Pregenerated sensors for PPP4R4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021209Ensembl transcript IDs: ENSMUST00000021631.12, ENSMUST00000187155.7, ENSMUST00000189871.7, ENSMUST00000190151.2, ENSMUST00000190664.2
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTGTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTaGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGA | + |
Preference number: 1 (lower is better) Translates to: LCIFTSTTLWIGCVT*PTGSAGHDRVRRKG Trigger: TCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR CCA 90 bp | AAAGTTTTCCTGAATCTTTGTGGATTTTCATTGCTGAATCTAGACTaGGGCCGTCCAGGTGCTGATACCATCACAGAATCCAGGACCCAC | + |
Preference number: 1 (lower is better) Translates to: KVFLNLCGFSLLNLD*GRPGADTITESRTH Trigger: GTGGGTCCTGGATTCTGTGATGGTATCAGCACCTGGACGGCCCCAGTCTAGATTCAGCAATGAAAATCCACAAAGATTCAGGAAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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3UTR GCA 90 bp | AAGTGGTTACCAGAAGTCAATTTAGACAAGCAGGCTAAGTTAGACTaGCATGGGATGTCTAAATGCTACAACTTAGTAAACAAAAGCCAG | + |
Preference number: 1 (lower is better) Translates to: KWLPEVNLDKQAKLD*HGMSKCYNLVNKSQ Trigger: CTGGCTTTTGTTTACTAAGTTGTAGCATTTAGACATCCCATGGCAGTCTAACTTAGCCTGCTTGTCTAAATTGACTTCTGGTAACCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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3UTR-3UTR GCA 90 bp | CTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAAGCTGGAACACTaGTGGCATTTCGAGTTCGGA | + |
Preference number: 2 (lower is better) Translates to: LWIGCVTWPTGSAGHDRVRKLEH*WHFEFG Trigger: TCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCT...AACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR-3UTR GCA 90 bp | CCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGCACACTTGTCTAAGGTaGCATATTTTGCATGAAAAG | + |
Preference number: 2 (lower is better) Translates to: PLLFGSAVLPGPREVLGMHTCLR*HILHEK Trigger: CTTTTCATGCAAAATATGGCACCTTAGACAAGTGTG...CATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR-3UTR CCA 90 bp | ATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTAGGAGAAAAGGAAGCTaGAACACTGCTGGCATTTCG | + |
Preference number: 2 (lower is better) Translates to: IFTSTTLWIGCVTWPTGSRRKGS*NTAGIS Trigger: CGAAATGCCAGCAGTGTTCCAGCTTCCTTTTCTCCT...ACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR CCA 72 bp | TTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTaGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGG | + |
Preference number: 3 (lower is better) Translates to: FTSTTLWIGCVT*PTGSAGHDRVR Trigger: CCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR-3UTR CAA 90 bp | CATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGCTTTTACTAGCACACTaGTCTAAGGTGCCATATTTT | + |
Preference number: 3 (lower is better) Translates to: HLYFHYSLDRLCYLAHGKLLLAH*SKVPYF Trigger: AAAATATGGCACCTTAGACAAGTGTGCTAGTAAAAG...CTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR GCA 72 bp | AAGCAGGCTAAGTTAGACTGCCATGGGATGTCTAAATaGTACAACTTAGTAAACAAAAGCCAGCCTCTCACA | + |
Preference number: 3 (lower is better) Translates to: KQAKLDCHGMSK*YNLVNKSQPLT Trigger: TGTGAGAGGCTGGCTTTTGTTTACTAAGTTGTAGCATTTAGACATCCCATGGCAGTCTAACTTAGCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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3UTR-3UTR CAA 90 bp | AAGGAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGATTTCTTGATTTCTTaGCCCTTTGACCTTCAGAAT | + |
Preference number: 3 (lower is better) Translates to: KEAGTLLAFRVRNESSVSDFLIS*PFDLQN Trigger: ATTCTGAAGGTCAAAGGGCAAAGAAATCAAGAAATC...ACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR-3UTR CAA 90 bp | AAGGAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTTGGCTTCGAGTCAATTaGGATTTCTTGATTTCTTTG | + |
Preference number: 3 (lower is better) Translates to: KEAGTLLAFRVRNESSVSWLRVN*DFLISL Trigger: CAAAGAAATCAAGAAATCCAAATTGACTCGAAGCCA...ACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR GCA 72 bp | CCAGAAGTCAATTTAGACAAGCAGGCTAAGTTAGACTaGCATGGGATGTCTAAATGCTACAACTTAGTAAAC | + |
Preference number: 3 (lower is better) Translates to: PEVNLDKQAKLD*HGMSKCYNLVN Trigger: GTTTACTAAGTTGTAGCATTTAGACATCCCATGGCAGTCTAACTTAGCCTGCTTGTCTAAATTGACTTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | GTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCAGAGAAGAGGGAACCTaGGTTCTGGGAAGCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: VTWPTGSAGHDRVRRKGSREEGT*VLGSRG Trigger: CCCTCTGCTTCCCAGAACTCAGGTTCCCTCTTCTCT...GCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | ACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACACACCTGTGTCCCTGTaGTCCAGGTGCAGGAGAATG | + |
Preference number: 4 (lower is better) Translates to: TTLWIGCVTWPTGSAGHDTPVSL*SRCRRM Trigger: CATTCTCCTGCACCTGGAGCACAGGGACACAGGTGT...GTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | GTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCTGAGGAGGCTGCAGCTCGCTaGTCAGCAGCTGTGAGTGCT | + |
Preference number: 4 (lower is better) Translates to: VRNESSVSDSMAVLTSPEEAAAR*SAAVSA Trigger: AGCACTCACAGCTGCTGAGCAGCGAGCTGCAGCCTC...CTCAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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3UTR CAA 72 bp | CCTTCCGGGGCTGTGCATCTTTACTTCCACTACTCTTaGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGC | + |
Preference number: 4 (lower is better) Translates to: PSGAVHLYFHYS*DRLCYLAHGKC Trigger: GCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCCAGCCATGCATTGCTaGCACCTGTGTCCCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCPAMHC*HLCPCA Trigger: AGCACAGGGACACAGGTGTCAGCAATGCATGGCTGG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | TGTCTCTTCAGTCCAGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCAGAGGCTGCAGCTCGCTaGTCAGCAGCTGTGAGTGCT | + |
Preference number: 4 (lower is better) Translates to: CLFSPAGSTHQVGAHYTAEAAAR*SAAVSA Trigger: AGCACTCACAGCTGCTGAGCAGCGAGCTGCAGCCTC...TGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCTGGACTGAAGAGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCGAGGCTGCAGCTCGCTaGTCAGCAGCTGTGAGTGCT | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGEAAAR*SAAVSA Trigger: AGCACTCACAGCTGCTGAGCAGCGAGCTGCAGCCTC...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | GCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGTCCAGGAACAGAAATaGGCAAGTTCTTGGACAGGC | + |
Preference number: 4 (lower is better) Translates to: AVLPGPREVLGMTGLGEKVQEQK*ASSWTG Trigger: GCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGGAC...CTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCAGCCATGCATTGCTaGCACCTGTGTCCCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSPAMHC*HLCPCA Trigger: AGCACAGGGACACAGGTGTCAGCAATGCATGGCTGG...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | GAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCTGAGACGGAAGACTCCACGCTTGCGACATaGAGGACTTCTCTGACTTTG | + |
Preference number: 4 (lower is better) Translates to: ESSVSDSMAVLTSPETEDSTLAT*RTSLTL Trigger: CAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGA...GTCTTCCGTCTCAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | CAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATTACACCTGTGTCCCTGTaGTCCAGGTGCAGGAGAATG | + |
Preference number: 4 (lower is better) Translates to: QAVHTKLELITLHWSTRITPVSL*SRCRRM Trigger: CATTCTCCTGCACCTGGAGCACAGGGACACAGGTGT...AATCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCTCAGCAGCTGTGAGTaGTGGAATCAAGTCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLLSSCE*WNQVWH Trigger: GTGCCAGACTTGATTCCAGCACTCACAGCTGCTGAG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | TACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGAGCTGCTGGAGGAGATaGATGTCTGCAGGAATCTTC | + |
Preference number: 4 (lower is better) Translates to: YFHYSLDRLCYLAHGKCWSCWRR*MSAGIF Trigger: GAAGATTCCTGCAGACATGCATCTCCTCCAGCAGCT...CCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGGCGCAGACTTCACCTTaGGCAGCAGGTAGCAAAGTT | + |
Preference number: 4 (lower is better) Translates to: VHLYFHYSLDRLCYLAHGAQTSP*AAGSKV Trigger: AACTTTGCTACCTGCTGCCCAAGGTGAAGTCTGCGC...CCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCCAGTTAGTGACAGCATaGCAGTCCTCACCAGCCCTG | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSQLVTA*QSSPAL Trigger: CAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTG...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCAGTTAGTGACAGCATaGCAGTCCTCACCAGCCCTG | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCQLVTA*QSSPAL Trigger: CAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCCCAGCCATGCATTGCTaGCACCTGTGTCCCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: HTLTILAVCRCSFSTIRFPAMHC*HLCPCA Trigger: AGCACAGGGACACAGGTGTCAGCAATGCATGGCTGG...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATCTGCCCCAATGCCCTaGGCTATGTTTTCTAACTGG | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGSAPMP*AMFSNW Trigger: CCAGTTAGAAAACATAGCTCAGGGCATTGGGGCAGA...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | CTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGTGCTGATCTGGAGTaGAAATTCCATAGAGTCCAT | + |
