Pregenerated sensors for PPP3R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028310Ensembl transcript IDs: ENSMUST00000029991.3
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTCTCTTTCAAGTGTTCTTTATGTCTCAGTTTGAGAAGTCTGTaGTGTGGTCTGCGCATGCGTGGTGAGGAGGGACTTGGGGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: RLSFKCSLCLSLRSL*CGLRMRGEEGLGVC Trigger: GCAGACCCCAAGTCCCTCCTCACCACGCATGCGCAGACCACACCACAGACTTCTCAAACTGAGACATAAAGAACACTTGAAAGAGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 90 bp | GCTAGCACATGGACGTCAGGTGTTCCAAGGACATCTTATACTCTATaGATTGGCAATAGTCTAAGGGGCTTCAGAGAGCTAGACACACGT | + |
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Preference number: 1 (lower is better) Translates to: ASTWTSGVPRTSYTL*IGNSLRGFRELDTR Trigger: ACGTGTGTCTAGCTCTCTGAAGCCCCTTAGACTATTGCCAATTCATAGAGTATAAGATGTCCTTGGAACACCTGACGTCCATGTGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 90 bp | ATCTCCCGTTCAGACTTCTATCCCTCAAACATACTCAGGGATTTCTaGGTGTATCCTGCTATGGAGTTCTTTGTGCCCCGAGAGAGATTA | + |
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Preference number: 1 (lower is better) Translates to: ISRSDFYPSNILRDF*VYPAMEFFVPRERL Trigger: TAATCTCTCTCGGGGCACAAAGAACTCCATAGCAGGATACACCCAGAAATCCCTGAGTATGTTTGAGGGATAGAAGTCTGAACGGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 90 bp | GGCAGGGAAGTCTGTACAGTAAACGCTTTACACATTTCTTCTCTTTaGGTCCTCAGAATAAACTTAGATGGAAAGACACACAGGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: GREVCTVNALHISSL*VLRINLDGKTHRPR Trigger: CCTCGGCCTGTGTGTCTTTCCATCTAAGTTTATTCTGAGGACCCAAAGAGAAGAAATGTGTAAAGCGTTTACTGTACAGACTTCCCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 90 bp | GTGGCTAATGGCTGTCTAATAATGGCTGTCCTCAGGAGACCTGTTTaGATGGTGTTCACCTTTCTCACTAAAATTTCCTCTCAGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: VANGCLIMAVLRRPV*MVFTFLTKISSQSQ Trigger: CTGACTCTGAGAGGAAATTTTAGTGAGAAAGGTGAACACCATCCAAACAGGTCTCCTGAGGACAGCCATTATTAGACAGCCATTAGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 90 bp | GTGAGGAGGGACTTGGGGTCTGCTCCTATCATTCATTCCCTTTCTTaGTCAGGATTCCATAGATGTCCATTTAATTTCAGAACAGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: VRRDLGSAPIIHSLS*SGFHRCPFNFRTVV Trigger: TACCACTGTTCTGAAATTAAATGGACATCTATGGAATCCTGACCAAGAAAGGGAATGAATGATAGGAGCAGACCCCAAGTCCCTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 90 bp | GAATCCATACCCTGGGCTATTTGGCTCTCAAACTGTCTTAACTATTaGGAAATGTGTTTGACTCCACTGTTACAGGGACGGTATTATTTG | + |
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Preference number: 1 (lower is better) Translates to: ESIPWAIWLSNCLNY*EMCLTPLLQGRYYL Trigger: CAAATAATACCGTCCCTGTAACAGTGGAGTCAAACACATTTCTCAATAGTTAAGACAGTTTGAGAGCCAAATAGCCCAGGGTATGGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 90 bp | TTCTCACTAAAATTTCCTCTCAGAGTCAGATATGTCAGGCTAGGATaGGAGGCTCTCTTTCAAGTGTTCTTTATGTCTCAGTTTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: FSLKFPLRVRYVRLG*EALFQVFFMSQFEK Trigger: CTTCTCAAACTGAGACATAAAGAACACTTGAAAGAGAGCCTCTCATCCTAGCCTGACATATCTGACTCTGAGAGGAAATTTTAGTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 90 bp | GGGCTATTTGGCTCTCAAACTGTCTTAACTATTGAGAAATGTGTTTaGCTCCACTGTTACAGGGACGGTATTATTTGTACAACCCAAATA | + |
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Preference number: 1 (lower is better) Translates to: GLFGSQTVLTIEKCV*LHCYRDGIICTTQI Trigger: TATTTGGGTTGTACAAATAATACCGTCCCTGTAACAGTGGAGTCAAACACATTTCTCAATAGTTAAGACAGTTTGAGAGCCAAATAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 90 bp | TTCTCAAAAGCAAACCACATTGATGTCATTAAGTTTCATTTTGCTTaGAATCTGTATTTCTCATCATCCAGAACAATGGCACTTCCGCAT | + |
