Pregenerated sensors for PPP4C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030697Ensembl transcript IDs: ENSMUST00000032936.8, ENSMUST00000205786.2, ENSMUST00000205935.2, ENSMUST00000206334.2, ENSMUST00000206477.2, ENSMUST00000206570.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTaGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACT | + |
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Preference number: 1 (lower is better) Translates to: KPGAKAPPLQSKSAP*GKQSQAAPQTQPPT Trigger: AGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| 3UTR GCA 90 bp | GGCTGCATTGAACTGGGCGACCACGTCACTGCCAAACAGGTAACCTaGCCCGCGGGGGCTCACTCCCCAGCCTGTTGTGTCTTCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GCIELGDHVTAKQVT*PAGAHSPACCVFRV Trigger: GACCCTGAAGACACAACAGGCTGGGGAGTGAGCCCCCGCGGGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR TCA 90 bp | CTAATTGGTGGGCACGGCAGATCATATCAATGTCGTTGGCTGCATTaGACTGGGCGACCACGTCACTGCCAAACAGGTAACCTGCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: LIGGHGRSYQCRWLH*TGRPRHCQTGNLPR Trigger: GCGGGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAACGACATTGATATGATCTGCCGTGCCCACCAATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR GCA 90 bp | TCAGACCACAGGAGGTCGCACATGGGTCCATCATGGGGTACCTCTTaGTTTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTGGATGGAA | + |
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Preference number: 1 (lower is better) Translates to: SDHRRSHMGPSWGTS*FRSIVRIWSKVWME Trigger: TTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACCCATGTGCGACCTCCTGTGGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 90 bp | GGTCCATCATGGGGTACCTCTTGCTTTCGGTCAATTGTCCGGATCTaGTCCAAGGTCTGGATGGAAGGGGAAAGACCTCCATGCACACAG | + |
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Preference number: 1 (lower is better) Translates to: GPSWGTSCFRSIVRI*SKVWMEGERPPCTQ Trigger: CTGTGTGCATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTAGAGGGCAGTCACAGTaGTCCAAGGGCCAGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SAPWGKQSQAAPQTQPPTRGQSQ*SKGQRG Trigger: GCCCCTCTGGCCCTTGGACCACTGTGACTGCCCTCT...AGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| 3UTR CAA 90 bp | GGTCGCACATGGGTCCATCATGGGGTACCTCTTGCTTTCGGTCAATaGTCCGGATCTGGTCCAAGGTCTGGATGGAAGGGGAAAGACCTC | + |
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Preference number: 2 (lower is better) Translates to: GRTWVHHGVPLAFGQ*SGSGPRSGWKGKDL Trigger: GAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACCCATGTGCGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CAA 90 bp | GTCAGACCACAGGAGGTCGCACATGGGTCCATCATGGGGTACCTCTaGCTTTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTGGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: VRPQEVAHGSIMGYL*LSVNCPDLVQGLDG Trigger: TCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACCCATGTGCGACCTCCTGTGGTCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGTAGTTGGTCTCAGGGACATCGCCACCTACTCTGAACAGCTCCTTGAGTGTCACCGCATACTGTaGCTGGCGAGTCCACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EEVVGLRDIATYSEQLLECHRIL*LASPPS Trigger: AGAGGGTGGACTCGCCAGTCACAGTATGCGGTGACA...CTCAAGGAGCTGTTCAGAGTAGGTGGCGATGTCCCTGAGACCAACTACCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCACGGCAGATCATATCAATGTCGTTGGCTGCATTGAACTGGGCGACCACGATCTGGCGACTCTCATaGTTGCCCCGGATCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: WARQIISMSLAALNWATTIWRLS*LPRIKV Trigger: CACTTTGATCCGGGGCAATCATGAGAGTCGCCAGAT...CGTGGTCGCCCAGTTCAATGCAGCCAACGACATTGATATGATCTGCCGTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGACCACAGGAGGTCGCACATGGGTCCATCATGGGGTACCTCTTGCTTTCGGGGAAAGACCTCCATaGACACAGAAGATCTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GQTTGGRTWVHHGVPLAFGERPP*TQKILP Trigger: TGGCAAGATCTTCTGTGTGCATGGAGGTCTTTCCCC...GAAAGCAAGAGGTACCCCATGATGGACCCATGTGCGACCTCCTGTGGTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCAGGATAGCGAACCTTAAGAGCCAGCAGGAGGAGGAAGGTTTCAACACTACCGCATACTGTGACTaGCGAGTCCACCCTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SVRIANLKSQQEEEGFNTTAYCD*RVHPLH Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGT...AGTGTTGAAACCTTCCTCCTCCTGCTGGCTCTTAAGGTTCGCTATCCTGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCCATCACTAATTGGTGGGCACGGCAGATCATATCAATGTCGTTGGCTGGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SLPSLIGGHGRSYQCRWLGPRSG*KGKDLH Trigger: ATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACC...CAGCCAACGACATTGATATGATCTGCCGTGCCCACCAATTAGTGATGGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | GCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTaGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: AKAPPLQSKSAP*GKQSQAAPQTQ Trigger: CTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| 3UTR GCA 72 bp | GAACTGGGCGACCACGTCACTGCCAAACAGGTAACCTaGCCCGCGGGGGCTCACTCCCCAGCCTGTTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ELGDHVTAKQVT*PAGAHSPACCV Trigger: GACACAACAGGCTGGGGAGTGAGCCCCCGCGGGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCCAGTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | GGGTCAGACCACAGGAGGTCGCACATGGGTCCATCATaGGGTACCTCTTGCTTTCGGTCAATTGTCCGGATC | + |
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Preference number: 3 (lower is better) Translates to: GSDHRRSHMGPS*GTSCFRSIVRI Trigger: GATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACCCATGTGCGACCTCCTGTGGTCTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR TCA 72 bp | GGGCACGGCAGATCATATCAATGTCGTTGGCTGCATTaGACTGGGCGACCACGTCACTGCCAAACAGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GHGRSYQCRWLH*TGRPRHCQTGN Trigger: GTTACCTGTTTGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAACGACATTGATATGATCTGCCGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | TGGGGTACCTCTTGCTTTCGGTCAATTGTCCGGATCTaGTCCAAGGTCTGGATGGAAGGGGAAAGACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: WGTSCFRSIVRI*SKVWMEGERPP Trigger: TGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | TGCTTTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTaGATGGAAGGGGAAAGACCTCCATGCACACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: CFRSIVRIWSKV*MEGERPPCTQK Trigger: CTTCTGTGTGCATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | TTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCATGCACACAGAAGATCT | + |
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Preference number: 3 (lower is better) Translates to: FGQLSGSGPRSG*KGKDLHAHRRS Trigger: AGATCTTCTGTGTGCATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| 3UTR CCA 72 bp | ACAGCTGGATTTAAGAAAAGTAGAGTTAACAATGGTTaGCGCAGATACCTACCCTCACCCGGGCTCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: TAGFKKSRVNNG*RRYLPSPGLLA Trigger: GGCCAGGAGCCCGGGTGAGGGTAGGTATCTGCGCCAACCATTGTTAACTCTACTTTTCTTAAATCCAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGGAGGAGGAAGGTTTCAACACTGTAGAAACCACGGTCCACAAAGTCTCCCTTGAGGTCATAGAATaGTCCATGGATGTCACCGCA | + |
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Preference number: 3 (lower is better) Translates to: QQEEEGFNTVETTVHKVSLEVIE*SMDVTA Trigger: TGCGGTGACATCCATGGACAATTCTATGACCTCAAG...GGAGACTTTGTGGACCGTGGTTTCTACAGTGTTGAAACCTTCCTCCTCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| CDS-3UTR GCA 90 bp | CACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCCGTAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: HPGASKARQPLRPSLRLGRSCSI*RSRSLI Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTACG...GCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGGGGCGACCACGTCACTaGCAAACAGGTAACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQGRPRH*QTGNLP Trigger: GGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCC...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCGTAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: QSKSAPWGKQSQAAPQTQRSCSI*RSRSLI Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTACG...CTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | CCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTGGGCGACCACGTCACTaGCAAACAGGTAACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PPLQSKSAPWGKQSQAAPGRPRH*QTGNLP Trigger: GGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCC...AGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | ACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAACCGCATACTGTGACTaGCGAGTCCACCCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TLGQAKPGSPSDPASDWATAYCD*RVHPLH Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGT...TGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR TCA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGATCTGGCGACTCTCATaGTTGCCCCGGATCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQIWRLS*LPRIKV Trigger: CACTTTGATCCGGGGCAATCATGAGAGTCGCCAGAT...