Pregenerated sensors for PPP6R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036561Ensembl transcript IDs: ENSMUST00000088788.4, ENSMUST00000226221.2, ENSMUST00000228284.2, ENSMUST00000238818.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATCCTTCCTAGCAGCACAGCTACCCACACTCCAGACTGAGAGATaGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: TSFLAAQLPTLQTER*TLPDLQAAPRFGAH Trigger: GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGTCTGGAGTGTGGGTAGCTGTGCTGCTAGGAAGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CCA 90 bp | TCACTTCGTAGCCCTTGGTGGCCTGGAGCTCTGCCTCCCGGTTGTTaGGGTTACCGACTTCAATCACCATGCCCACTGAGAACAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: SLRSPWWPGALPPGC*GYRLQSPCPLRTAI Trigger: AATGGCTGTTCTCAGTGGGCATGGTGATTGAAGTCGGTAACCCCAACAACCGGGAGGCAGAGCTCCAGGCCACCAAGGGCTACGAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR TCA 90 bp | CCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACAGCTCAGTATaGATTGGCTCTAAGGCCTGGGTGAGGGAAAGGCAGGAAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PDLQAAPRFGAHSSV*IGSKAWVRERQERA Trigger: TGCTCTTTCCTGCCTTTCCCTCACCCAGGCCTTAGAGCCAATTCATACTGAGCTGTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR GCA 90 bp | ACTTCAATCACCATGCCCACTGAGAACAGCCATTTAAATGACTCTTaGTTCTCAGAGGGAGAAAATGGACAAAGGTCTAACTTTATTTTG | + |
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Preference number: 1 (lower is better) Translates to: TSITMPTENSHLNDS*FSEGENGQRSNFIL Trigger: CAAAATAAAGTTAGACCTTTGTCCATTTTCTCCCTCTGAGAAGCAAGAGTCATTTAAATGGCTGTTCTCAGTGGGCATGGTGATTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGAGATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACTGCCGAGGGACTGGGTaGAAAGCCCAAGGCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: TERWTLPDLQAAPRFGAHCRGTG*KAQGWV Trigger: TACCCAGCCTTGGGCTTTTCACCCAGTCCCTCGGCA...GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCAAGGGGCCGTATGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTCCAGGGAGCCTGGCCTaGTACACCCTCCCACACATT | + |
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Preference number: 2 (lower is better) Translates to: ASKGPYAGEKEPLPLLLSPGSLA*YTLPHI Trigger: AATGTGTGGGAGGGTGTACCAGGCCAGGCTCCCTGG...ACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCATACGGCCCCTTGCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCCTGCCATCTAACCCAGGGAGCCTaGCCTGGTACACCCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALSACSLLTSKSTPFPCHLTQGA*PGTPSH Trigger: GTGGGAGGGTGTACCAGGCCAGGCTCCCTGGGTTAG...ATGGCAGGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCCTGCCATCCTTGTGGACTGAGCTaGTACTGGACTCCTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALSACSLLTSKSTPFPCHPCGLS*YWTPGP Trigger: AGGGCCAGGAGTCCAGTAGCAGCTCAGTCCACAAGG...ATGGCAGGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCCTGCCATCGACTTCAATCACCATaGCCACTGAGAACAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: ALSACSLLTSKSTPFPCHRLQSP*PLRTAI Trigger: AATGGCTGTTCTCAGTGGGCATGGTGATTGAAGTCG...ATGGCAGGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGGGAAGATCTATTTCTAATCTGGATCTTTGCGATGAGAAGACACCTTTACTTCGTAGCCCTTGGTaGCCTGGAGCTCTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: EVGRSISNLDLCDEKTPLLRSPW*PGALPP Trigger: GGGAGGCAGAGCTCCAGGCCACCAAGGGCTACGAAG...TAAAGGTGTCTTCTCATCGCAAAGATCCAGATTAGAAATAGATCTTCCCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACCAAGACTTATTAATAGCTAAGGTGCATTCTGATTCTCTCTATAATGCCGCTCTAAGGCCTGGGTaGGGGAAAGGCAGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: FHQDLLIAKVHSDSLYNAALRPG*GKGRKE Trigger: CTCTTTCCTGCCTTTCCCTCACCCAGGCCTTAGAGC...GGCATTATAGAGAGAATCAGAATGCACCTTAGCTATTAATAAGTCTTGGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTGAAGTGGGAAGATCTATTTCTAATCTGGATCTTTGCGATGAGAAGACACATTGGCTCTAAGGCCTaGGTGAGGGAAAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NLKWEDLFLIWIFAMRRHIGSKA*VRERQE Trigger: TTCCTGCCTTTCCCTCACCCAGGCCTTAGAGCCAAT...GTGTCTTCTCATCGCAAAGATCCAGATTAGAAATAGATCTTCCCACTTCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CCA 72 bp | AGCCCTTGGTGGCCTGGAGCTCTGCCTCCCGGTTGTTaGGGTTACCGACTTCAATCACCATGCCCACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SPWWPGALPPGC*GYRLQSPCPLR Trigger: TCTCAGTGGGCATGGTGATTGAAGTCGGTAACCCCAACAACCGGGAGGCAGAGCTCCAGGCCACCAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR GCA 72 bp | AGGTTTCACTTCGTAGCCCTTGGTGGCCTGGAGCTCTaGCTCCCGGTTGTTGGGGTTACCGACTTCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: RFHFVALGGLEL*LPVVGVTDFNH Trigger: GTGATTGAAGTCGGTAACCCCAACAACCGGGAGGCAGAGCTCCAGGCCACCAAGGGCTACGAAGTGAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR TCA 72 bp | CAGGCAGCACCTAGGTTTGGAGCACACAGCTCAGTATaGATTGGCTCTAAGGCCTGGGTGAGGGAAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QAAPRFGAHSSV*IGSKAWVRERQ Trigger: CTGCCTTTCCCTCACCCAGGCCTTAGAGCCAATTCATACTGAGCTGTGTGCTCCAAACCTAGGTGCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR TCA 72 bp | AATACAGACATAAGCAAGTGGTGCCGAGGGACTGGGTaGAAAGCCCAAGGCTGGGTATCTGGTGCTCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: NTDISKWCRGTG*KAQGWVSGAPN Trigger: GTTAGGAGCACCAGATACCCAGCCTTGGGCTTTTCACCCAGTCCCTCGGCACCACTTGCTTATGTCTGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR TCA 72 bp | CACACAGCTCAGTATGAATTGGCTCTAAGGCCTGGGTaGGGGAAAGGCAGGAAAGAGCACTTTTGTTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: HTAQYELALRPG*GKGRKEHFCFW Trigger: CCAGAAACAAAAGTGCTCTTTCCTGCCTTTCCCTCACCCAGGCCTTAGAGCCAATTCATACTGAGCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR GCA 72 bp | GATACGGAAGAAAGACGCTTACTTGCTTTGTCTGCTTaGTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: DTEERRLLALSA*SLLTSKSTPFP Trigger: GGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGCAAGTAAGCGTCTTTCTTCCGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CCA 72 bp | TGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTaGCCTAAGCAGAATAAAAATACAGACATAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: CWGEGTSTFASK*PKQNKNTDISK Trigger: CTTGCTTATGTCTGTATTTTTATTCTGCTTAGGCCACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCACCAAGACTTATTAATAGCTAAGGTGCATTCTGATTCTCTCTATAATGCCAAGGAACCTCTACCTTaGCTTCTAAGTGGCCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: FHQDLLIAKVHSDSLYNAKEPLP*LLSGLS Trigger: GCTTAGGCCACTTAGAAGCAAAGGTAGAGGTTCCTT...GGCATTATAGAGAGAATCAGAATGCACCTTAGCTATTAATAAGTCTTGGTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCTCCTCCCCACCTTCCCCTCACACTGGATCCACTTCCTTTGGGTCTCTCCCATGCACTGCTGCCTaGACAGGAAGTCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSSSPPSPHTGSTSFGSLPCTAA*TGSPAA Trigger: AGCTGCTGGACTTCCTGTGCAGGCAGCAGTGCATGG...GAGAGACCCAAAGGAAGTGGATCCAGTGTGAGGGGAAGGTGGGGAGGAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGGGTATCTGGTGCTCCTAACCCAGGGAGCCTGGCCTGGTACACCCTCAAGTCCAGCAGCTTCTaGTTCTGGGCCTTACACTCC | + |
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Preference number: 4 (lower is better) Translates to: QGWVSGAPNPGSLAWYTLKSSSF*FWALHS Trigger: GGAGTGTAAGGCCCAGAACCAGAAGCTGCTGGACTT...GAGGGTGTACCAGGCCAGGCTCCCTGGGTTAGGAGCACCAGATACCCAGCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGAGATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACACATGTAGGACCTCCTaGCGGAGACCAACTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TERWTLPDLQAAPRFGAHTCRTS*RRPTGS Trigger: GGAGCCAGTTGGTCTCCGGCAGGAGGTCCTACATGT...GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR TCA 90 bp | GCAGCACAGCTACCCACACTCCAGACTGAGAGATGGACCCTTCCTGACCTCCAGCGCCTAGTCTGTCGCTaGTCTTCTCTTCCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AAQLPTLQTERWTLPDLQRLVCR*SSLPCP Trigger: AGGACATGGAAGAGAAGATCAGCGACAGACTAGGCG...CTGGAGGTCAGGAAGGGTCCATCTCTCAGTCTGGAGTGTGGGTAGCTGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCTCCTCCCCACCTTCCCCTCACACTGGATCCACTTCCTTTGGGTCTCTCTCATCCATCAGCTCCTaGAGGGTCACATGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PSSSPPSPHTGSTSFGSLSSISS*RVTCSL Trigger: CAAGGAACATGTGACCCTGCAGGAGCTGATGGATGA...GAGAGACCCAAAGGAAGTGGATCCAGTGTGAGGGGAAGGTGGGGAGGAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | GGGCCGTATGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTGGCCTAAGCTCCTCCATGCACTGCTaGCTGCACAGGAAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPYAGEKEPLPLLLSGLSSSMHC*LHRKSS Trigger: GCTGGACTTCCTGTGCAGGCAGCAGTGCATGGAGGA...GCTTAGGCCACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCATACGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CAA 72 bp | CCAGTGTATAGTGAAGACCAGCTGAGACTCCCAGCCTaGTGGACTGAGCTGCTACTGGACTCCTGGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PVYSEDQLRLPA*WTELLLDSWPF