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Preference number: 1 (lower is better) Translates to: FSKANHIDVIKFHFA*NLYFSSSRTMALPH Trigger: ATGCGGAAGTGCCATTGTTCTGGATGATGAGAAATACAGATTCCAAGCAAAATGAAACTTAATGACATCAATGTGGTTTGCTTTTGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGGACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGATTCTGGGGAGGATGTTaGCCTATCTGGCCAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: SKDPTVLSTLVSQIQGERFWGGC*PIWPKS Trigger: GGATTTTGGCCAGATAGGGCAACATCCTCCCCAGAA...TCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGTCCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGGACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGCTTGTTCCTTTCTGTaGTGTACTATCCAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: SKDPTVLSTLVSQIQGERACSFL*CTIQHC Trigger: GCAGTGTTGGATAGTACAGCACAGAAAGGAACAAGC...TCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGTCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAATACTCAGGGATTTCTaGGTGTATCCTGCTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SKDPTVLSTLVSQIQGERILRDF*VYPAME Trigger: CTCCATAGCAGGATACACCCAGAAATCCCTGAGTAT...TCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGTCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGACAGAATAAACTTAGATaGAAAGACACACAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: SKDPTVLSTLVSQIQGERQNKLR*KDTQAE Trigger: CTCGGCCTGTGTGTCTTTCCATCTAAGTTTATTCTG...TCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGTCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTATCTTCTCACTCCACCCGGTGGGAAAATGGACTCTCCCATTCTCTCCTTTTTCACATGAACACTaGAGCTACTTTCTGGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: ACIFSLHPVGKWTLPFSPFSHEH*SYFLVD Trigger: GTCCACCAGAAAGTAGCTTCAGTGTTCATGTGAAAA...AGGAGAGAATGGGAGAGTCCATTTTCCCACCGGGTGGAGTGAGAAGATACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAATGGGCACCTTGCCAGTAATGAAATCTGTGGATTCCCACTCCCCAAGACTCACCCGGTGGGAAAATaGACTCTCCCATTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: INGHLASNEICGFPLPKTHPVGK*TLPFSP Trigger: AGGAGAGAATGGGAGAGTCCATTTTCCCACCGGGTG...AGTCTTGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGAGGCAGCTAGGAGTAGTTAAGTaGTGTTCTTTGACTGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: TPRSFPHWSHRYRERERQLGVVK*CSLTEY Trigger: ATACTCAGTCAAAGAACACCACTTAACTACTCCTAG...CTGCCTCTCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTGAGGAGGGACTTGGGGTCTGCTCCTATCATTCATTCCCTTTCTTGGTCATACCCTGGGCTATTTaGCTCTCAAACTGTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: RGEEGLGVCSYHSFPFLVIPWAI*LSNCLN Trigger: GTTAAGACAGTTTGAGAGCCAAATAGCCCAGGGTAT...GACCAAGAAAGGGAATGAATGATAGGAGCAGACCCCAAGTCCCTCCTCACCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 90 bp | CTGAGCTCAGGCCACCGACAAGAACTAAGTGACTTGGCGAGAGAGTaGTGTAACATTTCTTGTCTAGAATCAACAAGTTCAAGCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: LSSGHRQELSDLARE*CNISCLESTSSSTS Trigger: GGAAGTGCTTGAACTTGTTGATTCTAGACAAGAAATGTTACACAACTCTCTCGCCAAGTCACTTAGTTCTTGTCGGTGGCCTGAGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 90 bp | AGGCAGGGAAGTCTGTACAGTAAACGCTTTACACATTTCTTCTCTTaGGGTCCTCAGAATAAACTTAGATGGAAAGACACACAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: RQGSLYSKRFTHFFS*GPQNKLRWKDTQAE Trigger: CTCGGCCTGTGTGTCTTTCCATCTAAGTTTATTCTGAGGACCCAAAGAGAAGAAATGTGTAAAGCGTTTACTGTACAGACTTCCCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTACCAGGTTCATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGTATGTCAGGCTAGGATaGGAGGCTCTCTTTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FLPGSCPWTRLSLSLVKLYVRLG*EALFQV Trigger: CACTTGAAAGAGAGCCTCTCATCCTAGCCTGACATA...CAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACATGAACCTGGTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCACTAAAATTTCCTCTCAGAGTCAGATATGTCAGGCTAGGATGAGAGGCGAAGCTACTTTCTGGTaGACTGAAGCACTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: FLTKISSQSQICQARMRGEATFW*TEALRQ Trigger: CTGTCTCAGTGCTTCAGTCCACCAGAAAGTAGCTTC...GCCTCTCATCCTAGCCTGACATATCTGACTCTGAGAGGAAATTTTAGTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTTTCAAGTGTTCTTTATGTCTCAGTTTGAGAAGTCTGTGGTGTGGTCTGTACTTTCTGGTGGACTaGAGCACTGAGACAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: LSFKCSLCLSLRSLWCGLYFLVD*STETES Trigger: AGATTCTGTCTCAGTGCTTCAGTCCACCAGAAAGTA...CAGACCACACCACAGACTTCTCAAACTGAGACATAAAGAACACTTGAAAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAATGGGCACCTTGCCAGTAATGAAATCTGTGGATTCCCACTCCCCAAGACTATCTGGCCAAAATCCTaGTTTTCTGAACCTCAAATG | + |
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Preference number: 2 (lower is better) Translates to: INGHLASNEICGFPLPKTIWPKS*FSEPQM Trigger: CATTTGAGGTTCAGAAAAGCAGGATTTTGGCCAGAT...AGTCTTGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTACCAGGTTCATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGAATCTGTTAAAAGTCTaGATGCCACAGGGAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: FLPGSCPWTRLSLSLVKLNLLKV*MPQGRS Trigger: ACTCCTTCCCTGTGGCATTCAGACTTTTAACAGATT...CAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACATGAACCTGGTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGAGATGAGGGCACCATTAGCTGTTTTCACATaGACACTGAAGCTACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: MSMDKIVSVTCKAEMRAPLAVFT*TLKLLS Trigger: AGAAAGTAGCTTCAGTGTTCATGTGAAAACAGCTAA...TGGTGCCCTCATCTCAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTGACTTGGCGAGAGAGTTGTGTAACATTTCTTGTCTAGAATCAACAAGTGCTAGGGACCAGATCTaGTTCTCAAAAGCAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: LSDLARELCNISCLESTSARDQI*FSKANH Trigger: GTGGTTTGCTTTTGAGAATCAGATCTGGTCCCTAGC...ACTTGTTGATTCTAGACAAGAAATGTTACACAACTCTCTCGCCAAGTCACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | AAATATCTAGCCAGATCATTTTTGTTGTCAAACCAGAAACAACTACTCAGTCCACTTGATATCAGGAAGTaGGGATCCAAGGACCCCACG | + |
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Preference number: 2 (lower is better) Translates to: KYLARSFLLSNQKQLLSPLDIRK*GSKDPT Trigger: CGTGGGGTCCTTGGATCCTCACTTCCTGATATCAAG...TGGACTGAGTAGTTGTTTCTGGTTTGACAACAAAAATGATCTGGCTAGATATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR GCA 90 bp | AAATATCTAGCCAGATCATTTTTGTTGTCAAACCAGAAACAACTACTCAGTCCATTTCTGGGTGTATCCTaGTATGGAGTTCTTTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: KYLARSFLLSNQKQLLSPFLGVS*YGVLCA Trigger: GGCACAAAGAACTCCATAGCAGGATACACCCAGAAA...TGGACTGAGTAGTTGTTTCTGGTTTGACAACAAAAATGATCTGGCTAGATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTACCAGGTTCATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGCACATTTCTTCTCTTTaGGTCCTCAGAATAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: FLPGSCPWTRLSLSLVKLHISSL*VLRINL Trigger: TAAGTTTATTCTGAGGACCCAAAGAGAAGAAATGTG...CAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACATGAACCTGGTAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR TCA 90 bp | AAATATCTAGCCAGATCATTTTTGTTGTCAAACCAGAAACAACTACTCAGTCCACCACATACACAAGCTTaGGAAAGAAAGGCAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KYLARSFLLSNQKQLLSPPHTQA*ERKAKM Trigger: CATCTTTGCCTTTCTTTCTCAAGCTTGTGTATGTGG...TGGACTGAGTAGTTGTTTCTGGTTTGACAACAAAAATGATCTGGCTAGATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR GCA 72 bp | GGTCTGCGCATGCGTGGTGAGGAGGGACTTGGGGTCTaGTCCTATCATTCATTCCCTTTCTTGGTCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: GLRMRGEEGLGV*SYHSFPFLVRI Trigger: AATCCTGACCAAGAAAGGGAATGAATGATAGGAGCAGACCCCAAGTCCCTCCTCACCACGCATGCGCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | AGGGTACGTCAGCCTGTATCTTCTCACTCCACCCGGTaGGAAAATGGACTCTCCCATTCTCTCCTACTGGGT | + |