Preference number: 4 (lower is better) Translates to: LWIGCVTWPTGSAGHDRVSADLE*KFHRVH Trigger: ATGGACTCTATGGAATTTTCACTCCAGATCAGCACT...AACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCCACGCTTGCGACATaGAGGACTTCTCTGACTTTG | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLSTLAT*RTSLTL Trigger: CAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGA...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCCTGCATCTCCACGCTTaGGACATGCAGGACTTCTCT | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSLHLHA*DMQDFS Trigger: AGAGAAGTCCTGCATGTCGCAAGCGTGGAGATGCAG...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCACACCTGTGTCCCTGTaGTCCAGGTGCAGGAGAATG | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGTPVSL*SRCRRM Trigger: CATTCTCCTGCACCTGGAGCACAGGGACACAGGTGT...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | CAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATTCTCAGCAGCTGTGAGTaGTGGAATCAAGTCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: QAVHTKLELITLHWSTRILSSCE*WNQVWH Trigger: GTGCCAGACTTGATTCCAGCACTCACAGCTGCTGAG...AATCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | GCTGTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACCTCAGCAGCTGTGAGTaGTGGAATCAAGTCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: AVHLYFHYSLDRLCYLAHLSSCE*WNQVWH Trigger: GTGCCAGACTTGATTCCAGCACTCACAGCTGCTGAG...GTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAAGCCTTCCGGGGCTGTaGATCTTTACTTCCACTACT | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGSLPGL*IFTSTT Trigger: AGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGGCT...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGAGCCTTCCGGGGCTGTaGATCTTTACTTCCACTACT | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLSLPGL*IFTSTT Trigger: AGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGGCT...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | GCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGCTCTCAGGAATTTCATaGAGAGAGAAGAGGGAACCT | + |
Preference number: 4 (lower is better) Translates to: AVLPGPREVLGMTGLGEKLSGIS*REKREP Trigger: AGGTTCCCTCTTCTCTCTGCATGAAATTCCTGAGAG...CTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTCGCGACTGGACGGTTTaGGAAAGCTGTGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFRDWTV*ESCALE Trigger: TTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCG...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGCGACTGGACGGTTTaGGAAAGCTGTGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGRDWTV*ESCALE Trigger: TTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCG...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | GCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGTCCTGCTCTACGATTTaGGATGGAATCTGGCTTTCA | + |
Preference number: 4 (lower is better) Translates to: AVLPGPREVLGMTGLGEKSCSTI*DGIWLS Trigger: TGAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGA...CTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | ACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCCCTGTCAATATCACTaGGATCTTCATCAACAGTCA | + |
Preference number: 4 (lower is better) Translates to: TSTTLWIGCVTWPTGSAGPCQYH*DLHQQS Trigger: TGACTGTTGATGAAGATCTCAGTGATATTGACAGGG...CCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | TTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCTGGTTTGGGAAAGCTGTaGCTTGGAAACAAGTGGATT | + |
Preference number: 4 (lower is better) Translates to: LPGPREVLGMTGLGEKEAGLGKL*LGNKWI Trigger: AATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACC...AGCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | CTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTCTGTCGCATCAAAAATaGAAGGTTTGCAATCACACT | + |
Preference number: 4 (lower is better) Translates to: LWIGCVTWPTGSAGHDRVLSHQK*KVCNHT Trigger: AGTGTGATTGCAAACCTTCCATTTTTGATGCGACAG...AACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GATTCTCCGCTGACTGCTTGTCTCCTTCACCAAGCAGTTGACTTAAGGATTGGACGCGACTGGACGGTTTaGGAAAGCTGTGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: DSPLTACLLHQAVDLRIGRDWTV*ESCALE Trigger: TTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCG...TCCAATCCTTAAGTCAACTGCTTGGTGAAGGAGACAAGCAGTCAGCGGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGACTAACTAAACGCGACTaGACGGTTTGGGAAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGLTKRD*TVWESC Trigger: ACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGTTAG...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCTAACTAAACGCGACTaGACGGTTTGGGAAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLLTKRD*TVWESC Trigger: ACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGTTAG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | GAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCTGAGACGGAAGACAATAGTGTGTCTGACTaGCACTTCAGGGTCATGACA | + |
Preference number: 4 (lower is better) Translates to: ESSVSDSMAVLTSPETEDNSVSD*HFRVMT Trigger: TGTCATGACCCTGAAGTGCCAGTCAGACACACTATT...GTCTTCCGTCTCAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | ACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACTTTGCCACTGGGTCATaGGTTAGTTCAATAACAGGT | + |
Preference number: 4 (lower is better) Translates to: TTLWIGCVTWPTGSAGHDFATGS*VSSITG Trigger: ACCTGTTATTGAACTAACCCATGACCCAGTGGCAAA...GTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACGCGCAGACTTCACCTTaGGCAGCAGGTAGCAAAGTT | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNAQTSP*AAGSKV Trigger: AACTTTGCTACCTGCTGCCCAAGGTGAAGTCTGCGC...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGACACATTTCTAGCTGCTaGAGGAGATGCATGTCTGCA | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGHISSC*RRCMSA Trigger: TGCAGACATGCATCTCCTCCAGCAGCTAGAAATGTG...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | TACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGACATTGATTCTTCCTaGAGGATGGTCAAAAAGGAC | + |
Preference number: 4 (lower is better) Translates to: YFHYSLDRLCYLAHGKCWDIDSS*RMVKKD Trigger: GTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTC...CCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | ATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTTCTGCCCCAATGCCCTaGGCTATGTTTTCTAACTGG | + |
Preference number: 4 (lower is better) Translates to: IFTSTTLWIGCVTWPTGSSAPMP*AMFSNW Trigger: CCAGTTAGAAAACATAGCTCAGGGCATTGGGGCAGA...ACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | GCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGAAGGGAAGTATAGTTTaGCTTCTGTCATCTGTATCG | + |
Preference number: 4 (lower is better) Translates to: AVLPGPREVLGMTGLGEKKGSIV*LLSSVS Trigger: CGATACAGATGACAGAAGTCAAACTATACTTCCCTT...CTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAGGATTGAGAATCTCATaGCTCAGGGTTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGGLRIS*LRVSFG Trigger: GCCAAAAGAAACCCTGAGGCATGAGATTCTCAATCC...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAATTCTTTGTCAGTTCTaGCCCAATGCCCTGAGCTAT | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGILCQF*PNALSY Trigger: ATAGCTCAGGGCATTGGGGCAGAACTGACAAAGAAT...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | ACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACTGGCCATTTTCTTGTTaGAAACCCAGTGTACAAAGT | + |
Preference number: 4 (lower is better) Translates to: TTLWIGCVTWPTGSAGHDWPFSC*KPSVQS Trigger: ACTTTGTACACTGGGTTTGCAACAAGAAAATGGCCA...GTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | ACCACAGACAGCTGCTCTGAGCAGAGAGCTCATAGGAAATACAGTGCCTTCCTTAGCTGCTGGAGGAGATaGATGTCTGCAGGAATCTTC | + |
Preference number: 4 (lower is better) Translates to: TTDSCSEQRAHRKYSAFLSCWRR*MSAGIF Trigger: GAAGATTCCTGCAGACATGCATCTCCTCCAGCAGCT...AAGGAAGGCACTGTATTTCCTATGAGCTCTCTGCTCAGAGCAGCTGTCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCAGCTGCTGGAGGAGATaGATGTCTGCAGGAATCTTC | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGSCWRR*MSAGIF Trigger: GAAGATTCCTGCAGACATGCATCTCCTCCAGCAGCT...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | GTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCGCTATGTTTTCTAACTaGCGACACATACAAGATCGA | + |
Preference number: 4 (lower is better) Translates to: VTWPTGSAGHDRVRRKGSAMFSN*RHIQDR Trigger: TCGATCTTGTATGTGTCGCCAGTTAGAAAACATAGC...GCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | TTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCTCTCTACGATTTGGGATaGAATCTGGCTTTCATTGTG | + |
