Pregenerated sensors for PPP4R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061950Ensembl transcript IDs: ENSMUST00000073104.11, ENSMUST00000159646.8, ENSMUST00000160664.8, ENSMUST00000161127.8, ENSMUST00000161324.8, ENSMUST00000162109.8, ENSMUST00000162272.2
Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGAGTGGTGCAGGCAGTCGAGGCCAGGCTCTTGCGGATGCAGGATaGACACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PSGAGSRGQALADAG*TPWVSRWRKLCSLH Trigger: ATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGCATCCGCAAGAGCCTGGCCTCGACTGCCTGCACCACTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTaGCAGGAGGAAGGCCCCCACCACAGCTGTCCCGAGTGGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: KPLVLGVGNLHLRMS*QEEGPHHSCPEWCR Trigger: CCTGCACCACTCGGGACAGCTGTGGTGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR GCA 90 bp | ACGCTAGGGTCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTaGCAAGAGTCAGGGCCACACCCGGCAGACTGTATGCACAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: TLGSRKSPSSSASSV*QESGPHPADCMHSA Trigger: AGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGACCCTAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR TCA 90 bp | ACCTCCATGGACATAATCAGGAGTGGCCTCCGCATTCCTCACACTTaGGTCCAGACAATGCCACAGCCCTCCGCAGCATGGCCTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: TSMDIIRSGLRIPHT*VQTMPQPSAAWPQV Trigger: GACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTGTCTGGACTCAAGTGTGAGGAATGCGGAGGCCACTCCTGATTATGTCCATGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR GCA 90 bp | TGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATGCACAGTaGTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGAAGGGTCG | + |
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Preference number: 1 (lower is better) Translates to: CLPRVRATPGRLYAQ*LAISVSTVCAREGS Trigger: CGACCCTTCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | GGCCAGGCTCTTGCGGATGCAGGATGGACACCGTGGGTCAGTAGGTaGAGGAAGCTGTGCTCATTGCATCTTCAGAGAGTTTGGTACTGG | + |
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Preference number: 1 (lower is better) Translates to: GQALADAGWTPWVSR*RKLCSLHLQRVWYW Trigger: CCAGTACCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGCATCCGCAAGAGCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR GCA 90 bp | CCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATaGACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: PVLSAKSQGHTRQTV*TVLSDLSVNCLCSR Trigger: TCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | GAGTCCAGACAATGCCACAGCCCTCCGCAGCATGGCCTCAAGTCCTaGTCTTCTGCTCAGAGTACTGTGTTGCTTGCTGCAGTGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: ESRQCHSPPQHGLKS*SSAQSTVLLAAVKW Trigger: CCATTTCACTGCAGCAAGCAACACAGTACTCTGAGCAGAAGACCAGGACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTGTCTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR GCA 90 bp | CAGGATGGACACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATTaGATCTTCAGAGAGTTTGGTACTGGAGGGGTGAATGCTTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: QDGHRGSVGGGSCAH*IFREFGTGGVNACK Trigger: TTTGCAAGCATTCACCCCTCCAGTACCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | CACTCTAACATTGGGAACCCTGTCATTTGCCAAGGTCAGCAAATGTaGCATCAAGTGCACAGCAAACTGGTCCATGGGGAGGCAGTCGTC | + |
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Preference number: 1 (lower is better) Translates to: HSNIGNPVICQGQQM*HQVHSKLVHGEAVV Trigger: GACGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTTGATGCCACATTTGCTGACCTTGGCAAATGACAGGGTTCCCAATGTTAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR GCA 90 bp | TTGGGAACCCTGTCATTTGCCAAGGTCAGCAAATGTGGCATCAAGTaGACAGCAAACTGGTCCATGGGGAGGCAGTCGTCTTCAATGACA | + |
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Preference number: 1 (lower is better) Translates to: LGTLSFAKVSKCGIK*TANWSMGRQSSSMT Trigger: TGTCATTGAAGACGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTTGATGCCACATTTGCTGACCTTGGCAAATGACAGGGTTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | TCATTTGCCAAGGTCAGCAAATGTGGCATCAAGTGCACAGCAAACTaGTCCATGGGGAGGCAGTCGTCTTCAATGACAGTCTGGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: SFAKVSKCGIKCTAN*SMGRQSSSMTVWQT Trigger: TGTCTGCCAGACTGTCATTGAAGACGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTTGATGCCACATTTGCTGACCTTGGCAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR TCA 90 bp | GTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTaGTCCAGTAACGCTTGTGGTACAACATCCTGGACTTTGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VSTVCAREGSVIDKY*SSNACGTTSWTLGL Trigger: GAGACCCAAAGTCCAGGATGTTGTACCACAAGCGTTACTGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR GCA 90 bp | GCTCATTGCATCTTCAGAGAGTTTGGTACTGGAGGGGTGAATGCTTaGAAAGTACTTGACATCACTGTCTCGGTCCATCTGCAGGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: AHCIFREFGTGGVNA*KVLDITVSVHLQGH Trigger: ATGGCCCTGCAGATGGACCGAGACAGTGATGTCAAGTACTTTGCAAGCATTCACCCCTCCAGTACCAAACTCTCTGAAGATGCAATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR TCA 90 bp | GAAGCTGTGCTCATTGCATCTTCAGAGAGTTTGGTACTGGAGGGGTaGATGCTTGCAAAGTACTTGACATCACTGTCTCGGTCCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: EAVLIASSESLVLEG*MLAKYLTSLSRSIC Trigger: GCAGATGGACCGAGACAGTGATGTCAAGTACTTTGCAAGCATTCACCCCTCCAGTACCAAACTCTCTGAAGATGCAATGAGCACAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | GACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCATTTTaGACACCTGCCAAAATTCTCTACCAGCTCATTGATGAGATCTAC | + |
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Preference number: 1 (lower is better) Translates to: DSLADKDKGLPTRPF*TPAKILYQLIDEIY Trigger: GTAGATCTCATCAATGAGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR GCA 90 bp | CTCTACCAGCTCATTGATGAGATCTACTCCGAAGGTTGGTGGTGTTaGTGTGTGGAGTTTCTTCACCATTTCACTGACCAACTTGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LYQLIDEIYSEGWWC*CVEFLHHFTDQLVG Trigger: TCCTACAAGTTGGTCAGTGAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | GCCAAAATTCTCTACCAGCTCATTGATGAGATCTACTCCGAAGGTTaGTGGTGTTGCTGTGTGGAGTTTCTTCACCATTTCACTGACCAA | + |
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Preference number: 1 (lower is better) Translates to: AKILYQLIDEIYSEG*WCCCVEFLHHFTDQ Trigger: TTGGTCAGTGAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAGAATTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CCA 90 bp | AAAATTCTCTACCAGCTCATTGATGAGATCTACTCCGAAGGTTGGTaGTGTTGCTGTGTGGAGTTTCTTCACCATTTCACTGACCAACTT | + |
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Preference number: 1 (lower is better) Translates to: KILYQLIDEIYSEGW*CCCVEFLHHFTDQL Trigger: AAGTTGGTCAGTGAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CAA 90 bp | AAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTaGGCAGGAGGAAGGCCCCCACCACAGCTGTCCCGAGTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KTTGIGSRQPAPANE*AGGRPPPQLSRVVQ Trigger: CTGCACCACTCGGGACAGCTGTGGTGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCAACCTGCACCTGCGAATaGGTTGGCAGGAGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SRKSPSSSASSVCQESGPTCTCE*VGRRKA Trigger: GGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGT...TGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCCACAGCTGTCCCGAGTaGTGCAGGCAGTCGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TRQTVCTVLSDLSVNCLCHSCPE*CRQSRP Trigger: TGGCCTCGACTGCCTGCACCACTCGGGACAGCTGTG...GCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CAA 90 bp | CACCTCCATGGACATAATCAGGAGTGGCCTCCGCATTCCTCACACTaGAGTCCAGACAATGCCACAGCCCTCCGCAGCATGGCCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: HLHGHNQEWPPHSSH*SPDNATALRSMASS Trigger: ACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTGTCTGGACTCAAGTGTGAGGAATGCGGAGGCCACTCCTGATTATGTCCATGGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATGCATATCTTCATCCGGGCTaGAGCCATCACCAGGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: QCQFCLPRVRATPGRLYAYLHPG*SHHQGL Trigger: TAAGCCCTGGTGATGGCTTCAGCCCGGATGAAGATA...TGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCCAGCCCTCCGCAGCATaGCCTCAAGTCCTGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TRQTVCTVLSDLSVNCLCQPSAA*PQVLVF Trigger: GAAGACCAGGACTTGAGGCCATGCTGCGGAGGGCTG...GCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTTCGAGGCCAGGCTCTTaGGGATGCAGGATGGACACC | + |
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Preference number: 2 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFSRPGS*GCRMDT Trigger: GGTGTCCATCCTGCATCCGCAAGAGCCTGGCCTCGA...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGGGCAGCCAAGGAGCTaGACAGGCTCAGCACCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVGQPRS*TGSAPR Trigger: TCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCC...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCATCTCCTCAGCAGCGCTaGTCAAAGGCACACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SRKSPSSSASSVCQESGPSPQQR*SKAHKC Trigger: ACACTTGTGTGCCTTTGATCAGCGCTGCTGAGGAGA...TGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGCACAGCTGTCCCGAGTaGTGCAGGCAGTCGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FVIYTRQELFTLRAGLGRHSCPE*CRQSRP Trigger: TGGCCTCGACTGCCTGCACCACTCGGGACAGCTGTG...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR CAA 90 bp | GCAGGATGGACACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATaGCATCTTCAGAGAGTTTGGTACTGGAGGGGTGAATGCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: AGWTPWVSRWRKLCS*HLQRVWYWRGECLQ Trigger: TTGCAAGCATTCACCCCTCCAGTACCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGTCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCATATCTTCATCCGGGCTaGAGCCATCACCAGGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LGSRKSPSSSASSVCQESYLHPG*SHHQGL Trigger: TAAGCCCTGGTGATGGCTTCAGCCCGGATGAAGATA...TGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGACCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGTCGAGGCCAGGCTCTTaGGGATGCAGGATGGACACC | + |
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Preference number: 2 (lower is better) Translates to: TLKTTGIGSRQPAPANELSRPGS*GCRMDT Trigger: GGTGTCCATCCTGCATCCGCAAGAGCCTGGCCTCGA...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGCACAGCTGTCCCGAGTaGTGCAGGCAGTCGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWHSCPE*CRQSRP Trigger: TGGCCTCGACTGCCTGCACCACTCGGGACAGCTGTG...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGGATGGACACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATTGCATCCTGCAAGCTCATGGATaGAGAAGGCTAGAGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: MQDGHRGSVGGGSCAHCILQAHG*RRLESF Trigger: GAAGGACTCTAGCCTTCTCCATCCATGAGCTTGCAG...GATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACGCTTGTGGTACAACATCCTGGACTTTGGGTCTCCTATCTTCATCCGGGCCGCATTCCTCACACTTaGGTCCAGACAATGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: VTLVVQHPGLWVSYLHPGRIPHT*VQTMPQ Trigger: CTGTGGCATTGTCTGGACTCAAGTGTGAGGAATGCG...GCCCGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGTACCACAAGCGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTTTCGCAAGCAGCACTCTAACATTGGGAACCCTGTCATTTGCCAAGGTCAGCATGATTCAGGCTaGACACCCCAGAGTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QGFRKQHSNIGNPVICQGQHDSG*TPQSGH Trigger: GTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTG...ACCTTGGCAAATGACAGGGTTCCCAATGTTAGAGTGCTGCTTGCGAAAACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTGAGTACTGTGTTGCTTaGTGCAGTGAAATGGTCCGA | + |
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Preference number: 2 (lower is better) Translates to: GHTRQTVCTVLSDLSVNCEYCVA*CSEMVR Trigger: TCGGACCATTTCACTGCAGCAAGCAACACAGTACTC...ACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACAAGTCCTGGTCTTCTaGTCAGAGTACTGTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SRKSPSSSASSVCQESGPQVLVF*SEYCVA Trigger: AGCAACACAGTACTCTGAGCAGAAGACCAGGACTTG...TGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGGATGGACACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATTGCATCTTCCCGAAGGGAAAATaGTCTGCCAATTCAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: MQDGHRGSVGGGSCAHCIFPKGK*SANSSH Trigger: ATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAA...GATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | CCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTAGTCTGGAAGCTCACTaGCACACACTTCATCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PGRLYAQCLAISVSTVCASLEAH*HTLHLV Trigger: TACAAGATGAAGTGTGTGTCAGTGAGCTTCCAGACT...AGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR GCA 90 bp | TACCAGCTCATTGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGAGTGTCAACTGTCTGTaGTCGAGAAGGGTCGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: YQLIDEIYSEGWWCCCVESVNCL*SRRVGH Trigger: ATGACCGACCCTTCTCGAGCACAGACAGTTGACACT...CTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR CAA 90 bp | CGACCAGACCATTTTGGACACCTGCCAAAATTCTCTACCAGCTCATaGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RPDHFGHLPKFSTSS*MRSTPKVGGVAVWS Trigger: ACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTTCGAGGCCAGGCTCTTaGGGATGCAGGATGGACACC | + |
