Pregenerated sensors for PPP4R3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041846Ensembl transcript IDs: ENSMUST00000048305.10, ENSMUST00000163095.9, ENSMUST00000223091.2, ENSMUST00000223459.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCTAACTaGACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATG | + |
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Preference number: 1 (lower is better) Translates to: CGPSWRAHRLMSSPN*TASPPPAPLNWHLM Trigger: CATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAGTTAGGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR TCA 90 bp | GCTCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTaGTCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTG | + |
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Preference number: 1 (lower is better) Translates to: APLNWHLMSRSPVWC*SGSVIHKRPLHFDV Trigger: CACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR TCA 90 bp | GAGACACCACAGCTTCTCCATCTTCCATGTCATCTTCATCTGTGTTaGACCACATCTCTTCTTCGTCTTCTAGTGTTCTGGCATCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: ETPQLLHLPCHLHLC*TTSLLRLLVFWHLV Trigger: GACGAGATGCCAGAACACTAGAAGACGAAGAAGAGATGTGGTTCAACACAGATGAAGATGACATGGAAGATGGAGAAGCTGTGGTGTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR GCA 90 bp | TTGTATTTTGGTTTCTTTGGAGATCATGGAAGTGGCTCGTTAAATTaGCAATTTGTTATTAATCAAGTCCTTCATGAGCAGGTAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LYFGFFGDHGSGSLN*QFVINQVLHEQVAR Trigger: CCTGGCTACCTGCTCATGAAGGACTTGATTAATAACAAATTGGCAATTTAACGAGCCACTTCCATGATCTCCAAAGAAACCAAAATACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGGAGACCACTGCACTTTaGTGTGGATTTTGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRETTAL*CGFCRG Trigger: CCCCCTACAAAATCCACATCAAAGTGCAGTGGTCTC...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTAGTCCAGTGTGGTGCTaGTCTGGGTCAGTCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: LRKGQCVVQAGELTGLCLSPVWC*SGSVIH Trigger: GTGAATGACTGACCCAGATCAGCACCACACTGGACT...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTGGCATCCCCTCCTCCTaGTCCATTGAATTGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LRKGQCVVQAGELTGLCLGIPSS*SIELAL Trigger: AAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCC...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCAGTGTGGTGCTGATCTaGGTCAGTCATTCACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: EKGNVWSKLESSQAYVFPSVVLI*VSHSQE Trigger: CTCTTGTGAATGACTGACCCAGATCAGCACCACACT...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR CAA 90 bp | GGAGACACCACAGCTTCTCCATCTTCCATGTCATCTTCATCTGTGTaGAACCACATCTCTTCTTCGTCTTCTAGTGTTCTGGCATCTCGT | + |
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Preference number: 2 (lower is better) Translates to: GDTTASPSSMSSSSV*NHISSSSSSVLASR Trigger: ACGAGATGCCAGAACACTAGAAGACGAAGAAGAGATGTGGTTCAACACAGATGAAGATGACATGGAAGATGGAGAAGCTGTGGTGTCTCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCTTCACAAGAGACCACTaGACTTTGATGTGGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSFTRDH*TLMWIL Trigger: CAAAATCCACATCAAAGTGCAGTGGTCTCTTGTGAA...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR TCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAGTCCAGTGTGGTGCTaGTCTGGGTCAGTCATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LMVPNIYIQQLIIHPGGESPVWC*SGSVIH Trigger: GTGAATGACTGACCCAGATCAGCACCACACTGGACT...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAGAGACCACTGCACTTTaGTGTGGATTTTGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GPKYIYSTTNHTPRGREKETTAL*CGFCRG Trigger: CCCCCTACAAAATCCACATCAAAGTGCAGTGGTCTC...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACATTAAGAAAACTCAGCCTACACCTTTACAGTCAGCAATTCAGCCACATCGCATGCTATCAAGTTTaGGGTTGTCTTGCCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LTLRKLSLHLYSQQFSHIACYQV*GCLAFL Trigger: GAGAAAGGCAAGACAACCCCAAACTTGATAGCATGC...GATGTGGCTGAATTGCTGACTGTAAAGGTGTAGGCTGAGTTTTCTTAATGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR CAA 90 bp | GCCTACACCTTTACAGTCAGCAATTCAGCCACATCCTGTGAATCTTaGAATTATTGTCTACTTGGAGTAGCGACTAATCATTTCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: AYTFTVSNSATSCES*NYCLLGVATNHFLK Trigger: CTTGAGGAAATGATTAGTCGCTACTCCAAGTAGACAATAATTCAAAGATTCACAGGATGTGGCTGAATTGCTGACTGTAAAGGTGTAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGCGGAGTTCATCAGATTGTAACGAGATCCGTTGTTGAGAAATGCTTTGACGTATTTTGGTTTCTTTaGAGATCATGGAAGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: YGGVHQIVTRSVVEKCFDVFWFL*RSWKWL Trigger: GAGCCACTTCCATGATCTCCAAAGAAACCAAAATAC...GTCAAAGCATTTCTCAACAACGGATCTCGTTACAATCTGATGAACTCCGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAGATACTTTATTCTaGCCCTCCCCCACAAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LMVPNIYIQQLIIHPGGEKDTLF*PSPTKV Trigger: AACCTTTGTGGGGGAGGGGCAGAATAAAGTATCTTT...