Pregenerated sensors for PPP6C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026753Ensembl transcript IDs: ENSMUST00000028087.6, ENSMUST00000204257.3, ENSMUST00000204701.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTCCTCTGGGACTGATTGCCCAAGTGTCCACATCTTCAGGATCTaGCCACACCAAGTCACAAAATGCTCCTTTGTGAGGAATTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CSSGTDCPSVHIFRI*PHQVTKCSFVRNFL Trigger: CAGGAAATTCCTCACAAAGGAGCATTTTGTGACTTGGTGTGGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR CCA 90 bp | CCCCAAAGCCATTATCAGTGGAAGAATAGTCAGGCAAAACAGAGATaGCAGTTAAGGAATGGACAGAATATTATTGGCACATGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PQSHYQWKNSQAKQR*QLRNGQNIIGTCPA Trigger: AGCTGGGCATGTGCCAATAATATTCTGTCCATTCCTTAACTGCCATCTCTGTTTTGCCTGACTATTCTTCCACTGATAATGGCTTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR CCA 90 bp | ATGAAGAAAGGGAGGAGATGGCAATTCAAAGTAGACAGTTCTCACTaGAGCCTAGAACACTTTATTAGAAACCAAGAATATCACAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: MKKGRRWQFKVDSSH*SLEHFIRNQEYHRQ Trigger: TTGCCTGTGATATTCTTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTGCCATCTCCTCCCTTTCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR TCA 90 bp | ACATGTGTTTACTTGATGATACTCATGACAGAGTGTAAACTGGACTaGGCACATTCTACTCAACTGGTATCAAATCAACACATCAATGCT | + |
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Preference number: 1 (lower is better) Translates to: TCVYLMILMTECKLD*AHSTQLVSNQHINA Trigger: AGCATTGATGTGTTGATTTGATACCAGTTGAGTAGAATGTGCTCAGTCCAGTTTACACTCTGTCATGAGTATCATCAAGTAAACACATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTACACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGAAAGAGGGCAAAAAGTaGGCCAGTGGGATGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GYTTQAYAVHPAHWATLLKEGKK*ASGMAK Trigger: CTTTGCCATCCCACTGGCCCACTTTTTGCCCTCTTT...CAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTGTACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGGACTGATTGCCCAAGTGTCCACATCTTCAGGATCTGACCACACCAAGTCAGGAGATAAACCGCCATaGACACACAAAATCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGLIAQVSTSSGSDHTKSGDKPP*THKICS Trigger: TGAGCAGATTTTGTGTGTTCATGGCGGTTTATCTCC...TGACTTGGTGTGGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATAAAGAGGGCAAAAAGTaGGCCAGTGGGATGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDKEGKK*ASGMAK Trigger: CTTTGCCATCCCACTGGCCCACTTTTTGCCCTCTTT...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGGTCCATCCTGCCCACTaGGCAACTTTGCTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LTYGKLAKSLSANEEREEVHPAH*ATLLLK Trigger: TTTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGAC...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGAAAGAGGGCAAAAAGTaGGCCAGTGGGATGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LTYGKLAKSLSANEEREEKEGKK*ASGMAK Trigger: CTTTGCCATCCCACTGGCCCACTTTTTGCCCTCTTT...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTCTCGTATTGACATCTTTGAAGACCATGATGGAAGCAATGTTTCCACAGCCTTCGTGCACAAGCTaGTGTGCTCTGCAGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: GSLVLTSLKTMMEAMFPQPSCTS*CALQMS Trigger: ACTCATCTGCAGAGCACATCAGCTTGTGCACGAAGG...CTGTGGAAACATTGCTTCCATCATGGTCTTCAAAGATGTCAATACGAGAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATAACACGTTCTGAATCTGGAACTGCTCGGAATAACTTTGGTTCTCTCGTAGAGCAGACCACACTGTaGCCAGCTTCTCGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: GITRSESGTARNNFGSLVEQTTL*PASRQT Trigger: TGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTC...TACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACGTGTTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGCTACACAATTAAAAACTGTACAAGGAGGTGGGTGGTTGGGGACAAATATATGCAGTCCATCCTaGCCACTGGGCAACTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: HRATQLKTVQGGGWLGTNICSPS*PLGNFA Trigger: AGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATAT...ATTTGTCCCCAACCACCCACCTCCTTGTACAGTTTTTAATTGTGTAGCTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCCAAACGAGTCCAAGGTaGGGTAGGAGGAGTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: LPNKNRRLADTNEEDFQVQTSPR*GRRSDK Trigger: TTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTG...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAGACCACACTGTGACCAGCTTCTCGTCAAACATAAACTTATAGCCTTCCACATCTTCAGGATCTaGCCACACCAAGTCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: RSRPHCDQLLVKHKLIAFHIFRI*PHQVTK Trigger: TTTTGTGACTTGGTGTGGTCAGATCCTGAAGATGTG...GAAGGCTATAAGTTTATGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTGTCAATTGGCTTTTTATATGCAGTCCATCCTaGCCACTGGGCAACTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RLADTNEEDFQVIVNWLFICSPS*PLGNFA Trigger: AGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATAT...AAAAAGCCAATTGACAATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATACAAAAACAGAAGGCTaGCTGATACAAATGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDTKTEG*LIQMRR Trigger: CCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGT...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGCAGGCAAAACAGAGATaGCAGTTAAGGAATGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LTYGKLAKSLSANEEREEQAKQR*QLRNGQ Trigger: CTGTCCATTCCTTAACTGCCATCTCTGTTTTGCCTG...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR TCA 90 bp | GTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGCATTTTCCAACACGAGTGTAAACTGGACTaGGCACATTCTACTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: VILLLTMAGFHSTGIFQHECKLD*AHSTQL Trigger: CAGTTGAGTAGAATGTGCTCAGTCCAGTTTACACTC...GTGTTGGAAAATGCCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR CAA 90 bp | CGTTCTGAATCTGGAACTGCTCGGAATAACTTTGGTTCTCTCGTATaGACATCTTTGAAGACCATGATGGAAGCAATGTTTCCACAGCGA | + |
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Preference number: 2 (lower is better) Translates to: RSESGTARNNFGSLV*TSLKTMMEAMFPQR Trigger: TCGCTGTGGAAACATTGCTTCCATCATGGTCTTCAAAGATGTCAATACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR CCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCAGGGTACAAGAAAGTTaGGGTAAAAGAGGGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LPNKNRRLADTNEEDFQVRVQES*GKRGQK Trigger: TTTTTGCCCTCTTTTACCCCAACTTTCTTGTACCCT...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTCAAAGTAGACAGTTCTCACTGGAGCCTAGAACACTTTATTAGAAACCAACAAACGAGTCCAAGGTaGGGTAGGAGGAGTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: QFKVDSSHWSLEHFIRNQQTSPR*GRRSDK Trigger: TTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTG...TTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR TCA 90 bp | GGAATAACACGTTCTGAATCTGGAACTGCTCGGAATAACTTTGGTTCTCTCGTATTTGATCCAGTGTTTTaGTATCAGGAGATAAACCGC | + |
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Preference number: 2 (lower is better) Translates to: GITRSESGTARNNFGSLVFDPVF*YQEINR Trigger: GCGGTTTATCTCCTGATATCAAAACACTGGATCAAA...TACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACGTGTTATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR GCA 90 bp | GTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGCATTTTCCAACACGAACAGATGCTAAAGTaGTTTATCAATCGACTTCAC | + |
