Pregenerated sensors for PPP4R3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020463Ensembl transcript IDs: ENSMUST00000020755.12, ENSMUST00000102856.9, ENSMUST00000148759.2, ENSMUST00000156280.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGCAATGTTATTGGGTACTGAAGTCTCACAATTTCCTCTAGGTTaGACTCTGGGAACAATTAACCCTTCTTACCCCAAATATGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QAMLLGTEVSQFPLG*TLGTINPSYPKYEP Trigger: AGGCTCATATTTGGGGTAAGAAGGGTTAATTGTTCCCAGAGTCCAACCTAGAGGAAATTGTGAGACTTCAGTACCCAATAACATTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCATCATGTGGGTGAGCATATGCATTACACAACTGTTGCCCTTGGACTGGCAGACTCAAGCTCCGTaGGTGAGCAGCTGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PFIMWVSICITQLLPLDWQTQAP*VSSCSS Trigger: ACTGCTGCAGCTGCTCACGCACGGAGCTTGAGTCTG...CCAGTCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148759.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAGACTCAAGCTCCGTaGGTGAGCAGCTGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVVPSKDPFIMWVSICITQTQAP*VSSCSS Trigger: ACTGCTGCAGCTGCTCACGCACGGAGCTTGAGTCTG...TGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| 3UTR CAA 90 bp | GTTCTAGCCACTCCCAGGTTGGTGGAAGAGGAGCATTTCAGAACATaGCTGCTGCATTTCTTGGCTGCTGTTACCTCTAAAAATGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VLATPRLVEEEHFRT*LLHFLAAVTSKNAD Trigger: GTCAGCATTTTTAGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTCCACCAACCTGGGAGTGGCTAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR-3UTR CCA 90 bp | TGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATGTTAGTAAGACCATGTaGTGGGAATCCCCCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: WNLPSCAFQGSFHHVGEHVSKTM*WESPSK Trigger: CTTGCTGGGGGATTCCCACCACATGGTCTTACTAAC...ATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| 3UTR-3UTR GCA 90 bp | GGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATAGCATTACACAACTGTTaGCCTTGGACTGGCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: GIFLVVPSKDPFIMWVSIALHNC*PWTGNQ Trigger: TTGGTTGCCAGTCCAAGGGCAACAGTTGTGTAATGC...TATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148759.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAGTTAGTAAGACCATGTaGTGGGAATCCCCCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTVSKTM*WESPSK Trigger: CTTGCTGGGGGATTCCCACCACATGGTCTTACTAAC...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTCTACACTTTCCTACCTaGCAACCAAGAGTCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ITLLSVEELPRLHMTVIFLHFPT*QPRVSA Trigger: AGCAGAGACTCTTGGTTGCCAGGTAGGAAAGTGTAG...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR-3UTR TCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTTTCTTACCCCAAATATaGGCCTTTCCTTGTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ITLLSVEELPRLHMTVIFFLPQI*AFPCWE Trigger: TTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAA...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CAA 90 bp | AGGTTGGTGGAAGAGGAGCATTTCAGAACATTGCTGCTGCATTTCTaGGCTGCTGTTACCTCTAAAAATGCTGACTTTAGTTCTTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: RLVEEEHFRTLLLHF*AAVTSKNADFSSLR Trigger: TCTTAAAGAACTAAAGTCAGCATTTTTAGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTCCACCAACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CCA 72 bp | GGAAGCCCGGTTCTTACACAACTACACTTTCCTACCTaGCAACCAAGAGTCTCTGCTACTCCGTGTGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: GSPVLTQLHFPT*QPRVSATPCVK Trigger: CTTAACACACGGAGTAGCAGAGACTCTTGGTTGCCAGGTAGGAAAGTGTAGTTGTGTAAGAACCGGGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR GCA 72 bp | CCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATaGATTACACAACTGTTGCCCTTGGACTGGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: PSKDPFIMWVSI*ITQLLPLDWQP Trigger: TGGTTGCCAGTCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148759.2 |