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAATTCACAAGAGACCACTaGACTTTGATGTGGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GPKYIYSTTNHTPRGREKFTRDH*TLMWIL Trigger: CAAAATCCACATCAAAGTGCAGTGGTCTCTTGTGAA...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR GCA 90 bp | TACACCTTTACAGTCAGCAATTCAGCCACATCCTGTGAATCTTTGAATTATTGTTCCGTTGTTGAGAAATaGTTTGACTACAGGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: YTFTVSNSATSCESLNYCSVVEK*FDYRFK Trigger: TTTGAACCTGTAGTCAAAGCATTTCTCAACAACGGA...ACAATAATTCAAAGATTCACAGGATGTGGCTGAATTGCTGACTGTAAAGGTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CCA 90 bp | TACACCTTTACAGTCAGCAATTCAGCCACATCCTGTGAATCTTTGAATTATTGTTTTCTTTGGAGATCATaGAAGTGGCTCGTTAAATTG | + |
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Preference number: 2 (lower is better) Translates to: YTFTVSNSATSCESLNYCFLWRS*KWLVKL Trigger: CAATTTAACGAGCCACTTCCATGATCTCCAAAGAAA...ACAATAATTCAAAGATTCACAGGATGTGGCTGAATTGCTGACTGTAAAGGTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCACATCCTGTGAATCTTTGAATTATTGTCTACTTGGAGTAGCGACTAATCAAACATTTCTATTATaGCGGAGTTCATCAGATTGT | + |
|
Preference number: 2 (lower is better) Translates to: SATSCESLNYCLLGVATNQTFLL*RSSSDC Trigger: ACAATCTGATGAACTCCGCCATAATAGAAATGTTTG...ATTAGTCGCTACTCCAAGTAGACAATAATTCAAAGATTCACAGGATGTGGCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR GCA 72 bp | AGCTGGAGAGCTCACAGGCTTATGTCTTCCCCTAACTaGACGGCATCCCCTCCTCCTGCTCCATTGAATTGG | + |
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Preference number: 3 (lower is better) Translates to: SWRAHRLMSSPN*TASPPPAPLNW Trigger: CCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAGTTAGGGGAAGACATAAGCCTGTGAGCTCTCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCTCCTCCTGCTCCATaGAATTGGCACTTGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSPPPAP*NWHLMS Trigger: GCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGG...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR TCA 72 bp | AATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTaGTCTGGGTCAGTCATTCACAAGAGACCACTGCAC | + |
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Preference number: 3 (lower is better) Translates to: NWHLMSRSPVWC*SGSVIHKRPLH Trigger: GTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCGGTAAAGAACCAGTTTaGTCAACAGGTACTGATGAT | + |
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Preference number: 3 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSGKEPV*STGTDD Trigger: ATCATCAGTACCTGTTGACAAAACTGGTTCTTTACC...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR-3UTR CAA 90 bp | TATGGCGGAGTTCATCAGATTGTAACGAGATCCGTTGTTGAGAAATGCTTTGACTGTATTTTGGTTTCTTaGGAGATCATGGAAGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: YGGVHQIVTRSVVEKCFDCILVS*EIMEVA Trigger: AGCCACTTCCATGATCTCCAAAGAAACCAAAATACA...GTCAAAGCATTTCTCAACAACGGATCTCGTTACAATCTGATGAACTCCGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCACATCCTGTGAATCTTTGAATTATTGTCTACTTGGAGTAGCGACTAATGAGCCTCACTTTCCCTaGCTCTTTGTTTCAACATAC | + |
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Preference number: 3 (lower is better) Translates to: SATSCESLNYCLLGVATNEPHFP*LFVSTY Trigger: GTATGTTGAAACAAAGAGCAAGGGAAAGTGAGGCTC...ATTAGTCGCTACTCCAAGTAGACAATAATTCAAAGATTCACAGGATGTGGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACATTAAGAAAACTCAGCCTACACCTTTACAGTCAGCAATTCAGCCACATCGTCTTGCCTTTCTCTTaGCTGTTCAAACCTCAATTT | + |
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Preference number: 3 (lower is better) Translates to: LTLRKLSLHLYSQQFSHIVLPFS*LFKPQF Trigger: AAATTGAGGTTTGAACAGCAAAGAGAAAGGCAAGAC...GATGTGGCTGAATTGCTGACTGTAAAGGTGTAGGCTGAGTTTTCTTAATGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CAA 90 bp | TACACCTTTACAGTCAGCAATTCAGCCACATCCTGTGAATCTTTGAATTATTGTCTATCAAGTTTGGGGTaGTCTTGCCTTTCTCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: YTFTVSNSATSCESLNYCLSSLG*SCLSLC Trigger: GCAAAGAGAAAGGCAAGACAACCCCAAACTTGATAG...ACAATAATTCAAAGATTCACAGGATGTGGCTGAATTGCTGACTGTAAAGGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCACATCCTGTGAATCTTTGAATTATTGTCTACTTGGAGTAGCGACTAATTCACATCGTCTTCGGTaGGCAAGATTAAATATTGTG | + |
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Preference number: 3 (lower is better) Translates to: SATSCESLNYCLLGVATNSHRLR*ARLNIV Trigger: CACAATATTTAATCTTGCCAACCGAAGACGATGTGA...ATTAGTCGCTACTCCAAGTAGACAATAATTCAAAGATTCACAGGATGTGGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR GCA 72 bp | GGTTTCTTTGGAGATCATGGAAGTGGCTCGTTAAATTaGCAATTTGTTATTAATCAAGTCCTTCATGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GFFGDHGSGSLN*QFVINQVLHEQ Trigger: CTGCTCATGAAGGACTTGATTAATAACAAATTGGCAATTTAACGAGCCACTTCCATGATCTCCAAAGAAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAGGTAAAGAACCAGTTTaGTCAACAGGTACTGATGAT | + |