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Preference number: 2 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPSRPGS*GCRMDT Trigger: GGTGTCCATCCTGCATCCGCAAGAGCCTGGCCTCGA...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACACCTGCACCTGCGAATaGGTTGGCAGGAGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHTCTCE*VGRRKA Trigger: GGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGT...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGCATCAGTCAGGAAGATaGAGGAACGAGTTAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVHQSGR*RNELRL Trigger: AAGCCTTAACTCGTTCCTTCATCTTCCTGACTGATG...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGTTCCCGAAGGGAAAATaGTCTGCCAATTCAAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVFPKGK*SANSSH Trigger: ATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAA...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCATTGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGTTTCTTGTCCCCAAGGATCACTaGAAGCTCATGGATGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LIDEIYSEGWWCCCVEFLVPKDH*KLMDGE Trigger: TTCTCCATCCATGAGCTTGCAGTGATCCTTGGGGAC...AAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGAACAACATCCTGGACTTTaGGTCTCCTATCTTCATCCG | + |
|
Preference number: 2 (lower is better) Translates to: RLYAQCLAISVSTVCAREQHPGL*VSYLHP Trigger: CGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTG...TTCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGTTCCCGAAGGGAAAATaGTCTGCCAATTCAAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWFPKGK*SANSSH Trigger: ATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAA...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGAAGTAAAATCAGCTGTTCTGCCAGTTCAGCTCGAAAGCGCCAATTTCTAGAAGGGAAAATGCTCTaGCAATTCAAGCCATCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SRSKISCSASSARKRQFLEGKML*QFKPSV Trigger: GACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTC...TAGAAATTGGCGCTTTCGAGCTGAACTGGCAGAACAGCTGATTTTACTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGTATCAGGAGAGATTCTaGAAACATTCTGTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVYQERF*KHSVNV Trigger: CACATTTACAGAATGTTTGCAGAATCTCTCCTGATA...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGTTTCTTACAGATTCAGAGCGATaGGTCGTAGGTAATCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LIDEIYSEGWWCCCVEFLTDSER*VVGNHK Trigger: TTTATGATTACCTACGACCCATCGCTCTGAATCTGT...AAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCCATCAGTCAGGAAGATaGAGGAACGAGTTAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: EILQTFCKCVQQCAALGVHQSGR*RNELRL Trigger: AAGCCTTAACTCGTTCCTTCATCTTCCTGACTGATG...GACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGGAAGGGAAAATGCTCTaGCAATTCAAGCCATCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTEGKML*QFKPSV Trigger: GACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTC...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | TGGCAGGAGGAAGGCCCCCACCACAGCTGTCCCGAGTaGTGCAGGCAGTCGAGGCCAGGCTCTTGCGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: WQEEGPHHSCPE*CRQSRPGSCGC Trigger: GCATCCGCAAGAGCCTGGCCTCGACTGCCTGCACCACTCGGGACAGCTGTGGTGGGGGCCTTCCTCCTGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | GTGGCCTCCGCATTCCTCACACTTGAGTCCAGACAATaGCACAGCCCTCCGCAGCATGGCCTCAAGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VASAFLTLESRQ*HSPPQHGLKSW Trigger: CCAGGACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTGTCTGGACTCAAGTGTGAGGAATGCGGAGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| 3UTR CCA 72 bp | GTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTaGCAGGAGGAAGGCCCCCACCACAGCTGTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLGVGNLHLRMS*QEEGPHHSCPE Trigger: CTCGGGACAGCTGTGGTGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCAGCACCTGCGAATGAGTaGGCAGGAGGAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKSPSSSASSVCQESGPAPANE*AGGRPP Trigger: TGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGC...TGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | CAATGCCACAGCCCTCCGCAGCATGGCCTCAAGTCCTaGTCTTCTGCTCAGAGTACTGTGTTGCTTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QCHSPPQHGLKS*SSAQSTVLLAA Trigger: TGCAGCAAGCAACACAGTACTCTGAGCAGAAGACCAGGACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| 3UTR TCA 72 bp | CATCCTGGACTTTGGGTCTCCTATCTTCATCCGGGCTaGAGCCATCACCAGGGCTTACGTCTGCACCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPGLWVSYLHPG*SHHQGLRLHLH Trigger: ATGGAGGTGCAGACGTAAGCCCTGGTGATGGCTTCAGCCCGGATGAAGATAGGAGACCCAAAGTCCAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | CAGCCCTCCGCAGCATGGCCTCAAGTCCTGGTCTTCTaGTCAGAGTACTGTGTTGCTTGCTGCAGTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: QPSAAWPQVLVF*SEYCVACCSEM Trigger: CATTTCACTGCAGCAAGCAACACAGTACTCTGAGCAGAAGACCAGGACTTGAGGCCATGCTGCGGAGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| 3UTR GCA 72 bp | AGAGTCAGGGCCACACCCGGCAGACTGTATGCACAGTaGTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: RVRATPGRLYAQ*LAISVSTVCAR Trigger: TCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | TCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATaGACAGTGCTTAGCGATCTCAGTGTCAACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SAKSQGHTRQTV*TVLSDLSVNCL Trigger: CAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | CTTGCAAAGTACTTGACATCACTGTCTCGGTCCATCTaGAGGGCCATGATTGTCTGCTCCACGGCCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LAKYLTSLSRSI*RAMIVCSTASW Trigger: CCAGGAGGCCGTGGAGCAGACAATCATGGCCCTGCAGATGGACCGAGACAGTGATGTCAAGTACTTTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGGGCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAGCTCAGAGTACTGTGTaGCTTGCTGCAGTGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VRATPGRLYAQCLAISVSAQSTV*LAAVKW Trigger: CCATTTCACTGCAGCAAGCAACACAGTACTCTGAGC...TGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATGCAACAACATCCTGGACTTaGGGTCTCCTATCTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: QCQFCLPRVRATPGRLYATTSWT*GLLSSS Trigger: GGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGT...TGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | CTTGCGGATGCAGGATGGACACCGTGGGTCAGTAGGTaGAGGAAGCTGTGCTCATTGCATCTTCAGAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LADAGWTPWVSR*RKLCSLHLQRV Trigger: AACTCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTGTCCATCCTGCATCCGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | CTGTCATTTGCCAAGGTCAGCAAATGTGGCATCAAGTaGACAGCAAACTGGTCCATGGGGAGGCAGTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSFAKVSKCGIK*TANWSMGRQSS Trigger: AGACGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTTGATGCCACATTTGCTGACCTTGGCAAATGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | CACCGTGGGTCAGTAGGTGGAGGAAGCTGTGCTCATTaGATCTTCAGAGAGTTTGGTACTGGAGGGGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HRGSVGGGSCAH*IFREFGTGGVN Trigger: ATTCACCCCTCCAGTACCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCTACTGACCCACGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR TCA 72 bp | TTATTTGGAGCTTGTACCACAACAGTTCTAACAGCATaGTTCAGGCTGCACACCCCAGAGTGGTCACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFGACTTTVLTA*FRLHTPEWSQG Trigger: CCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCTCCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR TCA 72 bp | GTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTaGTCCAGTAACGCTTGTGGTACAACATCCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: VCAREGSVIDKY*SSNACGTTSWT Trigger: AGTCCAGGATGTTGTACCACAAGCGTTACTGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGCACCTGCGAATGAGTaGGCAGGAGGAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RKNSFVIYTRQELFTLRAAPANE*AGGRPP Trigger: TGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGC...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACGCACCTGCGAATGAGTaGGCAGGAGGAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHAPANE*AGGRPP Trigger: TGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGC...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | TCTGGGAACCTCATCCTTCCCGAAGGGAAAATGCTCTaGCAATTCAAGCCATCAGTCAGGAAGATGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGNLILPEGKML*QFKPSVRKMKE Trigger: TTCCTTCATCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGAGGTTCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | TCTTCAATGACAGTCTGGCAGACAAAGACAAAGGCTTaGCGACCAGACCATTTTGGACACCTGCCAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSMTVWQTKTKA*RPDHFGHLPKF Trigger: GAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR GCA 72 bp | ATCTTCAGAGAGTTTGGTACTGGAGGGGTGAATGCTTaGAAAGTACTTGACATCACTGTCTCGGTCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: IFREFGTGGVNA*KVLDITVSVHL Trigger: CAGATGGACCGAGACAGTGATGTCAAGTACTTTGCAAGCATTCACCCCTCCAGTACCAAACTCTCTGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | CTCTACCAGCTCATTGATGAGATCTACTCCGAAGGTTaGTGGTGTTGCTGTGTGGAGTTTCTTCACCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYQLIDEIYSEG*WCCCVEFLHHF Trigger: GAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | GCAGACAAAGACAAAGGCTTGCCGACCAGACCATTTTaGACACCTGCCAAAATTCTCTACCAGCTCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ADKDKGLPTRPF*TPAKILYQLID Trigger: ATCAATGAGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| 3UTR CCA 72 bp | TACCAGCTCATTGATGAGATCTACTCCGAAGGTTGGTaGTGTTGCTGTGTGGAGTTTCTTCACCATTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: YQLIDEIYSEGW*CCCVEFLHHFT Trigger: AGTGAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGCGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMREHPG*KLAGQP Trigger: CGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACG...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| 3UTR CAA 72 bp | GGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTaGGCAGGAGGAAGGCCCCCACCACAGCTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GIGSRQPAPANE*AGGRPPPQLSR Trigger: TCGGGACAGCTGTGGTGGGGGCCTTCCTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGCCTCTGGGGAGCTGGTaGCAGCGTCTGGCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVPLGSW*QRLAGT Trigger: CGTCCCGGCCAGACGCTGGCACCAGCTCCCCAGAGG...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGTGGAGTGAGGGGCACTaGGGTCTGAAGGAGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLVLGVGNLHLRMSWQEWSEGH*GLKERP Trigger: AGGACGCTCCTTCAGACCTCAGTGCCCCTCACTCCA...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGAGTGCCCAGGTGTCTTaGCAGCACAGCCTTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLVLGVGNLHLRMSWQESAQVS*QHSLRG Trigger: GCCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACT...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCATCTCCTGTTCTCTCTaGGCTGAGTCTCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVSLPQAVPVLSAKSQGISCSL*AESLLG Trigger: CCCGAGGAGAGACTCAGCCCAGAGAGAACAGGAGAT...GCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR CCA 90 bp | CAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGACGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVCTVLSDLSVNCLCSRREHPG*KLAGQP Trigger: CGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACG...TCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| 3UTR CAA 72 bp | GGACATAATCAGGAGTGGCCTCCGCATTCCTCACACTaGAGTCCAGACAATGCCACAGCCCTCCGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GHNQEWPPHSSH*SPDNATALRSM Trigger: CATGCTGCGGAGGGCTGTGGCATTGTCTGGACTCAAGTGTGAGGAATGCGGAGGCCACTCCTGATTATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTGGGCAGTCAGGTCTATaGGGACAGGGCACACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFGQSGL*GQGTPW Trigger: CCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCC...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTCCTCTGGGGAGCTGGTaGCAGCGTCTGGCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPPLGSW*QRLAGT Trigger: CGTCCCGGCCAGACGCTGGCACCAGCTCCCCAGAGG...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTACAGCTGGAAGAACCTaGGCAGCAACATTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQAVPVLSAKSQGHTRQTTAGRT*AATFLL Trigger: CAGAAGAAATGTTGCTGCCCAGGTTCTTCCAGCTGT...AGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATGGGCAGTCAGGTCTATaGGGACAGGGCACACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYGQSGL*GQGTPW Trigger: CCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCC...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | GTAACGCTTGTGGTACAACATCCTGGACTTTGGGTCTCCTATCTTCATCCGGGCAAAGGCCCCAGAGACTaGAAGGCTGCTTGGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VTLVVQHPGLWVSYLHPGKGPRD*KAAWRT Trigger: GGTTCGCCAAGCAGCCTTTCAGTCTCTGGGGCCTTT...GCCCGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGTACCACAAGCGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGGCACTGGCCCGAGCTTaGTGGATTAGCAAACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPLVLGVGNLHLRMSWQEALARA*WISKRG Trigger: TCCACGTTTGCTAATCCATCAAGCTCGGGCCAGTGC...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTCTCTTGACAAAACAGTaGAATGTGCGGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQAVPVLSAKSQGHTRQTLLTKQ*NVRHLF Trigger: GAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAG...AGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTACGTCACCTGCAGAGTaGCCAGGTGTCTTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFTSPAE*PGVLAA Trigger: TGCTGCCAAGACACCTGGGCACTCTGCAGGTGACGT...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACAGTGTCAACTGTCTGTaGTCGAGAAGGGTCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHSVNCL*SRRVGH Trigger: ATGACCGACCCTTCTCGAGCACAGACAGTTGACACT...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCACACTTGAGTCCAGACAATGCCACAGCCCTCCGCAGCATGGCCTCAAGTGAGTTGAACATGTCCTaGTCTAAGGGAGTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHLSPDNATALRSMASSELNMS*SKGVAS Trigger: AGAGGCCACTCCCTTAGACCAGGACATGTTCAACTC...ACTTGAGGCCATGCTGCGGAGGGCTGTGGCATTGTCTGGACTCAAGTGTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACGAGTTGAACATGTCCTaGTCTAAGGGAGTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHELNMS*SKGVAS Trigger: AGAGGCCACTCCCTTAGACCAGGACATGTTCAACTC...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACTGCCGAGGAGTCTTCTaGGTTCTTGCTCTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHCRGVF*VLALIF Trigger: AAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCA...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGCCATCTGCAGGGCCATaGTTGTCTGCTCCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELPSAGP*LSAPRP Trigger: AGGCCGTGGAGCAGACAATCATGGCCCTGCAGATGG...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGAAATGTGGCATCAAGTaGACAGCAAACTGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMKCGIK*TANWSM Trigger: CATGGACCAGTTTGCTGTGCACTTGATGCCACATTT...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACCAGCACGTCCACCTGTaGTGTCTTTGTCTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLAISVSTVCAREGSVIDQHVHL*CLCLLP Trigger: CGGCAGAAGACAAAGACAGCACAGGTGGACGTGCTG...GTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | GCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTCCTTCCCAACCATaGGGGCCATCTTGCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: ATPGRLYAQCLAISVSTVCPSQP*GPSCTL Trigger: TAATGTGCAAGATGGCCCCCATGGTTGGGAAGGACA...GACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGAAATATCTCCAAAATTaGCAGCGCAGACCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMKYLQN*QRRPSG Trigger: TCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTT...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPAREHPG*KLAGQP Trigger: CGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACG...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACCCGACCAGACCATTTTaGACACCTGCCAAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHPTRPF*TPAKIL Trigger: GAGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGG...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGAAAGGCCCCAGAGACTaGAAGGCTGCTTGGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELKGPRD*KAAWRT Trigger: GGTTCGCCAAGCAGCCTTTCAGTCTCTGGGGCCTTT...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGAGCGTCCTCTGGCCTaGGATGCTCTTCTTCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVERPLA*DALLLR Trigger: TCGTAGAAGAAGAGCATCGCAGGCCAGAGGACGCTC...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGACCATTTTGGACACCTaGCAAAATTCTCTACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMTILDT*QNSLPA Trigger: AGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATGGT...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCGGACAGGGCACACCTTaGTCTCCACGTCAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISGQGTP*SPRQIA Trigger: AGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCC...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACAAATATCTCCAAAATTaGCAGCGCAGACCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHKYLQN*QRRPSG Trigger: TCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTT...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCAGGGCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGGAGTCCTCCAGAAATaGAAGGAGTTGAACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSQGHTRQTVCTVLSDLSGVLQK*KELNMS Trigger: GGACATGTTCAACTCCTTCCATTTCTGGAGGACTCC...ACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGATCTCCTGTTCTCTCTaGGCTGAGTCTCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVISCSL*AESLLG Trigger: CCCGAGGAGAGACTCAGCCCAGAGAGAACAGGAGAT...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS-3UTR TCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGTTGGCGAACCCAACGTaGAGGATCACTGATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPLVLGVGNLHLRMSWQELANPT*RITDQV Trigger: AACTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGAAAGGCCCCAGAGACTaGAAGGCTGCTTGGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWKGPRD*KAAWRT Trigger: GGTTCGCCAAGCAGCCTTTCAGTCTCTGGGGCCTTT...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS-3UTR TCA 90 bp | TCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCAAGAAATGGAAGGAGTTaGACATGTCCTGGTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKSPSSSASSVCQESGPRNGRS*TCPGLR Trigger: CCTTAGACCAGGACATGTTCAACTCCTTCCATTTCT...TGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR TCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACTCTTCACCATTTCACTaGCCAACTTGTAGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHSSPFH*PTCRKS Trigger: GGATTTCCTACAAGTTGGTCAGTGAAATGGTGAAGA...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCAGAGCCAGCAAAGCTaGCTGACTGGTTTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISQSQQS*LTGFPH Trigger: GTGAGGAAAACCAGTCAGGCAGCTTTGCTGGCTCTG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTGATCCACTCTCCTCGGGGTCCTaGTGGAGCTCTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCQLSVLEKGRSLTSTDPLSSGS*WSSLSR Trigger: TCTTGATAAAGAGCTCCAGCAGGACCCCGAGGAGAG...TGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATACCCGGCAGACTGTATaGACAGTGCTTAGCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYTRQTV*TVLSDL Trigger: GAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGT...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTTGTCCTTCCCAACCATaGGGGCCATCTTGCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFCPSQP*GPSCTL Trigger: TAATGTGCAAGATGGCCCCCATGGTTGGGAAGGACA...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TACAACATCCTGGACTTTGGGTCTCCTATCTTCATCCGGGCTGAAGCCATCACCTCCTCGGGGTCCTGCTaGAGCTCTTTATCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: YNILDFGSPIFIRAEAITSSGSC*SSLSRS Trigger: AGATCTTGATAAAGAGCTCCAGCAGGACCCCGAGGA...GGTGATGGCTTCAGCCCGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTTCCTCGGGGTCCTGCTaGAGCTCTTTATCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFSSGSC*SSLSRS Trigger: AGATCTTGATAAAGAGCTCCAGCAGGACCCCGAGGA...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACTCTTCAATGACAGTCTaGCAGACAAAGACAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHSSMTV*QTKTKA Trigger: AGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAAGA...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGAAAGTGCACAGCAAACTaGTCCATGGGGAGGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGRKCTAN*SMGRQS Trigger: CGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTT...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGCCTCCTGGTGACAGCTaGCAGAGGCTAAGAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVPPGDS*QRLRST Trigger: AGTACTTCTTAGCCTCTGCCAGCTGTCACCAGGAGG...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGAATCACATCAGACTCTaGGCTGTAGTCATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: KPLVLGVGNLHLRMSWQENHIRL*AVVIHI Trigger: GATGTGGATGACTACAGCTCAGAGTCTGATGTGATT...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGTCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAAGTCTGGAAGCTCACTaGCACACACTTCATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRKSPSSSASSVCQESSLEAH*HTLHLV Trigger: TACAAGATGAAGTGTGTGTCAGTGAGCTTCCAGACT...TGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGACCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCGGCAGTCGTCTTCAATaGCAGTCTGGCAGACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISGSRLQ*QSGRQR Trigger: TCTTTGTCTGCCAGACTGTCATTGAAGACGACTGCC...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCAACATTTCATCTTGTaGGACGAAGTCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISQHFIL*DEVQGS Trigger: GGACCCCTGGACTTCGTCTCACAAGATGAAATGTTG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | ACTGATCCAGTAACGCTTGTGGTACAACATCCTGGACTTTGGGTCTCCTATCTTCCTCCTCAGCAGCGCTaGTCAAAGGCACACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDPVTLVVQHPGLWVSYLPPQQR*SKAHKC Trigger: ACACTTGTGTGCCTTTGATCAGCGCTGCTGAGGAGG...AAGATAGGAGACCCAAAGTCCAGGATGTTGTACCACAAGCGTTACTGGATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACCAAAACAGTGCAATGTaGGGCACTTGTTCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLAISVSTVCAREGSVIDQNSAM*GTCSIS Trigger: GCTGATGGAACAAGTGCCGCACATTGCACTGTTTTG...GTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTAGGTGGAGGAAGCTGTaGTCATTGCATCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFRWRKL*SLHLQR Trigger: TCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCT...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCTCACCTGGTTATTCTaGTCTGCGAGGTATCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISLTWLF*SARYLT Trigger: GGTCAGATACCTCGCAGACCAGAATAACCAGGTGAG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTCGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRAREHPG*KLAGQP Trigger: CGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACG...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGCTGCAAGCTCATGGATaGAGAAGGCTAGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVLQAHG*RRLESF Trigger: GAAGGACTCTAGCCTTCTCCATCCATGAGCTTGCAG...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACACAGATTCAGAGCGATaGGTCGTAGGTAATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHTDSER*VVGNHK Trigger: TTTATGATTACCTACGACCCATCGCTCTGAATCTGT...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATATCTACTCCGAAGGTTaGTGGTGTTGCTGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYIYSEG*WCCCVE Trigger: CTCCACACAGCAACACCACCAACCTTCGGAGTAGAT...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATGGTCTGCGAGGTATCTaGCCACAATTGGTAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYGLRGI*PQLVVS Trigger: ACTTACTACCAATTGTGGTCAGATACCTCGCAGACC...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACGGGCAGTCAGGTCTATaGGGACAGGGCACACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHGQSGL*GQGTPW Trigger: CCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCC...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGTGCCGAGGAGTCTTCTaGGTTCTTGCTCTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVCRGVF*VLALIF Trigger: AAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCA...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGGTGGTGTTGCTGTGTGGAGTTTCTTCACCATTTCACTGACCAACTTGCAGAGCCAGCAAAGCTaGCTGACTGGTTTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVGGVAVWSFFTISLTNLQSQQS*LTGFPH Trigger: GTGAGGAAAACCAGTCAGGCAGCTTTGCTGGCTCTG...CAAGTTGGTCAGTGAAATGGTGAAGAAACTCCACACAGCAACACCACCAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCAGGGCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTCAACATTTCTTCTGTTaGTTGTTGGCCAACTACACT | + |