Preference number: 4 (lower is better) Translates to: LPGPREVLGMTGLGEKEALYDLG*NLAFIV Trigger: CACAATGAAAGCCAGATTCCATCCCAAATCGTAGAG...AGCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACGTCCAGGAACAGAAATaGGCAAGTTCTTGGACAGGC | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNVQEQK*ASSWTG Trigger: GCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGGAC...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCGTCCAGGAACAGAAATaGGCAAGTTCTTGGACAGGC | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGVQEQK*ASSWTG Trigger: GCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGGAC...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCAGGAGAAAAGGAAGCTaGAACACTGCTGGCATTTCG | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSRRKGS*NTAGIS Trigger: CGAAATGCCAGCAGTGTTCCAGCTTCCTTTTCTCCT...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCCCTGTCAATATCACTaGGATCTTCATCAACAGTCA | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLPCQYH*DLHQQS Trigger: TGACTGTTGATGAAGATCTCAGTGATATTGACAGGG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCACATCTTGACAGAGTaGTTTTACCAGGGGAAGTAT | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLHILTE*FYQGKY Trigger: ATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCTCTGCCCCAATGCCCTaGGCTATGTTTTCTAACTGG | + |
Preference number: 4 (lower is better) Translates to: TLTILAVCRCSFSTIRFSSAPMP*AMFSNW Trigger: CCAGTTAGAAAACATAGCTCAGGGCATTGGGGCAGA...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | ACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGACAGTTCTTTCGTACTaGAGTATATTTCTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: TSTTLWIGCVTWPTGSAGTVLSY*SIFLLL Trigger: CAGGAGAAGAAATATACTTCAGTACGAAAGAACTGT...CCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | TGTCTCTTCAGTCCAGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCAGGCACTTCAGGGTCATaGCAAAGGCAGAAGAATGTA | + |
Preference number: 4 (lower is better) Translates to: CLFSPAGSTHQVGAHYTAGTSGS*QRQKNV Trigger: TACATTCTTCTGCCTTTGTCATGACCCTGAAGTGCC...TGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCTGGACTGAAGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCGGCACTTCAGGGTCATaGCAAAGGCAGAAGAATGTA | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSGTSGS*QRQKNV Trigger: TACATTCTTCTGCCTTTGTCATGACCCTGAAGTGCC...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCTCACTCGATATGATATaGGGCAGACAGGTGTACTTC | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSSLDMI*GRQVYF Trigger: GAAGTACACCTGTCTGCCTCATATCATATCGAGTGA...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | GCTGTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACTCACTCGATATGATATaGGGCAGACAGGTGTACTTC | + |
Preference number: 4 (lower is better) Translates to: AVHLYFHYSLDRLCYLAHSLDMI*GRQVYF Trigger: GAAGTACACCTGTCTGCCTCATATCATATCGAGTGA...GTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACGATTTCTTTGCTTGTTaGTGCAGTGCTAGAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNDFFAC*CSARGG Trigger: CCCTCCTCTAGCACTGCATCAACAAGCAAAGAAATC...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCGGTTTGGGAAAGCTGTaGCTTGGAAACAAGTGGATT | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSGLGKL*LGNKWI Trigger: AATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACC...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTGGTTTGGGAAAGCTGTaGCTTGGAAACAAGTGGATT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCGLGKL*LGNKWI Trigger: AATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACC...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTATTCTTTGTCAGTTCTaGCCCAATGCCCTGAGCTAT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCILCQF*PNALSY Trigger: ATAGCTCAGGGCATTGGGGCAGAACTGACAAAGAAT...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACACACATTTCTAGCTaGTGGAGGAGATGCATGTCT | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSTHISS*WRRCMS Trigger: AGACATGCATCTCCTCCAGCAGCTAGAAATGTGTGT...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAATGTCCTGGAGTCTCTaGGTTTCTTCTCAAAGCTTT | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGMSWSL*VSSQSF Trigger: AAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACAT...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | ATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTCTAACTAAACGCGACTaGACGGTTTGGGAAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: IFTSTTLWIGCVTWPTGSLTKRD*TVWESC Trigger: ACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGTTAG...ACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACCACATTTCTAGCTGCTaGAGGAGATGCATGTCTGCA | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNHISSC*RRCMSA Trigger: TGCAGACATGCATCTCCTCCAGCAGCTAGAAATGTG...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | ATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTCACATTTCTAGCTGCTaGAGGAGATGCATGTCTGCA | + |
Preference number: 4 (lower is better) Translates to: IFTSTTLWIGCVTWPTGSHISSC*RRCMSA Trigger: TGCAGACATGCATCTCCTCCAGCAGCTAGAAATGTG...ACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTAGGAGAAAAGGAAGCTaGAACACTGCTGGCATTTCG | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFRRKGS*NTAGIS Trigger: CGAAATGCCAGCAGTGTTCCAGCTTCCTTTTCTCCT...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | CAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATTGACATTGATTCTTCCTaGAGGATGGTCAAAAAGGAC | + |
Preference number: 4 (lower is better) Translates to: QAVHTKLELITLHWSTRIDIDSS*RMVKKD Trigger: GTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTC...AATCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGAAGGGAAGTATAGTTTaGCTTCTGTCATCTGTATCG | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLKGSIV*LLSSVS Trigger: CGATACAGATGACAGAAGTCAAACTATACTTCCCTT...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGTGCTGATCTGGAGTaGAAATTCCATAGAGTCCAT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCSADLE*KFHRVH Trigger: ATGGACTCTATGGAATTTTCACTCCAGATCAGCACT...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCGGCACTTCAGGGTCATaGCAAAGGCAGAAGAATGTA | + |
Preference number: 4 (lower is better) Translates to: TLTILAVCRCSFSTIRFSGTSGS*QRQKNV Trigger: TACATTCTTCTGCCTTTGTCATGACCCTGAAGTGCC...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCGATTTCTTTGCTTGTTaGTGCAGTGCTAGAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: HTLTILAVCRCSFSTIRFDFFAC*CSARGG Trigger: CCCTCCTCTAGCACTGCATCAACAAGCAAAGAAATC...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | GATTCTCCGCTGACTGCTTGTCTCCTTCACCAAGCAGTTGACTTAAGGATTGGAGGATTTTTCTCTTGTTaGTGCAGTGCTAGAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: DSPLTACLLHQAVDLRIGGFFSC*CSARGG Trigger: CCCTCCTCTAGCACTGCATCAACAAGAGAAAAATCC...TCCAATCCTTAAGTCAACTGCTTGGTGAAGGAGACAAGCAGTCAGCGGAGAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | CAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATTCAAAAATGGAAGGTTTaGAATCACACTGGCTCCTTG | + |
Preference number: 4 (lower is better) Translates to: QAVHTKLELITLHWSTRIQKWKV*NHTGSL Trigger: CAAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTG...AATCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | CATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGCAAAAATGGAAGGTTTaGAATCACACTGGCTCCTTG | + |
Preference number: 4 (lower is better) Translates to: HLYFHYSLDRLCYLAHGKQKWKV*NHTGSL Trigger: CAAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTG...CTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCGGATTGAGAATCTCATaGCTCAGGGTTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSGLRIS*LRVSFG Trigger: GCCAAAAGAAACCCTGAGGCATGAGATTCTCAATCC...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
||
CDS-3UTR GCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCATTCTTTGTCAGTTCTaGCCCAATGCCCTGAGCTAT | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSILCQF*PNALSY Trigger: ATAGCTCAGGGCATTGGGGCAGAACTGACAAAGAAT...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
||
CDS-3UTR GCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACACACACATTTCTAGCTaGTGGAGGAGATGCATGTCT | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNTHISS*WRRCMS Trigger: AGACATGCATCTCCTCCAGCAGCTAGAAATGTGTGT...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTAGGAAGCTGGAACACTaGTGGCATTTCGAGTTCGGA | + |
Preference number: 4 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPRKLEH*WHFEFG Trigger: TCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCT...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
||
CDS-3UTR CCA 90 bp | CAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGATTTGCCTTGGAAACAAGTaGATTGAGAATCTCATGCCT | + |
Preference number: 4 (lower is better) Translates to: QAVHTKLELITLHWSTRICLGNK*IENLMP Trigger: AGGCATGAGATTCTCAATCCACTTGTTTCCAAGGCA...AATCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
||
CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCTGCTCTACGATTTaGGATGGAATCTGGCTTTCA | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFSCSTI*DGIWLS Trigger: TGAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGA...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
||
CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTAATAGTGTGTCTGACTaGCACTTCAGGGTCATGACA | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFNSVSD*HFRVMT Trigger: TGTCATGACCCTGAAGTGCCAGTCAGACACACTATT...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
||
CDS-3UTR CCA 90 bp | ACCACAGACAGCTGCTCTGAGCAGAGAGCTCATAGGAAATACAGTGCCTTCCTTCGTGCAGCTGCCCTTTaGACAGGTAAGACATTATTT | + |
Preference number: 4 (lower is better) Translates to: TTDSCSEQRAHRKYSAFLRAAAL*TGKTLF Trigger: AAATAATGTCTTACCTGTCCAAAGGGCAGCTGCACG...AAGGAAGGCACTGTATTTCCTATGAGCTCTCTGCTCAGAGCAGCTGTCTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
||
CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTCGTGCAGCTGCCCTTTaGACAGGTAAGACATTATTT | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFRAAAL*TGKTLF Trigger: AAATAATGTCTTACCTGTCCAAAGGGCAGCTGCACG...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
||
CDS-3UTR CCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTTTTGCCACTGGGTCATaGGTTAGTTCAATAACAGGT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCFATGS*VSSITG Trigger: ACCTGTTATTGAACTAACCCATGACCCAGTGGCAAA...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCGACATTGATTCTTCCTaGAGGATGGTCAAAAAGGAC | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGDIDSS*RMVKKD Trigger: GTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTC...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
||
CDS-3UTR TCA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAAAAAATCTCAAGTGCTaGTCTGGAGTGAAAATTCCA | + |
Preference number: 4 (lower is better) Translates to: SRQYTPSWSSLHCTGALGKNLKC*SGVKIP Trigger: TGGAATTTTCACTCCAGATCAGCACTTGAGATTTTT...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | GTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCTGAGCAATTAGTTTTTGAATaGCTTCATGCCTCTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: VRNESSVSDSMAVLTSPEQLVFE*LHASAL Trigger: AAGAGCAGAGGCATGAAGTCATTCAAAAACTAATTG...CTCAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCTGGCCATTTTCTTGTTaGAAACCCAGTGTACAAAGT | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSWPFSC*KPSVQS Trigger: ACTTTGTACACTGGGTTTGCAACAAGAAAATGGCCA...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | TTTAAGGTAGCCTTCCGGGGCTGTGCATCTTTACTTCCACTACTCTTTGGATCGACACACATTTCTAGCTaGTGGAGGAGATGCATGTCT | + |
Preference number: 4 (lower is better) Translates to: FKVAFRGCASLLPLLFGSTHISS*WRRCMS Trigger: AGACATGCATCTCCTCCAGCAGCTAGAAATGTGTGT...CGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGGCTACCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
||
CDS-3UTR GCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCATGTCCTGGAGTCTCTaGGTTTCTTCTCAAAGCTTT | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGMSWSL*VSSQSF Trigger: AAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACAT...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCATGTCCTGGAGTCTCTaGGTTTCTTCTCAAAGCTTT | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSMSWSL*VSSQSF Trigger: AAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACAT...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCACACTTGTCTAAGGTaGCATATTTTGCATGAAAAG | + |
Preference number: 4 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLHTCLR*HILHEK Trigger: CTTTTCATGCAAAATATGGCACCTTAGACAAGTGTG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | AAGGAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGGTTTGCAATCACACTaGCTCCTTGGACATCTTGAC | + |
Preference number: 4 (lower is better) Translates to: KEAGTLLAFRVRNESSVSGLQSH*LLGHLD Trigger: GTCAAGATGTCCAAGGAGCCAGTGTGATTGCAAACC...ACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCTGTCGCATCAAAAATaGAAGGTTTGCAATCACACT | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCLSHQK*KVCNHT Trigger: AGTGTGATTGCAAACCTTCCATTTTTGATGCGACAG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTCTCTACGATTTGGGATaGAATCTGGCTTTCATTGTG | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFLYDLG*NLAFIV Trigger: CACAATGAAAGCCAGATTCCATCCCAAATCGTAGAG...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCTAAGTTCCAAGATTTCTaGAAGGTGATTTATAAGAGC | + |
Preference number: 4 (lower is better) Translates to: LPGPREVLGMTGLGEKEAKFQDF*KVIYKS Trigger: GCTCTTATAAATCACCTTCCAGAAATCTTGGAACTT...AGCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | GAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGACCGTGCAGCTGCCCTTTaGACAGGTAAGACATTATTT | + |
Preference number: 4 (lower is better) Translates to: EAGTLLAFRVRNESSVSDRAAAL*TGKTLF Trigger: AAATAATGTCTTACCTGTCCAAAGGGCAGCTGCACG...GTCACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTTTGCCACTGGGTCATaGGTTAGTTCAATAACAGGT | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFFATGS*VSSITG Trigger: ACCTGTTATTGAACTAACCCATGACCCAGTGGCAAA...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | GAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGACCACATCTTGACAGAGTaGTTTTACCAGGGGAAGTAT | + |
Preference number: 4 (lower is better) Translates to: EAGTLLAFRVRNESSVSDHILTE*FYQGKY Trigger: ATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTG...GTCACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAAAAATCTCAAGTGCTaGTCTGGAGTGAAAATTCCA | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCKNLKC*SGVKIP Trigger: TGGAATTTTCACTCCAGATCAGCACTTGAGATTTTT...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCCAATTAGTTTTTGAATaGCTTCATGCCTCTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: LPPFHTLTILAVCRCSFSQLVFE*LHASAL Trigger: AAGAGCAGAGGCATGAAGTCATTCAAAAACTAATTG...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGATTGAGAATCTCATaGCTCAGGGTTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPGLRIS*LRVSFG Trigger: GCCAAAAGAAACCCTGAGGCATGAGATTCTCAATCC...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | GCTGTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACTATATCGTAGAAAAATaGATAGAGTTCGTGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: AVHLYFHYSLDRLCYLAHYIVEK*IEFVQL Trigger: CAGCTGCACGAACTCTATGCATTTTTCTACGATATA...GTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCACACTTGTCTAAGGTaGCATATTTTGCATGAAAAG | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCHTCLR*HILHEK Trigger: CTTTTCATGCAAAATATGGCACCTTAGACAAGTGTG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTGCTATGTTTTCTAACTaGCGACACATACAAGATCGA | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFAMFSN*RHIQDR Trigger: TCGATCTTGTATGTGTCGCCAGTTAGAAAACATAGC...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTATTTGGGATGGAATCTaGCTTTCATTGTGGCCATTT | + |
Preference number: 4 (lower is better) Translates to: FLPPFHTLTILAVCRCSFIWDGI*LSLWPF Trigger: AAATGGCCACAATGAAAGCCAGATTCCATCCCAAAT...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCATTTGGGATGGAATCTaGCTTTCATTGTGGCCATTT | + |
Preference number: 4 (lower is better) Translates to: FRVRNESSVSDSMAVLTSIWDGI*LSLWPF Trigger: AAATGGCCACAATGAAAGCCAGATTCCATCCCAAAT...GCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR TCA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTCACATCTTGACAGAGTaGTTTTACCAGGGGAAGTAT | + |
Preference number: 4 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPHILTE*FYQGKY Trigger: ATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTG...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR TCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCACAGTTCTTTCGTACTaGAGTATATTTCTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGTVLSY*SIFLLL Trigger: CAGGAGAAGAAATATACTTCAGTACGAAAGAACTGT...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCAGAATGGATTCATCTaGTTTGAAAGACTTTTCACA | + |
Preference number: 4 (lower is better) Translates to: TMFLPPFHTLTILAVCRCQNGFI*FERLFT Trigger: TGTGAAAAGTCTTTCAAAGCAGATGAATCCATTCTG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTGGCCATTTTCTTGTTaGAAACCCAGTGTACAAAGT | + |
Preference number: 4 (lower is better) Translates to: HTLTILAVCRCSFSTIRFWPFSC*KPSVQS Trigger: ACTTTGTACACTGGGTTTGCAACAAGAAAATGGCCA...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | ACCACAGACAGCTGCTCTGAGCAGAGAGCTCATAGGAAATACAGTGCCTTCCTTTATATCGTAGAAAAATaGATAGAGTTCGTGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: TTDSCSEQRAHRKYSAFLYIVEK*IEFVQL Trigger: CAGCTGCACGAACTCTATGCATTTTTCTACGATATA...AAGGAAGGCACTGTATTTCCTATGAGCTCTCTGCTCAGAGCAGCTGTCTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACTATATCGTAGAAAAATaGATAGAGTTCGTGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNYIVEK*IEFVQL Trigger: CAGCTGCACGAACTCTATGCATTTTTCTACGATATA...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCATTTGGGATGGAATCTaGCTTTCATTGTGGCCATTT | + |