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Preference number: 3 (lower is better) Translates to: GPKYIYSTTNHTPRGREKGKEPV*STGTDD Trigger: ATCATCAGTACCTGTTGACAAAACTGGTTCTTTACC...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCCGTCGCTCTCCGCCCTaGCGAGCAGGGACATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPRRSPP*RAGTCP Trigger: AGGGCATGTCCCTGCTCGTCAGGGCGGAGAGCGACG...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR GCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCCCCCGGTCGTCCCACTaGCGGTCCTCGTTGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPPRSSH*RSSLSV Trigger: CACGCTCAACGAGGACCGGCAGTGGGACGACCGGGG...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | ATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGCGTCGCTCTCCGCCCTaGCGAGCAGGGACATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IPSSCSIELALDEQKSSVRRSPP*RAGTCP Trigger: AGGGCATGTCCCTGCTCGTCAGGGCGGAGAGCGACG...CACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR GCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGCCCCGGTCGTCCCACTaGCGGTCCTCGTTGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWPRSSH*RSSLSV Trigger: CACGCTCAACGAGGACCGGCAGTGGGACGACCGGGG...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| 3UTR CAA 72 bp | TCCCCTAACTGCACGGCATCCCCTCCTCCTGCTCCATaGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SPNCTASPPPAP*NWHLMSRSPVW Trigger: CCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAGTTAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR GCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCGCCCATAAGTTGGACTaGCCCTCCAAGCTCGGGATC | + |
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Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSAHKLD*PSKLGI Trigger: GATCCCGAGCTTGGAGGGGCAGTCCAACTTATGGGC...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGCAGGCCCATAAGTTaGACTGCCCCTCCAAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVSRPIS*TAPPSS Trigger: CGAGCTTGGAGGGGCAGTCCAACTTATGGGCCTGCT...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCCTGAGTGATGTCCACTaGAGGGTCCTTTCCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPLSDVH*RVLSLN Trigger: GTTCAAGGAAAGGACCCTTCAGTGGACATCACTCAG...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGCAGGCTTGTTGCGGATaGCTGGCTGGTGAGGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWQACCG*LAGEVS Trigger: ACTAACCTCACCAGCCAGTCATCCGCAACAAGCCTG...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR CCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGCTTGTTGCGGATGACTaGCTGGTGAGGTTAGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKLVADD*LVRLVF Trigger: AAAGACTAACCTCACCAGCCAGTCATCCGCAACAAG...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCGTTTTCTTCGAAGACTaGAGGGGTAGGGAGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPVFFED*RGRENH Trigger: ATGGTTCTCCCTACCCCTTCAGTCTTCGAAGAAAAC...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGGTTGTGCCTCCTGCATaGCAAACTCTCGTACCATGG | + |
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Preference number: 4 (lower is better) Translates to: LDEQKSSVVLIWVSHSQEVVPPA*QTLVPW Trigger: CCATGGTACGAGAGTTTGTCATGCAGGAGGCACAAC...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGGTTGTGCCTCCTGCATaGCAAACTCTCGTACCATGG | + |
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Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWVVPPA*QTLVPW Trigger: CCATGGTACGAGAGTTTGTCATGCAGGAGGCACAAC...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR TCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCCTAGTAAGGGAGCAGTaGGAACATGCATACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPLVREQ*EHAYSA Trigger: AGCACTGTATGCATGTTCTCACTGCTCCCTTACTAG...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTGTAATAGCTGCCGTCTaGGATGTACTCTTAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EVQCGADLGQSFTRDHCTVIAAV*DVLLGT Trigger: CGTCCCTAAGAGTACATCTCAGACGGCAGCTATTAC...AGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCTTCTGTTGTGCCTCCTaGATGACAAACTCTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPFCCAS*MTNSRT Trigger: GGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAA...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGCATCCATGCCAAGGATaGCTTCTAAAGCTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKHPCQG*LLKLVI Trigger: TATTACCAGCTTTAGAAGTCATCCTTGGCATGGATG...