|
Preference number: 4 (lower is better) Translates to: KSQGHTRQTVCTVLSDLSQHFFC*LLANYT Trigger: AGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTG...ACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCCCTGACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGAGCGTCCTCTGGCCTaGGATGCTCTTCTTCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPERPLA*DALLLR Trigger: TCGTAGAAGAAGAGCATCGCAGGCCAGAGGACGCTC...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGCTCTCCTCGGGGTCCTaGTGGAGCTCTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWLSSGS*WSSLSR Trigger: TCTTGATAAAGAGCTCCAGCAGGACCCCGAGGAGAG...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGCTCACCTGGTTATTCTaGTCTGCGAGGTATCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FVIYTRQELFTLRAGLGRLTWLF*SARYLT Trigger: GGTCAGATACCTCGCAGACCAGAATAACCAGGTGAG...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGATTATCAGAGCACAGCTaGAAGAACCTGGGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGRLSEHS*KNLGSN Trigger: GTTGCTGCCCAGGTTCTTCCAGCTGTGCTCTGATAA...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGTTATCAGAGCACAGCTaGAAGAACCTGGGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVIYTRQELFTLRAGLGRLSEHS*KNLGSN Trigger: GTTGCTGCCCAGGTTCTTCCAGCTGTGCTCTGATAA...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAAGTGCCCAGGTGTCTTaGCAGCACAGCCTTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGSAQVS*QHSLRG Trigger: GCCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACT...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGGAGTCCTCCAGAAATaGAAGGAGTTGAACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVGVLQK*KELNMS Trigger: GGACATGTTCAACTCCTTCCATTTCTGGAGGACTCC...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCTACTCCGAAGGTTGGTaGTGTTGCTGTGTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISYSEGW*CCCVEF Trigger: AAACTCCACACAGCAACACCACCAACCTTCGGAGTA...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| 3UTR CAA 72 bp | CAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATaGACAAGTACTGATCCAGTAACGCTTGTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QCQLSVLEKGRS*TSTDPVTLVVQ Trigger: TTGTACCACAAGCGTTACTGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159646.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGTTGGCGAACCCAACGTaGAGGATCACTGATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELLANPT*RITDQV Trigger: AACTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCAGAAATGGAAGGAGTTaGACATGTCCTGGTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISRNGRS*TCPGLR Trigger: CCTTAGACCAGGACATGTTCAACTCCTTCCATTTCT...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACCCATCTGCAGGGCCATaGTTGTCTGCTCCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHPSAGP*LSAPRP Trigger: AGGCCGTGGAGCAGACAATCATGGCCCTGCAGATGG...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTAAATACGTTCTCACTTaGAGCATACTTGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFKYVLT*SILVQP Trigger: AGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTT...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGCAAAACAGTGCAATGTaGGGCACTTGTTCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELQNSAM*GTCSIS Trigger: GCTGATGGAACAAGTGCCGCACATTGCACTGTTTTG...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGATCTTCACATCATCATTaGTGTCTGGGGCAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGRSSHHH*CLGQSG Trigger: ACCTGACTGCCCCAGACAGCAATGATGATGTGAAGA...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTCTGTGCTCGAGAATCTTCACATCATCATTaGTGTCTGGGGCAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYAQCLAISVSTVCARESSHHH*CLGQSG Trigger: ACCTGACTGCCCCAGACAGCAATGATGATGTGAAGA...TTCTCGAGCACAGACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCCGGGACGCAGACTTaGTGTTGGTGTCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPAGTQT*CWCQAF Trigger: GAAAGCCTGACACCAACAGCAAGTCTGCGTCCCGGC...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGAGTGTCAACTGTCTGTaGTCGAGAAGGGTCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWSVNCL*SRRVGH Trigger: ATGACCGACCCTTCTCGAGCACAGACAGTTGACACT...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGTCCCCAAGGATCACTaGAAGCTCATGGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWVPKDH*KLMDGE Trigger: TTCTCCATCCATGAGCTTGCAGTGATCCTTGGGGAC...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGAGAAGGTTGGTGGTGTTaGTGTGTGGAGTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGREGWWC*CVEFLH Trigger: GTGAAGAAACTCCACACAGCAACACCACCAACCTTC...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGAACAGCTGGAAGAACCTaGGCAGCAACATTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGRTAGRT*AATFLL Trigger: CAGAAGAAATGTTGCTGCCCAGGTTCTTCCAGCTGT...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGGAGTCCTCCAGAAATaGAAGGAGTTGAACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELGVLQK*KELNMS Trigger: GGACATGTTCAACTCCTTCCATTTCTGGAGGACTCC...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCGGGTCATCCATGTGTaGCTCAAGGTTTTCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISRVIHV*LKVFYH Trigger: ATGATAGAAAACCTTGAGCCACACATGGATGACCCG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCGGTGGTGTTGCTGTGTaGAGTTTCTTCACCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISGGVAV*SFFTIS Trigger: TGAAATGGTGAAGAAACTCCACACAGCAACACCACC...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTTCTTCAATGACAGTCTaGCAGACAAAGACAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFSSMTV*QTKTKA Trigger: AGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAAGA...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGCACTGGCCCGAGCTTaGTGGATTAGCAAACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGALARA*WISKRG Trigger: TCCACGTTTGCTAATCCATCAAGCTCGGGCCAGTGC...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACGCACTGGCCCGAGCTTaGTGGATTAGCAAACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHALARA*WISKRG Trigger: TCCACGTTTGCTAATCCATCAAGCTCGGGCCAGTGC...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TACCAGCTCATTGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGAAATACGTTCTCACTTaGAGCATACTTGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YQLIDEIYSEGWWCCCVEKYVLT*SILVQP Trigger: AGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTT...CTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGTTTCCAAGACAGCAATaGAGTCTCTCTCATCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELFPRQQ*SLSHHR Trigger: GCGATGATGAGAGAGACTGCATTGCTGTCTTGGAAA...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACGCCGGGACGCAGACTTaGTGTTGGTGTCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHAGTQT*CWCQAF Trigger: GAAAGCCTGACACCAACAGCAAGTCTGCGTCCCGGC...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGTCCCCAAGGATCACTaGAAGCTCATGGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPVPKDH*KLMDGE Trigger: TTCTCCATCCATGAGCTTGCAGTGATCCTTGGGGAC...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGACAAAGACAAAGGCTTaGCGACCAGACCATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVIYTRQELFTLRAGLGRTKTKA*RPDHFG Trigger: TCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGT...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGGACAGGGCACACCTTaGTCTCCACGTCAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPGQGTP*SPRQIA Trigger: AGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCC...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTTCTTCTGTTGCTTGTTaGCCAACTACACTGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFSSVAC*PTTLQI Trigger: TATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGA...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAGTAAAATCAGCTGTTCTGCCAGTTCAGCTCGAAAGCGCCAATTTCTATTATCAGAGCACAGCTaGAAGAACCTGGGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSKISCSASSARKRQFLLSEHS*KNLGSN Trigger: GTTGCTGCCCAGGTTCTTCCAGCTGTGCTCTGATAA...TAGAAATTGGCGCTTTCGAGCTGAACTGGCAGAACAGCTGATTTTACTTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCTCATCTTTAAAGCACTaGCCCGAGCTTGATGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LSCPVHIHLLAVRMSFISSSLKH*PELDGL Trigger: TAATCCATCAAGCTCGGGCCAGTGCTTTAAAGATGA...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGAGTTGAACATGTCCTaGTCTAAGGGAGTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPELNMS*SKGVAS Trigger: AGAGGCCACTCCCTTAGACCAGGACATGTTCAACTC...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTATCTACTCCGAAGGTTaGTGGTGTTGCTGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPIYSEG*WCCCVE Trigger: CTCCACACAGCAACACCACCAACCTTCGGAGTAGAT...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| 3UTR CAA 72 bp | GTCTTCAATGACAGTCTGGCAGACAAAGACAAAGGCTaGCCGACCAGACCATTTTGGACACCTGCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: VFNDSLADKDKG*PTRPFWTPAKI Trigger: AATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCATTGGCGAACCCAACGTaGAGGATCACTGATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPALANPT*RITDQV Trigger: AACTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATATCTTCATCCGGGCTaGAGCCATCACCAGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGYLHPG*SHHQGL Trigger: TAAGCCCTGGTGATGGCTTCAGCCCGGATGAAGATA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCATCTTCACATCATCATTaGTGTCTGGGGCAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPASSHHH*CLGQSG Trigger: ACCTGACTGCCCCAGACAGCAATGATGATGTGAAGA...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAACATTTCTTCTGTTaGTTGTTGGCCAACTACACT | + |
|
Preference number: 4 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYQHFFC*LLANYT Trigger: AGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTG...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGGAGGGGTGAATGCTTaGAAAGTACTTGACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWGGVNA*KVLDIT Trigger: AGTGATGTCAAGTACTTTGCAAGCATTCACCCCTCC...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAGCAAAGCTGCCTGACTaGTTTTCCTCACCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPAAKLPD*FSSPGY Trigger: ATAACCAGGTGAGGAAAACCAGTCAGGCAGCTTTGC...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACGGACAGGGCACACCTTaGTCTCCACGTCAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHGQGTP*SPRQIA Trigger: AGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCC...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTACAGCTGGAAGAACCTaGGCAGCAACATTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPTAGRT*AATFLL Trigger: CAGAAGAAATGTTGCTGCCCAGGTTCTTCCAGCTGT...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGTCATCTTTAAAGCACTaGCCCGAGCTTGATGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTTGIGSRQPAPANELSSLKH*PELDGL Trigger: TAATCCATCAAGCTCGGGCCAGTGCTTTAAAGATGA...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACATCTCCTGTTCTCTCTaGGCTGAGTCTCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHISCSL*AESLLG Trigger: CCCGAGGAGAGACTCAGCCCAGAGAGAACAGGAGAT...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTCCGACCAGACCATTTTaGACACCTGCCAAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPPTRPF*TPAKIL Trigger: GAGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGG...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTCAGCAAACTGGTCCATaGGGAGGCAGTCGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPQQTGP*GGSRLQ Trigger: TTGAAGACGACTGCCTCCCCATGGACCAGTTTGCTG...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACCAGCAAACTGGTCCATaGGGAGGCAGTCGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHQQTGP*GGSRLQ Trigger: TTGAAGACGACTGCCTCCCCATGGACCAGTTTGCTG...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTAAGTGCACAGCAAACTaGTCCATGGGGAGGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRAKCTAN*SMGRQS Trigger: CGACTGCCTCCCCATGGACCAGTTTGCTGTGCACTT...