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| 3UTR GCA 72 bp | CTCCCAGGTTGGTGGAAGAGGAGCATTTCAGAACATTaGTGCTGCATTTCTTGGCTGCTGTTACCTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: LPGWWKRSISEH*CCISWLLLPLK Trigger: TTTTAGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTCCACCAACCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR GCA 72 bp | CCAGGTTGGTGGAAGAGGAGCATTTCAGAACATTGCTaGTGCATTTCTTGGCTGCTGTTACCTCTAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: PGWWKRSISEHC*CISWLLLPLKM Trigger: CATTTTTAGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTCCACCAACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CCA 72 bp | TTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTaGGTGAGCATATGCATTACACAACTGTTGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: FLVVPSKDPFIM*VSICITQLLPL Trigger: CAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| 3UTR GCA 72 bp | CCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATaGATTACACAACTGTTGCCCTTGGACTTTAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PSKDPFIMWVSI*ITQLLPLDFKK Trigger: TTTCTTAAAGTCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CCA 72 bp | TTATTGGGTACTGAAGTCTCACAATTTCCTCTAGGTTaGACTCTGGGAACAATTAACCCTTCTTACCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLGTEVSQFPLG*TLGTINPSYPK Trigger: TTTGGGGTAAGAAGGGTTAATTGTTCCCAGAGTCCAACCTAGAGGAAATTGTGAGACTTCAGTACCCAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR-3UTR CAA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGATGAGCCTTTCCTTGTaGGGAAGCTTTCACCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: CMSCQMPKANFCEIFKEMMSLSL*GSFHPG Trigger: TCCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCAT...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR TCA 72 bp | TGGCTGAAAGAATCCCAGTTCACTTGTGATACAAGATaGATGCATGATGTATGTGCACCTTTGTTTAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: WLKESQFTCDTR*MHDVCAPLFRG Trigger: ACCTCTAAACAAAGGTGCACATACATCATGCATTCATCTTGTATCACAAGTGAACTGGGATTCTTTCAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR GCA 72 bp | TGTATTAGAAGTTCTTGGTGTAGAGAAATTGGTATGTaGTGTTTGTTACCTAGGGTGTATGTCCTGTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: CIRSSWCREIGM*CLLPRVYVLSN Trigger: ATTTGACAGGACATACACCCTAGGTAACAAACAGCACATACCAATTTCTCTACACCAAGAACTTCTAATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR TCA 72 bp | TTGTTTGAAAGAATGCCTACTCATACAGTAACTTACTaGTATTGGCTGAAAGAATCCCAGTTCACTTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: LFERMPTHTVTY*YWLKESQFTCD Trigger: ATCACAAGTGAACTGGGATTCTTTCAGCCAATATCAGTAAGTTACTGTATGAGTAGGCATTCTTTCAAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTGCTCCTCTACGTAAGTaGAGGAGACGTGCCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFAPLRK*RRRARC Trigger: GCACCGGGCACGTCTCCTCCACTTACGTAGAGGAGC...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | GGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAACTGTTGCCCTTGGACCTCGGTCGTCCCATTaGCGGTCTTCGTTAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GSFHHVGEHMHYTTVALGPRSSH*RSSLRV Trigger: TACCCTTAACGAAGACCGGCAATGGGACGACCGAGG...TCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AACCCTTCTTACCCCAAATATGAGCCTTTCCTTGTTGGGAAGCTTTCACCCAGGCTTGCTGGTGTTGTCTaGCTCACTACAGACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: NPSYPKYEPFLVGKLSPRLAGVV*LTTDLL Trigger: CAGTAAGTCTGTAGTGAGTCAGACAACACCAGCAAG...CCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | GGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATAGCAGCTGATCTGACTTaGAAGTCATCCATGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GIFLVVPSKDPFIMWVSIAADLT*KSSMPI Trigger: AATGGGCATGGATGACTTGCAAGTCAGATCAGCTGC...TATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | TGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATACATCATCATCACTCTaGTGGGCTTCCTGCATCACA | + |