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCTGGACAAGGAAAGTTTaGAACTTGGGCTCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSWTRKV*NLGSVV Trigger: GACGACAGAGCCCAAGTTTCAAACTTTCCTTGTCCA...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCGTAATAGCTGCCGTCTaGGATGTACTCTTAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVVIAAV*DVLLGT Trigger: CGTCCCTAAGAGTACATCTCAGACGGCAGCTATTAC...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTGTTGCGGATGACTaGCTGGTGAGGTTAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRLVADD*LVRLVF Trigger: AAAGACTAACCTCACCAGCCAGTCATCCGCAACAAG...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCATCCAGCTTTTTCTTaGAAGCTAAGGGCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSHPAFS*KLRAKS Trigger: TGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATG...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGATTCCAAGCATCCAATaGCGTCCATTATACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKIPSIQ*RPLYIP Trigger: AGGAATGTATAATGGACGTCATTGGATGCTTGGAAT...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGGTTTTCTTCGAAGACTaGAGGGGTAGGGAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDEQKSSVVLIWVSHSQEVFFED*RGRENH Trigger: ATGGTTCTCCCTACCCCTTCAGTCTTCGAAGAAAAC...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGCTAGTAAGGGAGCAGTaGGAACATGCATACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDEQKSSVVLIWVSHSQELVREQ*EHAYSA Trigger: AGCACTGTATGCATGTTCTCACTGCTCCCTTACTAG...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTTTCTGTTGTGCCTCCTaGATGACAAACTCTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRKGQCVVQAGELTGLCLFCCAS*MTNSRT Trigger: GGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAA...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGCATGCTATCAAGTTTaGGGTTGTCTTGCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSSCSIELALDEQKSSVACYQV*GCLAFL Trigger: GAGAAAGGCAAGACAACCCCAAACTTGATAGCATGC...CACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGCTTCGTTTTGTCAGATaGAGACACCACAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDEQKSSVVLIWVSHSQELRFVR*RHHSFS Trigger: GGAGAAGCTGTGGTGTCTCCATCTGACAAAACGAAG...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTGGAAAGTTTGAAACTTaGGCTCTGTCGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVQCGADLGQSFTRDHCTGKFET*ALSSRK Trigger: CTTTCTGGACGACAGAGCCCAAGTTTCAAACTTTCC...AGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGGGAAAGTTTGAAACTTaGGCTCTGTCGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRGKFET*ALSSRK Trigger: CTTTCTGGACGACAGAGCCCAAGTTTCAAACTTTCC...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCCATCCAGCTTTTTCTTaGAAGCTAAGGGCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVHPAFS*KLRAKS Trigger: TGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATG...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGATATTCAACCAAGTATaGGAATATATCCGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKIFNQV*EYIRSS Trigger: GCTGCTACGGATATATTCTCATACTTGGTTGAATAT...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGTCCGTTGTTGAGAAATaGTTTGACTACAGGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKSVVEK*FDYRFK Trigger: TTTGAACCTGTAGTCAAAGCATTTCTCAACAACGGA...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCTTTGTGGTAATAGCTaGCGTCTGAGATGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSLCGNS*RLRCTL Trigger: AAGAGTACATCTCAGACGGCAGCTATTACCACAAAG...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCTGTTTTATTGGCAGTaGCTAGCATGTTCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRKGQCVVQAGELTGLCLLFYWQ*LACSLG Trigger: ACCCAGAGAACATGCTAGCCACTGCCAATAAAACAG...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGGCATGCTATCAAGTTTaGGGTTGTCTTGCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWACYQV*GCLAFL Trigger: GAGAAAGGCAAGACAACCCCAAACTTGATAGCATGC...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGATTTCATATAAGTGGTaGAGTCCTTCAATGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHGIPSSCSIELALDEQKISYKW*SPSMFS Trigger: GGAAAACATTGAAGGACTGCACCACTTATATGAAAT...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCATCATCATTCTGTTGTaGCTCCTGCATGACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVIIILL*LLHDKL Trigger: GAGTTTGTCATGCAGGAGGCACAACAGAATGATGAT...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTATCATCATTCTGTTGTaGCTCCTGCATGACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRKGQCVVQAGELTGLCLIIILL*LLHDKL Trigger: GAGTTTGTCATGCAGGAGGCACAACAGAATGATGAT...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGGCCCATAAGTTGGACTaGCCCTCCAAGCTCGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSLYTKKLLAFFTSEELWAHKLD*PSKLGI Trigger: GATCCCGAGCTTGGAGGGGCAGTCCAACTTATGGGC...