Preference number: 4 (lower is better) Translates to: TLTILAVCRCSFSTIRFSIWDGI*LSLWPF Trigger: AAATGGCCACAATGAAAGCCAGATTCCATCCCAAAT...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | TGGTTACCAGAAGTCAATTTAGACAAGCAGGCTAAGTTAGACTGCCATGGGATGAATAGTGTGTCTGACTaGCACTTCAGGGTCATGACA | + |
Preference number: 4 (lower is better) Translates to: WLPEVNLDKQAKLDCHGMNSVSD*HFRVMT Trigger: TGTCATGACCCTGAAGTGCCAGTCAGACACACTATT...CATCCCATGGCAGTCTAACTTAGCCTGCTTGTCTAAATTGACTTCTGGTAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGGCGCAGACTTCACCTTaGGCAGCAGGTAGCAAAGTT | + |
Preference number: 4 (lower is better) Translates to: READNSFIQSVSGNDILKAQTSP*AAGSKV Trigger: AACTTTGCTACCTGCTGCCCAAGGTGAAGTCTGCGC...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | TGGTTACCAGAAGTCAATTTAGACAAGCAGGCTAAGTTAGACTGCCATGGGATGAGTGCTGATCTGGAGTaGAAATTCCATAGAGTCCAT | + |
Preference number: 4 (lower is better) Translates to: WLPEVNLDKQAKLDCHGMSADLE*KFHRVH Trigger: ATGGACTCTATGGAATTTTCACTCCAGATCAGCACT...CATCCCATGGCAGTCTAACTTAGCCTGCTTGTCTAAATTGACTTCTGGTAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | GAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAAAAATCTCAAGTGCTaGTCTGGAGTGAAAATTCCA | + |
Preference number: 4 (lower is better) Translates to: EAGTLLAFRVRNESSVSDKNLKC*SGVKIP Trigger: TGGAATTTTCACTCCAGATCAGCACTTGAGATTTTT...GTCACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
||
CDS-3UTR TCA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCACAGTTCTTTCGTACTaGAGTATATTTCTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: TLTILAVCRCSFSTIRFSTVLSY*SIFLLL Trigger: CAGGAGAAGAAATATACTTCAGTACGAAAGAACTGT...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR GCA 90 bp | TGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCCAGAATGGATTCATCTaGTTTGAAAGACTTTTCACA | + |
Preference number: 4 (lower is better) Translates to: CWHFEFGMSHQLVTAWQSQNGFI*FERLFT Trigger: TGTGAAAAGTCTTTCAAAGCAGATGAATCCATTCTG...GGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR GCA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGAGGAAGCTGGAACACTaGTGGCATTTCGAGTTCGGA | + |
Preference number: 4 (lower is better) Translates to: READNSFIQSVSGNDILKRKLEH*WHFEFG Trigger: TCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCT...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | ACCACAGACAGCTGCTCTGAGCAGAGAGCTCATAGGAAATACAGTGCCTTCCTTAAGTTCCAAGATTTCTaGAAGGTGATTTATAAGAGC | + |
Preference number: 4 (lower is better) Translates to: TTDSCSEQRAHRKYSAFLKFQDF*KVIYKS Trigger: GCTCTTATAAATCACCTTCCAGAAATCTTGGAACTT...AAGGAAGGCACTGTATTTCCTATGAGCTCTCTGCTCAGAGCAGCTGTCTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCAAGTTCCAAGATTTCTaGAAGGTGATTTATAAGAGC | + |
Preference number: 4 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGKFQDF*KVIYKS Trigger: GCTCTTATAAATCACCTTCCAGAAATCTTGGAACTT...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGGGTTTGCAATCACACTaGCTCCTTGGACATCTTGAC | + |
Preference number: 4 (lower is better) Translates to: READNSFIQSVSGNDILKGLQSH*LLGHLD Trigger: GTCAAGATGTCCAAGGAGCCAGTGTGATTGCAAACC...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | ATGGAATTATTAGCATTAGTACAAATGGTGCTGTTGACATGGCGTGAGCATGATTCACTCGATATGATATaGGGCAGACAGGTGTACTTC | + |
Preference number: 4 (lower is better) Translates to: MELLALVQMVLLTWREHDSLDMI*GRQVYF Trigger: GAAGTACACCTGTCTGCCTCATATCATATCGAGTGA...ATCATGCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR GCA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTCAGAATGGATTCATCTaGTTTGAAAGACTTTTCACA | + |
Preference number: 4 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPQNGFI*FERLFT Trigger: TGTGAAAAGTCTTTCAAAGCAGATGAATCCATTCTG...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CCA 90 bp | ATGGAATTATTAGCATTAGTACAAATGGTGCTGTTGACATGGCGTGAGCATGATCTCTACGATTTGGGATaGAATCTGGCTTTCATTGTG | + |
Preference number: 4 (lower is better) Translates to: MELLALVQMVLLTWREHDLYDLG*NLAFIV Trigger: CACAATGAAAGCCAGATTCCATCCCAAATCGTAGAG...ATCATGCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR TCA 90 bp | ATGGAATTATTAGCATTAGTACAAATGGTGCTGTTGACATGGCGTGAGCATGATAAGGGAAGTATAGTTTaGCTTCTGTCATCTGTATCG | + |
Preference number: 4 (lower is better) Translates to: MELLALVQMVLLTWREHDKGSIV*LLSSVS Trigger: CGATACAGATGACAGAAGTCAAACTATACTTCCCTT...ATCATGCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CCA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGGCTATGTTTTCTAACTaGCGACACATACAAGATCGA | + |
Preference number: 4 (lower is better) Translates to: READNSFIQSVSGNDILKAMFSN*RHIQDR Trigger: TCGATCTTGTATGTGTCGCCAGTTAGAAAACATAGC...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | GCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGATTTCTTCTGGTGTCTaGAGGCTCCGGCGGACCGGC | + |
Preference number: 5 (lower is better) Translates to: AVLPGPREVLGMTGLGEKISSGV*RLRRTG Trigger: GCCGGTCCGCCGGAGCCTCAAGACACCAGAAGAAAT...CTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTTGGACAGGCTCTGAGTaGATGTCCTGGAGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: LWIGCVTWPTGSAGHDRVWTGSE*MSWSLC Trigger: GCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCA...AACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | AGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCACTGGAGCACTCGGAATTTCTTCTGGTGTCTaGAGGCTCCGGCGGACCGGC | + |
Preference number: 5 (lower is better) Translates to: SRQYTPSWSSLHCTGALGISSGV*RLRRTG Trigger: GCCGGTCCGCCGGAGCCTCAAGACACCAGAAGAAAT...TCCGAGTGCTCCAGTGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | GAGTCATCAGTTAGTGACAGCATGGCAGTCCTCACCAGCCCTGAGACGGAAGACTTCTTCTCAAAGCTTTaGTCACTGGCCAGCCTCCCG | + |
Preference number: 5 (lower is better) Translates to: ESSVSDSMAVLTSPETEDFFSKL*SLASLP Trigger: CGGGAGGCTGGCCAGTGACAAAAGCTTTGAGAAGAA...GTCTTCCGTCTCAGGGCTGGTGAGGACTGCCATGCTGTCACTAACTGATGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCATGTTGGAAACAAGTGGATaGAGAATCTCATGCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: PLLFGSAVLPGPREVLGMLETSG*RISCLR Trigger: CCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAA...CATGCCCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTACGCGACTGGACGGTTaGGGAAAGCTGTGCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: FLPPFHTLTILAVCRCSFTRLDG*GKLCLG Trigger: TCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGT...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACACGCGACTGGACGGTTaGGGAAAGCTGTGCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNTRLDG*GKLCLG Trigger: TCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGT...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTACGCGACTGGACGGTTaGGGAAAGCTGTGCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: IFTSTTLWIGCVTWPTGSTRLDG*GKLCLG Trigger: TCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGT...ACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCTGGACAGGCTCTGAGTaGATGTCCTGGAGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: LPPFHTLTILAVCRCSFSWTGSE*MSWSLC Trigger: GCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCA...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTTGGACAGGCTCTGAGTaGATGTCCTGGAGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: TMFLPPFHTLTILAVCRCWTGSE*MSWSLC Trigger: GCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCA...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | TACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGAGGACTTCTCTGACTTaGGGTAAGACTCTCCGAAGT | + |
Preference number: 5 (lower is better) Translates to: YFHYSLDRLCYLAHGKCWRTSLT*GKTLRS Trigger: ACTTCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCT...CCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TTACCTGGCCCACGGGAAGTGCTGGGCATGACAGGGTTAGGAGAAAAGGAAGCTAGGTGTGGACTGACATaGATTCTTCCTGAAGGATGG | + |
Preference number: 5 (lower is better) Translates to: LPGPREVLGMTGLGEKEARCGLT*ILPEGW Trigger: CCATCCTTCAGGAAGAATCAATGTCAGTCCACACCT...AGCTTCCTTTTCTCCTAACCCTGTCATGCCCAGCACTTCCCGTGGGCCAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGTGCTGGGCCTCAGGGTTTCTTTaGGCAATAATTCTACTGCGG | + |
Preference number: 5 (lower is better) Translates to: YFHYSLDRLCYLAHGKCWASGFL*AIILLR Trigger: CCGCAGTAGAATTATTGCCAAAAGAAACCCTGAGGC...CCAGCACTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS GCA 90 bp | AAAAAGGACACTGCAGCCGTTAGCTGCATCTCCACGCTTGCGACATaGAGGACTTCTCTGACTTTGGGTAAGACTCTCCGAAGTGTCTCA | + |
Preference number: 5 (lower is better) Translates to: KKDTAAVSCISTLAT*RTSLTLGKTLRSVS Trigger: TGAGACACTTCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGAGATGCAGCTAACGGCTGCAGTGTCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CCA 90 bp | AGGAGTGTGCACAGGTGTGGACTGACATTGATTCTTCCTGAAGGATaGTCAAAAAGGACACTGCAGCCGTTAGCTGCATCTCCACGCTTG | + |