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACCCTCCTGGTGACAGCTaGCAGAGGCTAAGAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHPPGDS*QRLRST Trigger: AGTACTTCTTAGCCTCTGCCAGCTGTCACCAGGAGG...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| 3UTR CAA 72 bp | CATTTTGGACACCTGCCAAAATTCTCTACCAGCTCATaGATGAGATCTACTCCGAAGGTTGGTGGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFGHLPKFSTSS*MRSTPKVGGVA Trigger: AGCAACACCACCAACCTTCGGAGTAGATCTCATCAATGAGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAAATCACATCAGACTCTaGGCTGTAGTCATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPANHIRL*AVVIHI Trigger: GATGTGGATGACTACAGCTCAGAGTCTGATGTGATT...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | GAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCGTCCGTCGGATTTCTTaGCATGTTGCACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EILQTFCKCVQQCAALGVVRRIS*HVAQET Trigger: TGTCTCCTGTGCAACATGTCAAGAAATCCGACGGAC...GACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCCGTCGGATTTCTTaGCATGTTGCACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGVRRIS*HVAQET Trigger: TGTCTCCTGTGCAACATGTCAAGAAATCCGACGGAC...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCTCTCCTCAGCAGCGCTaGTCAAAGGCACACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKISPQQR*SKAHKC Trigger: ACACTTGTGTGCCTTTGATCAGCGCTGCTGAGGAGA...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTTCTCCTCAGCAGCGCTaGTCAAAGGCACACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRASPQQR*SKAHKC Trigger: ACACTTGTGTGCCTTTGATCAGCGCTGCTGAGGAGA...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGTATCTTCATCCGGGCTaGAGCCATCACCAGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTYLHPG*SHHQGL Trigger: TAAGCCCTGGTGATGGCTTCAGCCCGGATGAAGATA...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGAAATACGTTCTCACTTaGAGCATACTTGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWKYVLT*SILVQP Trigger: AGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTT...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACTCTTGACAAAACAGTaGAATGTGCGGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPALLTKQ*NVRHLF Trigger: GAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAG...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTCAGAGCCAGCAAAGCTaGCTGACTGGTTTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRAQSQQS*LTGFPH Trigger: GTGAGGAAAACCAGTCAGGCAGCTTTGCTGGCTCTG...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCTCTCCTCGGGGTCCTaGTGGAGCTCTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTLSSGS*WSSLSR Trigger: TCTTGATAAAGAGCTCCAGCAGGACCCCGAGGAGAG...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTACCCGGCAGACTGTATaGACAGTGCTTAGCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRATRQTV*TVLSDL Trigger: GAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGT...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGACAAGTACTGATCCAGTAACGCTTGTGGTACAACATCCTGGACTTTGGCGGGTCATCCATGTGTaGCTCAAGGTTTTCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSTDPVTLVVQHPGLWRVIHV*LKVFYH Trigger: ATGATAGAAAACCTTGAGCCACACATGGATGACCCG...CCAAAGTCCAGGATGTTGTACCACAAGCGTTACTGGATCAGTACTTGTCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159646.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCGTCCGTCGGATTTCTTaGCATGTTGCACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKIVRRIS*HVAQET Trigger: TGTCTCCTGTGCAACATGTCAAGAAATCCGACGGAC...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATGCTTGCAAAGTACTTaGCATCACTGTCTCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGCLQST*HHCLGP Trigger: TGGACCGAGACAGTGATGTCAAGTACTTTGCAAGCA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATTGGTACTGGAGGGGTaGATGCTTGCAAAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGLVLEG*MLAKYL Trigger: CAAGTACTTTGCAAGCATTCACCCCTCCAGTACCAA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACGAAGGTTGGTGGTGTTaGTGTGTGGAGTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHEGWWC*CVEFLH Trigger: GTGAAGAAACTCCACACAGCAACACCACCAACCTTC...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCCTCACCTGGTTATTCTaGTCTGCGAGGTATCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKILTWLF*SARYLT Trigger: GGTCAGATACCTCGCAGACCAGAATAACCAGGTGAG...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCTCCTCGGGGTCCTGCTaGAGCTCTTTATCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKISSGSC*SSLSRS Trigger: AGATCTTGATAAAGAGCTCCAGCAGGACCCCGAGGA...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTCAACATCCTGGACTTTaGGTCTCCTATCTTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPQHPGL*VSYLHP Trigger: CGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTG...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATACTCCGAAGGTTGGTaGTGTTGCTGTGTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGYSEGW*CCCVEF Trigger: AAACTCCACACAGCAACACCACCAACCTTCGGAGTA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTTGCCGAGGAGTCTTCTaGGTTCTTGCTCTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRACRGVF*VLALIF Trigger: AAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCA...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTAGTCTGGAAGCTCACTaGCACACACTTCATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPSLEAH*HTLHLV Trigger: TACAAGATGAAGTGTGTGTCAGTGAGCTTCCAGACT...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTTGCTTGCAAAGTACTTaGCATCACTGTCTCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRACLQST*HHCLGP Trigger: TGGACCGAGACAGTGATGTCAAGTACTTTGCAAGCA...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTTTGGTACTGGAGGGGTaGATGCTTGCAAAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRALVLEG*MLAKYL Trigger: CAAGTACTTTGCAAGCATTCACCCCTCCAGTACCAA...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTCAAAACAGTGCAATGTaGGGCACTTGTTCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRAQNSAM*GTCSIS Trigger: GCTGATGGAACAAGTGCCGCACATTGCACTGTTTTG...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTCAACATTTCTTCTGTTaGTTGTTGGCCAACTACACT | + |
|
Preference number: 4 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPQHFFC*LLANYT Trigger: AGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTG...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTACAAAGACAAAGGCTTaGCGACCAGACCATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPTKTKA*RPDHFG Trigger: TCCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGT...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAAAATGTGGCATCAAGTaGACAGCAAACTGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGKCGIK*TANWSM Trigger: CATGGACCAGTTTGCTGTGCACTTGATGCCACATTT...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGGAGGGGTGAATGCTTaGAAAGTACTTGACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPGGVNA*KVLDIT Trigger: AGTGATGTCAAGTACTTTGCAAGCATTCACCCCTCC...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTAGGTGGAGGAAGCTGTaGTCATTGCATCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRARWRKL*SLHLQR Trigger: TCTCTGAAGATGCAATGAGCACAGCTTCCTCCACCT...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACGCAAAGCTGCCTGACTaGTTTTCCTCACCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHAKLPD*FSSPGY Trigger: ATAACCAGGTGAGGAAAACCAGTCAGGCAGCTTTGC...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAAAATATCTCCAAAATTaGCAGCGCAGACCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGKYLQN*QRRPSG Trigger: TCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTT...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTCAACATCCTGGACTTTaGGTCTCCTATCTTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRAQHPGL*VSYLHP Trigger: CGGATGAAGATAGGAGACCCAAAGTCCAGGATGTTG...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGAAATCATAAACATCTCTaGGACTGTATAACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSFPKGKCSANSSHQSGRNHKHL*DCITPE Trigger: TTCTGGAGTTATACAGTCCCAGAGATGTTTATGATT...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGAATCATAAACATCTCTaGGACTGTATAACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVIYTRQELFTLRAGLGRNHKHL*DCITPE Trigger: TTCTGGAGTTATACAGTCCCAGAGATGTTTATGATT...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAACAGATTCAGAGCGATaGGTCGTAGGTAATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLTLKTTGIGSRQPATDSER*VVGNHK Trigger: TTTATGATTACCTACGACCCATCGCTCTGAATCTGT...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGACGAAGTCCAGGGCTaGAGGTATAATAATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSFVIYTRQELFTLRADEVQG*RYNNHI Trigger: GATGTGATTATTATACCTTCAGCCCTGGACTTCGTC...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCGACGAAGTCCAGGGCTaGAGGTATAATAATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKIDEVQG*RYNNHI Trigger: GATGTGATTATTATACCTTCAGCCCTGGACTTCGTC...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000162109.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGAGAAATGGAAGGAGTTaGACATGTCCTGGTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTRNGRS*TCPGLR Trigger: CCTTAGACCAGGACATGTTCAACTCCTTCCATTTCT...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGAGTCTGGAAGCTCACTaGCACACACTTCATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTSLEAH*HTLHLV Trigger: TACAAGATGAAGTGTGTGTCAGTGAGCTTCCAGACT...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATCTTCACCATTTCACTaGCCAACTTGTAGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGSSPFH*PTCRKS Trigger: GGATTTCCTACAAGTTGGTCAGTGAAATGGTGAAGA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTTCCAAGACAGCAATaGAGTCTCTCTCATCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHFPRQQ*SLSHHR Trigger: GCGATGATGAGAGAGACTGCATTGCTGTCTTGGAAA...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCCTCTTGACAAAACAGTaGAATGTGCGGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKILLTKQ*NVRHLF Trigger: GAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAG...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGGGAAGCTGTGCTCATTaGATCTTCAGAGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTGSCAH*IFREFG Trigger: ACCAAACTCTCTGAAGATGCAATGAGCACAGCTTCC...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGGGTGGTGTTGCTGTGTaGAGTTTCTTCACCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTGGVAV*SFFTIS Trigger: TGAAATGGTGAAGAAACTCCACACAGCAACACCACC...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTTGGCCAACTACACTaGAAATATCTCCAAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGVGQLH*KYLQNW Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAAC...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCACCATTTTGGACACCTaGCAAAATTCTCTACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKITILDT*QNSLPA Trigger: AGCTGGTAGAGAATTTTGGCAGGTGTCCAAAATGGT...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATCTTCTGTTGCTTGTTaGCCAACTACACTGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GEILQTFCKCVQQCAALGSSVAC*PTTLQI Trigger: TATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTTCTTCTGTTGCTTGTTaGCCAACTACACTGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPSSVAC*PTTLQI Trigger: TATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGA...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGTCATCTTTAAAGCACTaGCCCGAGCTTGATGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTSSLKH*PELDGL Trigger: TAATCCATCAAGCTCGGGCCAGTGCTTTAAAGATGA...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGGTTGGCCAACTACACTaGAAATATCTCCAAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTVGQLH*KYLQNW Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAAC...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCGTTGGCCAACTACACTaGAAATATCTCCAAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTFCKCVQQCAALGVKIVGQLH*KYLQNW Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAAC...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS TCA 90 bp | CACAGCCTTCGAGGCTCTCCAGCCTGGCGCTGGAGTGAGGGGCACTaGGGTCTGAAGGAGCGTCCTCTGGCCTGCGATGCTCTTCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HSLRGSPAWRWSEGH*GLKERPLACDALLL Trigger: TAGAAGAAGAGCATCGCAGGCCAGAGGACGCTCCTTCAGACCTCAGTGCCCCTCACTCCAGCGCCAGGCTGGAGAGCCTCGAAGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CCA 90 bp | CACTCCGCTGCTCTACACCACCAGTCTCTTCGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCTGTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSAALHHQSLREHPG*KLAGQPTARPPVLS Trigger: AGACAGCACAGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACGAAGAGACTGGTGGTGTAGAGCAGCGGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS TCA 90 bp | TTCGAGGCTCTCCAGCCTGGCGCTGGAGTGAGGGGCACTGAGGTCTaGAGGAGCGTCCTCTGGCCTGCGATGCTCTTCTTCTACGACATC | + |