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAATGCCAAGAAAGCATaGTTGGAGGCCATAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVNAKKA*LEAIRT Trigger: AGTTCTTATGGCCTCCAAGCATGCTTTCTTGGCATT...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCTCCGTTGTTGAGAAATaGTTTGACTACAGGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKGNVWSKLESSQAYVFPSVVEK*FDYRFK Trigger: TTTGAACCTGTAGTCAAAGCATTTCTCAACAACGGA...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCATTCCAAGCATCCAATaGCGTCCATTATACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIELALDEQKSSVVLIWVIPSIQ*RPLYIP Trigger: AGGAATGTATAATGGACGTCATTGGATGCTTGGAAT...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCTTTCAGCTCAGGATCTaGTATGGGAATTACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSFQLRI*YGNYFF Trigger: AAAGAAGTAATTCCCATATCAGATCCTGAGCTGAAA...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAAGCAGGCCCATAAGTTaGACTGCCCCTCCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPKYIYSTTNHTPRGREKSRPIS*TAPPSS Trigger: CGAGCTTGGAGGGGCAGTCCAACTTATGGGCCTGCT...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGTCTTTTCTGTTTTATTaGCAGTGGCTAGCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRSFLFY*QWLACS Trigger: AGAACATGCTAGCCACTGCCAATAAAACAGAAAAGA...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCTCTTTTCTGTTTTATTaGCAGTGGCTAGCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSSFLFY*QWLACS Trigger: AGAACATGCTAGCCACTGCCAATAAAACAGAAAAGA...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGATATTCAACCAAGTATaGGAATATATCCGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWIFNQV*EYIRSS Trigger: GCTGCTACGGATATATTCTCATACTTGGTTGAATAT...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCAGGCTTGTTGCGGATaGCTGGCTGGTGAGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGEQACCG*LAGEVS Trigger: ACTAACCTCACCAGCCAGTCATCCGCAACAAGCCTG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGCTCTCGTACCATGGATaGATTATATTCAACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGADLGQSFTRDHCTLMWLSYHG*IIFNQV Trigger: TACTTGGTTGAATATAATCCATCCATGGTACGAGAG...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | CTTACATTAAGAAAACTCAGCCTACACCTTTACAGTCAGCAATTCAGCCACATCCTAGTAAGGGAGCAGTaGGAACATGCATACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRKLSLHLYSQQFSHILVREQ*EHAYSA Trigger: AGCACTGTATGCATGTTCTCACTGCTCCCTTACTAG...GATGTGGCTGAATTGCTGACTGTAAAGGTGTAGGCTGAGTTTTCTTAATGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
||
| 3UTR CAA 72 bp | ACAGCTTCTCCATCTTCCATGTCATCTTCATCTGTGTaGAACCACATCTCTTCTTCGTCTTCTAGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TASPSSMSSSSV*NHISSSSSSVL Trigger: CAGAACACTAGAAGACGAAGAAGAGATGTGGTTCAACACAGATGAAGATGACATGGAAGATGGAGAAGCTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGTGGACAAGGAAAGTTTaGAACTTGGGCTCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLYTKKLLAFFTSEELWWTRKV*NLGSVV Trigger: GACGACAGAGCCCAAGTTTCAAACTTTCCTTGTCCA...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCTTCGTTTTGTCAGATaGAGACACCACAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGELRFVR*RHHSFS Trigger: GGAGAAGCTGTGGTGTCTCCATCTGACAAAACGAAG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCTATTATGGCGGAGTTCATCAGATTGTAACGAGATCCGTTGTTGAGAAAAATGCCAAGAAAGCATaGTTGGAGGCCATAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HFYYGGVHQIVTRSVVEKNAKKA*LEAIRT Trigger: AGTTCTTATGGCCTCCAAGCATGCTTTCTTGGCATT...TTTCTCAACAACGGATCTCGTTACAATCTGATGAACTCCGCCATAATAGAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
||
| CDS-3UTR TCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCATCCATGCCAAGGATaGCTTCTAAAGCTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGEHPCQG*LLKLVI Trigger: TATTACCAGCTTTAGAAGTCATCCTTGGCATGGATG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAATGCCAAGAAAGCATaGTTGGAGGCCATAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGENAKKA*LEAIRT Trigger: AGTTCTTATGGCCTCCAAGCATGCTTTCTTGGCATT...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCTTTGTGGTAATAGCTaGCGTCTGAGATGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGELCGNS*RLRCTL Trigger: AAGAGTACATCTCAGACGGCAGCTATTACCACAAAG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGTTTCAGCTCAGGATCTaGTATGGGAATTACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLYTKKLLAFFTSEELWFQLRI*YGNYFF Trigger: AAAGAAGTAATTCCCATATCAGATCCTGAGCTGAAA...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGATTTCATATAAGTGGTaGAGTCCTTCAATGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLYTKKLLAFFTSEELWISYKW*SPSMFS Trigger: GGAAAACATTGAAGGACTGCACCACTTATATGAAAT...