Preference number: 5 (lower is better) Translates to: RSVHRCGLTLILPEG*SKRTLQPLAASPRL Trigger: CAAGCGTGGAGATGCAGCTAACGGCTGCAGTGTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTCAGTCCACACCTGTGCACACTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CCA 90 bp | GGAGGAGATGCATGTCTGCAGGAATCTTCAGCGCAGACTTCACCTTaGGCAGCAGGTAGCAAAGTTTCATTCTCACATTTGCCACTGGGT | + |
Preference number: 5 (lower is better) Translates to: GGDACLQESSAQTSP*AAGSKVSFSHLPLG Trigger: ACCCAGTGGCAAATGTGAGAATGAAACTTTGCTACCTGCTGCCCAAGGTGAAGTCTGCGCTGAAGATTCCTGCAGACATGCATCTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGAAGGAAGCACCACATTCTTaGTCAGTTCTGCCCCAATGC | + |
Preference number: 5 (lower is better) Translates to: HLYFHYSLDRLCYLAHGKEAPHS*SVLPQC Trigger: GCATTGGGGCAGAACTGACAAAGAATGTGGTGCTTC...CTTCCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTTCTTCTCAAAGCTTTaGTCACTGGCCAGCCTCCCG | + |
Preference number: 5 (lower is better) Translates to: FLPPFHTLTILAVCRCSFFFSKL*SLASLP Trigger: CGGGAGGCTGGCCAGTGACAAAAGCTTTGAGAAGAA...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS TCA 90 bp | CGTTTCTTCTCAAAGCTTTTGTCACTGGCCAGCCTCCCGTCACTCTaGTGCTTCTCCTTCTCCAGCTGTTCCATTTCCAAAAACAGCAGC | + |
Preference number: 5 (lower is better) Translates to: RFFSKLLSLASLPSL*CFSFSSCSISKNSS Trigger: GCTGCTGTTTTTGGAAATGGAACAGCTGGAGAAGGAGAAGCATCAGAGTGACGGGAGGCTGGCCAGTGACAAAAGCTTTGAGAAGAAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 90 bp | GAGGAGGGTCCAGGAACAGAAATGGGCAAGTTCTTGGACAGGCTCTaGGTTGATGTCCTGGAGTCTCTGCGTTTCTTCTCAAAGCTTTTG | + |
Preference number: 5 (lower is better) Translates to: EEGPGTEMGKFLDRL*VDVLESLRFFSKLL Trigger: CAAAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGGACCCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 90 bp | GAACAGAAATGGGCAAGTTCTTGGACAGGCTCTGAGTTGATGTCCTaGAGTCTCTGCGTTTCTTCTCAAAGCTTTTGTCACTGGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: EQKWASSWTGSELMS*SLCVSSQSFCHWPA Trigger: GGCTGGCCAGTGACAAAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGAACTTGCCCATTTCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCGGCTCCTTGGACATCTaGACCAGCACTGAGCAGATA | + |
Preference number: 5 (lower is better) Translates to: TLTILAVCRCSFSTIRFSGSLDI*TSTEQI Trigger: TATCTGCTCAGTGCTGGTCAAGATGTCCAAGGAGCC...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | AGGAAGCTGGAACACTGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGGGCTCCTTGGACATCTaGACCAGCACTGAGCAGATA | + |
Preference number: 5 (lower is better) Translates to: RKLEHCWHFEFGMSHQLVGSLDI*TSTEQI Trigger: TATCTGCTCAGTGCTGGTCAAGATGTCCAAGGAGCC...CACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCAGTGTTCCAGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGGACTTCTCTGACTTaGGGTAAGACTCTCCGAAGT | + |
Preference number: 5 (lower is better) Translates to: TMFLPPFHTLTILAVCRCRTSLT*GKTLRS Trigger: ACTTCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCT...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCAGGTGTGGACTGACATaGATTCTTCCTGAAGGATGG | + |
Preference number: 5 (lower is better) Translates to: LPPFHTLTILAVCRCSFSRCGLT*ILPEGW Trigger: CCATCCTTCAGGAAGAATCAATGTCAGTCCACACCT...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCGCCTCAGGGTTTCTTTaGGCAATAATTCTACTGCGG | + |
Preference number: 5 (lower is better) Translates to: LPPFHTLTILAVCRCSFSASGFL*AIILLR Trigger: CCGCAGTAGAATTATTGCCAAAAGAAACCCTGAGGC...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACGAAGCACCACATTCTTaGTCAGTTCTGCCCCAATGC | + |
Preference number: 5 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNEAPHS*SVLPQC Trigger: GCATTGGGGCAGAACTGACAAAGAATGTGGTGCTTC...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCTTCTTCTCAAAGCTTTaGTCACTGGCCAGCCTCCCG | + |
Preference number: 5 (lower is better) Translates to: TLTILAVCRCSFSTIRFSFFSKL*SLASLP Trigger: CGGGAGGCTGGCCAGTGACAAAAGCTTTGAGAAGAA...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS TCA 90 bp | GGGTCCAGGAACAGAAATGGGCAAGTTCTTGGACAGGCTCTGAGTTaGTGTCCTGGAGTCTCTGCGTTTCTTCTCAAAGCTTTTGTCACT | + |
Preference number: 5 (lower is better) Translates to: GSRNRNGQVLGQALS*CPGVSAFLLKAFVT Trigger: AGTGACAAAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS GCA 90 bp | CCGAAGTGTCTCAGTAGGATTCTGTCGCATCAAAAATGGAAGGTTTaGAATCACACTGGCTCCTTGGACATCTTGACCAGCACTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: PKCLSRILSHQKWKV*NHTGSLDILTSTEQ Trigger: CTGCTCAGTGCTGGTCAAGATGTCCAAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTGATGCGACAGAATCCTACTGAGACACTTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CCA 90 bp | ACGCTCTCAGGAATTTCATGCAGAGAGAAGAGGGAACCTGAGTTCTaGGAAGCAGAGGGGGATTTTTCTCTTGTTGATGCAGTGCTAGAG | + |
Preference number: 5 (lower is better) Translates to: TLSGISCREKREPEF*EAEGDFSLVDAVLE Trigger: CTCTAGCACTGCATCAACAAGAGAAAAATCCCCCTCTGCTTCCCAGAACTCAGGTTCCCTCTTCTCTCTGCATGAAATTCCTGAGAGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | GTGCATCTTTACTTCCACTACTCTTTGGATCGGCTGTGTTACCTGGCCCACGGGTCAAAAATGGAAGGTTaGCAATCACACTGGCTCCTT | + |
Preference number: 5 (lower is better) Translates to: VHLYFHYSLDRLCYLAHGSKMEG*QSHWLL Trigger: AAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTGA...CCCGTGGGCCAGGTAACACAGCCGATCCAAAGAGTAGTGGAAGTAAAGATGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTGCCTCAGGGTTTCTTTaGGCAATAATTCTACTGCGG | + |
Preference number: 5 (lower is better) Translates to: FLPPFHTLTILAVCRCSFASGFL*AIILLR Trigger: CCGCAGTAGAATTATTGCCAAAAGAAACCCTGAGGC...AAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCTTGGAAACAAGTGGATaGAGAATCTCATGCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: LPPFHTLTILAVCRCSFSLETSG*RISCLR Trigger: CCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAA...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCTGGGAAAGCTGTGCCTaGGAAACAAGTGGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGWESCA*ETSGLR Trigger: TCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCA...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTGTGGCCATTTTCTTGTaGCAAACCCAGTGTACAAAG | + |
Preference number: 5 (lower is better) Translates to: TMFLPPFHTLTILAVCRCVAIFL*QTQCTK Trigger: CTTTGTACACTGGGTTTGCAACAAGAAAATGGCCAC...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCCTCCTGCTCTACGATTaGGGATGGAATCTGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: HTLTILAVCRCSFSTIRFLLLYD*GWNLAF Trigger: GAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGAG...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTCCCTCCTGCTCTACGATTaGGGATGGAATCTGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: TLTILAVCRCSFSTIRFSLLLYD*GWNLAF Trigger: GAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGAG...GGAGAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | TTTAAGGTAGCCTTCCGGGGCTGTGCATCTTTACTTCCACTACTCTTTGGATCGCTCCTGCTCTACGATTaGGGATGGAATCTGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: FKVAFRGCASLLPLLFGSLLLYD*GWNLAF Trigger: GAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGAG...CGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGGCTACCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCAGGTGTGGACTGACATaGATTCTTCCTGAAGGATGG | + |
Preference number: 5 (lower is better) Translates to: HTLTILAVCRCSFSTIRFRCGLT*ILPEGW Trigger: CCATCCTTCAGGAAGAATCAATGTCAGTCCACACCT...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | GATTCTCCGCTGACTGCTTGTCTCCTTCACCAAGCAGTTGACTTAAGGATTGGATGGGAAAGCTGTGCCTaGGAAACAAGTGGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: DSPLTACLLHQAVDLRIGWESCA*ETSGLR Trigger: TCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCA...TCCAATCCTTAAGTCAACTGCTTGGTGAAGGAGACAAGCAGTCAGCGGAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGAAGCACCACATTCTTaGTCAGTTCTGCCCCAATGC | + |
Preference number: 5 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPEAPHS*SVLPQC Trigger: GCATTGGGGCAGAACTGACAAAGAATGTGGTGCTTC...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCATTGTGGCCATTTTCTaGTTGCAAACCCAGTGTACA | + |
Preference number: 5 (lower is better) Translates to: LPPFHTLTILAVCRCSFSIVAIF*LQTQCT Trigger: TGTACACTGGGTTTGCAACAAGAAAATGGCCACAAT...GGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | GGGCAAGTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACGTTTCATTCTCACATTaGCCACTGGGTCATGGGTTA | + |
Preference number: 5 (lower is better) Translates to: GQVSHQLHDVPSSLPHFNVSFSH*PLGHGL Trigger: TAACCCATGACCCAGTGGCAAATGTGAGAATGAAAC...GTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAACTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS TCA 90 bp | CTTGGGCAGCAGGTAGCAAAGTTTCATTCGAGTTATGAAGCCAACTaGGAAGTCCATCAACAGACAACTCACATTTGCCACTGGGTCATG | + |