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Preference number: 2 (lower is better) Translates to: VILLLTMAGFHSTGIFQHEQMLK*FINRLH Trigger: GTGAAGTCGATTGATAAAGCACTTTAGCATCTGTTC...GTGTTGGAAAATGCCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR GCA 90 bp | GAATCTGACAAAAGTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGAAACTACTTTTTCCATaGCCCAAAGCCATTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: ESDKSDSTSDNGRLSQYRKLLFP*PKAIIS Trigger: ACTGATAATGGCTTTGGGGCATGGAAAAAGTAGTTT...CCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCACTTTTGTCAGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTATCAATCGACTTCACATGGATTTCCTAGGATGACAAGAAATTATAAAGGGACAAAAACAGAAGGCTaGCTGATACAAATGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LYQSTSHGFPRMTRNYKGTKTEG*LIQMRR Trigger: CCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGT...CCCTTTATAATTTCTTGTCATCCTAGGAAATCCATGTGAAGTCGATTGATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAAAACAGAGATGGCAGTTAAGGAATGGACAGAATATTATTGGCACATGCACATTCTACTCAACTaGTATCAAATCAACACATCA | + |
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Preference number: 2 (lower is better) Translates to: SGKTEMAVKEWTEYYWHMHILLN*YQINTS Trigger: TGATGTGTTGATTTGATACCAGTTGAGTAGAATGTG...CATGTGCCAATAATATTCTGTCCATTCCTTAACTGCCATCTCTGTTTTGCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTATCAATCGACTTCACATGGATTTCCTAGGATGACAAGAAATTATAAAGGGAGGGTACAAGAAAGTTaGGGTAAAAGAGGGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LYQSTSHGFPRMTRNYKGRVQES*GKRGQK Trigger: TTTTTGCCCTCTTTTACCCCAACTTTCTTGTACCCT...CCCTTTATAATTTCTTGTCATCCTAGGAAATCCATGTGAAGTCGATTGATAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | CAATTCAAAGTAGACAGTTCTCACTGGAGCCTAGAACACTTTATTAGAAACCAACACAAAGCTGAAATATaGTATGACAGACCTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QFKVDSSHWSLEHFIRNQHKAEI*YDRPSQ Trigger: TTGTGAAGGTCTGTCATACCATATTTCAGCTTTGTG...TTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CCA 90 bp | CAATTCAAAGTAGACAGTTCTCACTGGAGCCTAGAACACTTTATTAGAAACCAAATGGCAGTTAAGGAATaGACAGAATATTATTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: QFKVDSSHWSLEHFIRNQMAVKE*TEYYWH Trigger: GTGCCAATAATATTCTGTCCATTCCTTAACTGCCAT...TTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR GCA 72 bp | ACAGCCGGGTTGACAAGGGTACACGACTCAGGCATATaGAGTCCATCCTGCCCACTGGGCAACTTTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: TAGLTRVHDSGI*SPSCPLGNFAA Trigger: AGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTGTACCCTTGTCAACCCGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| 3UTR TCA 72 bp | CTTTTGCTCCAAATAGCCAACCTGCTCCTCTGGGACTaGTTGCCCAAGTGTCCACATCTTCAGGATCTGACC | + |
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Preference number: 3 (lower is better) Translates to: LLLQIANLLLWD*LPKCPHLQDLT Trigger: GGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGAGCAGGTTGGCTATTTGGAGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR TCA 72 bp | GGGACTGATTGCCCAAGTGTCCACATCTTCAGGATCTaGCCACACCAAGTCACAAAATGCTCCTTTGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GTDCPSVHIFRI*PHQVTKCSFVR Trigger: CCTCACAAAGGAGCATTTTGTGACTTGGTGTGGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| 3UTR-3UTR CAA 90 bp | GTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGCATTTTCCAACACCTACAGATCTCTGGCTaGCAAGTATCTCCCACAAGA | + |
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Preference number: 3 (lower is better) Translates to: VILLLTMAGFHSTGIFQHLQISG*QVSPTR Trigger: TCTTGTGGGAGATACTTGCAAGCCAGAGATCTGTAG...GTGTTGGAAAATGCCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR GCA 72 bp | TGGCAGTTAAGGAATGGACAGAATATTATTGGCACATaGCCAGCTAGTGACAAACAAATGCAGTACACCATG | + |
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Preference number: 3 (lower is better) Translates to: WQLRNGQNIIGT*PASDKQMQYTM Trigger: CATGGTGTACTGCATTTGTTTGTCACTAGCTGGGCATGTGCCAATAATATTCTGTCCATTCCTTAACTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CAA 90 bp | GAATCTGACAAAAGTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGGAAGTGGAAAGGGGATaGAGAGTTACTGGTTTAACT | + |
