Pregenerated sensors for PPP5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003099Ensembl transcript IDs: ENSMUST00000003183.12, ENSMUST00000142597.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTaGCCAGGAGCCTGTCGTCTGCTGCCCCACGCTGCCCCCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSKCPGCALPPVSFL*PGACRLLPHAAPTP Trigger: GGGGGTGGGGGCAGCGTGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTGAGCCTGTCGTCTGCTaGCCCACGCTGCCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPEPVVC*PTLPPP Trigger: GGGTGGGGGCAGCGTGGGGCAGCAGACGACAGGCTC...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTGGCAAGACCTCCTCTTaGCCCCACCCCTACCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPGKTSS*PHPYPG Trigger: GCCTGGGTAGGGGTGGGGCCAAGAGGAGGTCTTGCC...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTCACCCCTACCCAGGCTaGCCTTCCTCCAAATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPHPYPG*PSSKCP Trigger: TGGGCATTTGGAGGAAGGCCAGCCTGGGTAGGGGTG...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGAGCCTGTCGTCTGCTaGCCCACGCTGCCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGEPVVC*PTLPPP Trigger: GGGTGGGGGCAGCGTGGGGCAGCAGACGACAGGCTC...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTGAGGAGCCATGCAGGTaGAGGGGCAAGACCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFEEPCR*RGKTSS Trigger: AGAGGAGGTCTTGCCCCTTCACCTGCATGGCTCCTC...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTTGGCCTTCCTCCAAATaGCCAGGCTGTGCCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFWPSSK*PGCALP Trigger: AGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCCA...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTCAAATGCCCAGGCTGTaGCCTACCTCCAGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFQMPRL*PTSSLL Trigger: AAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTG...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTGGGCAAGACCTCCTCTaGGCCCCACCCCTACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPGQDLL*APPLPR Trigger: CCTGGGTAGGGGTGGGGCCAAGAGGAGGTCTTGCCC...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| 3UTR TCA 72 bp | TGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTaGCCAGGAGCCTGTCGTCTGCTGCCCCACGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: CPGCALPPVSFL*PGACRLLPHAA Trigger: GGCAGCGTGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR GCA 72 bp | CAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTaGCCCACGCTGCCCCCACCCCCTCTGCAACCTAAA | + |
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Preference number: 3 (lower is better) Translates to: QSPFSDQEPVVC*PTLPPPPLQPK Trigger: TTTAGGTTGCAGAGGGGGTGGGGGCAGCGTGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| 3UTR GCA 72 bp | CTACCCAGGCTGGCCTTCCTCCAAATGCCCAGGCTGTaGCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LPRLAFLQMPRL*PTSSLLSLTRS Trigger: GCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCCAGCCTGGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACCCGGAACTTGCCCAGTaGCATGTTGCTGGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHPELAQ*HVAGRP Trigger: CGGGCGGCCAGCAACATGGCACTGGGCAAGTTCCGG...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTCCGGAACTTGCCCAGTaGCATGTTGCTGGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTPELAQ*HVAGRP Trigger: CGGGCGGCCAGCAACATGGCACTGGGCAAGTTCCGG...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACCCAGGAAGGCCTTGGTaGCATCAGGCCCAAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHPGRPW*HQAQTG Trigger: GCCAGTTTGGGCCTGATGTCACCAAGGCCTTCCTGG...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACGGGCAGAAAAGACAGTaGCACAGCGGCCACCATGGG | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHGQKRQ*HSGHHG Trigger: CCCATGGTGGCCGCTGTGTCACTGTCTTTTCTGCCC...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACGGCACTGCTGTGAATTaGTGGAACTGGGGCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHGTAVN*WNWGRR Trigger: CCTGCGGCCCCAGTTCCACCAATTCACAGCAGTGCC...