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Preference number: 3 (lower is better) Translates to: RVRQPVSSHSTR*ENGLSHSLLLG Trigger: ACCCAGTAGGAGAGAATGGGAGAGTCCATTTTCCCACCGGGTGGAGTGAGAAGATACAGGCTGACGTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | TCTGGCCAAAATCCTGCTTTTCTGAACCTCAAATGCTaGAAAGCTGTTGTACCACACCGGGTGGGCCGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGQNPAFLNLKC*KAVVPHRVGRP Trigger: TGGCCGGCCCACCCGGTGTGGTACAACAGCTTTTCAGCATTTGAGGTTCAGAAAAGCAGGATTTTGGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | TTTGAGAAGTCTGTGGTGTGGTCTGCGCATGCGTGGTaGGGAGGGACTTGGGGTCTGCTCCTATCATTCATT | + |
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Preference number: 3 (lower is better) Translates to: FEKSVVWSAHAW*GGTWGLLLSFI Trigger: AATGAATGATAGGAGCAGACCCCAAGTCCCTCCTCACCACGCATGCGCAGACCACACCACAGACTTCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | CCCGGTGGGAAAATGGACTCTCCCATTCTCTCCTACTaGGTATTGGATGAGAGGACTCTTTCTGGGGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: PGGKMDSPILSY*VLDERTLSGED Trigger: ATCCTCCCCAGAAAGAGTCCTCTCATCCAATACCCAGTAGGAGAGAATGGGAGAGTCCATTTTCCCACCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | GGAAAATGGACTCTCCCATTCTCTCCTACTGGGTATTaGATGAGAGGACTCTTTCTGGGGAGGATGTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: GKWTLPFSPTGY*MRGLFLGRMLP Trigger: GGGCAACATCCTCCCCAGAAAGAGTCCTCTCATCCAATACCCAGTAGGAGAGAATGGGAGAGTCCATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | GGCCGGCCATGTGGTCCAGATTTAGCTGTTTTCACATaGACACTGAAGCTACTTTCTGGTGGACTGAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GRPCGPDLAVFT*TLKLLSGGLKH Trigger: GTGCTTCAGTCCACCAGAAAGTAGCTTCAGTGTTCATGTGAAAACAGCTAAATCTGGACCACATGGCCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | AACTCTGAGTTGGATGTTACAGTAGGGGAACCTTCCTaGGATAAGACAGCTCTTGGCTTCTCTGCTAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: NSELDVTVGEPS*DKTALGFSARD Trigger: GTCCCTAGCAGAGAAGCCAAGAGCTGTCTTATCCCAGGAAGGTTCCCCTACTGTAACATCCAACTCAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | AGAGGCTCTCTTTCAAGTGTTCTTTATGTCTCAGTTTaGGAAGTCTGTGGTGTGGTCTGCGCATGCGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: RGSLSSVLYVSV*EVCGVVCACVV Trigger: CACCACGCATGCGCAGACCACACCACAGACTTCTCAAACTGAGACATAAAGAACACTTGAAAGAGAGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | CACCTCAGTGTTGATCAAATGACATCACGCAAGTTATaGCAAAAGTTAGGAGCTGATTGCCCCGCCCACACC | + |
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Preference number: 3 (lower is better) Translates to: HLSVDQMTSRKL*QKLGADCPAHT Trigger: GGTGTGGGCGGGGCAATCAGCTCCTAACTTTTGTCATAACTTGCGTGATGTCATTTGATCAACACTGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | TCAGACTTCTATCCCTCAAACATACTCAGGGATTTCTaGGTGTATCCTGCTATGGAGTTCTTTGTGCCCCGA | + |
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Preference number: 3 (lower is better) Translates to: SDFYPSNILRDF*VYPAMEFFVPR Trigger: TCGGGGCACAAAGAACTCCATAGCAGGATACACCCAGAAATCCCTGAGTATGTTTGAGGGATAGAAGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | ACAGGCCGAGGTGCTCATATTCACCTAACTCATAAGTaGTGTGGCTATACTGTTCTACCTGAATCCATACCC | + |