Preference number: 5 (lower is better) Translates to: LGQQVAKFHSSYEAN*EVHQQTTHICHWVM Trigger: CATGACCCAGTGGCAAATGTGAGTTGTCTGTTGATGGACTTCTCAGTTGGCTTCATAACTCGAATGAAACTTTGCTACCTGCTGCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190151.2 |
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CDS-3UTR CAA 90 bp | CACACTTTAACAATCCTGGCCGTCTGTCGCTGTAGCTTTTCCACCATCAGATTCTTGGAAACAAGTGGATaGAGAATCTCATGCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: HTLTILAVCRCSFSTIRFLETSG*RISCLR Trigger: CCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAA...GAATCTGATGGTGGAAAAGCTACAGCGACAGACGGCCAGGATTGTTAAAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | GATTCTCCGCTGACTGCTTGTCTCCTTCACCAAGCAGTTGACTTAAGGATTGGAGTGGCCATTTTCTTGTaGCAAACCCAGTGTACAAAG | + |
Preference number: 5 (lower is better) Translates to: DSPLTACLLHQAVDLRIGVAIFL*QTQCTK Trigger: CTTTGTACACTGGGTTTGCAACAAGAAAATGGCCAC...TCCAATCCTTAAGTCAACTGCTTGGTGAAGGAGACAAGCAGTCAGCGGAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TGCTGGCATTTCGAGTTCGGAATGAGTCATCAGTTAGTGACAGCATGGCAGTCCATTGTGGCCATTTTCTaGTTGCAAACCCAGTGTACA | + |
Preference number: 5 (lower is better) Translates to: CWHFEFGMSHQLVTAWQSIVAIF*LQTQCT Trigger: TGTACACTGGGTTTGCAACAAGAAAATGGCCACAAT...GGACTGCCATGCTGTCACTAACTGATGACTCATTCCGAACTCGAAATGCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | TTTAAGGTAGCCTTCCGGGGCTGTGCATCTTTACTTCCACTACTCTTTGGATCGGTTTCATTCTCACATTaGCCACTGGGTCATGGGTTA | + |
Preference number: 5 (lower is better) Translates to: FKVAFRGCASLLPLLFGSVSFSH*PLGHGL Trigger: TAACCCATGACCCAGTGGCAAATGTGAGAATGAAAC...CGATCCAAAGAGTAGTGGAAGTAAAGATGCACAGCCCCGGAAGGCTACCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | CACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGCTTTTACTAGCACACTaGTCTAAGGTGCCATATTTT | + |
Preference number: 5 (lower is better) Translates to: HDVPSSLPHFNNPGRLSLLLLAH*SKVPYF Trigger: AAAATATGGCACCTTAGACAAGTGTGCTAGTAAAAG...CAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS TCA 90 bp | CAGACTTCACCTTGGGCAGCAGGTAGCAAAGTTTCATTCGAGTTATaGAGCCAACTGAGAAGTCCATCAACAGACAACTCACATTTGCCA | + |
Preference number: 5 (lower is better) Translates to: QTSPWAAGSKVSFEL*SQLRSPSTDNSHLP Trigger: TGGCAAATGTGAGTTGTCTGTTGATGGACTTCTCAGTTGGCTTCATAACTCGAATGAAACTTTGCTACCTGCTGCCCAAGGTGAAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190151.2 |
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CDS-3UTR CAA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGTTTCATTCTCACATTaGCCACTGGGTCATGGGTTA | + |
Preference number: 5 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPVSFSH*PLGHGL Trigger: TAACCCATGACCCAGTGGCAAATGTGAGAATGAAAC...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTTGGCTTCGAGTCAATTaGGATTTCTTGATTTCTTTG | + |
Preference number: 5 (lower is better) Translates to: TMFLPPFHTLTILAVCRCWLRVN*DFLISL Trigger: CAAAGAAATCAAGAAATCCAAATTGACTCGAAGCCA...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | ACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCCGTCTGTCGCTGTCTTTTACTAGCACACTaGTCTAAGGTGCCATATTTT | + |
Preference number: 5 (lower is better) Translates to: TMFLPPFHTLTILAVCRCLLLAH*SKVPYF Trigger: AAAATATGGCACCTTAGACAAGTGTGCTAGTAAAAG...ACAGCGACAGACGGCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | TGTCTCTTCAGTCCAGCAGGCAGTACACACCAAGTTGGAGCTCATTACACTGCAGATTTCTTGATTTCTTaGCTTGTTGATGCAGTGCTA | + |
Preference number: 5 (lower is better) Translates to: CLFSPAGSTHQVGAHYTADFLIS*LVDAVL Trigger: TAGCACTGCATCAACAAGCAAAGAAATCAAGAAATC...TGCAGTGTAATGAGCTCCAACTTGGTGTGTACTGCCTGCTGGACTGAAGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | TCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGGCTGGCTTCGAGTCAATTaGGATTTCTTGATTTCTTTG | + |
Preference number: 5 (lower is better) Translates to: SHQLHDVPSSLPHFNNPGWLRVN*DFLISL Trigger: CAAAGAAATCAAGAAATCCAAATTGACTCGAAGCCA...GCCAGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS-3UTR CAA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGAATCACACTGGCTCCTaGGACATCTTGACCAGCACT | + |
Preference number: 5 (lower is better) Translates to: READNSFIQSVSGNDILKNHTGS*DILTST Trigger: AGTGCTGGTCAAGATGTCCAAGGAGCCAGTGTGATT...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | ATGGAATTATTAGCATTAGTACAAATGGTGCTGTTGACATGGCGTGAGCATGATTGGGAAAGCTGTGCCTaGGAAACAAGTGGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: MELLALVQMVLLTWREHDWESCA*ETSGLR Trigger: TCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCA...ATCATGCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS-3UTR CAA 90 bp | GTTTCACATCAGCTGCACGATGTTCCTTCCTCCCTTCCACACTTTAACAATCCTGATTTCTTGATTTCTTaGCTTGTTGATGCAGTGCTA | + |
Preference number: 5 (lower is better) Translates to: VSHQLHDVPSSLPHFNNPDFLIS*LVDAVL Trigger: TAGCACTGCATCAACAAGCAAAGAAATCAAGAAATC...AGGATTGTTAAAGTGTGGAAGGGAGGAAGGAACATCGTGCAGCTGATGTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |
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CDS TCA 90 bp | GCGACACATACAAGATCGAACTTCATATTCCACATCTTGACAGAGTaGTTTTACCAGGGGAAGTATTTCTCTCTTAATGCTATGGGCATC | + |
Preference number: 5 (lower is better) Translates to: ATHTRSNFIFHILTE*FYQGKYFSLNAMGI Trigger: GATGCCCATAGCATTAAGAGAGAAATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTGGAATATGAAGTTCGATCTTGTATGTGTCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS-3UTR CAA 90 bp | AGAGAAGCTGACAATAGCTTCATACAGTCTGTCTCAGGAAATGACATCTTAAAGGTGGCCATTTTCTTGTaGCAAACCCAGTGTACAAAG | + |
Preference number: 5 (lower is better) Translates to: READNSFIQSVSGNDILKVAIFL*QTQCTK Trigger: CTTTGTACACTGGGTTTGCAACAAGAAAATGGCCAC...CTTTAAGATGTCATTTCCTGAGACAGACTGTATGAAGCTATTGTCAGCTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS TCA 90 bp | AAAAACAATCATGGCCGGAAAGTTGTAAGCACAGTTCTTTCGTACTaGAGTATATTTCTTCTCCTGCTCTACGATTTGGGATGGAATCTG | + |
Preference number: 5 (lower is better) Translates to: KNNHGRKVVSTVLSY*SIFLLLLYDLGWNL Trigger: CAGATTCCATCCCAAATCGTAGAGCAGGAGAAGAAATATACTTCAGTACGAAAGAACTGTGCTTACAACTTTCCGGCCATGATTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS-3UTR CAA 90 bp | ATGGAATTATTAGCATTAGTACAAATGGTGCTGTTGACATGGCGTGAGCATGATTCAAAAATGGAAGGTTaGCAATCACACTGGCTCCTT | + |
Preference number: 5 (lower is better) Translates to: MELLALVQMVLLTWREHDSKMEG*QSHWLL Trigger: AAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTGA...ATCATGCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021631.12 |
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CDS TCA 90 bp | TCTAACTGGCGACACATACAAGATCGAACTTCATATTCCACATCTTaGCAGAGTGATTTTACCAGGGGAAGTATTTCTCTCTTAATGCTA | + |
Preference number: 5 (lower is better) Translates to: SNWRHIQDRTSYSTS*QSDFTRGSISLLML Trigger: TAGCATTAAGAGAGAAATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTGGAATATGAAGTTCGATCTTGTATGTGTCGCCAGTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 90 bp | TTGAAAGACTTTTCACAGAACGATTTCACTAAGGGAAGTATAGTTTaGCTTCTGTCATCTGTATCGAACATGTCAAGCATGTTAACCAAG | + |
Preference number: 5 (lower is better) Translates to: LKDFSQNDFTKGSIV*LLSSVSNMSSMLTK Trigger: CTTGGTTAACATGCTTGACATGTTCGATACAGATGACAGAAGTCAAACTATACTTCCCTTAGTGAAATCGTTCTGTGAAAAGTCTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS GCA 72 bp | ACTGCAGCCGTTAGCTGCATCTCCACGCTTGCGACATaGAGGACTTCTCTGACTTTGGGTAAGACTCTCCGA | + |
Preference number: 6 (lower is better) Translates to: TAAVSCISTLAT*RTSLTLGKTLR Trigger: TCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGAGATGCAGCTAACGGCTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CAA 90 bp | GTTAGCTGCATCTCCACGCTTGCGACATGCAGGACTTCTCTGACTTaGGGTAAGACTCTCCGAAGTGTCTCAGTAGGATTCTGTCGCATC | + |
Preference number: 6 (lower is better) Translates to: VSCISTLATCRTSLT*GKTLRSVSVGFCRI Trigger: GATGCGACAGAATCCTACTGAGACACTTCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGAGATGCAGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS GCA 72 bp | TCTTGGACAGGCTCTGAGTTGATGTCCTGGAGTCTCTaGGTTTCTTCTCAAAGCTTTTGTCACTGGCCAGCC | + |
Preference number: 6 (lower is better) Translates to: SWTGSELMSWSL*VSSQSFCHWPA Trigger: GGCTGGCCAGTGACAAAAGCTTTGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | GAGTGTGCACAGGTGTGGACTGACATTGATTCTTCCTaGAGGATGGTCAAAAAGGACACTGCAGCCGTTAGC | + |
Preference number: 6 (lower is better) Translates to: ECAQVWTDIDSS*RMVKKDTAAVS Trigger: GCTAACGGCTGCAGTGTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTCAGTCCACACCTGTGCACACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | TCAAAGCTTTTGTCACTGGCCAGCCTCCCGTCACTCTaGTGCTTCTCCTTCTCCAGCTGTTCCATTTCCAAA | + |
Preference number: 6 (lower is better) Translates to: SKLLSLASLPSL*CFSFSSCSISK Trigger: TTTGGAAATGGAACAGCTGGAGAAGGAGAAGCATCAGAGTGACGGGAGGCTGGCCAGTGACAAAAGCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | CCAGGAACAGAAATGGGCAAGTTCTTGGACAGGCTCTaGGTTGATGTCCTGGAGTCTCTGCGTTTCTTCTCA | + |
