGGAATCTGCCGCACCACGACTaGGATCTCGAGGTCATCACCAGTTGTGGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLGSRRNLPHHD*DLEVITSCGCL Trigger: CAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GGACTGCTTCCTAGAGACTCATCCAGGAGCACAGACTaGGATCCAGAAGGAATCTGCCGCACCACGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLPRDSSRSTD*DPEGICRTTTG Trigger: CCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTGGATGAGTCTCTAGGAAGCAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | AAGGCAAGGGATATCTGCCAGTTCTGTGGGGGTCTCTaGGAGACTAGGCCACTTGCCAACAACTGGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KARDICQFCGGL*ETRPLANNWGL Trigger: CAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGAGACCCCCACAGAACTGGCAGATATCCCTTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | AGAAACAGTAGACCAAAAGGGAGGCTGTTGCAGCCCTaGGCCCCACCCAAGGGATCCATAGGCACAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RNSRPKGRLLQP*APPKGSIGTAG Trigger: TCCAGCTGTGCCTATGGATCCCTTGGGTGGGGCCCAGGGCTGCAACAGCCTCCCTTTTGGTCTACTGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | AGGGCTGTGGGCCCCTTCTTGGAGGCAGGCTGTAGCTaGAGGTTTGGCCTCTGTAATTCCTTCAGGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAVGPFLEAGCS*RFGLCNSFRLQ Trigger: CTGAAGCCTGAAGGAATTACAGAGGCCAAACCTCCAGCTACAGCCTGCCTCCAAGAAGGGGCCCACAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | GTGATAAGGTCACGTTCTGGGGGTGTCCGAGAGAGATaGAGCAGCTTGTGCAGAGAGGAGCTCTCCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VIRSRSGGVRER*SSLCREELSRG Trigger: CCCTCGGGAGAGCTCCTCTCTGCACAAGCTGCTCAATCTCTCTCGGACACCCCCAGAACGTGACCTTATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 |
||
| CDS CAA 72 bp | GCCGCACCACGACTGGGATCTCGAGGTCATCACCAGTaGTGGCTGCCTGGCCAACAATCTCCAGTACAACAC | + |
|
Preference number: 6 (lower is better) Translates to: AAPRLGSRGHHQ*WLPGQQSPVQH Trigger: GTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | TGGGCCCCTTCTTGGAGGCAGGCTGTAGCTGGAGGTTaGGCCTCTGTAATTCCTTCAGGCTTCAGGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WAPSWRQAVAGG*ASVIPSGFRVP Trigger: GGGAACCCTGAAGCCTGAAGGAATTACAGAGGCCAAACCTCCAGCTACAGCCTGCCTCCAAGAAGGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 90 bp | AAGGAATCTGCCGCACCACGACTGGGATCTCGAGGTCATCACCAGTaGTGGCTGCCTGGCCAACAATCTCCAGTACAACACAGCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KESAAPRLGSRGHHQ*WLPGQQSPVQHSPQ Trigger: CTGAGGGCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | GCACAGCAGCTTCGGTCTCGGACTCCATGGTGGGCATaGGTAACTGCAAGGCAGGACTGCTTCCTAGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: AQQLRSRTPWWA*VTARQDCFLET Trigger: AGTCTCTAGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCACCATGGAGTCCGAGACCGAAGCTGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | CTGTCTTCTGCTTCCGTTTGCCGTTGCTGCCTTCGCTaGCGGTACTCAGATAGGCTGAGAGGCCGAGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSASVCRCCLR*RYSDRLRGRGL Trigger: CAAACCTCGGCCTCTCAGCCTATCTGAGTACCGTCAGCGAAGGCAGCAACGGCAAACGGAAGCAGAAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | CCCAAGGGATCCATAGGCACAGCTGGAGCTGTAAGGTaGAACTGGTGCAGGAGGGGGTACCCAAGGCACATT | + |
|
Preference number: 6 (lower is better) Translates to: PKGSIGTAGAVR*NWCRRGYPRHI Trigger: AATGTGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTTACAGCTCCAGCTGTGCCTATGGATCCCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACCCCACTCACCCGACTACT | + |
|
