Pregenerated sensors for PPP3CB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021816Ensembl transcript IDs: ENSMUST00000022355.11, ENSMUST00000159027.8, ENSMUST00000161445.8, ENSMUST00000161989.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTaGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: STGNCPKPLAHCSPL*QRLPNLIDGTSPRA Trigger: GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR TCA 90 bp | ACAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATaGGGGAAGCAGGCCACCAAAGTAAAGGGAAATACCAAACTACAG | + |
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Preference number: 1 (lower is better) Translates to: TDGSAAWCYELYSRA*GKQATKVKGNTKLQ Trigger: CTGTAGTTTGGTATTTCCCTTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR TCA 90 bp | CTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATaGGCTGTACTCCAGGGCATGAGGGAAGCAGGCCACCAAAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: LSGKQNNRWFRCLVL*AVLQGMREAGHQSK Trigger: TTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR GCA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTaGTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCTTATAGA | + |
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Preference number: 1 (lower is better) Translates to: NGGVDILHWKLPQAP*SLLSSVAAITQSYR Trigger: TCTATAAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR CCA 90 bp | TCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAAGCACAATaGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SSLHPGRGHGSQKAQ*FLQRDYDIYHHLGQ Trigger: TTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTGTGCTTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR CCA 90 bp | GGAAATCTCATTTGTAAACGTAAATGTGTGAACCACAAGCATAAATaGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: GNLICKRKCVNHKHK*RCRYPPLEIAPSPL Trigger: CAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACGTTTACAAATGAGATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR GCA 90 bp | ACTGAACCAAGTGCAGCAACAAATGCAGCAAACCTAAAATCAAGGTaGTACAAAGTTGCTTCTACATCAAAAGACAGACAAGCGTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: TEPSAATNAANLKSR*YKVASTSKDRQASD Trigger: ATCAGACGCTTGTCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGCATTTGTTGCTGCACTTGGTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| 3UTR TCA 90 bp | TTTACATATAGTACTAGGTGTAGAACCTGGAGCTTTGCACATGACTaGCAAGCACCCTACCACTCCAATATTATATTATATTTTGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: FTYSTRCRTWSFAHD*QAPYHSNIILYFGK Trigger: TTTTCCAAAATATAATATAATATTGGAGTGGTAGGGTGCTTGTCAGTCATGTGCAAAGCTCCAGGTTCTACACCTAGTACTATATGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCTTGCCCCAAGCCCCTTaGTCACTGCTCTCCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSLPQAP*SLLSSV Trigger: CACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAA...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGTTGGGGCCCAAGATGTaGGAGTCCCTGGGAAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMLGPKM*ESLGSR Trigger: GCGGCTTCCCAGGGACTCTCACATCTTGGGCCCCAA...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCACCCCTCCAGCTCCTTaGAGTGATCTGTCCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSTPPAP*SDLSIW Trigger: CCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGT...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGAAGCCCCTTGCTCACTaGTCTCCTCTGTGGCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMKPLAH*SPLWQR Trigger: TCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTT...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTTTGCCCCAAGCCCCTTaGTCACTGCTCTCCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TGCTFWQTKQQMVPLPGALPQAP*SLLSSV Trigger: CACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAA...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGTCCAGCTCCTTGAAGTaGTCTGTCCATTTGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NGGVDILHWKLPQAPCSLSSSLK*SVHLGP Trigger: GGGCCCCAAATGGACAGATCACTTCAAGGAGCTGGA...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGTCCTCCACTGGAAATTaGCCCAAGCCCCTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMSSTGN*PKPLAH Trigger: GTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGA...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATTGGGGCCCAAGATGTaGGAGTCCCTGGGAAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: KMIQSQQQITLVVFKATGLGPKM*ESLGSR Trigger: GCGGCTTCCCAGGGACTCTCACATCTTGGGCCCCAA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTCACTGCTCTCCTCTGTaGCAGCGATTACCCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: TGCTFWQTKQQMVPLPGAHCSPL*QRLPNL Trigger: AAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTG...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCAACCACAAGCATAAATaGAGGTGTAGATATCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSNHKHK*RCRYPP Trigger: TGGAGGATATCTACACCTCCATTTATGCTTGTGGTT...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATTGCCCCAAGCCCCTTaGTCACTGCTCTCCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KMIQSQQQITLVVFKATGLPQAP*SLLSSV Trigger: CACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATTTGGGGCCCAAGATGTaGGAGTCCCTGGGAAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: KRTIASRLHYLVKNISRHLGPKM*ESLGSR Trigger: GCGGCTTCCCAGGGACTCTCACATCTTGGGCCCCAA...