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACTCGCAGCGCCGTAGCTaGTCGATCTGCCGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERRGSQEPRLHLSRASPHSQRRS*SICRSR Trigger: CCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGA...GTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGACCGCATACTGTGACTaGCGAGTCCACCCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: QSKSAPWGKQSQAAPQTQTAYCD*RVHPLH Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGT...CTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | GTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACCACATGGGTCCATCATaGGGTACCTCTTGCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: VRTLGQAKPGSPSDPASDHMGPS*GTSCFR Trigger: CCGAAAGCAAGAGGTACCCCATGATGGACCCATGTG...GTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCACGGCCACTGGCTTTTTaGAGGGGATGCCACGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSQEPRLHLSRASPHPGARPLAF*RGCHVS Trigger: AGACACGTGGCATCCCCTCCAAAAAGCCAGTGGCCG...TGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCGGCCACTGGCTTTTTaGAGGGGATGCCACGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RASPHPGASKARQPLRPSRPLAF*RGCHVS Trigger: AGACACGTGGCATCCCCTCCAAAAAGCCAGTGGCCG...GCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR TCA 90 bp | ACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAATCTGGCGACTCTCATaGTTGCCCCGGATCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TLGQAKPGSPSDPASDWAIWRLS*LPRIKV Trigger: CACTTTGATCCGGGGCAATCATGAGAGTCGCCAGAT...TGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | GTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACGGGGAAAGACCTCCATaGACACAGAAGATCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VRTLGQAKPGSPSDPASDGERPP*TQKILP Trigger: TGGCAAGATCTTCTGTGTGCATGGAGGTCTTTCCCC...GTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | GTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACATCTGGTCCAAGGTCTaGATGGAAGGGGAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: VRTLGQAKPGSPSDPASDIWSKV*MEGERP Trigger: AGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGAT...GTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | CACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCATCTGGTCCAAGGTCTaGATGGAAGGGGAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: HPGASKARQPLRPSLRLGIWSKV*MEGERP Trigger: AGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGAT...GCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCTTGGCTGCATTGAACTaGGCGACCACGTCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRASPHPGASKARQPLRPLAALN*ATTSLP Trigger: TGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAA...GGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | CCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTTTGGCTGCATTGAACTaGGCGACCACGTCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PPLQSKSAPWGKQSQAAPLAALN*ATTSLP Trigger: TGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAA...AGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | TCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGAAATAGTCGGCCACTaGCTTTTTGGAGGGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: SAPWGKQSQAAPQTQPPTEIVGH*LFGGDA Trigger: GGCATCCCCTCCAAAAAGCCAGTGGCCGACTATTTC...AGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGCCACCCTCTGCACGTTaGTCTCTTCTACCAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQPPSAR*SLLPRF Trigger: AAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGG...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | GCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCACGTGTCTCTTGGGGTaGAGCCTCGAAGATGATGAA | + |
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Preference number: 4 (lower is better) Translates to: ASPHPGASKARQPLRPSLTCLLG*SLEDDE Trigger: TTCATCATCTTCGAGGCTGCACCCCAAGAGACACGT...GAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RASPHPGASKARQPLRPSGPRSG*KGKDLH Trigger: ATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACC...GCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGTCAATTGTCCGGATCTaGTCCAAGGTCTGGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQSIVRI*SKVWME Trigger: TTCCATCCAGACCTTGGACCAGATCCGGACAATTGA...