Preference number: 6 (lower is better) Translates to: QERRRREVPWRV*KRHLNPTHPTT Trigger: AGTAGTCGGGTGAGTGGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | AGCATCAGCCTGTCCCTCAAGTTCACCCTCAAGGGATaGCAAGTGGGTGAGGTTGGGCAAGCAGTAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SISLSLKFTLKG*QVGEVGQAVGM Trigger: CATCCCTACTGCTTGCCCAACCTCACCCACTTGGCATCCCTTGAGGGTGAACTTGAGGGACAGGCTGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CACGACTGGGATCTCGAGGTCATCACCAGTTGTGGCTaGCTGGCCAACAATCTCCAGTACAACACAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HDWDLEVITSCG*LANNLQYNTAL Trigger: GAGGGCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | TCATCCAGGAGCACAGACTGGGATCCAGAAGGAATCTaGCGCACCACGACTGGGATCTCGAGGTCATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSTDWDPEGI*RTTTGISRSSP Trigger: TGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGTCTGTGCTCCTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | GCTTCGGTCTCGGACTCCATGGTGGGCATGAGTAACTaGAAGGCAGGACTGCTTCCTAGAGACTCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASVSDSMVGMSN*KAGLLPRDSSR Trigger: CCTGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCACCATGGAGTCCGAGACCGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GCACCACGACTGGGATCTCGAGGTCATCACCAGTTGTaGCTGCCTGGCCAACAATCTCCAGTACAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: APRLGSRGHHQL*LPGQQSPVQHS Trigger: GCTGTGTTGTACTGGAGATTGTTGGCCAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GGGGGTCTCTGGGAGACTAGGCCACTTGCCAACAACTaGGGGCTGAGAATTCCTGTCTTCTGCTTCCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLWETRPLANN*GLRIPVFCFRL Trigger: CAAACGGAAGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGAGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GGTACCAGGAGTACCAGATACTATGGGCATCGTTGGTaGTGGGGGCAAACAAGAATAGCCCGGAGGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GTRSTRYYGHRW*WGQTRIARRGH Trigger: GTGTCCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | TGGTGCAGGAGGGGGTACCCAAGGCACATTGCAAGTTaGGGGCACAGCATAGGTACCAGGAGTACCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: WCRRGYPRHIAS*GHSIGTRSTRY Trigger: GTATCTGGTACTCCTGGTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GTGGGCAGGAAGGACAGCTTCCTTAGACGGGCTGGATaGACAGCAGGTAGCTTTGCAACAGCGCTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VGRKDSFLRRAG*TAGSFATALCF Trigger: AAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCATCCAGCCCGTCTAAGGAAGCTGTCCTTCCTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | CTGGTGCAGGAGGGGGTACCCAAGGCACATTGCAAGTaGGGGGCACAGCATAGGTACCAGGAGTACCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LVQEGVPKAHCK*GAQHRYQEYQI Trigger: TATCTGGTACTCCTGGTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | GCTTCCTTAGACGGGCTGGATGGACAGCAGGTAGCTTaGCAACAGCGCTCTGCTTTGGCACAGGGACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASLDGLDGQQVA*QQRSALAQGQT Trigger: AGTCTGTCCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCATCCAGCCCGTCTAAGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | AGCCTCTCTCTGAAGCTCTTCCTGGGGCTGTTTCTGTaGACTGCCTGCCTGAGAGTTCACCTCTGCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLKLFLGLFL*TACLRVHLCRH Trigger: GTGTCTGCAGAGGTGAACTCTCAGGCAGGCAGTTCACAGAAACAGCCCCAGGAAGAGCTTCAGAGAGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | TCTGGGAGACTAGGCCACTTGCCAACAACTGGGGGCTaGGAATTCCTGTCTTCTGCTTCCGTTTGCCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRLGHLPTTGG*EFLSSASVCRC Trigger: GCAACGGCAAACGGAAGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | CACGGGGGTCGGGGGAACAGCTCTTCCAGTAGGGACTaGAGACAACGGAGGTGGAGAAACAGTAGACCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HGGRGNSSSSRD*RQRRWRNSRPK Trigger: TTTTGGTCTACTGTTTCTCCACCTCCGTTGTCTTCAGTCCCTACTGGAAGAGCTGTTCCCCCGACCCCCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | GAGCCCAATGACAACACAGGCTTGATGGTGATGTCCTaGTGGCGCTTGACATTCCATCGGGAGCCCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EPNDNTGLMVMS*WRLTFHREPTS Trigger: AGAGGTGGGCTCCCGATGGAATGTCAAGCGCCATCAGGACATCACCATCAAGCCTGTGTTGTCATTGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CTTGCCAACAACTGGGGGCTGAGAATTCCTGTCTTCTaGTTCCGTTTGCCGTTGCTGCCTTCGCTGACGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LANNWGLRIPVF*FRLPLLPSLTV Trigger: TACCGTCAGCGAAGGCAGCAACGGCAAACGGAAGCAGAAGACAGGAATTCTCAGCCCCCAGTTGTTGGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | CAAGAAAGGAGGCGGAGAGAAGTCCCATGGAGAGTCTaGAAGAGGCACCTCAACCCGACTACTTCCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QERRRREVPWRV*KRHLNPTTSCA Trigger: AGCACAGGAAGTAGTCGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099392.10 |