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAACTCTCGTACCATGGATaGATTATATTCAACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPKYIYSTTNHTPRGREKLSYHG*IIFNQV Trigger: TACTTGGTTGAATATAATCCATCCATGGTACGAGAG...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAACTAAAGCTGGTAATATaGCCATATTTGACAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPKYIYSTTNHTPRGREKLKLVI*PYLTKS Trigger: AGACTTTGTCAAATATGGGCATATTACCAGCTTTAG...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CCA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCAAACATTTCTATTATaGCGGAGTTCATCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMVPNIYIQQLIIHPGGEQTFLL*RSSSDC Trigger: ACAATCTGATGAACTCCGCCATAATAGAAATGTTTG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS TCA 90 bp | TCTACCAGACCCACGAGTCCTCCCTTTGTGGTAATAGCTGCCGTCTaGGATGTACTCTTAGGGACGGATCCAGGAGAGCCCGGAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STRPTSPPFVVIAAV*DVLLGTDPGEPGEP Trigger: GGGCTCTCCGGGCTCTCCTGGATCCGTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTCGTGGGTCTGGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGAAGCAGGCCCATAAGTaGGACTGCCCCTCCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPSSCSIELALDEQKKQAHK*DCPSKL Trigger: GAGCTTGGAGGGGCAGTCCAACTTATGGGCCTGCTT...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCGAGAACCAGGCAGGCTaGTTGCGGATGACTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EKRAMCGPSWRAHRLMSSENQAG*LRMTGW Trigger: CCAGCCAGTCATCCGCAACAAGCCTGCCTGGTTCTC...GGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS GCA 90 bp | AGGATAATCTACCAGACCCACGAGTCCTCCCTTTGTGGTAATAGCTaGCGTCTGAGATGTACTCTTAGGGACGGATCCAGGAGAGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RIIYQTHESSLCGNS*RLRCTLRDGSRRAR Trigger: CCGGGCTCTCCTGGATCCGTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTCGTGGGTCTGGTAGATTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGGCCAAGAAAGCATGCTaGGAGGCCATAAGAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPSSCSIELALDEQKAKKAC*EAIRTS Trigger: GCTAGTTCTTATGGCCTCCAAGCATGCTTTCTTGGC...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGGCATCCAGCTTTTTCTaGAAAGCTAAGGGCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPSSCSIELALDEQKASSFF*KAKGQV Trigger: GACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGC...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGCTATCAAGTTTGGGGTaGTCTTGCCTTTCTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPSSCSIELALDEQKLSSLG*SCLSLC Trigger: GCAAAGAGAAAGGCAAGACAACCCCAAACTTGATAG...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTGCCAAGAAAGCATGCTaGGAGGCCATAAGAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRKGQCVVQAGELTGLCLAKKAC*EAIRTS Trigger: GCTAGTTCTTATGGCCTCCAAGCATGCTTTCTTGGC...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACGGCATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGTACATCATCATTCTGTaGTGCCTCCTGCATGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPSSCSIELALDEQKYIIIL*CLLHDK Trigger: TTTGTCATGCAGGAGGCACAACAGAATGATGATGTA...CTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGATGCCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGCTGGACAAGGAAAGTTaGAAACTTGGGCTCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LDEQKSSVVLIWVSHSQELDKES*KLGLCR Trigger: ACGACAGAGCCCAAGTTTCAAACTTTCCTTGTCCAG...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGGTGGTTGTGATAAAGTaGGGTCATATTCCAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRVVVIK*GHIPSI Trigger: GATGCTTGGAATATGACCCAACTTTATCACAACCAC...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTGTCTTTTCTGTTTTATaGGCAGTGGCTAGCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVQCGADLGQSFTRDHCTVFSVL*AVASMF Trigger: GAACATGCTAGCCACTGCCAATAAAACAGAAAAGAC...AGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGCTATCAAGTTTGGGGTaGTCTTGCCTTTCTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CGADLGQSFTRDHCTLMWLSSLG*SCLSLC Trigger: GCAAAGAGAAAGGCAAGACAACCCCAAACTTGATAG...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS-3UTR CAA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTTCGTCATTCTTCGTTTaGTCAGATGGAGACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRKGQCVVQAGELTGLCLSSFFV*SDGDTT Trigger: TGTGGTGTCTCCATCTGACAAAACGAAGAATGACGA...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | TCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCTCGTCATTCTTCGTTTaGTCAGATGGAGACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SIELALDEQKSSVVLIWVSSFFV*SDGDTT Trigger: TGTGGTGTCTCCATCTGACAAAACGAAGAATGACGA...GACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGGGTAGTGTGTCTTCCTaGTCTTCATCCTCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LDEQKSSVVLIWVSHSQEGSVSS*SSSSSS Trigger: TGATGATGAGGATGAAGACAAGGAAGACACACTACC...