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACGCAGGTAGGCCAGGCTaGGGTTGCCATAGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHAGRPG*GCHSRW Trigger: CCATCTACTATGGCAACCGCAGCCTGGCCTACCTGC...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACACTGCTGTGAATTGGTaGAACTGGGGCCGCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHTAVNW*NWGRRS Trigger: CGACCTGCGGCCCCAGTTCCACCAATTCACAGCAGT...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTCTGTGGCTGGGGATCTaGCCACAGCAGGTCACACAT | + |
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Preference number: 4 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTLWLGI*PQQVTH Trigger: ATGTGTGACCTGCTGTGGTCAGATCCCCAGCCACAG...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACAGGCCAGGCTGCGGTTaGCATAGTAGATGGCATTGC | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHRPGCG*HSRWHC Trigger: GCAATGCCATCTACTATGGCAACCGCAGCCTGGCCT...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTACAGCAGGTCACACATaGGACCTGAGTCTGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTTAGHT*DLSLGA Trigger: AGCCCCCAGACTCAGGTCCCATGTGTGACCTGCTGT...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTGGTTGCCATAGTAGATaGCATTGCCGGGGTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTGCHSR*HCRGST Trigger: AGTTGAACCCCGGCAATGCCATCTACTATGGCAACC...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTTGTCTTGAGCTCCTCTaGCCGCTTCAGAGTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPCLELL*PLQSAI Trigger: GATGGCACTCTGAAGCGGGCAGAGGAGCTCAAGACA...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTTGTGGCGTCGCCCAGTaGATAGCCATAGCACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPCGVAQ*IAIALS Trigger: ACTGAGTGCTATGGCTATGCACTGGGCGACGCCACA...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTGCCCAGTGCCATGTTaGTGGCCGCCCGGCGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSCPVPC*WPPGGS Trigger: ACTACCGCCGGGCGGCCAGCAACATGGCACTGGGCA...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCCCAGTGCCATGTTGCTaGCCGCCCGGCGGTAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QAVPYLQSPFSDQEPVVCPVPCC*PPGGSS Trigger: GCTACTACCGCCGGGCGGCCAGCAACATGGCACTGG...GCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTATGTTGTCTGTCTCGTaGTTGCCTCGAAGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTMLSVS*LPRSRW Trigger: CCATCTACTTCGAGGCAACCACGAGACAGACAACAT...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTACTCGAACACCTCGCTaGAGAGCTCATACATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPTRTPR*RAHTSG Trigger: CCCAGATGTATGAGCTCTTCAGCGAGGTGTTCGAGT...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS-3UTR GCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCTGCCCGCTTCAGAGTaGCATCGGCCGGGGGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDLPASE*HRPGVR Trigger: ACGAACCCCCGGCCGATGGCACTCTGAAGCGGGCAG...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCGTGAATTGGTGGAACTaGGGCCGCAGGTCGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QAVPYLQSPFSDQEPVVCVNWWN*GRRSEP Trigger: GGGCTCCGACCTGCGGCCCCAGTTCCACCAATTCAC...GCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTCATAGTAGATGGCATTaGCGGGGTTCAACTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPHSRWH*RGSTRW Trigger: CCATCGAGTTGAACCCCGGCAATGCCATCTACTATG...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS-3UTR GCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACGGGCAGCCCGGAACTTaGCCAGTGCCATGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDGQPGT*PVPCCW Trigger: CCAGCAACATGGCACTGGGCAAGTTCCGGGCTGCCC...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTCCAGTGCCATGTTGCTaGCCGCCCGGCGGTAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGPVPCC*PPGGSS Trigger: GCTACTACCGCCGGGCGGCCAGCAACATGGCACTGG...