||
| CDS CCA 72 bp | TCCTTTCTTGTCAGCCAGGACTGGGCTAGTCAGGTTTaGGCCTACTGGGAGAGAACCAACCAGCTCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SFLVSQDWASQV*AYWERTNQLCT Trigger: GGTACAGAGCTGGTTGGTTCTCTCCCAGTAGGCCCAAACCTGACTAGCCCAGTCCTGGCTGACAAGAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | ACCAGGAGTACCAGATACTATGGGCATCGTTGGTGGTaGGGGCAAACAAGAATAGCCCGGAGGGGACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TRSTRYYGHRWW*GQTRIARRGHR Trigger: TCTGTGTCCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | AGATCAAAGGGCTGCTCGTCTGCCTGCCGCAACTTGTaGCCACTCTCAATGGCTGCAAATGCCTCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSKGCSSACRNL*PLSMAANASSA Trigger: TGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | CATAGGTACCAGGAGTACCAGATACTATGGGCATCGTaGGTGGTGGGGGCAAACAAGAATAGCCCGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRYQEYQILWAS*VVGANKNSPEG Trigger: CCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACCTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | TTCAGGGTTCCCTCTTGGGCGGTGGATTTAGGAGATTaGGCTTTCGCCAAGAGTGAGACAGCAGCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FRVPSWAVDLGD*AFAKSETAARG Trigger: ACCCCTGGCTGCTGTCTCACTCTTGGCGAAAGCCAAATCTCCTAAATCCACCGCCCAAGAGGGAACCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | CCTTCTGTAGCACTCTCTGCCTTTGGTAATGGTCATTaGCACGGTAAGAGCTGTACCGCCGCCTCCGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSVALSAFGNGH*HGKSCTAASGH Trigger: GTGACCGGAGGCGGCGGTACAGCTCTTACCGTGCAAATGACCATTACCAAAGGCAGAGAGTGCTACAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 72 bp | CAGAGATCAAAGGGCTGCTCGTCTGCCTGCCGCAACTaGTGGCCACTCTCAATGGCTGCAAATGCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRSKGCSSACRN*WPLSMAANASS Trigger: TGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCAGCCCTTTGATCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS CAA 90 bp | AAGGTGAAACTGGTGCAGGAGGGGGTACCCAAGGCACATTGCAAGTaGGGGGCACAGCATAGGTACCAGGAGTACCAGATACTATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KVKLVQEGVPKAHCK*GAQHRYQEYQILWA Trigger: TGCCCATAGTATCTGGTACTCCTGGTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CAA 90 bp | CCTTCAGGCTTCAGGGTTCCCTCTTGGGCGGTGGATTTAGGAGATTaGGCTTTCGCCAAGAGTGAGACAGCAGCCAGGGGTTTCCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGFRVPSWAVDLGD*AFAKSETAARGFHN Trigger: GTTATGGAAACCCCTGGCTGCTGTCTCACTCTTGGCGAAAGCCAAATCTCCTAAATCCACCGCCCAAGAGGGAACCCTGAAGCCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
||
| CDS TCA 72 bp | AGCTCTTCCTGGGGCTGTTTCTGTGAACTGCCTGCCTaGGAGTTCACCTCTGCAGACACAGTAGACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSWGCFCELPA*EFTSADTVDCP Trigger: AGGACAGTCTACTGTGTCTGCAGAGGTGAACTCTCAGGCAGGCAGTTCACAGAAACAGCCCCAGGAAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS GCA 72 bp | GCTGGATGGACAGCAGGTAGCTTTGCAACAGCGCTCTaGTTTGGCACAGGGACAGACTTGATAGCTGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGWTAGSFATAL*FGTGTDLIAVE Trigger: CTCTACAGCTATCAAGTCTGTCCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCATCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | TACTCAGATAGGCTGAGAGGCCGAGGTTTGGCTTCCTaGGTTGTAGCGCTGGTACTACCTTCCACCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YSDRLRGRGLAS*VVALVLPSTFR Trigger: TCTGAAGGTGGAAGGTAGTACCAGCGCTACAACCCAGGAAGCCAAACCTCGGCCTCTCAGCCTATCTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | ATAGGTACCAGGAGTACCAGATACTATGGGCATCGTTaGTGGTGGGGGCAAACAAGAATAGCCCGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IGTRSTRYYGHR*WWGQTRIARRG Trigger: TCCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | GGGGCACAGCATAGGTACCAGGAGTACCAGATACTATaGGCATCGTTGGTGGTGGGGGCAAACAAGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAQHRYQEYQIL*ASLVVGANKNS Trigger: GCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTCCTGGTACCTATGCTGTGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