|
Preference number: 5 (lower is better) Translates to: FEALQPGAGVRGTEV*RSVLWPAMLFFYDI Trigger: GATGTCGTAGAAGAAGAGCATCGCAGGCCAGAGGACGCTCCTTCAGACCTCAGTGCCCCTCACTCCAGCGCCAGGCTGGAGAGCCTCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CCA 90 bp | CACTCCGCTGCTCTACACCACCAGTCTCTTCGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCTGTGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSAALHHQSLREHPG*KLAGQPTARPPVLS Trigger: TGAAAGCACAGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACGAAGAGACTGGTGGTGTAGAGCAGCGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | TCATCTTGTAGCTCACTCCGCTGCTCTACACCACCAGTCTCTTCGTaGGCATCCAGGCTGGAAGCTCGCAGGGCAGCCGACAGCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSSLRCSTPPVSS*ASRLEARRAADSTS Trigger: GGACGTGCTGTCGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACGAAGAGACTGGTGGTGTAGAGCAGCGGAGTGAGCTACAAGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | AGCATACTTGTCCAGCCTCCCCAAGGGTGTCAACATTTCATCTTGTaGGACGAAGTCCAGGGGTCCGTCCGCGTCCTCCGGCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SILVQPPQGCQHFIL*DEVQGSVRVLRQVL Trigger: GAGGACCTGCCGGAGGACGCGGACGGACCCCTGGACTTCGTCTCACAAGATGAAATGTTGACACCCTTGGGGAGGCTGGACAAGTATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGAGGACAGGGCACACCTaGGTCTCCACGTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMRTGHT*VSTSNR Trigger: GCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCT...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTGTATGCATCACTTGCAGCATACTaGTCCAGCCTCCCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QCQFCLPRVRATPGRLYASLAAY*SSLPKG Trigger: ACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGA...TGCATACAGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS TCA 90 bp | GGCCTGGTAGAGGGGCTGCAGGTACATCTCCTGTTCTCTCTGGGCTaGGTCTCTCCTCGGGGTCCTGCTGGAGCTCTTTATCAAGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: GLVEGLQVHLLFSLG*VSPRGPAGALYQDL Trigger: TAGATCTTGATAAAGAGCTCCAGCAGGACCCCGAGGAGAGACTCAGCCCAGAGAGAACAGGAGATGTACCTGCAGCCCCTCTACCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS GCA 90 bp | ATCCAGGCTGGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCTGTaGTTTCACATCCGGGTCATCCATGTGTGGCTCAAGGTTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: IQAGSSQGSRQHVHL*FHIRVIHVWLKVFY Trigger: ATAGAAAACCTTGAGCCACACATGGATGACCCGGATGTGAAAGCACAGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCCAGCCTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS CCA 90 bp | TTAGGTAGAGGAGTCCTCCAGAAATGGAAGGAGTTGAACATGTCCTaGTCTAAGGGAGTGGCCTCTGGGGAGCTGGTGCCAGCGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRGVLQKWKELNMS*SKGVASGELVPASG Trigger: GCCAGACGCTGGCACCAGCTCCCCAGAGGCCACTCCCTTAGACCAGGACATGTTCAACTCCTTCCATTTCTGGAGGACTCCTCTACCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGTGTCCGTCGGATTTCTaGACATGTTGCACAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMCPSDF*TCCTGD Trigger: GTCTCCTGTGCAACATGTCAAGAAATCCGACGGACA...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCGAGTGCCCAGGTGTCTaGGCAGCACAGCCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSCPVHIHLLAVRMSFISECPGV*AAQPSR Trigger: CCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACTC...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGGTCACAGGGGTGCAGCACGACGCAGACTTGCTGTaGGTGTCAGGCTTTCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SNSMIQAAHPRVVTGVQHDADLL*VSGFLP Trigger: TGGTAGAAAGCCTGACACCAACAGCAAGTCTGCGTC...GTGCTGCACCCCTGTGACCACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATGGCCGGGACGCAGACTaGCTGTTGGTGTCAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYGRDAD*LLVSGF Trigger: AAAGCCTGACACCAACAGCAAGTCTGCGTCCCGGCC...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCTCGTAAGTCTCCCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCACCACCTGTGCTGTCTTaGTCTTCTGCCGAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSRKSPSSSASSVCQESPPVLS*SSAEES Trigger: AGACTCCTCGGCAGAAGACAAAGACAGCACAGGTGG...TGACTCTTGGCAGACAGAACTGGCACTGCTTGAGGGAGACTTACGAGACCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS TCA 90 bp | ACTTTGTCCGTCGGATTTCTTGACATGTTGCACAGGAGACAGCCATaGAGCACTCAGCACAGGCCTTTCGGACGCCCCACACGTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLSVGFLDMLHRRQP*STQHRPFGRPTRYQ Trigger: CTGATAACGTGTGGGGCGTCCGAAAGGCCTGTGCTGAGTGCTTCATGGCTGTCTCCTGTGCAACATGTCAAGAAATCCGACGGACAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS CCA 90 bp | CCTTTCGGACGCCCCACACGTTATCAGAGCACAGCTGGAAGAACCTaGGCAGCAACATTTCTTCTGTTGCTTGTTGGCCAACTACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFGRPTRYQSTAGRT*AATFLLLLVGQLHC Trigger: GCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGCTGCCCAGGTTCTTCCAGCTGTGCTCTGATAACGTGTGGGGCGTCCGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAAGCAGTGCCAGTTCTGTCTGCCAAGAGTCAGGGCCACACCCGGCAGACTTTCTTCTGTTGCTTGTaGGCCAACTACACTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PQAVPVLSAKSQGHTRQTFFCCL*ANYTAN Trigger: ATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAA...AGTCTGCCGGGTGTGGCCCTGACTCTTGGCAGACAGAACTGGCACTGCTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGAGTGCCCAGGTGTCTaGGCAGCACAGCCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWECPGV*AAQPSR Trigger: CCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACTC...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGCAGGAGGACGCAGACTTGCTGTaGGTGTCAGGCTTTCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: KPLVLGVGNLHLRMSWQEDADLL*VSGFLP Trigger: TGGTAGAAAGCCTGACACCAACAGCAAGTCTGCGTC...CTCCTGCCAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | AATCGCTCAATCAGTTCCTGCTCCAGCAGAGCCAGCAAAGCTGCCTaGCTGGTTTTCCTCACCTGGTTATTCTGGTCTGCGAGGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NRSISSCSSRASKAA*LVFLTWLFWSARYL Trigger: CAGATACCTCGCAGACCAGAATAACCAGGTGAGGAAAACCAGTCAGGCAGCTTTGCTGGCTCTGCTGGAGCAGGAACTGATTGAGCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
||
| CDS GCA 90 bp | GTCAAATCGCTCAATCAGTTCCTGCTCCAGCAGAGCCAGCAAAGCTaGCTGACTGGTTTTCCTCACCTGGTTATTCTGGTCTGCGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VKSLNQFLLQQSQQS*LTGFPHLVILVCEV Trigger: TACCTCGCAGACCAGAATAACCAGGTGAGGAAAACCAGTCAGGCAGCTTTGCTGGCTCTGCTGGAGCAGGAACTGATTGAGCGATTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
||
| CDS CCA 90 bp | GCACATTATAGCCACAGCTTCTGTCTTCACATCATCATTGCTGTCTaGGGCAGTCAGGTCTATGAGGACAGGGCACACCTTGGTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHYSHSFCLHIIIAV*GSQVYEDRAHLGLH Trigger: GTGGAGACCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGAAGACAGAAGCTGTGGCTATAATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCTCACTTGCAGCATACTaGTCCAGCCTCCCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSCPVHIHLLAVRMSFISSLAAY*SSLPKG Trigger: ACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGA...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTGATCCAGTAACGGCTCCGCTCTCACAGTaGGTTCGGAGTCATCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QLSVLEKGRSLTSTDPVTAPLSQ*VRSHQL Trigger: TAGCTGATGACTCCGAACCAACTGTGAGAGCGGAGC...CGTTACTGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTGATCCATGCAATGTGCGGCACTaGTTCCATCAGCTCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QCQLSVLEKGRSLTSTDPCNVRH*FHQLRS Trigger: AGAGCGGAGCTGATGGAACAAGTGCCGCACATTGCA...TGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTGTCTTCACATCATCATaGCTGTCTGGGGCAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFVFTSS*LSGAVR Trigger: CCTGACTGCCCCAGACAGCAATGATGATGTGAAGAC...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGGCAGGGCAGCCAAGGAGCTGAACAGGCTCAGCACCTAGAAGAAATGTTCTTCTGTTGCTTGTaGGCCAACTACACTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WAGQGSQGAEQAQHLEEMFFCCL*ANYTAN Trigger: ATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAA...CATTTCTTCTAGGTGCTGAGCCTGTTCAGCTCCTTGGCTGCCCTGCCCAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGGCCGGGACGCAGACTaGCTGTTGGTGTCAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPLSFIHAKNYSHLGLGWGRDAD*LLVSGF Trigger: AAAGCCTGACACCAACAGCAAGTCTGCGTCCCGGCC...CCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | CTTCTGTCTTCACATCATCATTGCTGTCTGGGGCAGTCAGGTCTATaGGGACAGGGCACACCTTGGTCTCCACGTCAAATCGCTCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSHHHCCLGQSGL*GQGTPWSPRQIAQS Trigger: TGATTGAGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGAAGACAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATGTCTTCACATCATCATaGCTGTCTGGGGCAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYVFTSS*LSGAVR Trigger: CCTGACTGCCCCAGACAGCAATGATGATGTGAAGAC...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCAACTGTCTGTGCTCGAGAAGGGTCGGTCATTGACAAGTACTGATCCAGTCTTCACATCATCATaGCTGTCTGGGGCAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCQLSVLEKGRSLTSTDPVFTSS*LSGAVR Trigger: CCTGACTGCCCCAGACAGCAATGATGATGTGAAGAC...TGGATCAGTACTTGTCAATGACCGACCCTTCTCGAGCACAGACAGTTGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTGACAAAGACAAAGGCTaGCCGACCAGACCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGLSCPVHIHLLAVRMSFDKDKG*PTRPFW Trigger: CCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTC...AAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS GCA 90 bp | GGAAAAAGCATACGGTATAGAAGGCCGGTTCTCTTGACAAAACAGTaGAATGTGCGGCACTTGTTCCATCAGCTCCGCTCTCACAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSIRYRRPVLLTKQ*NVRHLFHQLRSHSW Trigger: CCAACTGTGAGAGCGGAGCTGATGGAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCTATACCGTATGCTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAAGGACAGGGCACACCTaGGTCTCCACGTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLTLKTTGIGSRQPARTGHT*VSTSNR Trigger: GCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCT...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCAAATATCTCCAAAATaGGCAGCGCAGACCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSCPVHIHLLAVRMSFISQISPK*AAQTFR Trigger: CCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGCAAATATCTCCAAAATaGGCAGCGCAGACCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVQISPK*AAQTFR Trigger: CCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTG...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGTACCACAACAGTTCTAACAGCATGATTCAGGCTGCACACCCCAGAGTGTGTCCGTCGGATTTCTaGACATGTTGCACAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLYHNSSNSMIQAAHPRVCPSDF*TCCTGD Trigger: GTCTCCTGTGCAACATGTCAAGAAATCCGACGGACA...CACTCTGGGGTGTGCAGCCTGAATCATGCTGTTAGAACTGTTGTGGTACAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACACCCGGCAGACTGTATGCACAGTGCTTAGCGATCTCAGTGTCAACTGTGAGTCTTCTGAGTTCTaGCTCTCATCTTTAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHTRQTVCTVLSDLSVNCESSEF*LSSLKH Trigger: GTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTC...ACAGTTGACACTGAGATCGCTAAGCACTGTGCATACAGTCTGCCGGGTGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATTCTCTCATCCTGTCTTaGTCTTCTGCCGAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYSLILS*SSAEES Trigger: AGACTCCTCGGCAGAAGACAAAGACAGGATGAGAGA...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGAGATCTACTCCGAAGGTaGGTGGTGTTGCTGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSFPKGKCSANSSHQSGRDLLRR*VVLLCG Trigger: TCCACACAGCAACACCACCAACCTTCGGAGTAGATC...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | AAGGCACACAAGTGTCGTGACTTATGTTACAGTCTGGAAGCTCACTaGCACACACTTCATCTTGTAGCTCACTCCGCTGCTCTACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KAHKCRDLCYSLEAH*HTLHLVAHSAALHH Trigger: GTGGTGTAGAGCAGCGGAGTGAGCTACAAGATGAAGTGTGTGTCAGTGAGCTTCCAGACTGTAACATAAGTCACGACACTTGTGTGCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTTCACTTGCAGCATACTaGTCCAGCCTCCCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPSLAAY*SSLPKG Trigger: ACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGA...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATACTCCGGGCCACCATTaGTCTGTTAAATACGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYTPGHH*SVKYVL Trigger: GAGAACGTATTTAACAGACAAATGGTGGCCCGGAGT...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTTGCAATGTGCGGCACTaGTTCCATCAGCTCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPCNVRH*FHQLRS Trigger: AGAGCGGAGCTGATGGAACAAGTGCCGCACATTGCA...