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCCACATGGGTCCATCATaGGGTACCTCTTGCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRASPHPGASKARQPLRPHMGPS*GTSCFR Trigger: CCGAAAGCAAGAGGTACCCCATGATGGACCCATGTG...GGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAGAAATAGTCGGCCACTaGCTTTTTGGAGGGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQEPRLHLSRASPHPGAEIVGH*LFGGDA Trigger: GGCATCCCCTCCAAAAAGCCAGTGGCCGACTATTTC...TGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCTGTCACCGCATACTGTaGCTGGCGAGTCCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGEEARSQGSTSPEQVRTCHRIL*LASPPS Trigger: AGAGGGTGGACTCGCCAGTCACAGTATGCGGTGACA...GGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCAGGGGAAAGACCTCCATaGACACAGAAGATCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSQGSTSPEQVRTLGQAGERPP*TQKILP Trigger: TGGCAAGATCTTCTGTGTGCATGGAGGTCTTTCCCC...TGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | TCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCATCAATGTCGTTGGCTaGATTGAACTGGGCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRASPHPGASKARQPLRPINVVG*IELGDH Trigger: GTGGTCGCCCAGTTCAATGCAGCCAACGACATTGAT...GGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTAGATGGCTGCCACATTaGCACAGCGGTAGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLQSKSAPWGKQSQAAPRWLPH*HSGSSN Trigger: ATTACTGCTACCGCTGTGGCAATGTGGCAGCCATCT...AGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | GGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGATGGCTGCCACATTaGCACAGCGGTAGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQEPRLHLSRASPHPGARWLPH*HSGSSN Trigger: ATTACTGCTACCGCTGTGGCAATGTGGCAGCCATCT...TGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCACATCCAGTTCTAAGATaGCTGCCACATTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARSQGSTSPEQVRTLGQAHPVLR*LPHCHS Trigger: GCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATG...TGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCTCAATTGTCCGGATCTaGTCCAAGGTCTGGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RASPHPGASKARQPLRPSSIVRI*SKVWME Trigger: TTCCATCCAGACCTTGGACCAGATCCGGACAATTGA...GCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCATCAATGTCGTTGGCTaGATTGAACTGGGCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KERKPGAKAPPLQSKSAPINVVG*IELGDH Trigger: GTGGTCGCCCAGTTCAATGCAGCCAACGACATTGAT...GGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACAAATCTTTCTGGAGGTaGTCATCCAGTTCTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VRTLGQAKPGSPSDPASDKSFWR*SSSSKM Trigger: CATCTTAGAACTGGATGAGCACCTCCAGAAAGATTT...GTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGEEARSQGSTSPEQVRTGPRSG*KGKDLH Trigger: ATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACC...GGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCTCCATCACTAATTGGTaGGCACGGCAGATCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: RASPHPGASKARQPLRPSSITNW*ARQIIS Trigger: TGATATGATCTGCCGTGCCCACCAATTAGTGATGGA...GCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGGAGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGGGGCGACCACGTCACTaGCAAACAGGTAACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGGAHPVLRWLPHCHSWGRPRH*QTGNLP Trigger: GGGCAGGTTACCTGTTTGGCAGTGACGTGGTCGCCC...CCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCTCCAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCATCCAGTTCTAAGATaGCTGCCACATTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERRGSQEPRLHLSRASPHHPVLR*LPHCHS Trigger: GCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATG...GTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCACCCTCTGCACGTTaGTCTCTTCTACCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ERRGSQEPRLHLSRASPHPPSAR*SLLPRF Trigger: AAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGG...GTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGAAATCTTTCTGGAGGTaGTCATCCAGTTCTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QSKSAPWGKQSQAAPQTQKSFWR*SSSSKM Trigger: CATCTTAGAACTGGATGAGCACCTCCAGAAAGATTT...CTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCATGATGAAATCTTTCTaGAGGTGCTCATCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RASPHPGASKARQPLRPSMMKSF*RCSSSS Trigger: AGAACTGGATGAGCACCTCCAGAAAGATTTCATCAT...GCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACATCGCCACCTACTCTGAACAGCTCCTTGAGGTCATAGAATTGTCCATGGCCCAATTCCTGACCTaGCCTTGGCGCACAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDIATYSEQLLEVIELSMAQFLT*PWRTGP Trigger: AGGCCCTGTGCGCCAAGGCCAGGTCAGGAATTGGGC...CATGGACAATTCTATGACCTCAAGGAGCTGTTCAGAGTAGGTGGCGATGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCGACTCTCATGATTGCCCCGGATCAAAGTGATTCTGTCAGGATAGCGAACATGTCACCGCATACCTaGCCTTGGCGCACAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LATLMIAPDQSDSVRIANMSPHT*PWRTGP Trigger: AGGCCCTGTGCGCCAAGGCCAGGTATGCGGTGACAT...GTTCGCTATCCTGACAGAATCACTTTGATCCGGGGCAATCATGAGAGTCGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