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACGTGAATTGGTGGAACTaGGGCCGCAGGTCGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDVNWWN*GRRSEP Trigger: GGGCTCCGACCTGCGGCCCCAGTTCCACCAATTCAC...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACGGTGAGGCACTGCTGTaGATTGGTGGAACTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDGEALL*IGGTGA Trigger: GGCCCCAGTTCCACCAATTCACAGCAGTGCCTCACC...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGCGTATGCCATGGGCTTaGCATTGGGGTGAGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSRMPWA*HWGEAL Trigger: CAGTGCCTCACCCCAATGTCAAGCCCATGGCATACG...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCACTGCCCGCTTCAGAGTaGCATCGGCCGGGGGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHALPASE*HRPGVR Trigger: ACGAACCCCCGGCCGATGGCACTCTGAAGCGGGCAG...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGGGGCAGCCCGGAACTTaGCCAGTGCCATGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLPMAGSYCFTRGGAMQVGQPGT*PVPCCW Trigger: CCAGCAACATGGCACTGGGCAAGTTCCGGGCTGCCC...CACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCATCTGGGCTGTGTACTTaGCCTTCACCTCGCCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPSGLCT*PSPRPR Trigger: TCGAGGGCGAGGTGAAGGCCAAGTACACAGCCCAGA...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCAACAGCAGGTCACACATaGGACCTGAGTCTGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPTAGHT*DLSLGA Trigger: AGCCCCCAGACTCAGGTCCCATGTGTGACCTGCTGT...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTCCAGGAAGGCCTTGGTaGCATCAGGCCCAAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGPGRPW*HQAQTG Trigger: GCCAGTTTGGGCCTGATGTCACCAAGGCCTTCCTGG...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCATGTGGCGTCGCCCAGTaGATAGCCATAGCACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPCGVAQ*IAIALS Trigger: ACTGAGTGCTATGGCTATGCACTGGGCGACGCCACA...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGCCTGAGTCTGGGGGCTaGCGATTCCGCTCAATCTTT | + |
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Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSPESGG*RFRSIF Trigger: AAAGATTGAGCGGAATCGGCAGCCCCCAGACTCAGG...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCACCTGAGTCTGGGGGCTaGCGATTCCGCTCAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPPESGG*RFRSIF Trigger: AAAGATTGAGCGGAATCGGCAGCCCCCAGACTCAGG...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACTCTGGGCTGTGTACTTaGCCTTCACCTCGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDSGLCT*PSPRPR Trigger: TCGAGGGCGAGGTGAAGGCCAAGTACACAGCCCAGA...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACACTGCTGTGAATTGGTaGAACTGGGGCCGCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDTAVNW*NWGRRS Trigger: CGACCTGCGGCCCCAGTTCCACCAATTCACAGCAGT...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGGCACTGCTGTGAATTaGTGGAACTGGGGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGGTAVN*WNWGRR Trigger: CCTGCGGCCCCAGTTCCACCAATTCACAGCAGTGCC...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTCTGTGGCTGGGGATCTaGCCACAGCAGGTCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGLWLGI*PQQVTH Trigger: ATGTGTGACCTGCTGTGGTCAGATCCCCAGCCACAG...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGGCAGAAAAGACAGTaGCACAGCGGCCACCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHAGQKRQ*HSGHHG Trigger: CCCATGGTGGCCGCTGTGTCACTGTCTTTTCTGCCC...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGCCAGCGTGCTCAGCTTaGAGAGGACTTCTTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSPACSA*RGLLSP Trigger: AGGTGAAAGAAGTCCTCTGCAAGCTGAGCACGCTGG...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGAAGCGTGTTGGCGTATaGCATGGGCTTGACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSKRVGV*HGLDIG Trigger: CCCAATGTCAAGCCCATGGCATACGCCAACACGCTT...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCAAAGCGTGTTGGCGTATaGCATGGGCTTGACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPKRVGV*HGLDIG Trigger: CCCAATGTCAAGCCCATGGCATACGCCAACACGCTT...