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Preference number: 4 (lower is better) Translates to: WNLPSCAFQGSFHHVGEHTSSSL*WASCIT Trigger: TGTGATGCAGGAAGCCCAGCAGAGTGATGATGATGT...ATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AACCCTTCTTACCCCAAATATGAGCCTTTCCTTGTTGGGAAGCTTTCACCCAGGCAGCCAGCTTTTTCTTaGAAACTTAGAGCCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: NPSYPKYEPFLVGKLSPRQPAFS*KLRARS Trigger: TGATCTGGCTCTAAGTTTTCAAGAAAAAGCTGGCTG...CCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAAGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACACTGTGTGACTTCTACTaGTGGGTCCTTACCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTLCDFY*WVLTLN Trigger: GTTCAAGGTAAGGACCCATCAGTAGAAGTCACACAG...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACATCTCTTCAAGTTTACTaGGTTCACATGCGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTSLQVY*VHMRAG Trigger: ACCTGCCCGCATGTGAACTCAGTAAACTTGAAGAGA...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AACCCTTCTTACCCCAAATATGAGCCTTTCCTTGTTGGGAAGCTTTCACCCAGGATCCCACGACATCCATaGTACACTCATCAGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: NPSYPKYEPFLVGKLSPRIPRHP*YTHQKT Trigger: TGTTTTCTGATGAGTGTATCATGGATGTCGTGGGAT...CCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTTTTGAAGCCACCAGATaGTGCCCTTTTGGGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFFEATR*CPFGKV Trigger: AACCTTCCCAAAAGGGCATCATCTGGTGGCTTCAAA...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACACTTGCTGGTGTTGTCTaGCTCACTACAGACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTLAGVV*LTTDLL Trigger: CAGTAAGTCTGTAGTGAGTCAGACAACACCAGCAAG...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR CCA 90 bp | GGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATCATCATCACTCTGCTaGGCTTCCTGCATCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: GIFLVVPSKDPFIMWVSISSSLC*ASCITN Trigger: ATTTGTGATGCAGGAAGCCCAGCAGAGTGATGATGA...TATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGGCAGCGACATCCCCTTaGGCTCCTCTACGTAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CMSCQMPKANFCEIFKEMAATSP*APLRKW Trigger: CCACTTACGTAGAGGAGCTCAAGGGGATGTCGCTGC...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | TACTGTGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGCTATGTCTTTTTGGCTaGGCCAAAGCAGGATCATAT | + |
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Preference number: 4 (lower is better) Translates to: YCGIFLVVPSKDPFIMWVLCLFG*AKAGSY Trigger: ATATGATCCTGCTTTGGCTCAGCCAAAAAGACATAG...CACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCACAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTCTCGCATTTGTCTTCTaGCGTATTGGTCAAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFLAFVF*RIGQKW Trigger: CCACTTTTGACCAATACGTCAGAAGACAAATGCGAG...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTAGGCTTTTGCATCTCTaGGAAATCGGTTACTACGCA | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFRLLHL*EIGYYA Trigger: TGCGTAGTAACCGATTTCGCAGAGATGCAAAAGCCT...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | TGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATTTCTCTATGTCTTTTTaGCTGAGCCAAAGCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: WNLPSCAFQGSFHHVGEHFSMSF*LSQSRI Trigger: GATCCTGCTTTGGCTCAGCCAAAAAGACATAGAGAA...ATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | TACTGTGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGGTAGCACTGGGGGAATaGGAGAAAGTAAATTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: YCGIFLVVPSKDPFIMWVVALGE*EKVNLK Trigger: CTTCAAATTTACTTTCTCCCATTCCCCCAGTGCTAC...CACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCACAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR CCA 90 bp | TGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATCACATTAGAACTTGCTaGTGTTGTCTGACTCACTAC | + |
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Preference number: 4 (lower is better) Translates to: WNLPSCAFQGSFHHVGEHHIRTC*CCLTHY Trigger: GTAGTGAGTCAGACAACACCAGCAAGTTCTAATGTG...ATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR TCA 90 bp | CTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACATATATCTGTAGCAGCTaGTCTGACTTGCAAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: LVVPSKDPFIMWVSICITYICSS*SDLQVI Trigger: GATGACTTGCAAGTCAGATCAGCTGCTACAGATATA...TGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | CTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACATCTTTTCCTAGGGGATaGTTCTTCTTCCTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVVPSKDPFIMWVSICITSFPRG*FFFLIF Trigger: GAAGATGAGGAAGAAGAATCATCCCCTAGGAAAAGA...TGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR TCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACATCTTTTCCTAGGGGATaGTTCTTCTTCCTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTSFPRG*FFFLIF Trigger: GAAGATGAGGAAGAAGAATCATCCCCTAGGAAAAGA...