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTAATCAGAGTATCCTGTaGTTTCTGGTATGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVQCGADLGQSFTRDHCTNQSIL*FLVCSV Trigger: AACACTGCATACCAGAAACAACAGGATACTCTGATT...AGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTCCCCAGGGAGAACCATATCTaGTATATACTGAACTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EKGNVWSKLESSQAYVFPRENHI*YILNSV Trigger: TACAGAGTTCAGTATATACAAGATATGGTTCTCCCT...GGGGAAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTATCATCATCATTCTGTaGTGCCTCCTGCATGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRKGQCVVQAGELTGLCLIIIIL*CLLHDK Trigger: TTTGTCATGCAGGAGGCACAACAGAATGATGATGAT...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048305.10 |
||
| CDS-3UTR CAA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGAAGCAGGCCCATAAGTaGGACTGCCCCTCCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLYTKKLLAFFTSEELWKQAHK*DCPSKL Trigger: GAGCTTGGAGGGGCAGTCCAACTTATGGGCCTGCTT...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTAATCAGAGTATCCTGTaGTTTCTGGTATGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRKGQCVVQAGELTGLCLNQSIL*FLVCSV Trigger: AACACTGCATACCAGAAACAACAGGATACTCTGATT...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGTCATCTTTACTAGGCTaGTCTTCTGTTGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISFPEKRAMCGPSWRAHRSSLLG*SSVVFA Trigger: AGCAAATACAACAGAAGACAAGCCTAGTAAAGATGA...CCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAGGGAAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTTGATGAGCAGAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGGTCTTGCCTTTCTCTTaGCTGTTCAAACCTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LDEQKSSVVLIWVSHSQEVLPFS*LFKPQF Trigger: AAATTGAGGTTTGAACAGCAAAGAGAAAGGCAAGAC...CTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTCTGCTCATCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTCCTCCTGCTCCATTGAATTGGCACTTGATGAGCAGAAGTCCAGTGTGCAAATTTTGCTTTCTTaGACACTGGTAGTGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPSSCSIELALDEQKSSVQILLS*TLVVCL Trigger: AAGACACACTACCAGTGTCAAAGAAAGCAAAATTTG...CACACTGGACTTCTGCTCATCAAGTGCCAATTCAATGGAGCAGGAGGAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCAGTGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTCAAATTTTGCTTTCTTaGACACTGGTAGTGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EVQCGADLGQSFTRDHCTQILLS*TLVVCL Trigger: AAGACACACTACCAGTGTCAAAGAAAGCAAAATTTG...AGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACACTGGACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGGGCAATGTGTGGTCCAAGCTGGAGAGCTCACAGGCTTATGTCTTAGGGAGAACCATATCTaGTATATACTGAACTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRKGQCVVQAGELTGLCLRENHI*YILNSV Trigger: TACAGAGTTCAGTATATACAAGATATGGTTCTCCCT...AAGACATAAGCCTGTGAGCTCTCCAGCTTGGACCACACATTGCCCTTTTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTGATCTGGGTCAGTCATTCACAAGAGACCACTGCACTTTGATGTGGTCATCTTTACTAGGCTaGTCTTCTGTTGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CGADLGQSFTRDHCTLMWSSLLG*SSVVFA Trigger: AGCAAATACAACAGAAGACAAGCCTAGTAAAGATGA...CCACATCAAAGTGCAGTGGTCTCTTGTGAATGACTGACCCAGATCAGCACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GGCTCGTTAAATTGCCAATTTGTTATTAATCAAGTCCTTCATGAGCAGGTAGCCGCCAAGAAAGCATGCTaGGAGGCCATAAGAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLNCQFVINQVLHEQVAAKKAC*EAIRTS Trigger: GCTAGTTCTTATGGCCTCCAAGCATGCTTTCTTGGC...GGCTACCTGCTCATGAAGGACTTGATTAATAACAAATTGGCAATTTAACGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
||
| CDS GCA 90 bp | ATGATTTTTCTCTTAAAACGGAGGGCACATAATGCCAAGAAAGCATaGTTGGAGGCCATAAGAACTAGCACTCTGCGAAGAATGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MIFLLKRRAHNAKKA*LEAIRTSTLRRMSL Trigger: CAAGGACATTCTTCGCAGAGTGCTAGTTCTTATGGCCTCCAAGCATGCTTTCTTGGCATTATGTGCCCTCCGTTTTAAGAGAAAAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS GCA 90 bp | GCATCCAGCTTTTTCTTGAAAGCTAAGGGCCAAGTCATAATTTTCTaGTTCAGACCACACAATCAGAGTATCCTGTTGTTTCTGGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSFFLKAKGQVIIF*FRPHNQSILLFLVC Trigger: GCATACCAGAAACAACAGGATACTCTGATTGTGTGGTCTGAAGCAGAAAATTATGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCTCTTTATACAAAGAAACTGCTGGCATTCTTTACTAGTGAGGAACTATGGGCATCCAGCTTTTTCTaGAAAGCTAAGGGCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLYTKKLLAFFTSEELWASSFF*KAKGQV Trigger: GACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGC...CCATAGTTCCTCACTAGTAAAGAATGCCAGCAGTTTCTTTGTATAAAGAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | TTAATGGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGCTGGACAAGGAAAGTTaGAAACTTGGGCTCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LMVPNIYIQQLIIHPGGELDKES*KLGLCR Trigger: ACGACAGAGCCCAAGTTTCAAACTTTCCTTGTCCAG...CTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACCATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAGGTAGTGTGTCTTCCTaGTCTTCATCCTCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GPKYIYSTTNHTPRGREKGSVSS*SSSSSS Trigger: TGATGATGAGGATGAAGACAAGGAAGACACACTACC...