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Preference number: 3 (lower is better) Translates to: ESDKSDSTSDNGRLSQYREVERG*RVTGLT Trigger: AGTTAAACCAGTAACTCTCAATCCCCTTTCCACTTC...CCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCACTTTTGTCAGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR CCA 72 bp | CAGAGTGTAAACTGGACTGAGCACATTCTACTCAACTaGTATCAAATCAACACATCAATGCTACAAGTATTA | + |
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Preference number: 3 (lower is better) Translates to: QSVNWTEHILLN*YQINTSMLQVL Trigger: TAATACTTGTAGCATTGATGTGTTGATTTGATACCAGTTGAGTAGAATGTGCTCAGTCCAGTTTACACTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCTTCAGATTATACTTCACAAACACAAGGGTTCTGATTGTTCAGCCTTTAAAAGTACATGTGTTTACTaGATGATACTCATGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLQIILHKHKGSDCSAFKSTCVY*MILMTE Trigger: CTCTGTCATGAGTATCATCAAGTAAACACATGTACT...TTTAAAGGCTGAACAATCAGAACCCTTGTGTTTGTGAAGTATAATCTGAAGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR-3UTR CAA 90 bp | CAATTCAAAGTAGACAGTTCTCACTGGAGCCTAGAACACTTTATTAGAAACCAAGCAGTACACCATGACTaGAAAATAAGTCACATTACA | + |
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Preference number: 3 (lower is better) Translates to: QFKVDSSHWSLEHFIRNQAVHHD*KISHIT Trigger: TGTAATGTGACTTATTTTCAAGTCATGGTGTACTGC...TTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| 3UTR GCA 72 bp | TACTGCAGAGCTGTTCAAAAACCACACCAAGTTGTCTaGATCATTAATTCCAGTGTTTCACAATTAGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: YCRAVQKPHQVV*IINSSVSQLVK Trigger: TTTTACTAATTGTGAAACACTGGAATTAATGATGCAGACAACTTGGTGTGGTTTTTGAACAGCTCTGCAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| CDS-3UTR TCA 90 bp | CACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCTGAAGAGCAGACCACACTGTaGCCAGCTTCTCGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: HDSGICSPSCPLGNFAAEEQTTL*PASRQT Trigger: TGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTC...TTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
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| CDS-3UTR GCA 90 bp | GGGTACACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGTCCTCTGGGACTGATTaGCCAAGTGTCCACATCTTC | + |
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Preference number: 4 (lower is better) Translates to: GYTTQAYAVHPAHWATLLSSGTD*PSVHIF Trigger: GAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGA...CAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
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| CDS-3UTR TCA 90 bp | GGGTACACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCACATCTTCAGGATCTaGCCACACCAAGTCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: GYTTQAYAVHPAHWATLLHIFRI*PHQVTK Trigger: TTTTGTGACTTGGTGTGGTCAGATCCTGAAGATGTG...CAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
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| CDS-3UTR TCA 90 bp | CACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCTGAAAGGAATAACACGTTCTaGATCTGGAACTGCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: HDSGICSPSCPLGNFAAERNNTF*IWNCSE Trigger: TTCCGAGCAGTTCCAGATTCAGAACGTGTTATTCCT...TTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
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| 3UTR CAA 72 bp | ATCATCCAACAAAGGACAGTGAGGTTTACAGCCGGGTaGACAAGGGTACACGACTCAGGCATATGCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIQQRTVRFTAG*TRVHDSGICSP Trigger: TGGACTGCATATGCCTGAGTCGTGTACCCTTGTCAACCCGGCTGTAAACCTCACTGTCCTTTGTTGGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| CDS-3UTR GCA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGGGAAGGTACTTGCACTaGCGCGCTATCTCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYGKLAKSLSANEEREEGRYLH*RAISTY Trigger: GTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCC...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGACCACACTGTGACCAGCTTCTCGTCAAACATAAACTTATAGCCTTCGGAAGGTACTTGCACTaGCGCGCTATCTCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSRPHCDQLLVKHKLIAFGRYLH*RAISTY Trigger: GTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCC...GAAGGCTATAAGTTTATGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR TCA 90 bp | AGGAGCAGACCACACTGTGACCAGCTTCTCGTCAAACATAAACTTATAGCCTTCCACTGTTACTGGCGTTaGCACTGGCTGAACATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSRPHCDQLLVKHKLIAFHCYWR*HWLNIR Trigger: TCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTG...GAAGGCTATAAGTTTATGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR TCA 90 bp | CACAGAGCTACACAATTAAAAACTGTACAAGGAGGTGGGTGGTTGGGGACAAATGAGCAGACCACACTGTaGCCAGCTTCTCGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HRATQLKTVQGGGWLGTNEQTTL*PASRQT Trigger: TGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTC...ATTTGTCCCCAACCACCCACCTCCTTGTACAGTTTTTAATTGTGTAGCTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTGTCAATTGGCTTTTTCCTTCGTGCACAAGCTaGTGTGCTCTGCAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLADTNEEDFQVIVNWLFPSCTS*CALQMS Trigger: ACTCATCTGCAGAGCACATCAGCTTGTGCACGAAGG...AAAAAGCCAATTGACAATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | CCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTCCTTCGTGCACAAGCTaGTGTGCTCTGCAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PNKNRRLADTNEEDFQVIPSCTS*CALQMS Trigger: ACTCATCTGCAGAGCACATCAGCTTGTGCACGAAGG...AATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATAGGAATAACACGTTCTaGATCTGGAACTGCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDRNNTF*IWNCSE Trigger: TTCCGAGCAGTTCCAGATTCAGAACGTGTTATTCCT...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTGTCAATTGGCTTTTTGGAAGGTACTTGCACTaGCGCGCTATCTCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RLADTNEEDFQVIVNWLFGRYLH*RAISTY Trigger: GTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCC...AAAAAGCCAATTGACAATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTGTCAATTGGCTTTTTCACTGTTACTGGCGTTaGCACTGGCTGAACATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLADTNEEDFQVIVNWLFHCYWR*HWLNIR Trigger: TCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTG...AAAAAGCCAATTGACAATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| 3UTR CAA 72 bp | GGGAGTAGCAGATTCCCTCGCCTACAGATCTCTGGCTaGCAAGTATCTCCCACAAGATTACTCTGTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: GSSRFPRLQISG*QVSPTRLLCII Trigger: TATTATACAGAGTAATCTTGTGGGAGATACTTGCAAGCCAGAGATCTGTAGGCGAGGGAATCTGCTACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | GTGATTCTACTTCTGACAATGGCAGGCTTTCACAGTACAGGCATTTTCCAACACGGAGATAAACCGCCATaGACACACAAAATCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VILLLTMAGFHSTGIFQHGDKPP*THKICS Trigger: TGAGCAGATTTTGTGTGTTCATGGCGGTTTATCTCC...GTGTTGGAAAATGCCTGTACTGTGAAAGCCTGCCATTGTCAGAAGTAGAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCGGAGATAAACCGCCATaGACACACAAAATCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPNKNRRLADTNEEDFQVGDKPP*THKICS Trigger: TGAGCAGATTTTGTGTGTTCATGGCGGTTTATCTCC...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCCACATCTTCAGGATCTaGCCACACCAAGTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPNKNRRLADTNEEDFQVHIFRI*PHQVTK Trigger: TTTTGTGACTTGGTGTGGTCAGATCCTGAAGATGTG...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGCAAAACAGAGATGGCAGTTAAGGAATGGACAGAATATTATTGGCACATGCCTGACCTCCAGTTCTaGACAGTTCACAAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKTEMAVKEWTEYYWHMPDLQF*TVHKDH Trigger: ATGATCTTTGTGAACTGTTCAGAACTGGAGGTCAGG...CATGTGCCAATAATATTCTGTCCATTCCTTAACTGCCATCTCTGTTTTGCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGTTAAAGCTGCTACTGTaGGCATATCAAAAACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYGKLAKSLSANEEREELKLLL*AYQKLW Trigger: CCAAAGTTTTTGATATGCTCACAGTAGCAGCTTTAA...