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGTGTCCGTCGGATTTCTaGACATGTTGCACAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTGIGSRQPAPANELCPSDF*TCCTGD Trigger: GTCTCCTGTGCAACATGTCAAGAAATCCGACGGACA...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCTTCCCGAAGGGAAAATGCTCTGCCAATTCAAGCCATCAGTCAGGAAGATCTCTCATCCTGTCTTaGTCTTCTGCCGAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSFPKGKCSANSSHQSGRSLILS*SSAEES Trigger: AGACTCCTCGGCAGAAGACAAAGACAGGATGAGAGA...TCTTCCTGACTGATGGCTTGAATTGGCAGAGCATTTTCCCTTCGGGAAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGAGCAGCACTCTAACATaGGGAACCCTGTCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTGIGSRQPAPANELSSTLT*GTLSFA Trigger: GGCAAATGACAGGGTTCCCAATGTTAGAGTGCTGCT...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATAGGAAGCTGTGCTCATaGCATCTTCAGAGAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPFLSGAHPPSGRKNVIYRKLCS*HLQRVW Trigger: CCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCT...ATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 90 bp | TTGGTGTCAGGCTTTCTACCATTCTCATCATTGCTAGCTGCTTCCTaGGGAGACTCTGAGGACAAAGTACAGAGTAAGGAGCTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LVSGFLPFSSLLAAS*GDSEDKVQSKELST Trigger: AGTGGACAGCTCCTTACTCTGTACTTTGTCCTCAGAGTCTCCTCAGGAAGCAGCTAGCAATGATGAGAATGGTAGAAAGCCTGACACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS GCA 90 bp | ACCTGGGCAGCAACATTTCTTCTGTTGCTTGTTGGCCAACTACACTaGAAATATCTCCAAAATTGGCAGCGCAGACCTTCCGGACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TWAATFLLLLVGQLH*KYLQNWQRRPSGHE Trigger: TTCATGTCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGCTGCCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS CCA 90 bp | CTTCTGTTGCTTGTTGGCCAACTACACTGCAAATATCTCCAAAATTaGCAGCGCAGACCTTCCGGACATGAAACATTCGACAGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLVGQLHCKYLQN*QRRPSGHETFDSHS Trigger: GCTGTGACTGTCGAATGTTTCATGTCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTGGGCTGGGCAGGAGAAGGCCGGTTCTCTaGACAAAACAGTGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVIYTRQELFTLRAGLGRRRPVL*TKQCNV Trigger: CACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCT...CCTGCCCAGCCCAGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAAGGACAGGGCACACCTaGGTCTCCACGTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: GEILQTFCKCVQQCAALGRTGHT*VSTSNR Trigger: GCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCT...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGTCCGGTGCACATCCACCTTCTGGCCGTAAGAATGTCATTTATCAGCCGGACTGAAGAAACTTaGTCTGCACACAGATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCPVHIHLLAVRMSFISRTEET*SAHRFR Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCAGTCCG...GCTGATAAATGACATTCTTACGGCCAGAAGGTGGATGTGCACCGGACAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGATGCTTGCAAAGTACTaGACATCACTGTCTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTGIGSRQPAPANELMLAKY*TSLSRS Trigger: GGACCGAGACAGTGATGTCAAGTACTTTGCAAGCAT...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CCA 90 bp | AGCTCTTTATCAAGATCTATTTTAGGTAGAGGAGTCCTCCAGAAATaGAAGGAGTTGAACATGTCCTGGTCTAAGGGAGTGGCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSRSILGRGVLQK*KELNMSWSKGVASG Trigger: CCCAGAGGCCACTCCCTTAGACCAGGACATGTTCAACTCCTTCCATTTCTGGAGGACTCCTCTACCTAAAATAGATCTTGATAAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCTCCGCTCTCACAGTaGGTTCGGAGTCATCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPAPLSQ*VRSHQL Trigger: TAGCTGATGACTCCGAACCAACTGTGAGAGCGGAGC...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGCATTTCTTCTGTTGCTaGTTGGCCAACTACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTGIGSRQPAPANELHFFCC*LANYTA Trigger: TGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATG...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GATGAGATCTACTCCGAAGGTTGGTGGTGTTGCTGTGTGGAGTTTCTTCACCATCATTTCTTCTGTTGCTaGTTGGCCAACTACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DEIYSEGWWCCCVEFLHHHFFCC*LANYTA Trigger: TGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATG...ATGGTGAAGAAACTCCACACAGCAACACCACCAACCTTCGGAGTAGATCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | TACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTCGAAGGTTGGTGGTGTaGCTGTGTGGAGTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YFLLTLKTTGIGSRQPAPRRLVV*LCGVSS Trigger: TGAAGAAACTCCACACAGCAACACCACCAACCTTCG...AGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCGCTCCGCTCTCACAGTaGGTTCGGAGTCATCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQTFCKCVQQCAALGVKIAPLSQ*VRSHQL Trigger: TAGCTGATGACTCCGAACCAACTGTGAGAGCGGAGC...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGTGCAATGTGCGGCACTaGTTCCATCAGCTCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTCNVRH*FHQLRS Trigger: AGAGCGGAGCTGATGGAACAAGTGCCGCACATTGCA...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAAGAAGGCCGGTTCTCTaGACAAAACAGTGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLTLKTTGIGSRQPARRPVL*TKQCNV Trigger: CACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCT...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACCTGCGAATGAGTTGGAGTCTTCTGAGTTCTaGCTCTCATCTTTAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTGIGSRQPAPANELESSEF*LSSLKH Trigger: GTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTC...CAACTCATTCGCAGGTGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGATCTACTCCGAAGGTaGGTGGTGTTGCTGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GEILQTFCKCVQQCAALGDLLRR*VVLLCG Trigger: TCCACACAGCAACACCACCAACCTTCGGAGTAGATC...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAATGCTTGCAAAGTACTaGACATCACTGTCTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLTLKTTGIGSRQPAMLAKY*TSLSRS Trigger: GGACCGAGACAGTGATGTCAAGTACTTTGCAAGCAT...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACCAAATATCTCCAAAATaGGCAGCGCAGACCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHQISPK*AAQTFR Trigger: CCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTG...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCACATTTCTTCTGTTGCTaGTTGGCCAACTACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLTLKTTGIGSRQPAHFFCC*LANYTA Trigger: TGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATG...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACGCCGACCAGACCATTTaGGACACCTGCCAAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHADQTI*DTCQNS Trigger: AGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGC...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGACAAAGACAAAGGCTaGCCGACCAGACCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLYFLLTLKTTGIGSRQPDKDKG*PTRPFW Trigger: CCAAAATGGTCTGGTCGGCAAGCCTTTGTCTTTGTC...AGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | GAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAGCAGCACTCTAACATaGGGAACCCTGTCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EILQTFCKCVQQCAALGVSSTLT*GTLSFA Trigger: GGCAAATGACAGGGTTCCCAATGTTAGAGTGCTGCT...GACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTTCTCTTGACTCTTAAAACCACTGGTATTGGGAGTAGGCAACCTGCAGAGTCTTCTGAGTTCTaGCTCTCATCTTTAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLTLKTTGIGSRQPAESSEF*LSSLKH Trigger: GTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTC...TGCAGGTTGCCTACTCCCAATACCAGTGGTTTTAAGAGTCAAGAGAAAGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAACAACATCCTGGACTTaGGGTCTCCTATCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GEILQTFCKCVQQCAALGTTSWT*GLLSSS Trigger: GGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGT...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACTTAGGGCTCGAAGGTTGGTGGTGTaGCTGTGTGGAGTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKNSFVIYTRQELFTLRARRLVV*LCGVSS Trigger: TGAAGAAACTCCACACAGCAACACCACCAACCTTCG...AGCCCTAAGTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACACGCCGACCAGACCATTTaGGACACCTGCCAAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRGKTPLSFIHAKNYSHADQTI*DTCQNS Trigger: AGAATTTTGGCAGGTGTCCAAAATGGTCTGGTCGGC...GTGTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGACTCCGGGCCACCATTaGTCTGTTAAATACGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTTPGHH*SVKYVL Trigger: GAGAACGTATTTAACAGACAAATGGTGGCCCGGAGT...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGTCAAAATCAGAAGGCCGGTTCTCTaGACAAAACAGTGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQTFCKCVQQCAALGVKIRRPVL*TKQCNV Trigger: CACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCT...GATTTTGACTCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGAGCAACATTTCTTCTGTaGCTTGTTGGCCAACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GEILQTFCKCVQQCAALGATFLL*LVGQLH Trigger: GTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGC...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACGCAACATTTCTTCTGTaGCTTGTTGGCCAACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHATFLL*LVGQLH Trigger: GTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGC...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGACAACATCCTGGACTTaGGGTCTCCTATCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTTTSWT*GLLSSS Trigger: GGATGAAGATAGGAGACCCAAAGTCCAGGATGTTGT...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCCAAGAACTATTCACCGGACTGAAGAAACTTaGTCTGCACACAGATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLGEEKLLCHLYTPRTIHRTEET*SAHRFR Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCAGTCCG...GTGAATAGTTCTTGGCGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGAGGAAGCTGTGCTCATaGCATCTTCAGAGAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTRKLCS*HLQRVW Trigger: CCAAACTCTCTGAAGATGCAATGAGCACAGCTTCCT...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCTGCAAACATTCTGTAAATGTGTACAGCAATGTGCTGCATTAGGATTCTTCTGTTGCTTGTaGGCCAACTACACTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GEILQTFCKCVQQCAALGFFCCL*ANYTAN Trigger: ATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAA...TCCTAATGCAGCACATTGCTGTACACATTTACAGAATGTTTGCAGAATCTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAAGCCCTTAGGAGAGGAAAAACTCCTTTGTCATTTATACACGCGCCAATTTCTACTGTaGTCTGTCACCAAAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVNIKPLGEEKLLCHLYTRQFLL*SVTKNS Trigger: GGAGTTTTTGGTGACAGACAACAGTAGAAATTGGCG...CGTGTATAAATGACAAAGGAGTTTTTCCTCTCCTAAGGGCTTGATGTTAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 72 bp | CGAGGCTCTCCAGCCTGGCGCTGGAGTGAGGGGCACTaGGGTCTGAAGGAGCGTCCTCTGGCCTGCGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGSPAWRWSEGH*GLKERPLACDA Trigger: AGCATCGCAGGCCAGAGGACGCTCCTTCAGACCTCAGTGCCCCTCACTCCAGCGCCAGGCTGGAGAGCCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CAA 72 bp | GGAGCAGGCACGTCACCTGCAGAGTGCCCAGGTGTCTaGGCAGCACAGCCTTCGAGGCTCTCCAGCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAGTSPAECPGV*AAQPSRLSSLA Trigger: CGCCAGGCTGGAGAGCCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACTCTGCAGGTGACGTGCCTGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS TCA 72 bp | CTCCAGCCTGGCGCTGGAGTGAGGGGCACTGAGGTCTaGAGGAGCGTCCTCTGGCCTGCGATGCTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQPGAGVRGTEV*RSVLWPAMLFF Trigger: GAAGAAGAGCATCGCAGGCCAGAGGACGCTCCTTCAGACCTCAGTGCCCCTCACTCCAGCGCCAGGCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS GCA 72 bp | GAGCTGTCCACTGGAGCAGGCACGTCACCTGCAGAGTaGCCAGGTGTCTTGGCAGCACAGCCTTCGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELSTGAGTSPAE*PGVLAAQPSRL Trigger: GAGCCTCGAAGGCTGTGCTGCCAAGACACCTGGGCACTCTGCAGGTGACGTGCCTGCTCCAGTGGACAGCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CCA 72 bp | ACATGTCCTGGTCTAAGGGAGTGGCCTCTGGGGAGCTaGTGCCAGCGTCTGGCCGGGACGCAGACTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TCPGLREWPLGS*CQRLAGTQTCC Trigger: ACAGCAAGTCTGCGTCCCGGCCAGACGCTGGCACCAGCTCCCCAGAGGCCACTCCCTTAGACCAGGACATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
||
| CDS CCA 72 bp | GCTCTACACCACCAGTCTCTTCGTGAGCATCCAGGCTaGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ALHHQSLREHPG*KLAGQPTARPP Trigger: AGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCCAGCCTGGATGCTCACGAAGAGACTGGTGGTGTAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS TCA 72 bp | GTCCAGCCTCCCCAAGGGTGTCAACATTTCATCTTGTaGGACGAAGTCCAGGGGTCCGTCCGCGTCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQPPQGCQHFIL*DEVQGSVRVLR Trigger: CCGGAGGACGCGGACGGACCCCTGGACTTCGTCTCACAAGATGAAATGTTGACACCCTTGGGGAGGCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160664.8 |