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS TCA 90 bp | CTGTTAACTTCTTACTTACATCATCATTCTGTTGTGCCTCCTGCATaGCAAACTCTCGTACCATGGATGGATTATATTCAACCAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LLTSYLHHHSVVPPA*QTLVPWMDYIQPSM Trigger: CATACTTGGTTGAATATAATCCATCCATGGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGTAAGTAAGAAGTTAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAGTCTTTTCTGTTTTATaGGCAGTGGCTAGCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPKYIYSTTNHTPRGREKVFSVL*AVASMF Trigger: GAACATGCTAGCCACTGCCAATAAAACAGAAAAGAC...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS-3UTR CAA 90 bp | CATTTCTATTATGGCGGAGTTCATCAGATTGTAACGAGATCCGTTGTTGAGAAATCATCTTTACTAGGCTaGTCTTCTGTTGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFYYGGVHQIVTRSVVEKSSLLG*SSVVFA Trigger: AGCAAATACAACAGAAGACAAGCCTAGTAAAGATGA...TTTCTCAACAACGGATCTCGTTACAATCTGATGAACTCCGCCATAATAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223091.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAAATATATATATTCAACAACTAATCATACACCCAGGGGGAGAGAAAAAGTCTTGCCTTTCTCTTaGCTGTTCAAACCTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: GPKYIYSTTNHTPRGREKVLPFS*LFKPQF Trigger: AAATTGAGGTTTGAACAGCAAAGAGAAAGGCAAGAC...TTTTTCTCTCCCCCTGGGTGTATGATTAGTTGTTGAATATATATATTTGGGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
||
| CDS TCA 72 bp | CCCACGAGTCCTCCCTTTGTGGTAATAGCTGCCGTCTaGGATGTACTCTTAGGGACGGATCCAGGAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTSPPFVVIAAV*DVLLGTDPGEP Trigger: GGGCTCTCCTGGATCCGTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTCGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS GCA 72 bp | TACCAGACCCACGAGTCCTCCCTTTGTGGTAATAGCTaGCGTCTGAGATGTACTCTTAGGGACGGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: YQTHESSLCGNS*RLRCTLRDGSR Trigger: CCTGGATCCGTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTCGTGGGTCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS CCA 72 bp | TCTGGGTCAACTAAAGTTCGAAGCAGGCCCATAAGTTaGACTGCCCCTCCAAGCTCGGGATCTGTATCACAA | + |
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Preference number: 6 (lower is better) Translates to: SGSTKVRSRPIS*TAPPSSGSVSQ Trigger: TTGTGATACAGATCCCGAGCTTGGAGGGGCAGTCCAACTTATGGGCCTGCTTCGAACTTTAGTTGACCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS GCA 72 bp | CTCTTAAAACGGAGGGCACATAATGCCAAGAAAGCATaGTTGGAGGCCATAAGAACTAGCACTCTGCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LLKRRAHNAKKA*LEAIRTSTLRR Trigger: TCTTCGCAGAGTGCTAGTTCTTATGGCCTCCAAGCATGCTTTCTTGGCATTATGTGCCCTCCGTTTTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS CAA 72 bp | GTGAGGTTAGTCTTTGTCCCACTGGACAAGGAAAGTTaGAAACTTGGGCTCTGTCGTCCAGAAAGATTAGTT | + |
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Preference number: 6 (lower is better) Translates to: VRLVFVPLDKES*KLGLCRPERLV Trigger: AACTAATCTTTCTGGACGACAGAGCCCAAGTTTCAAACTTTCCTTGTCCAGTGGGACAAAGACTAACCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 ENSMUST00000223459.2 |
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| CDS TCA 72 bp | CTCTCGTACCATGGATGGATTATATTCAACCAAGTATaGGAATATATCCGTAGCAGCACTTCGCACCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSYHGWIIFNQV*EYIRSSTSHLC Trigger: ACACAGGTGCGAAGTGCTGCTACGGATATATTCTCATACTTGGTTGAATATAATCCATCCATGGTACGAGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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| CDS TCA 72 bp | TCTTACTTACATCATCATTCTGTTGTGCCTCCTGCATaGCAAACTCTCGTACCATGGATGGATTATATTCAA | + |
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Preference number: 6 (lower is better) Translates to: SYLHHHSVVPPA*QTLVPWMDYIQ Trigger: TTGAATATAATCCATCCATGGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGTAAGTAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163095.9 |
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| CDS CAA 72 bp | AATTTTGCTTTCTTTGACACTGGTAGTGTGTCTTCCTaGTCTTCATCCTCATCATCATCTTCATCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: NFAFFDTGSVSS*SSSSSSSSSSS Trigger: TGATGATGATGAAGATGATGATGAGGATGAAGACAAGGAAGACACACTACCAGTGTCAAAGAAAGCAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048305.10 ENSMUST00000163095.9 |
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