||
| CDS CCA 72 bp | TCTGGGGCTTGTAACCGGTCTAAGGGCTTCTTCTCCTaGGGAATGTCAATGCTGCCTGAGTTTCCTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGACNRSKGFFS*GMSMLPEFPTA Trigger: GGCTGTAGGAAACTCAGGCAGCATTGACATTCCCCAGGAGAAGAAGCCCTTAGACCGGTTACAAGCCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062322.11 |
||
| CDS CAA 72 bp | TCAGGGCATGCCAGGTGCATGGGGAAGTCCAGGACATaGTTCACAGAGTTGTCGAGTTTGCCAGCAAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGHARCMGKSRT*FTELSSLPASI Trigger: GATGCTTGCTGGCAAACTCGACAACTCTGTGAACAATGTCCTGGACTTCCCCATGCACCTGGCATGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 90 bp | GCAGGTAGCTTTGCAACAGCGCTCTGCTTTGGCACAGGGACAGACTaGATAGCTGTAGAGATGGGCTTCTCCTTTGGTCTGTTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGSFATALCFGTGTD*IAVEMGFSFGLFSW Trigger: CCAGGAGAACAGACCAAAGGAGAAGCCCATCTCTACAGCTATCAAGTCTGTCCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 72 bp | GTCTGCCTGCCGCAACTTGTGGCCACTCTCAATGGCTaGAAATGCCTCTTCAGCATAACGGTAAGTGACGAA | + |
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Preference number: 6 (lower is better) Translates to: VCLPQLVATLNG*KCLFSITVSDE Trigger: TTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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| CDS GCA 72 bp | CTTCCCGATTGGAGTCAAGGTCAGAGTAACTCCTCTTaGAGAACTGCCTTCGGCCCCCAAAGCAGAGATCAA | + |
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Preference number: 6 (lower is better) Translates to: LPDWSQGQSNSS*RTAFGPQSRDQ Trigger: TTGATCTCTGCTTTGGGGGCCGAAGGCAGTTCTGCAAGAGGAGTTACTCTGACCTTGACTCCAATCGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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| CDS CAA 72 bp | GAAGTGGGAATAGCCACTGCAGGTTCAATTCCTTTCTaGTCAGCCAGGACTGGGCTAGTCAGGTTTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EVGIATAGSIPF*SARTGLVRFGP Trigger: AGGCCCAAACCTGACTAGCCCAGTCCTGGCTGACAAGAAAGGAATTGAACCTGCAGTGGCTATTCCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 90 bp | AAGTTATCCGAAGTGGGAATAGCCACTGCAGGTTCAATTCCTTTCTaGTCAGCCAGGACTGGGCTAGTCAGGTTTGGGCCTACTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: KLSEVGIATAGSIPF*SARTGLVRFGPTGR Trigger: TCTCCCAGTAGGCCCAAACCTGACTAGCCCAGTCCTGGCTGACAAGAAAGGAATTGAACCTGCAGTGGCTATTCCCACTTCGGATAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 90 bp | GACTCCTCAAAAACTACACCCTCAGTAGACAAAGTCGGTGGAGCCTaGATCTGGGGACTCTGTACCAAGGTGGACACTTTGTGTTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: DSSKTTPSVDKVGGA*IWGLCTKVDTLCFG Trigger: GCCGAAACACAAAGTGTCCACCTTGGTACAGAGTCCCCAGATCAAGGCTCCACCGACTTTGTCTACTGAGGGTGTAGTTTTTGAGGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 72 bp | CAGGGTCATTTGGAACAGGGTCAGCTGCCACTGTGTTaGCTAGGACATCAGCTGGAGACAAGTTATCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: QGHLEQGQLPLC*LGHQLETSYPK Trigger: CTTCGGATAACTTGTCTCCAGCTGATGTCCTAGCAAACACAGTGGCAGCTGACCCTGTTCCAAATGACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 72 bp | AGGAATGGTGTCAAAAGGGGACAGGTTCTCAGAATCTaGATTGTCCAAGATCTCCGTCAGAGCTGTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RNGVKRGQVLRI*IVQDLRQSCEQ Trigger: CTGCTCACAGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTGTCCCCTTTTGACACCATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 ENSMUST00000126127.8 ENSMUST00000135327.8 ENSMUST00000150158.8 |