||
| 3UTR CAA 72 bp | TGGGTCCATCATGGGGTACCTCTTGCTTTCGGTCAATaGTCCGGATCTGGTCCAAGGTCTGGATGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVHHGVPLAFGQ*SGSGPRSGWKG Trigger: CCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACCCCATGATGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACTCCATCACTAATTGGTaGGCACGGCAGATCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: ERRGSQEPRLHLSRASPHSITNW*ARQIIS Trigger: TGATATGATCTGCCGTGCCCACCAATTAGTGATGGA...GTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| 3UTR CAA 72 bp | ACTAATTGGTGGGCACGGCAGATCATATCAATGTCGTaGGCTGCATTGAACTGGGCGACCACGTCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNWWARQIISMS*AALNWATTSLP Trigger: TGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAACGACATTGATATGATCTGCCGTGCCCACCAATTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS-3UTR GCA 90 bp | CTTTCTGGAGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATCAATGTCGTTGGCTaGATTGAACTGGGCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGGAHPVLRWLPHCHSWINVVG*IELGDH Trigger: GTGGTCGCCCAGTTCAATGCAGCCAACGACATTGAT...CCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCTCCAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR GCA 90 bp | ATACAGTCACTGAACCATATTTCCGTAAGCACTCATCATAGAACCCATAGACCTTCGCAGCGCCGTAGCTaGTCGATCTGCCGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSLNHISVSTHHRTHRPSQRRS*SICRSR Trigger: CCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGA...AGGTCTATGGGTTCTATGATGAGTGCTTACGGAAATATGGTTCAGTGACTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205935.2 ENSMUST00000206334.2 |
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| CDS-3UTR GCA 90 bp | TACAGTAGCGCCATACAGTCACTGAACCATATTTCCGTAAGCACTCATCATAGACGTAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: YSSAIQSLNHISVSTHHRRSCSI*RSRSLI Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTACG...TCTATGATGAGTGCTTACGGAAATATGGTTCAGTGACTGTATGGCGCTACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS-3UTR CCA 90 bp | AGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTTAAGAGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCSSSSKMAATLPQLDLRGPRSG*KGKDLH Trigger: ATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACC...TCTTAAATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTTAAGAAAATTGGCTGCATTGAACTaGGCGACCACGTCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSKMAATLPQLDLRKLAALN*ATTSLP Trigger: TGGCAGTGACGTGGTCGCCCAGTTCAATGCAGCCAA...TTTTCTTAAATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CCA 90 bp | TTCTGGAGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTCCATCACTAATTGGTaGGCACGGCAGATCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: FWRCSSSSKMAATLPQLDSITNW*ARQIIS Trigger: TGATATGATCTGCCGTGCCCACCAATTAGTGATGGA...ATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCTCCAGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTGATTCTGTCAGGATAGCGAACCTTAAGAGCCAGCAGGAGGAGGAAGGTCTACCAAGATTTCTCTaGAGACAGGAGAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSDSVRIANLKSQQEEEGLPRFL*RQEKTR Trigger: CCTGGTCTTCTCCTGTCTCCAGAGAAATCTTGGTAG...ACCTTCCTCCTCCTGCTGGCTCTTAAGGTTCGCTATCCTGACAGAATCACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| CDS-3UTR CCA 90 bp | GCTGGATTTAAGAAAAGTAGAGTTAACAATGGTTGGCGCAGATACCTACCCTCACACATGGGTCCATCATaGGGTACCTCTTGCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFKKSRVNNGWRRYLPSHMGPS*GTSCFR Trigger: CCGAAAGCAAGAGGTACCCCATGATGGACCCATGTG...TGAGGGTAGGTATCTGCGCCAACCATTGTTAACTCTACTTTTCTTAAATCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CCA 90 bp | GCTGGATTTAAGAAAAGTAGAGTTAACAATGGTTGGCGCAGATACCTACCCTCAATCTGGTCCAAGGTCTaGATGGAAGGGGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGFKKSRVNNGWRRYLPSIWSKV*MEGERP Trigger: AGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGAT...TGAGGGTAGGTATCTGCGCCAACCATTGTTAACTCTACTTTTCTTAAATCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CCA 90 bp | TCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTTAAGAAAAGTATCAATTGTCCGGATCTaGTCCAAGGTCTGGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSKMAATLPQLDLRKVSIVRI*SKVWME Trigger: TTCCATCCAGACCTTGGACCAGATCCGGACAATTGA...TACTTTTCTTAAATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CAA 90 bp | CACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCTCGGCCACTGGCTTTTaGGAGGGGATGCCACGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPGASKARQPLRPSLRLGSATGF*EGMPRV Trigger: GACACGTGGCATCCCCTCCAAAAAGCCAGTGGCCGA...GCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQLTSLS*ISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAA...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGATGCCACGTGTCTCTaGGGGTGCAGCCTCGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLGQAKPGSPSDPASDWADATCL*GCSLED Trigger: ATCTTCGAGGCTGCACCCCAAGAGACACGTGGCATC...TGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCGATGCCACGTGTCTCTaGGGGTGCAGCCTCGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASPHPGASKARQPLRPSLDATCL*GCSLED Trigger: ATCTTCGAGGCTGCACCCCAAGAGACACGTGGCATC...GAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGCTTGCTTTCGGTCAATaGTCCGGATCTGGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQLAFGQ*SGSGPR Trigger: CCTTGGACCAGATCCGGACAATTGACCGAAAGCAAG...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SQEPRLHLSRASPHPGASLTSLS*ISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAA...GCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTCTCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTTTGGCGCACAGGGCCTaGACTTCGCTCTCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PPLQSKSAPWGKQSQAAPLAHRA*TSLSLI Trigger: GATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAA...AGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCAGTCCACCCTCTGCACGTaGCTCTCTTCTACCAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PWGKQSQAAPQTQPPTGQSTLCT*LSSTKI Trigger: AATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGA...CTGCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | CACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTGGGCCTTGAGGTCATAGAATaGTCCATGGATGTCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPGASKARQPLRPSLRLGLEVIE*SMDVTA Trigger: TGCGGTGACATCCATGGACAATTCTATGACCTCAAG...GCCCAGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCTCGGCCACTGGCTTTTaGGAGGGGATGCCACGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKGEEARSQGSTSPEQVRSATGF*EGMPRV Trigger: GACACGTGGCATCCCCTCCAAAAAGCCAGTGGCCGA...GCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCTCCACCCTCTGCACGTaGCTCTCTTCTACCAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SRASPHPGASKARQPLRPSTLCT*LSSTKI Trigger: AATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGA...GGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
||
| CDS-3UTR CAA 90 bp | TCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCCGACTCTTGAGGTCATAGAATaGTCCATGGATGTCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAPWGKQSQAAPQTQPPTLEVIE*SMDVTA Trigger: TGCGGTGACATCCATGGACAATTCTATGACCTCAAG...AGTCGGAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAGCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCATCATGGGGTACCTCTaGCTTTCGGTCAATTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SRASPHPGASKARQPLRPIMGYL*LSVNCP Trigger: CGGACAATTGACCGAAAGCAAGAGGTACCCCATGAT...GGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | GCAAGTCCGCACCCTGGGGCAAGCAAAGCCAGGCAGCCCCTCAGACCCAGCCTCATCATATCAATGTCGTaGGCTGCATTGAACTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: ASPHPGASKARQPLRPSLIISMS*AALNWA Trigger: CGCCCAGTTCAATGCAGCCAACGACATTGATATGAT...GAGGCTGGGTCTGAGGGGCTGCCTGGCTTTGCTTGCCCCAGGGTGCGGACTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | AAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCCTTGCTTTCGGTCAATaGTCCGGATCTGGTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: KGEEARSQGSTSPEQVRTLAFGQ*SGSGPR Trigger: CCTTGGACCAGATCCGGACAATTGACCGAAAGCAAG...GGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | AAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCATCATGGGGTACCTCTaGCTTTCGGTCAATTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: KGEEARSQGSTSPEQVRTIMGYL*LSVNCP Trigger: CGGACAATTGACCGAAAGCAAGAGGTACCCCATGAT...GGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | TCTTGCTTTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTGGATGGAAGGGGAAACCGCATACCTGGCCTaGGCGCACAGGGCCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: SCFRSIVRIWSKVWMEGETAYLA*AHRALT Trigger: AGTCAAGGCCCTGTGCGCCAAGGCCAGGTATGCGGT...TTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS GCA 90 bp | TGTCCATGGATGTCACCGCATACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCTTCTACCAAGATTTCTCTGGCCTTGGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: CPWMSPHTVTGESTL*TLLSSTKISLALAH Trigger: GTGCGCCAAGGCCAGAGAAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGTGACATCCATGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | AAAGGAGAGGAAGCCAGGAGCCAAGGCTCCACCTCTCCAGAGCAAGTCCGCACCATCATATCAATGTCGTaGGCTGCATTGAACTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: KGEEARSQGSTSPEQVRTIISMS*AALNWA Trigger: CGCCCAGTTCAATGCAGCCAACGACATTGATATGAT...GGTGCGGACTTGCTCTGGAGAGGTGGAGCCTTGGCTCCTGGCTTCCTCTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS-3UTR CAA 90 bp | TCTGTCAGGATAGCGAACCTTAAGAGCCAGCAGGAGGAGGAAGGTTTCAACACTATTCCTGACCTGGCCTaGGCGCACAGGGCCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: SVRIANLKSQQEEEGFNTIPDLA*AHRALT Trigger: AGTCAAGGCCCTGTGCGCCAAGGCCAGGTCAGGAAT...AGTGTTGAAACCTTCCTCCTCCTGCTGGCTCTTAAGGTTCGCTATCCTGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| CDS-3UTR CAA 90 bp | CTGGCGACTCTCATGATTGCCCCGGATCAAAGTGATTCTGTCAGGATAGCGAACTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: LATLMIAPDQSDSVRIANLTSLS*ISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAA...GTTCGCTATCCTGACAGAATCACTTTGATCCGGGGCAATCATGAGAGTCGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205935.2 ENSMUST00000206334.2 |
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| CDS CCA 90 bp | CCACGTGTCTCTTGGGGTGCAGCCTCGAAGATGATGAAATCTTTCTaGAGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: PRVSWGAASKMMKSF*RCSSSSKMAATLPQ Trigger: CTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCTCCAGAAAGATTTCATCATCTTCGAGGCTGCACCCCAAGAGACACGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032936.8 ENSMUST00000205786.2 ENSMUST00000206570.2 |
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| CDS CCA 90 bp | GGTACCTCTTGCTTTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTaGATGGAAGGGGAAAGACCTCCATGCACACAGAAGATTCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: GTSCFRSIVRIWSKV*MEGERPPCTQKILN Trigger: GTTCAGAATCTTCTGTGTGCATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205786.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTTAAGACTTGCTTTCGGTCAATaGTCCGGATCTGGTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RCSSSSKMAATLPQLDLRLAFGQ*SGSGPR Trigger: CCTTGGACCAGATCCGGACAATTGACCGAAAGCAAG...TCTTAAATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGTACAGTAGCGCCATACAGTCACTGAACCATATTTCCGTAAGCACTCATTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: SQYSSAIQSLNHISVSTHLTSLS*ISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAA...ATGAGTGCTTACGGAAATATGGTTCAGTGACTGTATGGCGCTACTGTACTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205935.2 ENSMUST00000206334.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCTCATCCAGTTCTAAGATGGCTGCCACATTGCCACAGCTGGATTTAAGAATCATGGGGTACCTCTaGCTTTCGGTCAATTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: RCSSSSKMAATLPQLDLRIMGYL*LSVNCP Trigger: CGGACAATTGACCGAAAGCAAGAGGTACCCCATGAT...TCTTAAATCCAGCTGTGGCAATGTGGCAGCCATCTTAGAACTGGATGAGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS-3UTR CAA 90 bp | TACAGTAGCGCCATACAGTCACTGAACCATATTTCCGTAAGCACTCATCATAGACTTGAGGTCATAGAATaGTCCATGGATGTCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: YSSAIQSLNHISVSTHHRLEVIE*SMDVTA Trigger: TGCGGTGACATCCATGGACAATTCTATGACCTCAAG...TCTATGATGAGTGCTTACGGAAATATGGTTCAGTGACTGTATGGCGCTACTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS-3UTR CAA 90 bp | GCTGGATTTAAGAAAAGTAGAGTTAACAATGGTTGGCGCAGATACCTACCCTCAATCATATCAATGTCGTaGGCTGCATTGAACTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: AGFKKSRVNNGWRRYLPSIISMS*AALNWA Trigger: CGCCCAGTTCAATGCAGCCAACGACATTGATATGAT...TGAGGGTAGGTATCTGCGCCAACCATTGTTAACTCTACTTTTCTTAAATCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206477.2 |