Trigger: GAAGGGCCAGGAGTCCAGTAGCAGCTCAGTCCACAAGGCTGGGAGTCTCAGCTGGTCTTCACTATACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAGATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACAGCAGCTTCTGGTTCTaGGCCTTACACTCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TERWTLPDLQAAPRFGAHSSFWF*ALHSCK Trigger: CTTGCAGGAGTGTAAGGCCCAGAACCAGAAGCTGCT...GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAAAGGCAGGAAAGAGCACTTTTGTTTCTGGAGCTAGCAAGGGGCCGTATTCACCAGCTCCTCCATaGACTGCTGCCTGCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: EGKAGKSTFVSGASKGPYSPAPP*TAACTG Trigger: TCCTGTGCAGGCAGCAGTGCATGGAGGAGCTGGTGA...ATACGGCCCCTTGCTAGCTCCAGAAACAAAAGTGCTCTTTCCTGCCTTTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAGATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACAGGAGCTTGTCAACGTaGGACGTGGTGTTCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TERWTLPDLQAAPRFGAHRSLST*DVVFKS Trigger: TGACTTGAACACCACGTCCCACGTTGACAAGCTCCT...GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | GGGCCGTATGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTGGCCTAAGCTTCCATGTCCTGGGGTaGGTCCTGTGTGATGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GPYAGEKEPLPLLLSGLSFHVLG*VLCDEV Trigger: AACCTCATCACACAGGACCCACCCCAGGACATGGAA...GCTTAGGCCACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCATACGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | GGGCCGTATGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTGGCCTAAGCTTCTCTTCCATGTCCTaGGGTGGGTCCTGTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: GPYAGEKEPLPLLLSGLSFSSMS*GGSCVM Trigger: CATCACACAGGACCCACCCCAGGACATGGAAGAGAA...GCTTAGGCCACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCATACGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CAA 72 bp | GATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTaGGAGCACACAGCTCAGTATGAATTGGCTCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: DGPFLTSRQHLG*EHTAQYELALR Trigger: CCTTAGAGCCAATTCATACTGAGCTGTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | GCAGCACAGCTACCCACACTCCAGACTGAGAGATGGACCCTTCCTGACCTCCAGATGTGCTTCAGGAGCTaGCTGATGAATTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AAQLPTLQTERWTLPDLQMCFRS*LMNFSF Trigger: GAAGGAGAAATTCATCAGCCAGCTCCTGAAGCACAT...CTGGAGGTCAGGAAGGGTCCATCTCTCAGTCTGGAGTGTGGGTAGCTGTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAGATGGACCCTTCCTGACCTCCAGGCAGCACCTAGGTTTGGAGCACACTGTCAACGTGGGACGTaGTGTTCAAGTCAAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TERWTLPDLQAAPRFGAHCQRGT*CSSQIS Trigger: GGAAATTTGACTTGAACACCACGTCCCACGTTGACA...GTGTGCTCCAAACCTAGGTGCTGCCTGGAGGTCAGGAAGGGTCCATCTCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR TCA 90 bp | GCTTTGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCCTGCCATTGCCAATGGTCTTGCTaGAAAAACTGGCAAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ALSACSLLTSKSTPFPCHCQWSC*KNWQAE Trigger: CTCTGCTTGCCAGTTTTTTCAGCAAGACCATTGGCA...ATGGCAGGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACTCCCTTTCCCTGCCATTGGGCCTTACACTCCTaGAAGATGTCATCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: ALSACSLLTSKSTPFPCHWALHS*KMSSSS Trigger: GGATGAAGATGACATCTTGCAGGAGTGTAAGGCCCA...ATGGCAGGGAAAGGGAGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| 3UTR CAA 72 bp | TCCATAAAGGATACGGAAGAAAGACGCTTACTTGCTTaGTCTGCTTGCTCTCTCCTTACTAGCAAGTCAACT | + |
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Preference number: 4 (lower is better) Translates to: SIKDTEERRLLA*SACSLLTSKST Trigger: AGTTGACTTGCTAGTAAGGAGAGAGCAAGCAGACAAAGCAAGTAAGCGTCTTTCTTCCGTATCCTTTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR TCA 90 bp | TTTCACCAAGACTTATTAATAGCTAAGGTGCATTCTGATTCTCTCTATAATGCCTCTTCTTCAGGAACATaGTCACCTGTTCAGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FHQDLLIAKVHSDSLYNASSSGT*SPVQFS Trigger: GGAAAACTGAACAGGTGATCATGTTCCTGAAGAAGA...GGCATTATAGAGAGAATCAGAATGCACCTTAGCTATTAATAAGTCTTGGTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCTCCTCCCCACCTTCCCCTCACACTGGATCCACTTCCTTTGGGTCTCTCCTGGCAAGCAGAGGGTaGAGTGGCGGCTCCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PSSSPPSPHTGSTSFGSLLASRG*SGGSWS Trigger: GGACCAGGAGCCGCCACTCAACCCTCTGCTTGCCAG...GAGAGACCCAAAGGAAGTGGATCCAGTGTGAGGGGAAGGTGGGGAGGAGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS CCA 90 bp | ACAGCAGCCTCCGCTGTCCTGGGTGGTGGGGAGACCTTTCCAGTATaGCCTGTGCACACAGCTTCCACAGCACCCGCTGCCTTCTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: TAASAVLGGGETFPV*PVHTASTAPAAFSS Trigger: TGACGAGAAGGCAGCGGGTGCTGTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGGCTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | AGGACACTCAGCCCTGCCAACAGCAGCCTCCGCTGTCCTGGGTGGTaGGGAGACCTTTCCAGTATGGCCTGTGCACACAGCTTCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: RTLSPANSSLRCPGW*GDLSSMACAHSFHS Trigger: GCTGTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGGCTGCTGTTGGCAGGGCTGAGTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | GTCAGGACACTCAGCCCTGCCAACAGCAGCCTCCGCTGTCCTGGGTaGTGGGGAGACCTTTCCAGTATGGCCTGTGCACACAGCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VRTLSPANSSLRCPG*WGDLSSMACAHSFH Trigger: GTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGGCTGCTGTTGGCAGGGCTGAGTGTCCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | TGCCTTCCTGTCCTTTGTCATCGTCCCCAGGGTGGCAACTATGGCTaGGGCTGCTGTGGTTACTGCCACGATCGGTCCTGGGGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: CLPVLCHRPQGGNYG*GCCGYCHDRSWGHC Trigger: GCAGTGCCCCCAGGACCGATCGTGGCAGTAACCACAGCAGCCCCAGCCATAGTTGCCACCCTGGGGACGATGACAAAGGACAGGAAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 90 bp | CCGGCAGAGCTCCTGGTTGATGCCAGGTGTGTTTGTGTGCAGCAGTaGAGCCATGAGGCGTGCACCATGAAGACGAGCATTCCCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PAELLVDARCVCVQQ*SHEACTMKTSIPQG Trigger: CCCCTGGGGAATGCTCGTCTTCATGGTGCACGCCTCATGGCTGCACTGCTGCACACAAACACACCTGGCATCAACCAGGAGCTCTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 90 bp | CCTCCGCTGTCCTGGGTGGTGGGGAGACCTTTCCAGTATGGCCTGTaGACACAGCTTCCACAGCACCCGCTGCCTTCTCGTCATCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: PPLSWVVGRPFQYGL*TQLPQHPLPSRHLH Trigger: GTGAAGATGACGAGAAGGCAGCGGGTGCTGTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | CTGCTCCACACAGTCCTGCGACTCCAATGTTATGAGGAGGGGGTCTaGCTCCACAGTCTCCTGCAGCTGACTGCCCTGGTCTCTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLHTVLRLQCYEEGV*LHSLLQLTALVSAQ Trigger: CTGGGCAGAGACCAGGGCAGTCAGCTGCAGGAGACTGTGGAGCCAGACCCCCTCCTCATAACATTGGAGTCGCAGGACTGTGTGGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | CTGGCAGGGCATCTGCCTTCCTGTCCTTTGTCATCGTCCCCAGGGTaGCAACTATGGCTGGGGCTGCTGTGGTTACTGCCACGATCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAGHLPSCPLSSSPG*QLWLGLLWLLPRSV Trigger: GACCGATCGTGGCAGTAACCACAGCAGCCCCAGCCATAGTTGCCACCCTGGGGACGATGACAAAGGACAGGAAGGCAGATGCCCTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 90 bp | CCCTGCAGAGGCTCCACCTTGCCATCGGATCCACTGGCTTCTGCCTaGTCCTCCCGAGCAGCGTGGGAAAGAATAGCGGCTATGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PCRGSTLPSDPLASA*SSRAAWERIAAMHS Trigger: ACTATGCATAGCCGCTATTCTTTCCCACGCTGCTCGGGAGGAGCAGGCAGAAGCCAGTGGATCCGATGGCAAGGTGGAGCCTCTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | GCACAAGGCGAGGTAGGACCAAAGGTTTTCTCTGGGCCTGGACTCTaGCCACCCTCGGCATTGCTGTGGTCCATGTCCACAGGAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQGEVGPKVFSGPGL*PPSALLWSMSTGEL Trigger: CAGCTCTCCTGTGGACATGGACCACAGCAATGCCGAGGGTGGCCAGAGTCCAGGCCCAGAGAAAACCTTTGGTCCTACCTCGCCTTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | TACTGTCAGGACACTCAGCCCTGCCAACAGCAGCCTCCGCTGTCCTaGGTGGTGGGGAGACCTTTCCAGTATGGCCTGTGCACACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YCQDTQPCQQQPPLS*VVGRPFQYGLCTQL Trigger: AAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGGCTGCTGTTGGCAGGGCTGAGTGTCCTGACAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS-3UTR CAA 90 bp | GCAGCACAGCTACCCACACTCCAGACTGAGAGATGGACCCTTCCTGACCTCCAGTCCTTGTCCAGGAGCTaGTCAACGTGGGACGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAQLPTLQTERWTLPDLQSLSRS*STWDVV Trigger: CACCACGTCCCACGTTGACAAGCTCCTGGACAAGGA...CTGGAGGTCAGGAAGGGTCCATCTCTCAGTCTGGAGTGTGGGTAGCTGTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS GCA 90 bp | GACCTTTCCAGTATGGCCTGTGCACACAGCTTCCACAGCACCCGCTaGCTTCTCGTCATCTTCACTGTCAGATCCCCCAGAGGAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DLSSMACAHSFHSTR*LLVIFTVRSPRGAA Trigger: AGCAGCTCCTCTGGGGGATCTGACAGTGAAGATGACGAGAAGGCAGCGGGTGCTGTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | CTCTCGTCCTCGCCTAGTCTGTCGCTGATCTTCTCTTCCATGTCCTaGGGTGGGTCCTGTGTGATGAGGTTCACCAGCTCCTCCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSPSLSLIFSSMS*GGSCVMRFTSSSMH