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAGCATTTCAGAACATTGCTGCTGCATTTCTTGGCTGCTGTTACCTCTAACTTCTCATCTTCCTaGAGCATGCTGACTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: EEEHFRTLLLHFLAAVTSNFSSS*SMLTIS Trigger: TGAAATAGTCAGCATGCTGCAGGAAGATGAGAAGTT...AGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | GGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAACTGTTGCCCTTGGACTTGCAAGTCATCCATaGCCATTACAATTTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSFHHVGEHMHYTTVALGLASHP*PLQFQE Trigger: CTCTTGAAATTGTAATGGGCATGGATGACTTGCAAG...TCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | TGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATAACTGGTGTTATGACTaGCTTTCCTTCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: WNLPSCAFQGSFHHVGEHNWCYD*LSFFII Trigger: GATGATGAAGAAGGAAAGGCAGTCATAACACCAGTT...ATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTGTAGCACTGGGGGAATaGGAGAAAGTAAATTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFVALGE*EKVNLK Trigger: CTTCAAATTTACTTTCTCCCATTCCCCCAGTGCTAC...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACACACATTAGAACTTGCTaGTGTTGTCTGACTCACTAC | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTHIRTC*CCLTHY Trigger: GTAGTGAGTCAGACAACACCAGCAAGTTCTAATGTG...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR TCA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACATTTCAACTGGTGTTATaGCTGCCTTTCCTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTFQLVL*LPFLLH Trigger: ATGAAGAAGGAAAGGCAGTCATAACACCAGTTGAAA...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | TACTGTGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGGTTCTCACAAGCTTaGAATAGCTGTAGTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: YCGIFLVVPSKDPFIMWVRFSQA*NSCSSF Trigger: AAAACTACTACAGCTATTCCAAGCTTGTGAGAACCT...CACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | TACTGTGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGACTACGCAATATAGATaGTACACTGTTCAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YCGIFLVVPSKDPFIMWVTTQYR*YTVQFL Trigger: CAGAAACTGAACAGTGTACCATCTATATTGCGTAGT...CACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCACAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGAGAAGTCCCATTAACTaGACAGCACCTCCGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CMSCQMPKANFCEIFKEMRSPIN*TAPPSS Trigger: TGAGCTCGGAGGTGCTGTTCAGTTAATGGGACTTCT...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CCA 90 bp | ATCACCCTCTTGTCTGTGGAAGAGCTTCCTAGGCTGCATATGACTGTGATATTTTACAATTTCAAGAGCTaGAAGAATTCCCAATTTTGC | + |
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Preference number: 4 (lower is better) Translates to: ITLLSVEELPRLHMTVIFYNFKS*KNSQFC Trigger: GCAAAATTGGGAATTCTTCCAGCTCTTGAAATTGTA...AAATATCACAGTCATATGCAGCCTAGGAAGCTCTTCCACAGACAAGAGGGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CAA 72 bp | TTAACCCTTCTTACCCCAAATATGAGCCTTTCCTTGTaGGGAAGCTTTCACCCAGGATCTAATTATCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LTLLTPNMSLSL*GSFHPGSNYHS Trigger: AGAATGATAATTAGATCCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAAGGGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CAA 72 bp | AGAAGTTCTTGGTGTAGAGAAATTGGTATGTGCTGTTaGTTACCTAGGGTGTATGTCCTGTCAAATGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSSWCREIGMCC*LPRVYVLSNAK Trigger: TTTGGCATTTGACAGGACATACACCCTAGGTAACAAACAGCACATACCAATTTCTCTACACCAAGAACTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR TCA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGTCAAAAGTGGAGCAGTaGGAACATGCATACAATGGT | + |