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| CDS GCA 72 bp | AGCTGGAGACAAGTTATCCGAAGTGGGAATAGCCACTaGAGGTTCAATTCCTTTCTTGTCAGCCAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SWRQVIRSGNSH*RFNSFLVSQDW Trigger: CCAGTCCTGGCTGACAAGAAAGGAATTGAACCTGCAGTGGCTATTCCCACTTCGGATAACTTGTCTCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 72 bp | CTGCCGCAACTTGTGGCCACTCTCAATGGCTGCAAATaGCTCTTCAGCATAACGGTAAGTGACGAAACCATA | + |
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Preference number: 6 (lower is better) Translates to: LPQLVATLNGCK*LFSITVSDETI Trigger: TATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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| CDS CCA 72 bp | AGGGGAAACAGGATTAGAACCCACAGACACAGTCTCTaGTACAGCTATAGGGCTTCTCTGTGGAGCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGNRIRTHRHSL*YSYRASLWSCL Trigger: AAGACAGCTCCACAGAGAAGCCCTATAGCTGTACCAGAGACTGTGTCTGTGGGTTCTAATCCTGTTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 72 bp | AAAACTACACCCTCAGTAGACAAAGTCGGTGGAGCCTaGATCTGGGGACTCTGTACCAAGGTGGACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: KTTPSVDKVGGA*IWGLCTKVDTL Trigger: CAAAGTGTCCACCTTGGTACAGAGTCCCCAGATCAAGGCTCCACCGACTTTGTCTACTGAGGGTGTAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS TCA 72 bp | TCACCTTCAACAGAGTCAACAGGCATGGAGTCAGCTTaGGCAGAGTCATTTAATGAGAGAGTGGGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPSTESTGMESA*AESFNERVGLA Trigger: AGCCAACCCCACTCTCTCATTAAATGACTCTGCTCAAGCTGACTCCATGCCTGTTGACTCTGTTGAAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS TCA 72 bp | ATACTGAGTATAGGGGTCAGGTGGCATTTGTCTCATTaGTACTGGAAGTCCAGGAGGTTGCAAAGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ILSIGVRWHLSH*YWKSRRLQRRW Trigger: CCACCTCCTTTGCAACCTCCTGGACTTCCAGTATCAATGAGACAAATGCCACCTGACCCCTATACTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS CAA 72 bp | CATACTGAGTATAGGGGTCAGGTGGCATTTGTCTCATaGATACTGGAAGTCCAGGAGGTTGCAAAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HTEYRGQVAFVS*ILEVQEVAKEV Trigger: CACCTCCTTTGCAACCTCCTGGACTTCCAGTATCAATGAGACAAATGCCACCTGACCCCTATACTCAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS GCA 72 bp | AGAGGACACTCCTTTTTGGCTTCTGACTTCTCAAACTaGTCCAACAGACTCGACAGATCTGATGCTTCGATC | + |
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Preference number: 6 (lower is better) Translates to: RGHSFLASDFSN*SNRLDRSDASI Trigger: GATCGAAGCATCAGATCTGTCGAGTCTGTTGGAGCAGTTTGAGAAGTCAGAAGCCAAAAAGGAGTGTCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062322.11 ENSMUST00000099392.10 ENSMUST00000111899.8 |
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| CDS TCA 72 bp | CAATGGCTGCAAATGCCTCTTCAGCATAACGGTAAGTaGCGAAACCATAGTTGTCACCTTGGACACGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: QWLQMPLQHNGK*RNHSCHLGHEN Trigger: ATTTTCGTGTCCAAGGTGACAACTATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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| CDS CCA 72 bp | CGAAACCATAGTTGTCACCTTGGACACGAAAATGAATaGTACACTCCTCAATTTCTCCAAAAACAGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: RNHSCHLGHENE*YTPQFLQKQRT Trigger: GGTTCTCTGTTTTTGGAGAAATTGAGGAGTGTACCATTCATTTTCGTGTCCAAGGTGACAACTATGGTTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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| CDS TCA 72 bp | CTTCTGGGCCTGTTTCAACAATGTATCAAAGTCAAGTaGATCGAATTTGCTCTTTACAGGAGCAGGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLGLFQQCIKVK*IEFALYRSRIK Trigger: TTTGATCCTGCTCCTGTAAAGAGCAAATTCGATTCACTTGACTTTGATACATTGTTGAAACAGGCCCAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062322.11 ENSMUST00000111899.8 |
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