Trigger: GTGCATGGAGGAGCTGGTGAACCTCATCACACAGGACCCACCCCAGGACATGGAAGAGAAGATCAGCGACAGACTAGGCGAGGACGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS TCA 90 bp | CCACGAAGGATGCTGCTGCTGACGGAGTGTGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAGCCTTCTGTTCCAACACGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRMLLLTECDLSSP*EKESTKPSVPTRLG Trigger: GCCAAGGCGTGTTGGAACAGAAGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCACACTCCGTCAGCAGCAGCATCCTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 90 bp | CAGCCATGGCTCGATGCCACGAAGGATGCTGCTGCTGACGGAGTGTaGCCTTTCCAGTCCCTGAGAAAAGGAGTCCACCAAGCCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPWLDATKDAAADGV*PFQSLRKGVHQAFC Trigger: ACAGAAGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCACACTCCGTCAGCAGCAGCATCCTTCGTGGCATCGAGCCATGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 90 bp | CCAGGTGTGTTTGTGTGCAGCAGTGCAGCCATGAGGCGTGCACCATaGAGACGAGCATTCCCCAGGGGCTCCTCTAACACACCAATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGVFVCSSAAMRRAP*RRAFPRGSSNTPIV Trigger: CACTATTGGTGTGTTAGAGGAGCCCCTGGGGAATGCTCGTCTTCATGGTGCACGCCTCATGGCTGCACTGCTGCACACAAACACACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | AACAAGTCCAGCAGTAAGTCCATGGTGTTGAGCCGGCAGAGCTCCTaGTTGATGCCAGGTGTGTTTGTGTGCAGCAGTGCAGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKSSSKSMVLSRQSS*LMPGVFVCSSAAMR Trigger: CCTCATGGCTGCACTGCTGCACACAAACACACCTGGCATCAACCAGGAGCTCTGCCGGCTCAACACCATGGACTTACTGCTGGACTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | TTGCCATCGGATCCACTGGCTTCTGCCTGCTCCTCCCGAGCAGCGTaGGAAAGAATAGCGGCTATGCATAGTTCCACTTGGAGGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSDPLASACSSRAA*ERIAAMHSSTWRCK Trigger: TTTGCACCTCCAAGTGGAACTATGCATAGCCGCTATTCTTTCCCACGCTGCTCGGGAGGAGCAGGCAGAAGCCAGTGGATCCGATGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 90 bp | GGAAATTCTTCAGCCATGGCTCGATGCCACGAAGGATGCTGCTGCTaGCGGAGTGTGACCTTTCCAGTCCCTGAGAAAAGGAGTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GNSSAMARCHEGCCC*RSVTFPVPEKRSPP Trigger: TGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCACACTCCGTCAGCAGCAGCATCCTTCGTGGCATCGAGCCATGGCTGAAGAATTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | CAGGCTGTGTTTGGGTATTTGAATCGGACCTTCTCTTCCATGTCCTaGGGTGGGTCCTGTGTGATGAGGTTCACCAGCTCCTCCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QAVFGYLNRTFSSMS*GGSCVMRFTSSSMH Trigger: GTGCATGGAGGAGCTGGTGAACCTCATCACACAGGACCCACCCCAGGACATGGAAGAGAAGGTCCGATTCAAATACCCAAACACAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 90 bp | TGGGCCTTACACTCCTGCAAGATGTCATCTTCATCCATCAGCTCCTaGAGGGTCACATGTTCCTTGTCCAGGAGCTTGTCAACGTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WALHSCKMSSSSISS*RVTCSLSRSLSTWD Trigger: GTCCCACGTTGACAAGCTCCTGGACAAGGAACATGTGACCCTGCAGGAGCTGATGGATGAAGATGACATCTTGCAGGAGTGTAAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088788.4 ENSMUST00000226221.2 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | TGTGTTTGGGTATTTGAATCGGACCTTCTCTTCCATGTCCTGGGGTaGGTCCTGTGTGATGAGGTTCACCAGCTCCTCCATGCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVWVFESDLLFHVLG*VLCDEVHQLLHALL Trigger: CAGCAGTGCATGGAGGAGCTGGTGAACCTCATCACACAGGACCCACCCCAGGACATGGAAGAGAAGGTCCGATTCAAATACCCAAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCAAGGGGCCGTATGCTGGGGAGAAGGAACCTCTACCTTTGCTTCTAAGTAGGGTCACATGTTCCTaGTCCAGGAGCTTGTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: ASKGPYAGEKEPLPLLLSRVTCS*SRSLST Trigger: CGTTGACAAGCTCCTGGACAAGGAACATGTGACCCT...ACTTAGAAGCAAAGGTAGAGGTTCCTTCTCCCCAGCATACGGCCCCTTGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS TCA 90 bp | CATAGAGAAGGTTCAGCAGACTCTCGTCCTCGCCTAGTCTGTCGCTaGTCTGTGGCACATCACAAGTCAGAAGCTCACAGGCTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HREGSADSRPRLVCR*SVAHHKSEAHRLCL Trigger: CAAACACAGCCTGTGAGCTTCTGACTTGTGATGTGCCACAGATCAGCGACAGACTAGGCGAGGACGAGAGTCTGCTGAACCTTCTCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGGCTGGGTATCTGGTGCTCCTAACCCAGGGAGCCTGGCCTGGTACTTCCTTGCAATAAGATaGCCAATGGTCTTGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAQGWVSGAPNPGSLAWYFLAIR*PMVLLK Trigger: TTTCAGCAAGACCATTGGCAATCTTATTGCAAGGAA...GTACCAGGCCAGGCTCCCTGGGTTAGGAGCACCAGATACCCAGCCTTGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS TCA 90 bp | GTCTCTGCCCAGCCTGATGATGTCACAGAGTGCCTGAGAAGCATTTaGCTGCCTATCTTCATCCTGGTGGGGATGGATCAATGCCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSAQPDDVTECLRSI*LPIFILVGMDQCHN Trigger: ATTGTGGCATTGATCCATCCCCACCAGGATGAAGATAGGCAGTCAAATGCTTCTCAGGCACTCTGTGACATCATCAGGCTGGGCAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | AGCAGCAGGTCCATGAGAGCTGAGGTGCCTATGTGCTTCAGGAGCTaGCTGATGAATTTCTCCTTCTTCTTCAGGAACATGATCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSMRAEVPMCFRS*LMNFSFFFRNMITC Trigger: ACAGGTGATCATGTTCCTGAAGAAGAAGGAGAAATTCATCAGCCAGCTCCTGAAGCACATAGGCACCTCAGCTCTCATGGACCTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088788.4 ENSMUST00000226221.2 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 90 bp | TGCCTATCTTCATCCTGGTGGGGATGGATCAATGCCACAATTCTCTaGATGATTTTCTCTTCATTCAGCCAATGTAGGACCTCCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSSSWWGWINATIL*MIFSSFSQCRTSCR Trigger: CCGGCAGGAGGTCCTACATTGGCTGAATGAAGAGAAAATCATCCAGAGAATTGTGGCATTGATCCATCCCCACCAGGATGAAGATAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 90 bp | TATCTTCATCCTGGTGGGGATGGATCAATGCCACAATTCTCTGGATaGTTTTCTCTTCATTCAGCCAATGTAGGACCTCCTGCCGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLHPGGDGSMPQFSG*FSLHSANVGPPAGD Trigger: GTCTCCGGCAGGAGGTCCTACATTGGCTGAATGAAGAGAAAATCATCCAGAGAATTGTGGCATTGATCCATCCCCACCAGGATGAAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CAGGGGCTAACACGGTACTGTCAGGACACTCAGCCCTaGCAACAGCAGCCTCCGCTGTCCTGGGTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLTRYCQDTQP*QQQPPLSWVVG Trigger: CCCCACCACCCAGGACAGCGGAGGCTGCTGTTGGCAGGGCTGAGTGTCCTGACAGTACCGTGTTAGCCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | AGCCCTGCCAACAGCAGCCTCCGCTGTCCTGGGTGGTaGGGAGACCTTTCCAGTATGGCCTGTGCACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPANSSLRCPGW*GDLSSMACAHS Trigger: GCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGACAGCGGAGGCTGCTGTTGGCAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | GGCTCCACCTTGCCATCGGATCCACTGGCTTCTGCCTaGTCCTCCCGAGCAGCGTGGGAAAGAATAGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSTLPSDPLASA*SSRAAWERIAA Trigger: AGCCGCTATTCTTTCCCACGCTGCTCGGGAGGAGCAGGCAGAAGCCAGTGGATCCGATGGCAAGGTGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | GGGGCACTGCAGCAGCCACTGAGGAAGAGACCACTATaGTGGCCGTGGGAGAGCCTGCCTTGCTTGGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GALQQPLRKRPL*WPWESLPCLVL Trigger: TAGCACCAAGCAAGGCAGGCTCTCCCACGGCCACCATAGTGGTCTCTTCCTCAGTGGCTGCTGCAGTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CAGAGGCTCCACCTTGCCATCGGATCCACTGGCTTCTaGCTGCTCCTCCCGAGCAGCGTGGGAAAGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRLHLAIGSTGF*LLLPSSVGKNS Trigger: GCTATTCTTTCCCACGCTGCTCGGGAGGAGCAGGCAGAAGCCAGTGGATCCGATGGCAAGGTGGAGCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | TCCTGGGTGGTGGGGAGACCTTTCCAGTATGGCCTGTaGACACAGCTTCCACAGCACCCGCTGCCTTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SWVVGRPFQYGL*TQLPQHPLPSR Trigger: ACGAGAAGGCAGCGGGTGCTGTGGAAGCTGTGTGCACAGGCCATACTGGAAAGGTCTCCCCACCACCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | CCAGGCACAAGGCGAGGTAGGACCAAAGGTTTTCTCTaGGCCTGGACTCTGGCCACCCTCGGCATTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGTRRGRTKGFL*AWTLATLGIAV Trigger: CACAGCAATGCCGAGGGTGGCCAGAGTCCAGGCCCAGAGAAAACCTTTGGTCCTACCTCGCCTTGTGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | GCACTGCAGCAGCCACTGAGGAAGAGACCACTATGGTaGCCGTGGGAGAGCCTGCCTTGCTTGGTGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: ALQQPLRKRPLW*PWESLPCLVLW Trigger: CCATAGCACCAAGCAAGGCAGGCTCTCCCACGGCCACCATAGTGGTCTCTTCCTCAGTGGCTGCTGCAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | GTCCTTTGTCATCGTCCCCAGGGTGGCAACTATGGCTaGGGCTGCTGTGGTTACTGCCACGATCGGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLCHRPQGGNYG*GCCGYCHDRSW Trigger: CCAGGACCGATCGTGGCAGTAACCACAGCAGCCCCAGCCATAGTTGCCACCCTGGGGACGATGACAAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | AGGTGTGTTTGTGTGCAGCAGTGCAGCCATGAGGCGTaGACCATGAAGACGAGCATTCCCCAGGGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RCVCVQQCSHEA*TMKTSIPQGLL Trigger: GAGGAGCCCCTGGGGAATGCTCGTCTTCATGGTGCACGCCTCATGGCTGCACTGCTGCACACAAACACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CTCTTCCACAAAGCTCTCCCAGCGTCCACGGCAATCTaGAGGGAGCCCTCGGATGACTTCACTGATGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFHKALPASTAI*REPSDDFTDVG Trigger: GCCCACATCAGTGAAGTCATCCGAGGGCTCCCTGCAGATTGCCGTGGACGCTGGGAGAGCTTTGTGGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CACTATGGTGGCCGTGGGAGAGCCTGCCTTGCTTGGTaGTATGGTAGCCACGGCAGGACTGATGGTCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HYGGRGRACLAW*YGSHGRTDGHF Trigger: GAAGTGACCATCAGTCCTGCCGTGGCTACCATAGCACCAAGCAAGGCAGGCTCTCCCACGGCCACCATAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | TCCTGTCCTTTGTCATCGTCCCCAGGGTGGCAACTATaGCTGGGGCTGCTGTGGTTACTGCCACGATCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCPLSSSPGWQL*LGLLWLLPRSV Trigger: GACCGATCGTGGCAGTAACCACAGCAGCCCCAGCCATAGTTGCCACCCTGGGGACGATGACAAAGGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CAA 72 bp | GAAGAGACCACTATGGTGGCCGTGGGAGAGCCTGCCTaGCTTGGTGCTATGGTAGCCACGGCAGGACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: EETTMVAVGEPA*LGAMVATAGLM Trigger: CATCAGTCCTGCCGTGGCTACCATAGCACCAAGCAAGGCAGGCTCTCCCACGGCCACCATAGTGGTCTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CAA 90 bp | GCCACTGAGGAAGAGACCACTATGGTGGCCGTGGGAGAGCCTGCCTaGCTTGGTGCTATGGTAGCCACGGCAGGACTGATGGTCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATEEETTMVAVGEPA*LGAMVATAGLMVTS Trigger: AGAAGTGACCATCAGTCCTGCCGTGGCTACCATAGCACCAAGCAAGGCAGGCTCTCCCACGGCCACCATAGTGGTCTCTTCCTCAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | GAAGCTGCTCCACACAGTCCTGCGACTCCAATGTTATaGGGAGGGGGTCTGGCTCCACAGTCTCCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAAPHSPATPML*GGGLAPQSPAA Trigger: AGCTGCAGGAGACTGTGGAGCCAGACCCCCTCCTCATAACATTGGAGTCGCAGGACTGTGTGGAGCAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CAA 90 bp | AAGTCCAGCAGTAAGTCCATGGTGTTGAGCCGGCAGAGCTCCTGGTaGATGCCAGGTGTGTTTGTGTGCAGCAGTGCAGCCATGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: KSSSKSMVLSRQSSW*MPGVFVCSSAAMRR Trigger: ACGCCTCATGGCTGCACTGCTGCACACAAACACACCTGGCATCAACCAGGAGCTCTGCCGGCTCAACACCATGGACTTACTGCTGGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | TCAGCCATGGCTCGATGCCACGAAGGATGCTGCTGCTaGCGGAGTGTGACCTTTCCAGTCCCTGAGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAMARCHEGCCC*RSVTFPVPEKR Trigger: CCTTTTCTCAGGGACTGGAAAGGTCACACTCCGTCAGCAGCAGCATCCTTCGTGGCATCGAGCCATGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | AGGAGCGGCCAATCCAGGCACATTCCTAGCTACTGCTaGGCCAGTCTTCCTGTCCTGGCCTCCATGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSGQSRHIPSYC*ASLPVLASMFQ Trigger: TTGGAACATGGAGGCCAGGACAGGAAGACTGGCTCAGCAGTAGCTAGGAATGTGCCTGGATTGGCCGCTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | AGTATGGCCTGTGCACACAGCTTCCACAGCACCCGCTaGCTTCTCGTCATCTTCACTGTCAGATCCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SMACAHSFHSTR*LLVIFTVRSPR Trigger: TCTGGGGGATCTGACAGTGAAGATGACGAGAAGGCAGCGGGTGCTGTGGAAGCTGTGTGCACAGGCCATACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | GATCCACTGGCTTCTGCCTGCTCCTCCCGAGCAGCGTaGGAAAGAATAGCGGCTATGCATAGTTCCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPLASACSSRAA*ERIAAMHSSTW Trigger: CCAAGTGGAACTATGCATAGCCGCTATTCTTTCCCACGCTGCTCGGGAGGAGCAGGCAGAAGCCAGTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | TCGCCTAGTCTGTCGCTGATCTTCTCTTCCATGTCCTaGGGTGGGTCCTGTGTGATGAGGTTCACCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPSLSLIFSSMS*GGSCVMRFTSS Trigger: GGAGCTGGTGAACCTCATCACACAGGACCCACCCCAGGACATGGAAGAGAAGATCAGCGACAGACTAGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226221.2 |
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| CDS TCA 72 bp | GGTTCAGCAGACTCTCGTCCTCGCCTAGTCTGTCGCTaGTCTGTGGCACATCACAAGTCAGAAGCTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: GSADSRPRLVCR*SVAHHKSEAHR Trigger: CCTGTGAGCTTCTGACTTGTGATGTGCCACAGATCAGCGACAGACTAGGCGAGGACGAGAGTCTGCTGAACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CTCCTGGTTGATGCCAGGTGTGTTTGTGTGCAGCAGTaGAGCCATGAGGCGTGCACCATGAAGACGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: LLVDARCVCVQQ*SHEACTMKTSI Trigger: AATGCTCGTCTTCATGGTGCACGCCTCATGGCTGCACTGCTGCACACAAACACACCTGGCATCAACCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | TGGGTTGAGGAGGAGCTGATGGAAATTCTTCAGCCATaGCTCGATGCCACGAAGGATGCTGCTGCTGACGGA | + |