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Preference number: 4 (lower is better) Translates to: CMSCQMPKANFCEIFKEMSKVEQ*EHAYNG Trigger: ACCATTGTATGCATGTTCTCACTGCTCCACTTTTGA...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CAA 72 bp | GCAGATATTAAGTGCCACTTAACTCAGCACCATTCTTaGTTGGTCTTTATATATTTACCAGCAGCTCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: ADIKCHLTQHHS*LVFIYLPAALR Trigger: TCTAAGAGCTGCTGGTAAATATATAAAGACCAACAAAGAATGGTGCTGAGTTAAGTGGCACTTAATATCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| 3UTR CAA 72 bp | GATATTAAGTGCCACTTAACTCAGCACCATTCTTTGTaGGTCTTTATATATTTACCAGCAGCTCTTAGAACA | + |
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Preference number: 4 (lower is better) Translates to: DIKCHLTQHHSL*VFIYLPAALRT Trigger: TGTTCTAAGAGCTGCTGGTAAATATATAAAGACCAACAAAGAATGGTGCTGAGTTAAGTGGCACTTAATATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR GCA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGCTGCTGTTTCTGATATaGAGTGTTTGGATTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: CMSCQMPKANFCEIFKEMLLFLI*SVWIYL Trigger: AAGATAAATCCAAACACTGCATATCAGAAACAGCAG...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | TACTGTGGAATCTTCCTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGGCCAGGCTTGTAGTTTaGGAAGAGGCCACATTAGAA | + |
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Preference number: 5 (lower is better) Translates to: YCGIFLVVPSKDPFIMWVARLVV*EEATLE Trigger: TTCTAATGTGGCCTCTTCCAAAACTACAAGCCTGGC...CACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAGGAAGATTCCACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGGAGCATTTCAGAACATTGCTGCTGCATTTCTTGGCTGCTGTTACCTCTTGGGAGAAAGTAAATTaGAAGCCACCAGATGATGCC | + |
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Preference number: 5 (lower is better) Translates to: EEEHFRTLLLHFLAAVTSWEKVN*KPPDDA Trigger: GGCATCATCTGGTGGCTTCAAATTTACTTTCTCCCA...AGAGGTAACAGCAGCCAAGAAATGCAGCAGCAATGTTCTGAAATGCTCCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAGCCAGGCTTGTAGTTTaGGAAGAGGCCACATTAGAA | + |
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Preference number: 5 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTARLVV*EEATLE Trigger: TTCTAATGTGGCCTCTTCCAAAACTACAAGCCTGGC...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR CAA 90 bp | AACCCTTCTTACCCCAAATATGAGCCTTTCCTTGTTGGGAAGCTTTCACCCAGGCCAGAAAAGTGTGCTTaGAATTCATCAACACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: NPSYPKYEPFLVGKLSPRPEKCA*NSSTPR Trigger: TCTTGGTGTTGATGAATTCAAAGCACACTTTTCTGG...CCTGGGTGAAAGCTTCCCAACAAGGAAAGGCTCATATTTGGGGTAAGAAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACACCAGATGATGCCCTTTaGGGAAGGTTTTCTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTPDDAL*GRFSLS Trigger: AGACAAAGAAAACCTTCCCAAAAGGGCATCATCTGG...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | AGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACACATGGGAGAAAGTAAATTaGAAGCCACCAGATGATGCC | + |
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Preference number: 5 (lower is better) Translates to: SCAFQGSFHHVGEHMHYTWEKVN*KPPDDA Trigger: GGCATCATCTGGTGGCTTCAAATTTACTTTCTCCCA...TGTGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS CCA 90 bp | GACTTACTGTTTGTACTGTTTGTTCCATTAGTAGCACTGGGGGAATaGGAGAAAGTAAATTTGAAGCCACCAGATGATGCCCTTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: DLLFVLFVPLVALGE*EKVNLKPPDDALLG Trigger: TCCCAAAAGGGCATCATCTGGTGGCTTCAAATTTACTTTCTCCCATTCCCCCAGTGCTACTAATGGAACAAACAGTACAAACAGTAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS CCA 90 bp | TGTAGCCAGGCTTGTAGTTTTGGAAGAGGCCACATTAGAACTTGCTaGTGTTGTCTGACTCACTACAGACTTACTGTTTGTACTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: CSQACSFGRGHIRTC*CCLTHYRLTVCTVC Trigger: ACAAACAGTACAAACAGTAAGTCTGTAGTGAGTCAGACAACACCAGCAAGTTCTAATGTGGCCTCTTCCAAAACTACAAGCCTGGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS-3UTR CAA 90 bp | GGATCCTTTCATCATGTGGGTGAGCATATGCATTACACAACTGTTGCCCTTGGAAAGCAGCTGTGCTGTTaGATAATTATCAGGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GSFHHVGEHMHYTTVALGKQLCC*IIIRAN Trigger: ATTTGCCCTGATAATTATCAAACAGCACAGCTGCTT...TCCAAGGGCAACAGTTGTGTAATGCATATGCTCACCCACATGATGAAAGGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | CTAGTTGTGCCTTCCAAGGATCCTTTCATCATGTGGGTGAGCATATGCATTACATGTTTGGATTTATCTTaGACTCTAAGAGTAGCGATC | + |