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCAACATCAGGCCCAAACTaGCAACTCACACCACGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPTSGPN*QLTPRL Trigger: CAAGCGTGGTGTGAGTTGCCAGTTTGGGCCTGATGT...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCACCTGACTGTAGAACTTaGTCGCGTTCTCGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPPDCRT*SRSRSP Trigger: AGGACTACGAGAACGCGATCAAGTTCTACAGTCAGG...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTGGTGAGGCACTGCTGTaGATTGGTGGAACTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFGEALL*IGGTGA Trigger: GGCCCCAGTTCCACCAATTCACAGCAGTGCCTCACC...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCACGTATGCCATGGGCTTaGCATTGGGGTGAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHARMPWA*HWGEAL Trigger: CAGTGCCTCACCCCAATGTCAAGCCCATGGCATACG...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTTGTCTTGAGCTCCTCTaGCCGCTTCAGAGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGCLELL*PLQSAI Trigger: GATGGCACTCTGAAGCGGGCAGAGGAGCTCAAGACA...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGCAGGTAGGCCAGGCTaGGGTTGCCATAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHAAGRPG*GCHSRW Trigger: CCATCTACTATGGCAACCGCAGCCTGGCCTACCTGC...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTCATCTTCAATGGTCATaGTTTCAATGTCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPHLQWS*FQCPES Trigger: ACTCTCTGGACATTGAAAGCATGACCATTGAAGATG...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
||
| CDS-3UTR TCA 90 bp | GGCCTTCCTCCAAATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCCTGACTGTAGAACTTaGTCGCGTTCTCGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPPNAQAVPYLQSPFSDPDCRT*SRSRSP Trigger: AGGACTACGAGAACGCGATCAAGTTCTACAGTCAGG...GTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCATTTGGAGGAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCAGGCGGTAGTAGCCTTTaGTGTACTTCTTGTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPGGSSL*CTSCQA Trigger: AGCTTGACAAGAAGTACATCAAAGGCTACTACCGCC...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAAGGCCAGGCTGCGGTTaGCATAGTAGATGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHARPGCG*HSRWHC Trigger: GCAATGCCATCTACTATGGCAACCGCAGCCTGGCCT...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCAAAGAGCTCATACATCTaGGCTGTGTACTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPKSSYI*AVYLAF Trigger: GAAGGCCAAGTACACAGCCCAGATGTATGAGCTCTT...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCAAGAGCTCATACATCTaGGCTGTGTACTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAVPYLQSPFSDQEPVVCKSSYI*AVYLAF Trigger: GAAGGCCAAGTACACAGCCCAGATGTATGAGCTCTT...GCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGCTTCATGGCTGCGGATaGTATAGTCCAGTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSLHGCG*YSPVDS Trigger: AGAATCAACTGGACTATATCATCCGCAGCCATGAAG...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAACATCAGGCCCAAACTaGCAACTCACACCACGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHATSGPN*QLTPRL Trigger: CAAGCGTGGTGTGAGTTGCCAGTTTGGGCCTGATGT...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTCACATCATTCCTAGCTaGAGAAGCGTGTTGGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGHIIPS*RSVLAY Trigger: ATACGCCAACACGCTTCTGCAGCTAGGAATGATGTG...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGCGGTAGTAGCCTTTaGTGTACTTCTTGTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHAGGSSL*CTSCQA Trigger: AGCTTGACAAGAAGTACATCAAAGGCTACTACCGCC...