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCTTTGATCCAGTGTTTTaGTATCAGGAGATAAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPNKNRRLADTNEEDFQVFDPVF*YQEINR Trigger: GCGGTTTATCTCCTGATATCAAAACACTGGATCAAA...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR GCA 90 bp | CAATTCAAAGTAGACAGTTCTCACTGGAGCCTAGAACACTTTATTAGAAACCAATCCTCTGGGACTGATTaGCCAAGTGTCCACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFKVDSSHWSLEHFIRNQSSGTD*PSVHIF Trigger: GAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGA...TTGGTTTCTAATAAAGTGTTCTAGGCTCCAGTGAGAACTGTCTACTTTGAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR CCA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCTTTCCATATTTGGTTTaGCACTCATCTGTCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPNKNRRLADTNEEDFQVFPYLV*HSSVRV Trigger: TACACGGACAGATGAGTGCCAAACCAAATATGGAAA...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR TCA 90 bp | CTTTATCAATCGACTTCACATGGATTTCCTAGGATGACAAGAAATTATAAAGGGCACTGTTACTGGCGTTaGCACTGGCTGAACATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LYQSTSHGFPRMTRNYKGHCYWR*HWLNIR Trigger: TCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTG...CCCTTTATAATTTCTTGTCATCCTAGGAAATCCATGTGAAGTCGATTGATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCAGATTATACTTCACAAACACAAGGGTTCTGATTGTTCAGCCTTTAAATTTGTGTCAGGAACCTaGCCTCCAGTTCTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQIILHKHKGSDCSAFKFVSGT*PPVLNS Trigger: ACTGTTCAGAACTGGAGGTCAGGTTCCTGACACAAA...TTTAAAGGCTGAACAATCAGAACCCTTGTGTTTGTGAAGTATAATCTGAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR TCA 90 bp | CCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTTTTGATCCAGTGTTTTaGTATCAGGAGATAAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PNKNRRLADTNEEDFQVIFDPVF*YQEINR Trigger: GCGGTTTATCTCCTGATATCAAAACACTGGATCAAA...AATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTGTCAATTGGCTTTTTTTAAAGCTGCTACTGTaGGCATATCAAAAACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLADTNEEDFQVIVNWLFLKLLL*AYQKLW Trigger: CCAAAGTTTTTGATATGCTCACAGTAGCAGCTTTAA...AAAAAGCCAATTGACAATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | GGGTACACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGACACTGTTACTGGCGTaGACACTGGCTGAACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: GYTTQAYAVHPAHWATLLTLLLA*TLAEHS Trigger: CGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGT...CAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCTGAAACACTGTTACTGGCGTaGACACTGGCTGAACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: HDSGICSPSCPLGNFAAETLLLA*TLAEHS Trigger: CGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGT...TTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATGCTATCTCCACATACTaGTCCAGATCCAGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDAISTY*SRSSGA Trigger: GGCGCCGCTGGATCTGGACAAGTATGTGGAGATAGC...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATTTCTCGGGAAGGTACTaGCACTGCCGCGCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDFSGRY*HCRAIS Trigger: GGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAGAA...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | TTGACCTATGGAAAGCTAGCCAAGAGTCTATCAGCCAATGAAGAAAGGGAGGAGGCTATCTCCACATACTaGTCCAGATCCAGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTYGKLAKSLSANEEREEAISTY*SRSSGA Trigger: GGCGCCGCTGGATCTGGACAAGTATGTGGAGATAGC...CTCCTCCCTTTCTTCATTGGCTGATAGACTCTTGGCTAGCTTTCCATAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS TCA 90 bp | GGCACTCATCTGTCCGTGTATGTCACCACACACTGTTACTGGCGTTaGCACTGGCTGAACATTCGACTCTTCCAAGAGCAGATCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTHLSVYVTTHCYWR*HWLNIRLFQEQITN Trigger: GTTTGTGATCTGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACATACACGGACAGATGAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAGCTACACAATTAAAAACTGTACAAGGAGGTGGGTGGTTGGGGACAAATTTCTCGGGAAGGTACTaGCACTGCCGCGCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRATQLKTVQGGGWLGTNFSGRY*HCRAIS Trigger: GGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAGAA...ATTTGTCCCCAACCACCCACCTCCTTGTACAGTTTTTAATTGTGTAGCTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR CAA 90 bp | GATCTGACCACACCAAGTCACAAAATGCTCCTTTGTGAGGAATTTCCTGATTTCGCTATCTCCACATACTaGTCCAGATCCAGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLTTPSHKMLLCEEFPDFAISTY*SRSSGA Trigger: GGCGCCGCTGGATCTGGACAAGTATGTGGAGATAGC...GAAATCAGGAAATTCCTCACAAAGGAGCATTTTGTGACTTGGTGTGGTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR CAA 90 bp | CACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCTGAAAGCATATCAAAAACTTaGGTACAGTATCTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HDSGICSPSCPLGNFAAESISKT*VQYLQA Trigger: TGCCTGGAGATACTGTACCAAAGTTTTTGATATGCT...TTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CACGACTCAGGCATATGCAGTCCATCCTGCCCACTGGGCAACTTTGCTGCTGAATTTGGTTCTCTCGTATaGACATCTTTGAAGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: HDSGICSPSCPLGNFAAEFGSLV*TSLKTM Trigger: CATGGTCTTCAAAGATGTCAATACGAGAGAACCAAA...TTCAGCAGCAAAGTTGCCCAGTGGGCAGGATGGACTGCATATGCCTGAGTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCATTACACTGTTACTGGCGTaGACACTGGCTGAACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNKNRRLADTNEEDFQVITLLLA*TLAEHS Trigger: CGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGT...AATGACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATCTCGTATTGACATCTTaGAAGACCATGATGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDLVLTS*KTMMEA Trigger: TGCTTCCATCATGGTCTTCAAAGATGTCAATACGAG...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTCTTCTCAAACGAGTCCAAGGTGGGGTAGGAGGAGTGACAAAACTGATTTTGGTTCTCTCGTATaGACATCTTTGAAGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LKSSQTSPRWGRRSDKTDFGSLV*TSLKTM Trigger: CATGGTCTTCAAAGATGTCAATACGAGAGAACCAAA...ATCAGTTTTGTCACTCCTCCTACCCCACCTTGGACTCGTTTGAGAAGACTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028087.6 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAGCTACACAATTAAAAACTGTACAAGGAGGTGGGTGGTTGGGGACAAATCTCGTATTGACATCTTaGAAGACCATGATGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRATQLKTVQGGGWLGTNLVLTS*KTMMEA Trigger: TGCTTCCATCATGGTCTTCAAAGATGTCAATACGAG...ATTTGTCCCCAACCACCCACCTCCTTGTACAGTTTTTAATTGTGTAGCTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS-3UTR CAA 90 bp | CTACCAAACAAAAACAGAAGGCTGGCTGATACAAATGAGGAGGACTTCCAAGTCAGCATATCAAAAACTTaGGTACAGTATCTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPNKNRRLADTNEEDFQVSISKT*VQYLQA Trigger: TGCCTGGAGATACTGTACCAAAGTTTTTGATATGCT...GACTTGGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS-3UTR CAA 90 bp | GGAATAACACGTTCTGAATCTGGAACTGCTCGGAATAACTTTGGTTCTCTCGTAATTTCCATATTTGGTTaGGCACTCATCTGTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GITRSESGTARNNFGSLVISIFG*ALICPC Trigger: ACACGGACAGATGAGTGCCAAACCAAATATGGAAAT...TACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACGTGTTATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR CAA 90 bp | GATCTGACCACACCAAGTCACAAAATGCTCCTTTGTGAGGAATTTCCTGATTTCTTAGCATTTCCATATTaGGTTTGGCACTCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLTTPSHKMLLCEEFPDFLAFPY*VWHSSV Trigger: GACAGATGAGTGCCAAACCAAATATGGAAATGCTAA...GAAATCAGGAAATTCCTCACAAAGGAGCATTTTGTGACTTGGTGTGGTCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
||