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Preference number: 6 (lower is better) Translates to: WVEEELMEILQP*LDATKDAAADG Trigger: TCCGTCAGCAGCAGCATCCTTCGTGGCATCGAGCCATGGCTGAAGAATTTCCATCAGCTCCTCCTCAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CGCAGCAGCAGGTCCATGAGAGCTGAGGTGCCTATGTaGTTCAGGAGCTGGCTGATGAATTTCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSSRSMRAEVPM*FRSWLMNFSFF Trigger: GAAGAAGGAGAAATTCATCAGCCAGCTCCTGAAGCACATAGGCACCTCAGCTCTCATGGACCTGCTGCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088788.4 ENSMUST00000226221.2 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | AGGTTCTGTACAACTGCATTGGCGATCCTTGTGAGGTaGCCCATATTCCCACGTCTCATACCACCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RFCTTALAILVR*PIFPRLIPPAA Trigger: GGCAGCAGGTGGTATGAGACGTGGGAATATGGGCCACCTCACAAGGATCGCCAATGCAGTTGTACAGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CAA 72 bp | TCTTCATCCATCAGCTCCTGCAGGGTCACATGTTCCTaGTCCAGGAGCTTGTCAACGTGGGACGTGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSISSCRVTCS*SRSLSTWDVVF Trigger: GAACACCACGTCCCACGTTGACAAGCTCCTGGACAAGGAACATGTGACCCTGCAGGAGCTGATGGATGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088788.4 ENSMUST00000226221.2 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | TGGTCTCTGCCCAGCCTGATGATGTCACAGAGTGCCTaGGAAGCATTTGACTGCCTATCTTCATCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: WSLPSLMMSQSA*EAFDCLSSSWW Trigger: CCACCAGGATGAAGATAGGCAGTCAAATGCTTCTCAGGCACTCTGTGACATCATCAGGCTGGGCAGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | ATGCTGCTGCTGACGGAGTGTGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAGCCTTCTGTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: MLLLTECDLSSP*EKESTKPSVPT Trigger: TGTTGGAACAGAAGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCACACTCCGTCAGCAGCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | TTTGGGTATTTGAATCGGACCTTCTCTTCCATGTCCTaGGGTGGGTCCTGTGTGATGAGGTTCACCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FGYLNRTFSSMS*GGSCVMRFTSS Trigger: GGAGCTGGTGAACCTCATCACACAGGACCCACCCCAGGACATGGAAGAGAAGGTCCGATTCAAATACCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CTGGATCCGATCACTGCAACAGGCTTCAAACAGAGCTaGACTGGGACTGTCCTCATCGGCTTCAATGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LDPITATGFKQS*TGTVLIGFNVE Trigger: TTCAACATTGAAGCCGATGAGGACAGTCCCAGTGCAGCTCTGTTTGAAGCCTGTTGCAGTGATCGGATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS GCA 72 bp | CCTCTTCATCATCATCAAAGGGCTGGATCCGATCACTaGAACAGGCTTCAAACAGAGCTGCACTGGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: PLHHHQRAGSDH*NRLQTELHWDC Trigger: ACAGTCCCAGTGCAGCTCTGTTTGAAGCCTGTTGCAGTGATCGGATCCAGCCCTTTGATGATGATGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | CAGCCTGATGATGTCACAGAGTGCCTGAGAAGCATTTaGCTGCCTATCTTCATCCTGGTGGGGATGGATCAA | + |
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Preference number: 6 (lower is better) Translates to: QPDDVTECLRSI*LPIFILVGMDQ Trigger: TTGATCCATCCCCACCAGGATGAAGATAGGCAGTCAAATGCTTCTCAGGCACTCTGTGACATCATCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CAA 90 bp | AAGATGTCATCTTCATCCATCAGCTCCTGCAGGGTCACATGTTCCTaGTCCAGGAGCTTGTCAACGTGGGACGTGGTGTTCAAGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KMSSSSISSCRVTCS*SRSLSTWDVVFKSN Trigger: ATTTGACTTGAACACCACGTCCCACGTTGACAAGCTCCTGGACAAGGAACATGTGACCCTGCAGGAGCTGATGGATGAAGATGACATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088788.4 ENSMUST00000226221.2 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS TCA 72 bp | CCTGGTGGGGATGGATCAATGCCACAATTCTCTGGATaGTTTTCTCTTCATTCAGCCAATGTAGGACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGGDGSMPQFSG*FSLHSANVGPP Trigger: AGGAGGTCCTACATTGGCTGAATGAAGAGAAAATCATCCAGAGAATTGTGGCATTGATCCATCCCCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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| CDS CCA 72 bp | GAAGCATTTGACTGCCTATCTTCATCCTGGTGGGGATaGATCAATGCCACAATTCTCTGGATGATTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EAFDCLSSSWWG*INATILWMIFS Trigger: AGAGAAAATCATCCAGAGAATTGTGGCATTGATCCATCCCCACCAGGATGAAGATAGGCAGTCAAATGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088788.4 ENSMUST00000228284.2 ENSMUST00000238818.2 |
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