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Preference number: 3 (lower is better) Translates to: TGRGAHIHLTHK*CGYTVLPESIP Trigger: GGGTATGGATTCAGGTAGAACAGTATAGCCACACCACTTATGAGTTAGGTGAATATGAGCACCTCGGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | GGCTTCAGAGAGCTAGACACACGTATGGGGATAAACTaGCTCCAAAACAGAACAGAGCTTGTTCCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GFRELDTRMGIN*LQNRTELVPFC Trigger: ACAGAAAGGAACAAGCTCTGTTCTGTTTTGGAGTCAGTTTATCCCCATACGTGTGTCTAGCTCTCTGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | CCCTGGGCTATTTGGCTCTCAAACTGTCTTAACTATTaGGAAATGTGTTTGACTCCACTGTTACAGGGACGG | + |
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Preference number: 3 (lower is better) Translates to: PWAIWLSNCLNY*EMCLTPLLQGR Trigger: CCGTCCCTGTAACAGTGGAGTCAAACACATTTCTCAATAGTTAAGACAGTTTGAGAGCCAAATAGCCCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR GCA 72 bp | TCCCTCAAACATACTCAGGGATTTCTGGGTGTATCCTaGTATGGAGTTCTTTGTGCCCCGAGAGAGATTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLKHTQGFLGVS*YGVLCAPREIK Trigger: TTTAATCTCTCTCGGGGCACAAAGAACTCCATAGCAGGATACACCCAGAAATCCCTGAGTATGTTTGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | AGCTGTTTTCACATGAACACTGAAGCTACTTTCTGGTaGACTGAAGCACTGAGACAGAATCTCCCGTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SCFHMNTEATFW*TEALRQNLPFR Trigger: TCTGAACGGGAGATTCTGTCTCAGTGCTTCAGTCCACCAGAAAGTAGCTTCAGTGTTCATGTGAAAACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CAA 90 bp | ATTAATGGGCACCTTGCCAGTAATGAAATCTGTGGATTCCCACTCCCCAAGACTGACTTGGCGAGAGAGTaGTGTAACATTTCTTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: INGHLASNEICGFPLPKTDLARE*CNISCL Trigger: TAGACAAGAAATGTTACACAACTCTCTCGCCAAGTC...AGTCTTGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGAGATGAGGGCACCAAAAACAGAACAGAGCTaGTTCCTTTCTGTGCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: MSMDKIVSVTCKAEMRAPKTEQS*FLSVLY Trigger: GTACAGCACAGAAAGGAACAAGCTCTGTTCTGTTTT...TGGTGCCCTCATCTCAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | TGGACGTCAGGTGTTCCAAGGACATCTTATACTCTATaGATTGGCAATAGTCTAAGGGGCTTCAGAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: WTSGVPRTSYTL*IGNSLRGFREL Trigger: TAGCTCTCTGAAGCCCCTTAGACTATTGCCAATTCATAGAGTATAAGATGTCCTTGGAACACCTGACGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | TGGACAAGATTGTCTCTGTCACTTGTAAAGCTGAGATaGGGGCACCACCTCAGTGTTGATCAAATGACATCA | + |
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Preference number: 3 (lower is better) Translates to: WTRLSLSLVKLR*GHHLSVDQMTS Trigger: TGATGTCATTTGATCAACACTGAGGTGGTGCCCTCATCTCAGCTTTACAAGTGACAGAGACAATCTTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | TTTAGCTGTTTTCACATGAACACTGAAGCTACTTTCTaGTGGACTGAAGCACTGAGACAGAATCTCCCGTTC | + |
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Preference number: 3 (lower is better) Translates to: FSCFHMNTEATF*WTEALRQNLPF Trigger: GAACGGGAGATTCTGTCTCAGTGCTTCAGTCCACCAGAAAGTAGCTTCAGTGTTCATGTGAAAACAGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | GGCTGTCTAATAATGGCTGTCCTCAGGAGACCTGTTTaGATGGTGTTCACCTTTCTCACTAAAATTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GCLIMAVLRRPV*MVFTFLTKISS Trigger: AGAGGAAATTTTAGTGAGAAAGGTGAACACCATCCAAACAGGTCTCCTGAGGACAGCCATTATTAGACAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | AAGACAGCTCTTGGCTTCTCTGCTAGGGACCAGATCTaGTTCTCAAAAGCAAACCACATTGATGTCATTAAG | + |