| CDS-3UTR CAA 90 bp | CTTTATCAATCGACTTCACATGGATTTCCTAGGATGACAAGAAATTATAAAGGGAGCATATCAAAAACTTaGGTACAGTATCTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYQSTSHGFPRMTRNYKGSISKT*VQYLQA Trigger: TGCCTGGAGATACTGTACCAAAGTTTTTGATATGCT...CCCTTTATAATTTCTTGTCATCCTAGGAAATCCATGTGAAGTCGATTGATAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
||
| CDS GCA 72 bp | AGCCTCTTCAGGTCGTTCTCGGGAAGGTACTTGCACTaGCGCGCTATCTCCACATACTTGTCCAGATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLFRSFSGRYLH*RAISTYLSRSS Trigger: GCTGGATCTGGACAAGTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAGAACGACCTGAAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS GCA 72 bp | CACATAGCCTCTTCAGGTCGTTCTCGGGAAGGTACTTaGACTGCCGCGCTATCTCCACATACTTGTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HIASSGRSREGT*TAALSPHTCPD Trigger: ATCTGGACAAGTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAGAACGACCTGAAGAGGCTATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS CAA 72 bp | TCACATAGCCTCTTCAGGTCGTTCTCGGGAAGGTACTaGCACTGCCGCGCTATCTCCACATACTTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHSLFRSFSGRY*HCRAISTYLSR Trigger: TCTGGACAAGTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAGAACGACCTGAAGAGGCTATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS TCA 72 bp | CTGTCCGTGTATGTCACCACACACTGTTACTGGCGTTaGCACTGGCTGAACATTCGACTCTTCCAAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSVYVTTHCYWR*HWLNIRLFQEQ Trigger: CTGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACATACACGGACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
||
| CDS CAA 72 bp | ACTGTCCGTGTATGTCACCACACACTGTTACTGGCGTaGACACTGGCTGAACATTCGACTCTTCCAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: TVRVCHHTLLLA*TLAEHSTLPRA Trigger: TGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACATACACGGACAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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| CDS CAA 72 bp | TCTGTCCGTGTATGTCACCACACACTGTTACTGGCGTaGACACTGGCTGAACATTCGACTCTTCCAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVRVCHHTLLLA*TLAEHSTLPRA Trigger: TGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACATACACGGACAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| CDS CAA 90 bp | TGGCACTCATCTGTCCGTGTATGTCACCACACACTGTTACTGGCGTaGACACTGGCTGAACATTCGACTCTTCCAAGAGCAGATCACAAA | + |
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Preference number: 6 (lower is better) Translates to: WHSSVRVCHHTLLLA*TLAEHSTLPRADHK Trigger: TTTGTGATCTGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACATACACGGACAGATGAGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| CDS TCA 72 bp | ATGTCACCACACACTGTTACTGGCGTTGACACTGGCTaGACATTCGACTCTTCCAAGAGCAGATCACAAACA | + |
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Preference number: 6 (lower is better) Translates to: MSPHTVTGVDTG*TFDSSKSRSQT Trigger: TGTTTGTGATCTGCTCTTGGAAGAGTCGAATGTTCAGCCAGTGTCAACGCCAGTAACAGTGTGTGGTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028087.6 ENSMUST00000204257.3 ENSMUST00000204701.3 |
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| CDS CAA 72 bp | TTGGTACAGTATCTCCAGGCATTAGCATTTCCATATTaGGTTTGGCACTCATCTGTCCGTGTATGTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: LVQYLQALAFPY*VWHSSVRVCHH Trigger: GTGGTGACATACACGGACAGATGAGTGCCAAACCAAATATGGAAATGCTAATGCCTGGAGATACTGTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204257.3 |
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| CDS TCA 72 bp | ATATGTAGTTTGTGTCAGGAACCTGACCTCCAGTTCTaGACAGTTCACAAAGATCATAAAACTGTCCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: ICSLCQEPDLQF*TVHKDHKTVRV Trigger: TACACGGACAGTTTTATGATCTTTGTGAACTGTTCAGAACTGGAGGTCAGGTTCCTGACACAAACTACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028087.6 |
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