||
| CDS GCA 72 bp | GGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCTGTaGTGTCTTTGTCTTCTGCCGAGGAGTCTTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSSQGSRQHVHL*CLCLLPRSLLS Trigger: ACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGCACAGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS CAA 72 bp | GCAGGGCAGCCGACAGCACGTCCACCTGTGCTGTCTTaGTCTTCTGCCGAGGAGTCTTCTGAGTTCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGQPTARPPVLS*SSAEESSEFLL Trigger: GAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGCACAGGTGGACGTGCTGTCGGCTGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
||
| CDS TCA 72 bp | GTCGGATTTCTTGACATGTTGCACAGGAGACAGCCATaGAGCACTCAGCACAGGCCTTTCGGACGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VGFLDMLHRRQP*STQHRPFGRPT Trigger: TGTGGGGCGTCCGAAAGGCCTGTGCTGAGTGCTTCATGGCTGTCTCCTGTGCAACATGTCAAGAAATCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
||
| CDS CAA 72 bp | TCTGGGGCAGTCAGGTCTATGAGGACAGGGCACACCTaGGTCTCCACGTCAAATCGCTCAATCAGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGAVRSMRTGHT*VSTSNRSISSC Trigger: GCAGGAACTGATTGAGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 72 bp | CTGGTGCCAGCGTCTGGCCGGGACGCAGACTTGCTGTaGGTGTCAGGCTTTCTACCATTCTCATCATTGCTA | + |
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Preference number: 6 (lower is better) Translates to: LVPASGRDADLL*VSGFLPFSSLL Trigger: TAGCAATGATGAGAATGGTAGAAAGCCTGACACCAACAGCAAGTCTGCGTCCCGGCCAGACGCTGGCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS CAA 90 bp | TCATTGCTGTCTGGGGCAGTCAGGTCTATGAGGACAGGGCACACCTaGGTCTCCACGTCAAATCGCTCAATCAGTTCCTGCTCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLLSGAVRSMRTGHT*VSTSNRSISSCSSR Trigger: TCTGCTGGAGCAGGAACTGATTGAGCGATTTGACGTGGAGACCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 90 bp | TGGAAGCTCGCAGGGCAGCCGACAGCACGTCCACCTGTGCTGTCTTaGTCTTCTGCCGAGGAGTCTTCTGAGTTCTTGCTCTCATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: WKLAGQPTARPPVLS*SSAEESSEFLLSSL Trigger: TAAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGCACAGGTGGACGTGCTGTCGGCTGCCCTGCGAGCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| CDS GCA 72 bp | GCACTGAGGTCTGAAGGAGCGTCCTCTGGCCTGCGATaGTCTTCTTCTACGACATCATTGTCTCTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: ALRSEGASSGLR*SSSTTSLSLIL Trigger: CAGGATGAGAGACAATGATGTCGTAGAAGAAGAGCATCGCAGGCCAGAGGACGCTCCTTCAGACCTCAGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS CCA 72 bp | GCCTTTCGGACGCCCCACACGTTATCAGAGCACAGCTaGAAGAACCTGGGCAGCAACATTTCTTCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AFRTPHTLSEHS*KNLGSNISSVA Trigger: AGCAACAGAAGAAATGTTGCTGCCCAGGTTCTTCCAGCTGTGCTCTGATAACGTGTGGGGCGTCCGAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS TCA 72 bp | TCACATCATCATTGCTGTCTGGGGCAGTCAGGTCTATaGGGACAGGGCACACCTTGGTCTCCACGTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: SHHHCCLGQSGL*GQGTPWSPRQI Trigger: GATTTGACGTGGAGACCAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CCA 72 bp | AGCCACAGCTTCTGTCTTCACATCATCATTGCTGTCTaGGGCAGTCAGGTCTATGAGGACAGGGCACACCTT | + |
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Preference number: 6 (lower is better) Translates to: SHSFCLHIIIAV*GSQVYEDRAHL Trigger: AAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGAAGACAGAAGCTGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 72 bp | ATTTCTTCTAGTTCCTTCCGGGTAGCCATGGTGATATaGGGAGGGCCTGGTAGAGGGGCTGCAGGTACATCT | + |
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Preference number: 6 (lower is better) Translates to: ISSSSFRVAMVI*GGPGRGAAGTS Trigger: AGATGTACCTGCAGCCCCTCTACCAGGCCCTCCCAATATCACCATGGCTACCCGGAAGGAACTAGAAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
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| CDS CAA 90 bp | GAAGGAGCGTCCTCTGGCCTGCGATGCTCTTCTTCTACGACATCATaGTCTCTCATCCTGTCTTTGTCTTCTGCCGAGGAGTCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EGASSGLRCSSSTTS*SLILSLSSAEESSE Trigger: CTCAGAAGACTCCTCGGCAGAAGACAAAGACAGGATGAGAGACAATGATGTCGTAGAAGAAGAGCATCGCAGGCCAGAGGACGCTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS CAA 90 bp | TATAGAAGGCCGGTTCTCTTGACAAAACAGTGCAATGTGCGGCACTaGTTCCATCAGCTCCGCTCTCACAGTTGGTTCGGAGTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: YRRPVLLTKQCNVRH*FHQLRSHSWFGVIS Trigger: GCTGATGACTCCGAACCAACTGTGAGAGCGGAGCTGATGGAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 90 bp | GCCATCTTGCACATTATAGCCACAGCTTCTGTCTTCACATCATCATaGCTGTCTGGGGCAGTCAGGTCTATGAGGACAGGGCACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: AILHIIATASVFTSS*LSGAVRSMRTGHTL Trigger: CAAGGTGTGCCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGAAGACAGAAGCTGTGGCTATAATGTGCAAGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 90 bp | AGGATGAGGCGCTCCGTAATGTCCTTCCCAACCATGGGGGCCATCTaGCACATTATAGCCACAGCTTCTGTCTTCACATCATCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RMRRSVMSFPTMGAI*HIIATASVFTSSLL Trigger: CAGCAATGATGATGTGAAGACAGAAGCTGTGGCTATAATGTGCAAGATGGCCCCCATGGTTGGGAAGGACATTACGGAGCGCCTCATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS TCA 72 bp | GGATTAGCAAACGTGGATATGAAAGGCCCCAGAGACTaGAAGGCTGCTTGGCGAACCCAACGTGAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: GLANVDMKGPRD*KAAWRTQREGS Trigger: TGATCCTTCACGTTGGGTTCGCCAAGCAGCCTTTCAGTCTCTGGGGCCTTTCATATCCACGTTTGCTAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS GCA 72 bp | CCGGGCCACCATTTGTCTGTTAAATACGTTCTCACTTaGAGCATACTTGTCCAGCCTCCCCAAGGGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PGHHLSVKYVLT*SILVQPPQGCQ Trigger: TTGACACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTTAACAGACAAATGGTGGCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000161324.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 72 bp | CGCTCCGTAATGTCCTTCCCAACCATGGGGGCCATCTaGCACATTATAGCCACAGCTTCTGTCTTCACATCA | + |
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Preference number: 6 (lower is better) Translates to: RSVMSFPTMGAI*HIIATASVFTS Trigger: TGATGTGAAGACAGAAGCTGTGGCTATAATGTGCAAGATGGCCCCCATGGTTGGGAAGGACATTACGGAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 90 bp | TCAAGATCTATTTTAGGTAGAGGAGTCCTCCAGAAATGGAAGGAGTaGAACATGTCCTGGTCTAAGGGAGTGGCCTCTGGGGAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRSILGRGVLQKWKE*NMSWSKGVASGELV Trigger: CACCAGCTCCCCAGAGGCCACTCCCTTAGACCAGGACATGTTCAACTCCTTCCATTTCTGGAGGACTCCTCTACCTAAAATAGATCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
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| CDS CAA 90 bp | TTTTCTATCATTTCTTCTAGTTCCTTCCGGGTAGCCATGGTGATATaGGGAGGGCCTGGTAGAGGGGCTGCAGGTACATCTCCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FSIISSSSFRVAMVI*GGPGRGAAGTSPVL Trigger: GAGAACAGGAGATGTACCTGCAGCCCCTCTACCAGGCCCTCCCAATATCACCATGGCTACCCGGAAGGAACTAGAAGAAATGATAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
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| CDS TCA 72 bp | ACCTGTGCTGTCTTTGTCTTCTGCCGAGGAGTCTTCTaGGTTCTTGCTCTCATCTTTAAAGCACTGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: TCAVFVFCRGVF*VLALIFKALAR Trigger: TCGGGCCAGTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGCACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162109.8 |
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| CDS GCA 72 bp | CCTGTTCTCTCTGGGCTGAGTCTCTCCTCGGGGTCCTaGTGGAGCTCTTTATCAAGATCTATTTTAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PVLSGLSLSSGS*WSSLSRSILGR Trigger: TCTACCTAAAATAGATCTTGATAAAGAGCTCCAGCAGGACCCCGAGGAGAGACTCAGCCCAGAGAGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000159646.8 ENSMUST00000160664.8 |
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| CDS CAA 72 bp | CACATTATAGCCACAGCTTCTGTCTTCACATCATCATaGCTGTCTGGGGCAGTCAGGTCTATGAGGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: HIIATASVFTSS*LSGAVRSMRTG Trigger: CCCTGTCCTCATAGACCTGACTGCCCCAGACAGCAATGATGATGTGAAGACAGAAGCTGTGGCTATAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 90 bp | CGGGCCACCATTTGTCTGTTAAATACGTTCTCACTTGCAGCATACTaGTCCAGCCTCCCCAAGGGTGTCAACATTTCATCTTGTGAGACG | + |
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Preference number: 6 (lower is better) Translates to: RATICLLNTFSLAAY*SSLPKGVNISSCET Trigger: CGTCTCACAAGATGAAATGTTGACACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTTAACAGACAAATGGTGGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS TCA 72 bp | GTTCTTGCTCTCATCTTTAAAGCACTGGCCCGAGCTTaGTGGATTAGCAAACGTGGATATGAAAGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLALIFKALARA*WISKRGYERPQ Trigger: CTGGGGCCTTTCATATCCACGTTTGCTAATCCATCAAGCTCGGGCCAGTGCTTTAAAGATGAGAGCAAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS TCA 72 bp | TCTCATCCTGTCTTTGTCTTCTGCCGAGGAGTCTTCTaGGTTCTTGCTCTCATCTTTAAAGCACTGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SHPVFVFCRGVF*VLALIFKALAR Trigger: TCGGGCCAGTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGGATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS CAA 72 bp | CTGTCTTTGTCTTCTGCCGAGGAGTCTTCTGAGTTCTaGCTCTCATCTTTAAAGCACTGGCCCGAGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSLSSAEESSEF*LSSLKHWPELD Trigger: ATCAAGCTCGGGCCAGTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS CCA 72 bp | CTTGTTGGCCAACTACACTGCAAATATCTCCAAAATTaGCAGCGCAGACCTTCCGGACATGAAACATTCGAC | + |
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Preference number: 6 (lower is better) Translates to: LVGQLHCKYLQN*QRRPSGHETFD Trigger: GTCGAATGTTTCATGTCCGGAAGGTCTGCGCTGCCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS CAA 90 bp | CTGCGATGCTCTTCTTCTACGACATCATTGTCTCTCATCCTGTCTTaGTCTTCTGCCGAGGAGTCTTCTGAGTTCTTGCTCTCATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LRCSSSTTSLSLILS*SSAEESSEFLLSSL Trigger: TAAAGATGAGAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGGATGAGAGACAATGATGTCGTAGAAGAAGAGCATCGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS GCA 72 bp | GCAACATTTCTTCTGTTGCTTGTTGGCCAACTACACTaGAAATATCTCCAAAATTGGCAGCGCAGACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ATFLLLLVGQLH*KYLQNWQRRPS Trigger: GGAAGGTCTGCGCTGCCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS CCA 72 bp | GAGTCTTCTGAGTTCTTGCTCTCATCTTTAAAGCACTaGCCCGAGCTTGATGGATTAGCAAACGTGGATATG | + |
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Preference number: 6 (lower is better) Translates to: ESSEFLLSSLKH*PELDGLANVDM Trigger: CATATCCACGTTTGCTAATCCATCAAGCTCGGGCCAGTGCTTTAAAGATGAGAGCAAGAACTCAGAAGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS CAA 72 bp | CTTGGAAAAAGCATACGGTATAGAAGGCCGGTTCTCTaGACAAAACAGTGCAATGTGCGGCACTTGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LGKSIRYRRPVL*TKQCNVRHLFH Trigger: ATGGAACAAGTGCCGCACATTGCACTGTTTTGTCAAGAGAACCGGCCTTCTATACCGTATGCTTTTTCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000161127.8 ENSMUST00000162109.8 ENSMUST00000162272.2 |
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| CDS CAA 72 bp | TCTTCTTCTACGACATCATTGTCTCTCATCCTGTCTTaGTCTTCTGCCGAGGAGTCTTCTGAGTTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSTTSLSLILS*SSAEESSEFLL Trigger: GAGCAAGAACTCAGAAGACTCCTCGGCAGAAGACAAAGACAGGATGAGAGACAATGATGTCGTAGAAGAAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 |
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| CDS CAA 72 bp | ATTTGTCTGTTAAATACGTTCTCACTTGCAGCATACTaGTCCAGCCTCCCCAAGGGTGTCAACATTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: ICLLNTFSLAAY*SSLPKGVNISS Trigger: AGATGAAATGTTGACACCCTTGGGGAGGCTGGACAAGTATGCTGCAAGTGAGAACGTATTTAACAGACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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| CDS CAA 72 bp | CTGGAAGAACCTGGGCAGCAACATTTCTTCTGTTGCTaGTTGGCCAACTACACTGCAAATATCTCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LEEPGQQHFFCC*LANYTANISKI Trigger: AATTTTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGCTGCCCAGGTTCTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073104.11 ENSMUST00000160664.8 ENSMUST00000162109.8 |
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