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR TCA 90 bp | GGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGCTTCATGGCTGCGGATaGTATAGTCCAGTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPMAGSYCFTRGGAMQVLHGCG*YSPVDS Trigger: AGAATCAACTGGACTATATCATCCGCAGCCATGAAG...CACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTGCCCCACATCTTCAATGGTCATaGTTTCAATGTCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSSLLSLTRSLSSAAPHLQWS*FQCPES Trigger: ACTCTCTGGACATTGAAAGCATGACCATTGAAGATG...TGGGGCAGCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTGGTTGCCATAGTAGATaGCATTGCCGGGGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFGCHSR*HCRGST Trigger: AGTTGAACCCCGGCAATGCCATCTACTATGGCAACC...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAATCTTGCTGCACTCCTaGTACTTCATCTTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSYGRVLLLYQGRSHAILLHS*YFILAS Trigger: GGATGCCAAGATGAAGTACCAGGAGTGCAGCAAGAT...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR GCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTCACATCATTCCTAGCTaGAGAAGCGTGTTGGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFHIIPS*RSVLAY Trigger: ATACGCCAACACGCTTCTGCAGCTAGGAATGATGTG...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTATGTTGTCTGTCTCGTaGTTGCCTCGAAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFMLSVS*LPRSRW Trigger: CCATCTACTTCGAGGCAACCACGAGACAGACAACAT...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACATCTGGGCTGTGTACTaGGCCTTCACCTCGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHIWAVY*AFTSPS Trigger: CGAGGGCGAGGTGAAGGCCAAGTACACAGCCCAGAT...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACAGGCACTGCTGTGAATaGGTGGAACTGGGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHRHCCE*VELGPQ Trigger: CTGCGGCCCCAGTTCCACCAATTCACAGCAGTGCCT...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CAA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTTCCTCCAGGAAGGCCTaGGTGACATCAGGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTSSRKA*VTSGPN Trigger: GTTTGGGCCTGATGTCACCAAGGCCTTCCTGGAGGA...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CAA 90 bp | GCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTAGCTGCAGAAGCGTGTaGGCGTATGCCATGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGQQAEGGAIQLGKSRLTSCRSV*AYAMGL Trigger: CAAGCCCATGGCATACGCCAACACGCTTCTGCAGCT...AGTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCTTGCCCCACCCTGAGGCTACCAGGAGGAGGCCTCCCTGATGACCCTAGGGCAGCCCGGAACTaGCCCAGTGCCATGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQPCPTLRLPGGGLPDDPRAARN*PSAMLL Trigger: CAGCAACATGGCACTGGGCAAGTTCCGGGCTGCCCT...AGGGTCATCAGGGAGGCCTCCTCCTGGTAGCCTCAGGGTGGGGCAAGGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
||
| CDS-3UTR CAA 90 bp | GGCGGGGCAGCAGGCCGAGGGCGGGGCCATTCAGCTGGGCAAGTCCCGGCTCACTCTGAGGGTAAACCGTaGAGCTCAAATATGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGRGRGHSAGQVPAHSEGKP*SSNMLR Trigger: CCTCAACATATTTGAGCTCAACGGTTTACCCTCAGA...GTGAGCCGGGACTTGCCCAGCTGAATGGCCCCGCCCTCGGCCTGCTGCCCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS GCA 90 bp | CACCACCGTCTCGTAGTCACGCAGGGCAGCCCGGAACTTGCCCAGTaGCATGTTGCTGGCCGCCCGGCGGTAGTAGCCTTTGATGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: HHRLVVTQGSPELAQ*HVAGRPAVVAFDVL Trigger: AAGTACATCAAAGGCTACTACCGCCGGGCGGCCAGCAACATGGCACTGGGCAAGTTCCGGGCTGCCCTGCGTGACTACGAGACGGTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS TCA 90 bp | ACTTGCCCAGTGCCATGTTGCTGGCCGCCCGGCGGTAGTAGCCTTTaGTGTACTTCTTGTCAAGCTCGATGGCCCGTGTGGCGTCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TCPVPCCWPPGGSSL*CTSCQARWPVWRRP Trigger: TGGGCGACGCCACACGGGCCATCGAGCTTGACAAGAAGTACATCAAAGGCTACTACCGCCGGGCGGCCAGCAACATGGCACTGGGCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS GCA 90 bp | CGCCCAGTGCATAGCCATAGCACTCAGTGCGCAGGTAGGCCAGGCTaGGGTTGCCATAGTAGATGGCATTGCCGGGGTTCAACTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RPVHSHSTQCAGRPG*GCHSRWHCRGSTRW Trigger: CCATCGAGTTGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATGGCTATGCACTGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS GCA 90 bp | GATGTACTTCTTGTCAAGCTCGATGGCCCGTGTGGCGTCGCCCAGTaGATAGCCATAGCACTCAGTGCGCAGGTAGGCCAGGCTGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DVLLVKLDGPCGVAQ*IAIALSAQVGQAAV Trigger: AACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATGGCTATGCACTGGGCGACGCCACACGGGCCATCGAGCTTGACAAGAAGTACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCCTCCAGGAAGGCCTaGGTGACATCAGGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSSSRKA*VTSGPN Trigger: GTTTGGGCCTGATGTCACCAAGGCCTTCCTGGAGGA...