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Preference number: 3 (lower is better) Translates to: KTALGFSARDQI*FSKANHIDVIK Trigger: CTTAATGACATCAATGTGGTTTGCTTTTGAGAATCAGATCTGGTCCCTAGCAGAGAAGCCAAGAGCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | AAATTTCCTCTCAGAGTCAGATATGTCAGGCTAGGATaGGAGGCTCTCTTTCAAGTGTTCTTTATGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KFPLRVRYVRLG*EALFQVFFMSQ Trigger: CTGAGACATAAAGAACACTTGAAAGAGAGCCTCTCATCCTAGCCTGACATATCTGACTCTGAGAGGAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR TCA 72 bp | ACTTGTAAAGCTGAGATGAGGGCACCACCTCAGTGTTaGTCAAATGACATCACGCAAGTTATGACAAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: TCKAEMRAPPQC*SNDITQVMTKV Trigger: AACTTTTGTCATAACTTGCGTGATGTCATTTGATCAACACTGAGGTGGTGCCCTCATCTCAGCTTTACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | GACTTGGGGTCTGCTCCTATCATTCATTCCCTTTCTTaGTCAGGATTCCATAGATGTCCATTTAATTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: DLGSAPIIHSLS*SGFHRCPFNFR Trigger: TCTGAAATTAAATGGACATCTATGGAATCCTGACCAAGAAAGGGAATGAATGATAGGAGCAGACCCCAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR-3UTR CAA 90 bp | CTAAGTGACTTGGCGAGAGAGTTGTGTAACATTTCTTGTCTAGAATCAACAAGTATGAGGAACTCTGAGTaGGATGTTACAGTAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSDLARELCNISCLESTSMRNSE*DVTVGE Trigger: TTCCCCTACTGTAACATCCAACTCAGAGTTCCTCAT...ACTTGTTGATTCTAGACAAGAAATGTTACACAACTCTCTCGCCAAGTCACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CCA 72 bp | GTCTGTACAGTAAACGCTTTACACATTTCTTCTCTTTaGGTCCTCAGAATAAACTTAGATGGAAAGACACAC | + |
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Preference number: 3 (lower is better) Translates to: VCTVNALHISSL*VLRINLDGKTH Trigger: GTGTGTCTTTCCATCTAAGTTTATTCTGAGGACCCAAAGAGAAGAAATGTGTAAAGCGTTTACTGTACAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CCA 90 bp | ACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGAGGCAGCCCTTGACGCTGAACTaGGAGGTGCCCACGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPRSFPHWSHRYRERERQPLTLN*EVPTMN Trigger: GTTCATCGTGGGCACCTCCCAGTTCAGCGTCAAGGG...CTGCCTCTCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR TCA 90 bp | ACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGAGGCAGGCAGCTGCCAGTCCTTaGGGTTGTTTCCCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRSFPHWSHRYRERERQAAASP*GCFPPS Trigger: TGATGGTGGGAAACAACCTCAAGGACTGGCAGCTGC...CTGCCTCTCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR GCA 90 bp | GTATCTTCTCACTCCACCCGGTGGGAAAATGGACTCTCCCATTCTCTCCTACTGCCCACCAGCGGATTCTaGTGCAGCTCAGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSHSTRWENGLSHSLLLPTSGF*CSSGSL Trigger: GAGGCTGCCTGAGCTGCAGCAGAATCCGCTGGTGGG...CAGTAGGAGAGAATGGGAGAGTCCATTTTCCCACCGGGTGGAGTGAGAAGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CCA 90 bp | ACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGAGGCAGACGACCAATTTCTTGTaGATCTCCATGGTCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TPRSFPHWSHRYRERERQTTNFL*ISMVLT Trigger: GGTCAAGACCATGGAGATCCACAAGAAATTGGTCGT...CTGCCTCTCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR TCA 90 bp | CCCATTCTCTCCTACTGGGTATTGGATGAGAGGACTCTTTCTGGGGAGGATGTTCCAAGTCCAGCTTCCTaGAGCTTTTACCCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PILSYWVLDERTLSGEDVPSPAS*SFYPAF Trigger: GAAGGCTGGGTAAAAGCTTCAGGAAGCTGGACTTGG...AACATCCTCCCCAGAAAGAGTCCTCTCATCCAATACCCAGTAGGAGAGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR GCA 90 bp | GAGAGGACTCTTTCTGGGGAGGATGTTGCCCTATCTGGCCAAAATCCTGCTTTTTATCCAGGACCAAGATaGTCTTGTCCACCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTLSGEDVALSGQNPAFYPGPR*SCPPAA Trigger: AGCAGCTGGTGGACAAGAGCATCTTGGTCCTGGATA...AAAAGCAGGATTTTGGCCAGATAGGGCAACATCCTCCCCAGAAAGAGTCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CCA 90 bp | ATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGAGATGAGGGCACCACCCACGATGAACTCGTaGAAGTCCACTTCCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSMDKIVSVTCKAEMRAPPTMNS*KSTSPL Trigger: CAACGGGGAAGTGGACTTCCACGAGTTCATCGTGGG...TGGTGCCCTCATCTCAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR GCA 90 bp | CTAACTCATAAGTGGTGTGGCTATACTGTTCTACCTGAATCCATACCCTGGGCTACCAGCTGCTGCAGCTaGCAGTCCTTGAGGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTHKWCGYTVLPESIPWATSCCS*QSLRLF Trigger: AAACAACCTCAAGGACTGGCAGCTGCAGCAGCTGGT...AGCCCAGGGTATGGATTCAGGTAGAACAGTATAGCCACACCACTTATGAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | GAGAGGCTCTCTTTCAAGTGTTCTTTATGTCTCAGTTaGAGAAGTCTGTGGTGTGGTCTGCGCATGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERLSFKCSLCLS*RSLWCGLRMRG Trigger: ACCACGCATGCGCAGACCACACCACAGACTTCTCAAACTGAGACATAAAGAACACTTGAAAGAGAGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR GCA 90 bp | TTCTTACCAGGTTCATGTCCATGGACAAGATTGTCTCTGTCACTTGTAAAGCTGCCTGGTCGAAGTGGTTaGACAGCTCAGTTTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPGSCPWTRLSLSLVKLPGRSG*TAQFGS Trigger: GCTACCAAACTGAGCTGTGCAACCACTTCGACCAGG...CAGCTTTACAAGTGACAGAGACAATCTTGTCCATGGACATGAACCTGGTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | CTGCTGAGCTCAGGCCACCGACAAGAACTAAGTGACTaGGCGAGAGAGTTGTGTAACATTTCTTGTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSGHRQELSD*ARELCNISCLE Trigger: TTCTAGACAAGAAATGTTACACAACTCTCTCGCCAAGTCACTTAGTTCTTGTCGGTGGCCTGAGCTCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAGCTAGACACACGTATGGGGATAAACTGACTCCAAAACAGAACAGAGCTCCCCATTGGAGATaGAGCCATCATTATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQRARHTYGDKLTPKQNRAPHWR*SHHYPC Trigger: ACATGGATAATGATGGCTTCATCTCCAATGGGGAGC...TCTGTTCTGTTTTGGAGTCAGTTTATCCCCATACGTGTGTCTAGCTCTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | GGCCACCGACAAGAACTAAGTGACTTGGCGAGAGAGTaGTGTAACATTTCTTGTCTAGAATCAACAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHRQELSDLARE*CNISCLESTSS Trigger: TGAACTTGTTGATTCTAGACAAGAAATGTTACACAACTCTCTCGCCAAGTCACTTAGTTCTTGTCGGTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | ATATTTAAAGTTTTGGCCTTGGGATTAATGGGCACCTaGCCAGTAATGAAATCTGTGGATTCCCACTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFKVLALGLMGT*PVMKSVDSHSP Trigger: TGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAATCCCAAGGCCAAAACTTTAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | AGTCTGTACAGTAAACGCTTTACACATTTCTTCTCTTaGGGTCCTCAGAATAAACTTAGATGGAAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: SLYSKRFTHFFS*GPQNKLRWKDT Trigger: TGTGTCTTTCCATCTAAGTTTATTCTGAGGACCCAAAGAGAAGAAATGTGTAAAGCGTTTACTGTACAGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| 3UTR CAA 72 bp | ATACATTTCCCCAAATATCTAGCCAGATCATTTTTGTaGTCAAACCAGAAACAACTACTCAGTCCAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFPKYLARSFL*SNQKQLLSPKF Trigger: AAACTTTGGACTGAGTAGTTGTTTCTGGTTTGACAACAAAAATGATCTGGCTAGATATTTGGGGAAATGTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | ACCCCACGGTCCTTTCCACACTGGTCTCACAGATACAGGGAGAGAGAGAGGCAGAAGTCCACTTCCCCGTaGCCGTCTGTGTCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TPRSFPHWSHRYRERERQKSTSP*PSVSKM Trigger: CATCTTCGACACAGACGGCAACGGGGAAGTGGACTT...CTGCCTCTCTCTCTCCCTGTATCTGTGAGACCAGTGTGGAAAGGACCGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS CCA 90 bp | AAGGCGAACCTTAGCTTCTGCTCTTCATCACCCTTGACGCTGAACTaGGAGGTGCCCACGATGAACTCGTGGAAGTCCACTTCCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KANLSFCSSSPLTLN*EVPTMNSWKSTSPL Trigger: CAACGGGGAAGTGGACTTCCACGAGTTCATCGTGGGCACCTCCCAGTTCAGCGTCAAGGGTGATGAAGAGCAGAAGCTAAGGTTCGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS GCA 90 bp | CCATCGCCATCCTTATCCAGGACCAAGATGCTCTTGTCCACCAGCTaGTGCAGCTGCCAGTCCTTGAGGTTGTTTCCCACCATCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSPSLSRTKMLLSTS*CSCQSLRLFPTIIL Trigger: TAAGATGATGGTGGGAAACAACCTCAAGGACTGGCAGCTGCAGCAGCTGGTGGACAAGAGCATCTTGGTCCTGGATAAGGATGGCGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | TTAATGGGCACCTTGCCAGTAATGAAATCTGTGGATTCCCACTCCCCAAGACTACTCAGGGAGCCCGATTaGTCCAAGTCCAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMGTLPVMKSVDSHSPRLLREPD*SKSSFL Trigger: CAGGAAGCTGGACTTGGACAAATCGGGCTCCCTGAG...TAGTCTTGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS TCA 90 bp | ACTCTTCTATGCTCAGGGAGCCCGATTTGTCCAAGTCCAGCTTCCTaGAGCTTTTACCCAGCCTTCTTATCTCTTCCTGGTCGAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLCSGSPICPSPAS*SFYPAFLSLPGRSG Trigger: ACCACTTCGACCAGGAAGAGATAAGAAGGCTGGGTAAAAGCTTCAGGAAGCTGGACTTGGACAAATCGGGCTCCCTGAGCATAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGAGAGCTAGACACACGTATGGGGATAAACTGACTCCAAAACAGAACAGATGCTCTTCATCACCCTaGACGCTGAACTGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQRARHTYGDKLTPKQNRCSSSP*TLNWEV Trigger: CACCTCCCAGTTCAGCGTCAAGGGTGATGAAGAGCA...TCTGTTCTGTTTTGGAGTCAGTTTATCCCCATACGTGTGTCTAGCTCTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | ATTAATGGGCACCTTGCCAGTAATGAAATCTGTGGATTCCCACTCCCCAAGACTTGGAAGAGCTCCCCATaGGAGATGAAGCCATCATTA | + |
|
Preference number: 5 (lower is better) Translates to: INGHLASNEICGFPLPKTWKSSP*EMKPSL Trigger: TAATGATGGCTTCATCTCCAATGGGGAGCTCTTCCA...AGTCTTGGGGAGTGGGAATCCACAGATTTCATTACTGGCAAGGTGCCCATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | CTGAGTATGTGCAGTAATTGTTTATTTCACTGTGTCAGTATTTGGAGTCTCAGGTGCAGCTGCCAGTCCTaGAGGTTGTTTCCCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSMCSNCLFHCVSIWSLRCSCQS*RLFPTI Trigger: GATGGTGGGAAACAACCTCAAGGACTGGCAGCTGCA...CCTGAGACTCCAAATACTGACACAGTGAAATAAACAATTACTGCACATACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | CTAACTCATAAGTGGTGTGGCTATACTGTTCTACCTGAATCCATACCCTGGGCTAACACGACCAATTTCTaGTGGATCTCCATGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTHKWCGYTVLPESIPWANTTNF*WISMVL Trigger: CAAGACCATGGAGATCCACAAGAAATTGGTCGTGTT...AGCCCAGGGTATGGATTCAGGTAGAACAGTATAGCCACACCACTTATGAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCACTAAAATTTCCTCTCAGAGTCAGATATGTCAGGCTAGGATGAGAGGCTGCCAGTCCTTGAGGTaGTTTCCCACCATCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLTKISSQSQICQARMRGCQSLR*FPTIIL Trigger: TAAGATGATGGTGGGAAACAACCTCAAGGACTGGCA...GCCTCTCATCCTAGCCTGACATATCTGACTCTGAGAGGAAATTTTAGTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS CCA 72 bp | TTGACGCTGAACTGGGAGGTGCCCACGATGAACTCGTaGAAGTCCACTTCCCCGTTGCCGTCTGTGTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTLNWEVPTMNS*KSTSPLPSVSK Trigger: CTTCGACACAGACGGCAACGGGGAAGTGGACTTCCACGAGTTCATCGTGGGCACCTCCCAGTTCAGCGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS CAA 72 bp | CTGAAGGCGAACCTTAGCTTCTGCTCTTCATCACCCTaGACGCTGAACTGGGAGGTGCCCACGATGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LKANLSFCSSSP*TLNWEVPTMNS Trigger: CGAGTTCATCGTGGGCACCTCCCAGTTCAGCGTCAAGGGTGATGAAGAGCAGAAGCTAAGGTTCGCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS CCA 72 bp | CTTAGCTTCTGCTCTTCATCACCCTTGACGCTGAACTaGGAGGTGCCCACGATGAACTCGTGGAAGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSFCSSSPLTLN*EVPTMNSWKST Trigger: AGTGGACTTCCACGAGTTCATCGTGGGCACCTCCCAGTTCAGCGTCAAGGGTGATGAAGAGCAGAAGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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| CDS GCA 72 bp | TACCCAGCCTTCTTATCTCTTCCTGGTCGAAGTGGTTaGACAGCTCAGTTTGGTAGCTGGCCTCATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: YPAFLSLPGRSG*TAQFGSWPHFP Trigger: TGGGAAATGAGGCCAGCTACCAAACTGAGCTGTGCAACCACTTCGACCAGGAAGAGATAAGAAGGCTGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029991.3 |
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