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| CDS CAA 90 bp | ACCGCATACCTGGCCTTGGCGCACAGGGCCTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGTAGCTGCTCGATCTGCCGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TAYLALAHRALTSLS*ISSQRRSCSICRSR Trigger: CCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAGGTATGCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS CAA 90 bp | ATTCCTGACCTGGCCTTGGCGCACAGGGCCTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGTAGCTGCTCGATCTGCCGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IPDLALAHRALTSLS*ISSQRRSCSICRSR Trigger: CCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAGGTCAGGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206334.2 |
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| CDS GCA 72 bp | ACTTCGCTCTCTTTGATCAGCTCGCAGCGCCGTAGCTaGTCGATCTGCCGGTCCAGGTCGCTGATCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: TSLSLISSQRRS*SICRSRSLISA Trigger: GGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032936.8 ENSMUST00000205935.2 ENSMUST00000206570.2 |
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| CDS CAA 72 bp | CTGGCCTTGGCGCACAGGGCCTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGTAGCTGCTCGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LALAHRALTSLS*ISSQRRSCSIC Trigger: GCAGATCGAGCAGCTACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032936.8 ENSMUST00000205935.2 ENSMUST00000206334.2 ENSMUST00000206570.2 |
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| CDS CAA 72 bp | GATGTCACCGCATACCTGGCCTTGGCGCACAGGGCCTaGACTTCGCTCTCTTTGATCAGCTCGCAGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: DVTAYLALAHRA*TSLSLISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAGGTATGCGGTGACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205935.2 |
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| CDS CAA 90 bp | AAGATTTCTCTGGCCTTGGCGCACAGGGCCTTGACTTCGCTCTCTTaGATCAGCTCGCAGCGCCGTAGCTGCTCGATCTGCCGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KISLALAHRALTSLS*ISSQRRSCSICRSR Trigger: CCTGGACCGGCAGATCGAGCAGCTACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAGAGAAATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS CAA 90 bp | TGGATGTCACCGCATACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCTTCTACCAAGATTTCTCTGGCCTTGGCGCACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WMSPHTVTGESTLCT*LSSTKISLALAHRA Trigger: GGCCCTGTGCGCCAAGGCCAGAGAAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGTGACATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS CAA 72 bp | TCTACCAAGATTTCTCTGGCCTTGGCGCACAGGGCCTaGACTTCGCTCTCTTTGATCAGCTCGCAGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: STKISLALAHRA*TSLSLISSQRR Trigger: ACGGCGCTGCGAGCTGATCAAAGAGAGCGAAGTCAAGGCCCTGTGCGCCAAGGCCAGAGAAATCTTGGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS CAA 72 bp | CCGCATACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCTTCTACCAAGATTTCTCTGGCCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PHTVTGESTLCT*LSSTKISLALA Trigger: CGCCAAGGCCAGAGAAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS GCA 72 bp | ATGTCACCGCATACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCTTCTACCAAGATTTCTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: MSPHTVTGESTL*TLLSSTKISLA Trigger: GGCCAGAGAAATCTTGGTAGAAGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTATGCGGTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032936.8 ENSMUST00000206570.2 |
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| CDS CCA 72 bp | GCCACTGGCTTTTTGGAGGGGATGCCACGTGTCTCTTaGGGTGCAGCCTCGAAGATGATGAAATCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATGFLEGMPRVS*GAASKMMKSFW Trigger: CCAGAAAGATTTCATCATCTTCGAGGCTGCACCCCAAGAGACACGTGGCATCCCCTCCAAAAAGCCAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032936.8 ENSMUST00000205786.2 ENSMUST00000206570.2 |
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| CDS CCA 72 bp | TTCGGTCAATTGTCCGGATCTGGTCCAAGGTCTGGATaGAAGGGGAAAGACCTCCATGCACACAGAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: FGQLSGSGPRSG*KGKDLHAHRRF Trigger: GAATCTTCTGTGTGCATGGAGGTCTTTCCCCTTCCATCCAGACCTTGGACCAGATCCGGACAATTGACCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205786.2 |
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| CDS CCA 72 bp | TCTTGGGGTGCAGCCTCGAAGATGATGAAATCTTTCTaGAGGTGCTCATCCAGTTCTAAGATGGCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SWGAASKMMKSF*RCSSSSKMAAT Trigger: TGTGGCAGCCATCTTAGAACTGGATGAGCACCTCCAGAAAGATTTCATCATCTTCGAGGCTGCACCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032936.8 ENSMUST00000205786.2 ENSMUST00000206570.2 |
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