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCAGCTGCAGAAGCGTGTaGGCGTATGCCATGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QAVPYLQSPFSDQEPVVCSCRSV*AYAMGL Trigger: CAAGCCCATGGCATACGCCAACACGCTTCTGCAGCT...GCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
||
| CDS GCA 90 bp | GTGCATAGCCATAGCACTCAGTGCGCAGGTAGGCCAGGCTGCGGTTaGCATAGTAGATGGCATTGCCGGGGTTCAACTCGATGGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHSHSTQCAGRPGCG*HSRWHCRGSTRWPD Trigger: GTCAGGCCATCGAGTTGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATGGCTATGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTTCGTTGGCCTGTGTCTaGAGCTCCTCTGCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGSLACV*SSSARF Trigger: GAAGCGGGCAGAGGAGCTCAAGACACAGGCCAACGA...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTATCTGGGCTGTGTACTaGGCCTTCACCTCGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGIWAVY*AFTSPS Trigger: CGAGGGCGAGGTGAAGGCCAAGTACACAGCCCAGAT...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGAGGCACTGCTGTGAATaGGTGGAACTGGGGCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: GLPMAGSYCFTRGGAMQVRHCCE*VELGPQ Trigger: CTGCGGCCCCAGTTCCACCAATTCACAGCAGTGCCT...CACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | TTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCATCGTTGGCCTGTGTCTaGAGCTCCTCTGCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGSSYGRVLLLYQGRSHASLACV*SSSARF Trigger: GAAGCGGGCAGAGGAGCTCAAGACACAGGCCAACGA...TGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGATCAGCACTTTGCCATaGATACACTGCGCCAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSISTLP*IHCASG Trigger: TCCGCTGGCGCAGTGTATCAATGGCAAAGTGCTGAT...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGCCTTTGATGTACTTCTaGTCAAGCTCGATGGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: MPRLCPTSSLLSLTRSLSPLMYF*SSSMAR Trigger: ACGGGCCATCGAGCTTGACAAGAAGTACATCAAAGG...CGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 90 bp | CTGAATAGGCCTCCGTGCATGATCAGCACTTTGCCATTGATACACTaGGCCAGCGGAAGCCACTCGAACACCTCGCTGAAGAGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: LNRPPCMISTLPLIH*ASGSHSNTSLKSSY Trigger: GTATGAGCTCTTCAGCGAGGTGTTCGAGTGGCTTCCGCTGGCGCAGTGTATCAATGGCAAAGTGCTGATCATGCACGGAGGCCTATTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTCCTTTGATGTACTTCTaGTCAAGCTCGATGGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGPLMYF*SSSMAR Trigger: ACGGGCCATCGAGCTTGACAAGAAGTACATCAAAGG...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGCGTGCTCAGCTaGCAGAGGACTTCTTTCACC | + |
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Preference number: 5 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFTSVLS*QRTSFT Trigger: GGTGAAAGAAGTCCTCTGCAAGCTGAGCACGCTGGT...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS-3UTR CAA 90 bp | CAGGCTGTGCCCTACCTCCAGTCTCCTTTCTCTGACCAGGAGCCTGTCGTCTGCTCTGAGGGTAAACCGTaGAGCTCAAATATGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QAVPYLQSPFSDQEPVVCSEGKP*SSNMLR Trigger: CCTCAACATATTTGAGCTCAACGGTTTACCCTCAGA...GCAGACGACAGGCTCCTGGTCAGAGAAAGGAGACTGGAGGTAGGGCACAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTATCAGCACTTTGCCATaGATACACTGCGCCAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFISTLP*IHCASG Trigger: TCCGCTGGCGCAGTGTATCAATGGCAAAGTGCTGAT...