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Preference number: 5 (lower is better) Translates to: LVVPSKDPFIMWVSICITCLDLS*TLRVAI Trigger: GATCGCTACTCTTAGAGTCAAAGATAAATCCAAACA...TGTAATGCATATGCTCACCCACATGATGAAAGGATCCTTGGAAGGCACAACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS-3UTR CAA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGCCTCTTCTAAGGCTTTaGCATCTCTGCGAAATCGGT | + |
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Preference number: 5 (lower is better) Translates to: CMSCQMPKANFCEIFKEMPLLRL*HLCEIG Trigger: ACCGATTTCGCAGAGATGCAAAAGCCTTAGAAGAGG...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS TCA 90 bp | ATCTCTTCAAGTTTACTGAGTTCACATGCGGGCAGGTCAATTAGATaGCTAGTTTCTGGCATTTCTTCAAATCGTTCTTCTTCAGATTCA | + |
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Preference number: 5 (lower is better) Translates to: ISSSLLSSHAGRSIR*LVSGISSNRSSSDS Trigger: TGAATCTGAAGAAGAACGATTTGAAGAAATGCCAGAAACTAGTCATCTAATTGACCTGCCCGCATGTGAACTCAGTAAACTTGAAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020755.12 ENSMUST00000102856.9 ENSMUST00000156280.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTCCTGTCAAATGCCAAAGGCTAACTTCTGTGAAATCTTTAAAGAAATGTTGTCTTCTGACGTATaGGTCAAAAGTGGAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: CMSCQMPKANFCEIFKEMLSSDV*VKSGAV Trigger: CACTGCTCCACTTTTGACCAATACGTCAGAAGACAA...CATTTCTTTAAAGATTTCACAGAAGTTAGCCTTTGGCATTTGACAGGACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020755.12 |
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| CDS TCA 72 bp | TACCAAGCCAACCAAATTTCCCTTTGTGGCTGTCACTaGTGTAGCCAGGCTTGTAGTTTTGGAAGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: YQANQISLCGCH*CSQACSFGRGH Trigger: GTGGCCTCTTCCAAAACTACAAGCCTGGCTACATCAGTGACAGCCACAAAGGGAAATTTGGTTGGCTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS GCA 72 bp | ATAAGAAGTACATCATCATCACTCTGCTGGGCTTCCTaGATCACAAATTCTCGGACCATGGACGGACTAAAC | + |
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Preference number: 6 (lower is better) Translates to: IRSTSSSLCWAS*ITNSRTMDGLN Trigger: GTTTAGTCCGTCCATGGTCCGAGAATTTGTGATGCAGGAAGCCCAGCAGAGTGATGATGATGTACTTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000102856.9 |
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| CDS GCA 72 bp | ATCACCACATTAATAAGAAGTACATCATCATCACTCTaGTGGGCTTCCTGCATCACAAATTCTCGGACCATG | + |
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Preference number: 6 (lower is better) Translates to: ITTLIRSTSSSL*WASCITNSRTM Trigger: CATGGTCCGAGAATTTGTGATGCAGGAAGCCCAGCAGAGTGATGATGATGTACTTCTTATTAATGTGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000102856.9 |
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| CDS CCA 72 bp | GCTTGTAGTTTTGGAAGAGGCCACATTAGAACTTGCTaGTGTTGTCTGACTCACTACAGACTTACTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ACSFGRGHIRTC*CCLTHYRLTVC Trigger: ACAAACAGTAAGTCTGTAGTGAGTCAGACAACACCAGCAAGTTCTAATGTGGCCTCTTCCAAAACTACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000148759.2 |
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| CDS TCA 72 bp | AGTTTACTGAGTTCACATGCGGGCAGGTCAATTAGATaGCTAGTTTCTGGCATTTCTTCAAATCGTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLLSSHAGRSIR*LVSGISSNRSS Trigger: AGAAGAACGATTTGAAGAAATGCCAGAAACTAGTCATCTAATTGACCTGCCCGCATGTGAACTCAGTAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020755.12 ENSMUST00000102856.9 ENSMUST00000156280.2 |
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| CDS CAA 72 bp | GTTGTGTTAGATCCAAGCATATTATCTTTCTCGCATTaGTCTTCTGACGTATTGGTCAAAAGTGGAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVLDPSILSFSH*SSDVLVKSGAV Trigger: CACTGCTCCACTTTTGACCAATACGTCAGAAGACAAATGCGAGAAAGATAATATGCTTGGATCTAACACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020755.12 ENSMUST00000102856.9 |
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