Preference number: 6 (lower is better) Translates to: PGTEMGKFLDRL*VDVLESLRFFS Trigger: TGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGAACTTGCCCATTTCTGTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS GCA 72 bp | CGGGAAGCACCACATTCTTTGTCAGTTCTGCCCCAATaGCCTGAGCTATGTTTTCTAACTGGCGACACATAC | + |
Preference number: 6 (lower is better) Translates to: REAPHSLSVLPQ*PELCFLTGDTY Trigger: GTATGTGTCGCCAGTTAGAAAACATAGCTCAGGGCATTGGGGCAGAACTGACAAAGAATGTGGTGCTTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS GCA 72 bp | AGCTTTCTCACACACATTTCTAGCTGCTGGAGGAGATaGATGTCTGCAGGAATCTTCAGCGCAGACTTCACC | + |
Preference number: 6 (lower is better) Translates to: SFLTHISSCWRR*MSAGIFSADFT Trigger: GGTGAAGTCTGCGCTGAAGATTCCTGCAGACATGCATCTCCTCCAGCAGCTAGAAATGTGTGTGAGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190151.2 |
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CDS CAA 72 bp | ATCTCCACGCTTGCGACATGCAGGACTTCTCTGACTTaGGGTAAGACTCTCCGAAGTGTCTCAGTAGGATTC | + |
Preference number: 6 (lower is better) Translates to: ISTLATCRTSLT*GKTLRSVSVGF Trigger: GAATCCTACTGAGACACTTCGGAGAGTCTTACCCAAAGTCAGAGAAGTCCTGCATGTCGCAAGCGTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CAA 72 bp | ACTAAACGCGACTGGACGGTTTGGGAAAGCTGTGCCTaGGAAACAAGTGGATTGAGAATCTCATGCCTCAGG | + |
Preference number: 6 (lower is better) Translates to: TKRDWTVWESCA*ETSGLRISCLR Trigger: CCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 72 bp | CACAGGTGTGGACTGACATTGATTCTTCCTGAAGGATaGTCAAAAAGGACACTGCAGCCGTTAGCTGCATCT | + |
Preference number: 6 (lower is better) Translates to: HRCGLTLILPEG*SKRTLQPLAAS Trigger: AGATGCAGCTAACGGCTGCAGTGTCCTTTTTGACCATCCTTCAGGAAGAATCAATGTCAGTCCACACCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CCA 72 bp | CTGGACGGTTTGGGAAAGCTGTGCCTTGGAAACAAGTaGATTGAGAATCTCATGCCTCAGGGTTTCTTTTGG | + |
Preference number: 6 (lower is better) Translates to: LDGLGKLCLGNK*IENLMPQGFFW Trigger: CCAAAAGAAACCCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACCGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 72 bp | GCATGTCTGCAGGAATCTTCAGCGCAGACTTCACCTTaGGCAGCAGGTAGCAAAGTTTCATTCTCACATTTG | + |
Preference number: 6 (lower is better) Translates to: ACLQESSAQTSP*AAGSKVSFSHL Trigger: CAAATGTGAGAATGAAACTTTGCTACCTGCTGCCCAAGGTGAAGTCTGCGCTGAAGATTCCTGCAGACATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | AACAGAAATGGGCAAGTTCTTGGACAGGCTCTGAGTTaGTGTCCTGGAGTCTCTGCGTTTCTTCTCAAAGCT | + |
Preference number: 6 (lower is better) Translates to: NRNGQVLGQALS*CPGVSAFLLKA Trigger: AGCTTTGAGAAGAAACGCAGAGACTCCAGGACATCAACTCAGAGCCTGTCCAAGAACTTGCCCATTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 72 bp | CCGAAGTGTCTCAGTAGGATTCTGTCGCATCAAAAATaGAAGGTTTGCAATCACACTGGCTCCTTGGACATC | + |
Preference number: 6 (lower is better) Translates to: PKCLSRILSHQK*KVCNHTGSLDI Trigger: GATGTCCAAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTGATGCGACAGAATCCTACTGAGACACTTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS CCA 72 bp | GGAATTTCATGCAGAGAGAAGAGGGAACCTGAGTTCTaGGAAGCAGAGGGGGATTTTTCTCTTGTTGATGCA | + |
Preference number: 6 (lower is better) Translates to: GISCREKREPEF*EAEGDFSLVDA Trigger: TGCATCAACAAGAGAAAAATCCCCCTCTGCTTCCCAGAACTCAGGTTCCCTCTTCTCTCTGCATGAAATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189871.7 |
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CDS CAA 90 bp | TTACAGCTAACTAAACGCGACTGGACGGTTTGGGAAAGCTGTGCCTaGGAAACAAGTGGATTGAGAATCTCATGCCTCAGGGTTTCTTTT | + |
Preference number: 6 (lower is better) Translates to: LQLTKRDWTVWESCA*ETSGLRISCLRVSF Trigger: AAAAGAAACCCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGTTAGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | CCTTGGGCAGCAGGTAGCAAAGTTTCATTCGAGTTATaGAGCCAACTGAGAAGTCCATCAACAGACAACTCA | + |
Preference number: 6 (lower is better) Translates to: PWAAGSKVSFEL*SQLRSPSTDNS Trigger: TGAGTTGTCTGTTGATGGACTTCTCAGTTGGCTTCATAACTCGAATGAAACTTTGCTACCTGCTGCCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190151.2 |
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CDS CAA 72 bp | CATCAAAAATGGAAGGTTTGCAATCACACTGGCTCCTaGGACATCTTGACCAGCACTGAGCAGATAAACAGC | + |
Preference number: 6 (lower is better) Translates to: HQKWKVCNHTGS*DILTSTEQINS Trigger: GCTGTTTATCTGCTCAGTGCTGGTCAAGATGTCCAAGGAGCCAGTGTGATTGCAAACCTTCCATTTTTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000189871.7 |
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CDS GCA 72 bp | AGCTGTGCCTTGGAAACAAGTGGATTGAGAATCTCATaGCTCAGGGTTTCTTTTGGCAATAATTCTACTGCG | + |
Preference number: 6 (lower is better) Translates to: SCALETSGLRIS*LRVSFGNNSTA Trigger: CGCAGTAGAATTATTGCCAAAAGAAACCCTGAGGCATGAGATTCTCAATCCACTTGTTTCCAAGGCACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS GCA 72 bp | GCCTCTGCTCTTGTTTACGATTATATCGTAGAAAAATaGATAGAGTTCGTGCAGCTGCCCTTTGGACAGGTA | + |
Preference number: 6 (lower is better) Translates to: ASALVYDYIVEK*IEFVQLPFGQV Trigger: TACCTGTCCAAAGGGCAGCTGCACGAACTCTATGCATTTTTCTACGATATAATCGTAAACAAGAGCAGAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | CATGGCCGGAAAGTTGTAAGCACAGTTCTTTCGTACTaGAGTATATTTCTTCTCCTGCTCTACGATTTGGGA | + |
Preference number: 6 (lower is better) Translates to: HGRKVVSTVLSY*SIFLLLLYDLG Trigger: TCCCAAATCGTAGAGCAGGAGAAGAAATATACTTCAGTACGAAAGAACTGTGCTTACAACTTTCCGGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS CCA 72 bp | AAAATTTTACAGCTAACTAAACGCGACTGGACGGTTTaGGAAAGCTGTGCCTTGGAAACAAGTGGATTGAGA | + |
Preference number: 6 (lower is better) Translates to: KILQLTKRDWTV*ESCALETSGLR Trigger: TCTCAATCCACTTGTTTCCAAGGCACAGCTTTCCCAAACCGTCCAGTCGCGTTTAGTTAGCTGTAAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 72 bp | CGTAGAAAAATGCATAGAGTTCGTGCAGCTGCCCTTTaGACAGGTAAGACATTATTTGTCATCATGATGGTG | + |
Preference number: 6 (lower is better) Translates to: RRKMHRVRAAAL*TGKTLFVIMMV Trigger: CACCATCATGATGACAAATAATGTCTTACCTGTCCAAAGGGCAGCTGCACGAACTCTATGCATTTTTCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | TTTGTAAGAAACGGTAATAAATCTGGTCACTCGATATaGTATGAGGCAGACAGGTGTACTTCTGCAGCAGCT | + |
Preference number: 6 (lower is better) Translates to: FVRNGNKSGHSI*YEADRCTSAAA Trigger: AGCTGCTGCAGAAGTACACCTGTCTGCCTCATATCATATCGAGTGACCAGATTTATTACCGTTTCTTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CCA 72 bp | CGTACTGAAGTATATTTCTTCTCCTGCTCTACGATTTaGGATGGAATCTGGCTTTCATTGTGGCCATTTTCT | + |
Preference number: 6 (lower is better) Translates to: RTEVYFFSCSTI*DGIWLSLWPFS Trigger: AGAAAATGGCCACAATGAAAGCCAGATTCCATCCCAAATCGTAGAGCAGGAGAAGAAATATACTTCAGTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS CAA 90 bp | CTCTACGATTTGGGATGGAATCTGGCTTTCATTGTGGCCATTTTCTaGTTGCAAACCCAGTGTACAAAGTTTCTTATAAAACTCCAAAAA | + |
Preference number: 6 (lower is better) Translates to: LYDLGWNLAFIVAIF*LQTQCTKFLIKLQK Trigger: TTTTTGGAGTTTTATAAGAAACTTTGTACACTGGGTTTGCAACAAGAAAATGGCCACAATGAAAGCCAGATTCCATCCCAAATCGTAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS TCA 72 bp | ACAAGATCGAACTTCATATTCCACATCTTGACAGAGTaGTTTTACCAGGGGAAGTATTTCTCTCTTAATGCT | + |
Preference number: 6 (lower is better) Translates to: TRSNFIFHILTE*FYQGKYFSLNA Trigger: AGCATTAAGAGAGAAATACTTCCCCTGGTAAAATCACTCTGTCAAGATGTGGAATATGAAGTTCGATCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS TCA 72 bp | TTTTCACAGAACGATTTCACTAAGGGAAGTATAGTTTaGCTTCTGTCATCTGTATCGAACATGTCAAGCATG | + |
Preference number: 6 (lower is better) Translates to: FSQNDFTKGSIV*LLSSVSNMSSM Trigger: CATGCTTGACATGTTCGATACAGATGACAGAAGTCAAACTATACTTCCCTTAGTGAAATCGTTCTGTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS CAA 72 bp | TTGGGATGGAATCTGGCTTTCATTGTGGCCATTTTCTaGTTGCAAACCCAGTGTACAAAGTTTCTTATAAAA | + |
Preference number: 6 (lower is better) Translates to: LGWNLAFIVAIF*LQTQCTKFLIK Trigger: TTTTATAAGAAACTTTGTACACTGGGTTTGCAACAAGAAAATGGCCACAATGAAAGCCAGATTCCATCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 ENSMUST00000190664.2 |
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CDS TCA 72 bp | TTTTTCCTTGGCCCAACTGTTCAATTAGTTTTTGAATaGCTTCATGCCTCTGCTCTTGTTTACGATTATATC | + |
Preference number: 6 (lower is better) Translates to: FFLGPTVQLVFE*LHASALVYDYI Trigger: GATATAATCGTAAACAAGAGCAGAGGCATGAAGTCATTCAAAAACTAATTGAACAGTTGGGCCAAGGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 ENSMUST00000189871.7 |
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CDS CAA 72 bp | TTATTAAAAGATTGGCTTCGAGTCAATTTGGATTTCTaGATTTCTTTGCTTGTTGATGCAGTGCTAGAGGAG | + |
Preference number: 6 (lower is better) Translates to: LLKDWLRVNLDF*ISLLVDAVLEE Trigger: CTCCTCTAGCACTGCATCAACAAGCAAAGAAATCAAGAAATCCAAATTGACTCGAAGCCAATCTTTTAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021631.12 ENSMUST00000187155.7 |