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCTATGGCAGGGTCCTATTGCTTTACCAGGGGAGGAGCCATGCAGGTGATGATATAGTCCAGTaGATTCTCCTCCAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GSSYGRVLLLYQGRSHAGDDIVQ*ILLQEG Trigger: GCCTTCCTGGAGGAGAATCAACTGGACTATATCATC...ACCTGCATGGCTCCTCCCCTGGTAAAGCAATAGGACCCTGCCATAGGAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS-3UTR CAA 90 bp | GCCTCCCTGATGACCCTCTTTTGGGGTCTTCCTATGGCAGGGTCCTATTGCTTTGATGATATAGTCCAGTaGATTCTCCTCCAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ASLMTLFWGLPMAGSYCFDDIVQ*ILLQEG Trigger: GCCTTCCTGGAGGAGAATCAACTGGACTATATCATC...AAAGCAATAGGACCCTGCCATAGGAAGACCCCAAAAGAGGGTCATCAGGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CTCGTAGTCACGCAGGGCAGCCCGGAACTTGCCCAGTaGCATGTTGCTGGCCGCCCGGCGGTAGTAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVVTQGSPELAQ*HVAGRPAVVAF Trigger: AAAGGCTACTACCGCCGGGCGGCCAGCAACATGGCACTGGGCAAGTTCCGGGCTGCCCTGCGTGACTACGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CTTGTCAAGCTCGATGGCCCGTGTGGCGTCGCCCAGTaGATAGCCATAGCACTCAGTGCGCAGGTAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVKLDGPCGVAQ*IAIALSAQVGQ Trigger: CTGGCCTACCTGCGCACTGAGTGCTATGGCTATGCACTGGGCGACGCCACACGGGCCATCGAGCTTGACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS CAA 72 bp | CATGGGCTTGACATTGGGGTGAGGCACTGCTGTGAATaGGTGGAACTGGGGCCGCAGGTCGGAGCCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HGLDIGVRHCCE*VELGPQVGALE Trigger: CTCCAGGGCTCCGACCTGCGGCCCCAGTTCCACCAATTCACAGCAGTGCCTCACCCCAATGTCAAGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS TCA 72 bp | CATCAGGCCCAAACTGGCAACTCACACCACGCTTGCTaGCGGAGCGCCCATTCTGTGGCTGGGGATCTGACC | + |
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Preference number: 6 (lower is better) Translates to: HQAQTGNSHHAC*RSAHSVAGDLT Trigger: GGTCAGATCCCCAGCCACAGAATGGGCGCTCCGTCAGCAAGCGTGGTGTGAGTTGCCAGTTTGGGCCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS TCA 72 bp | GTGCCATGTTGCTGGCCGCCCGGCGGTAGTAGCCTTTaGTGTACTTCTTGTCAAGCTCGATGGCCCGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VPCCWPPGGSSL*CTSCQARWPVW Trigger: CCACACGGGCCATCGAGCTTGACAAGAAGTACATCAAAGGCTACTACCGCCGGGCGGCCAGCAACATGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | TTTGAAGTAGTCGTTGGCCTGTGTCTTGAGCTCCTCTaGCCGCTTCAGAGTGCCATCGGCCGGGGGTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: FEVVVGLCLELL*PLQSAIGRGFV Trigger: GACGAACCCCCGGCCGATGGCACTCTGAAGCGGGCAGAGGAGCTCAAGACACAGGCCAACGACTACTTCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS CCA 72 bp | TGCGCAGGTAGGCCAGGCTGCGGTTGCCATAGTAGATaGCATTGCCGGGGTTCAACTCGATGGCCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CAGRPGCGCHSR*HCRGSTRWPDC Trigger: ACAGTCAGGCCATCGAGTTGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS CAA 72 bp | GTGACATCAGGCCCAAACTGGCAACTCACACCACGCTaGCTGACGGAGCGCCCATTCTGTGGCTGGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: VTSGPNWQLTPR*LTERPFCGWGS Trigger: AGATCCCCAGCCACAGAATGGGCGCTCCGTCAGCAAGCGTGGTGTGAGTTGCCAGTTTGGGCCTGATGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CATAGCACTCAGTGCGCAGGTAGGCCAGGCTGCGGTTaGCATAGTAGATGGCATTGCCGGGGTTCAACTCGA | + |
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Preference number: 6 (lower is better) Translates to: HSTQCAGRPGCG*HSRWHCRGSTR Trigger: TCGAGTTGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CATAGCCATAGCACTCAGTGCGCAGGTAGGCCAGGCTaGGGTTGCCATAGTAGATGGCATTGCCGGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSHSTQCAGRPG*GCHSRWHCRGS Trigger: TGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATGGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS TCA 72 bp | TACACTGCGCCAGCGGAAGCCACTCGAACACCTCGCTaGAGAGCTCATACATCTGGGCTGTGTACTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: YTAPAEATRTPR*RAHTSGLCTWP Trigger: AGGCCAAGTACACAGCCCAGATGTATGAGCTCTTCAGCGAGGTGTTCGAGTGGCTTCCGCTGGCGCAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | GGTAGGCCAGGCTGCGGTTGCCATAGTAGATGGCATTaGCGGGGTTCAACTCGATGGCCTGACTGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: GRPGCGCHSRWH*RGSTRWPDCRT Trigger: AGTTCTACAGTCAGGCCATCGAGTTGAACCCCGGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CCTCCGTGCATGATCAGCACTTTGCCATTGATACACTaGGCCAGCGGAAGCCACTCGAACACCTCGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPCMISTLPLIH*ASGSHSNTSLK Trigger: CTTCAGCGAGGTGTTCGAGTGGCTTCCGCTGGCGCAGTGTATCAATGGCAAAGTGCTGATCATGCACGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | CACAGCAGGTCACACATGGGACCTGAGTCTGGGGGCTaGCGATTCCGCTCAATCTTTCGGATGTCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSRSHMGPESGG*RFRSIFRMSSR Trigger: TCTGGATGACATCCGAAAGATTGAGCGGAATCGGCAGCCCCCAGACTCAGGTCCCATGTGTGACCTGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS CAA 72 bp | TCTTCGCTGAATAGGCCTCCGTGCATGATCAGCACTTaGCCATTGATACACTGCGCCAGCGGAAGCCACTCG | + |
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Preference number: 6 (lower is better) Translates to: SSLNRPPCMIST*PLIHCASGSHS Trigger: CGAGTGGCTTCCGCTGGCGCAGTGTATCAATGGCAAAGTGCTGATCATGCACGGAGGCCTATTCAGCGAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS CAA 72 bp | GTCTCTTTCAGCGTCGTCTCCACCAGCGTGCTCAGCTaGCAGAGGACTTCTTTCACCTGTACTAGGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSFSVVSTSVLS*QRTSFTCTRIW Trigger: CCAGATCCTAGTACAGGTGAAAGAAGTCCTCTGCAAGCTGAGCACGCTGGTGGAGACGACGCTGAAAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS CAA 90 bp | GTAGCCCTCGGCTTTGACTTCATGGCTGCGGATGATATAGTCCAGTaGATTCTCCTCCAGGAAGGCCTTGGTGACATCAGGCCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: VALGFDFMAADDIVQ*ILLQEGLGDIRPKL Trigger: CAGTTTGGGCCTGATGTCACCAAGGCCTTCCTGGAGGAGAATCAACTGGACTATATCATCCGCAGCCATGAAGTCAAAGCCGAGGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS TCA 72 bp | TATAGTCCAGTTGATTCTCCTCCAGGAAGGCCTTGGTaGCATCAGGCCCAAACTGGCAACTCACACCACGCT | + |
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Preference number: 6 (lower is better) Translates to: YSPVDSPPGRPW*HQAQTGNSHHA Trigger: AGCGTGGTGTGAGTTGCCAGTTTGGGCCTGATGTCACCAAGGCCTTCCTGGAGGAGAATCAACTGGACTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | TCTCTTTCAGCGTCGTCTCCACCAGCGTGCTCAGCTTaGAGAGGACTTCTTTCACCTGTACTAGGATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLSASSPPACSA*RGLLSPVLGSG Trigger: ACCAGATCCTAGTACAGGTGAAAGAAGTCCTCTGCAAGCTGAGCACGCTGGTGGAGACGACGCTGAAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS GCA 72 bp | TCCAGAGTGACACCATCTTCGCTGAATAGGCCTCCGTaGATGATCAGCACTTTGCCATTGATACACTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SRVTPSSLNRPP*MISTLPLIHCA Trigger: GGCGCAGTGTATCAATGGCAAAGTGCTGATCATGCACGGAGGCCTATTCAGCGAAGATGGTGTCACTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | TCTTCTCTGTCTCTTTCAGCGTCGTCTCCACCAGCGTaGTCAGCTTGCAGAGGACTTCTTTCACCTGTACTA | + |
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Preference number: 6 (lower is better) Translates to: SSLSLSASSPPA*SACRGLLSPVL Trigger: TAGTACAGGTGAAAGAAGTCCTCTGCAAGCTGAGCACGCTGGTGGAGACGACGCTGAAAGAGACAGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003183.12 |
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| CDS TCA 72 bp | TTGTCTGTCTCGTGGTTGCCTCGAAGTAGATGGAAATaGTCTGGATACAGGAGCTTAAAGCCGAAGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSVSWLPRSRWK*SGYRSLKPKRV Trigger: CACCCTCTTCGGCTTTAAGCTCCTGTATCCAGATCATTTCCATCTACTTCGAGGCAACCACGAGACAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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| CDS GCA 72 bp | ACCCGTAGATCTGGTTCATGTTGTCTGTCTCGTGGTTaGCTCGAAGTAGATGGAAATGATCTGGATACAGGA | + |
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Preference number: 6 (lower is better) Translates to: TRRSGSCCLSRG*LEVDGNDLDTG Trigger: TCCTGTATCCAGATCATTTCCATCTACTTCGAGGCAACCACGAGACAGACAACATGAACCAGATCTACGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003183.12 ENSMUST00000142597.2 |
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