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTAGCAGCAAATCACCCTaGTGGTTTTTAAAGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: TGCTFWQTKQQMVPLPGASSKSP*WFLKQL Trigger: CAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCT...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGTCTTCAGAGAGATTATaGCATTTATCATCACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NGGVDILHWKLPQAPCSLSSERL*HLSSPW Trigger: CCAAGGTGATGATAAATGTCATAATCTCTCTGAAGA...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGTCTTCAGAGAGATTATaGCATTTATCATCACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMSSERL*HLSSPW Trigger: CCAAGGTGATGATAAATGTCATAATCTCTCTGAAGA...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTGTAAACGTAAATGTGTaGACCACAAGCATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: TGCTFWQTKQQMVPLPGAVNVNV*TTSING Trigger: TCCATTTATGCTTGTGGTTCACACATTTACGTTTAC...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAACACTGCTCTCCTCTGTaGCAGCGATTACCCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEHCSPL*QRLPNL Trigger: AAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTG...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGAGTAGATATCCTCCACTaGAAATTGCCCCAAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KMIQSQQQITLVVFKATGVDILH*KLPQAP Trigger: AGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTAC...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCAGTGATCTGTCCATTTaGGGCCCAAGATGTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLSDLSI*GPRCES Trigger: ACTCTCACATCTTGGGCCCCAAATGGACAGATCACT...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCCATTTATCATCACCTTaGTCAACCCCTCCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GLKRTIASRLHYLVKNISHLSSP*STPPAP Trigger: AGGAGCTGGAGGGGTTGACCAAGGTGATGATAAATG...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGAGGCAAAGCAAGCTACTATTAGTATTTTGGCTTATTGCTAAAATACCCAGTGATCTGTCCATTTaGGGCCCAAGATGTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QRRQSKLLLVFWLIAKIPSDLSI*GPRCES Trigger: ACTCTCACATCTTGGGCCCCAAATGGACAGATCACT...GGGTATTTTAGCAATAAGCCAAAATACTAATAGTAGCTTGCTTTGCCTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATCACTGCTCTCCTCTGTaGCAGCGATTACCCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: KRTIASRLHYLVKNISRHHCSPL*QRLPNL Trigger: AAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTG...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATGTAGATATCCTCCACTaGAAATTGCCCCAAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KRTIASRLHYLVKNISRHVDILH*KLPQAP Trigger: AGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTAC...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATAGTGATCTGTCCATTTaGGGCCCAAGATGTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KRTIASRLHYLVKNISRHSDLSI*GPRCES Trigger: ACTCTCACATCTTGGGCCCCAAATGGACAGATCACT...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATCATTTATCATCACCTTaGTCAACCCCTCCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KRTIASRLHYLVKNISRHHLSSP*STPPAP Trigger: AGGAGCTGGAGGGGTTGACCAAGGTGATGATAAATG...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGCAAATCACCCTGGTaGTTTTTAAAGCAACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLKRTIASRLHYLVKNISSKSPW*FLKQLE Trigger: CTCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCT...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGCAGCAAATCACCCTaGTGGTTTTTAAAGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: GLKRTIASRLHYLVKNISSSKSP*WFLKQL Trigger: CAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCT...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAGAAAGCAGCTATATCTaGAGAGGAAGGAAACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: AANLKSRCYKVASTSKDRESSYI*RGRKQH Trigger: ATGCTGTTTCCTTCCTCTGCAGATATAGCTGCTTTC...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGACCCCATATCACCTTATaGAAATCTGGGAAACTGATT | + |
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Preference number: 2 (lower is better) Translates to: AANLKSRCYKVASTSKDRPHITL*KSGKLI Trigger: AATCAGTTTCCCAGATTTTCATAAGGTGATATGGGG...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGACCTGATTCACATTCTTaGCTGAGGCTTTTGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: AANLKSRCYKVASTSKDRPDSHS*LRLLKE Trigger: TTCTTTCAAAAGCCTCAGTCAAGAATGTGAATCAGG...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGAGGCAAAGCAAGCTACTATTAGTATTTTGGCTTATTGCTAAAATACCCGTAAACGTAAATGTGTaGACCACAAGCATAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: QRRQSKLLLVFWLIAKIPVNVNV*TTSING Trigger: TCCATTTATGCTTGTGGTTCACACATTTACGTTTAC...GGGTATTTTAGCAATAAGCCAAAATACTAATAGTAGCTTGCTTTGCCTCCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCATCCTCCACTGGAAATaGCCCCAAGCCCCTTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSILHWK*PQAPCS Trigger: TGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGAT...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCACATTTATCATCACCTaGGTCAACCCCTCCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSTFIIT*VNPSSS Trigger: GGAGCTGGAGGGGTTGACCAAGGTGATGATAAATGT...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| 3UTR TCA 72 bp | TCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATaGGGGAAGCAGGCCACCAAAGTAAAGGGAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: SAAWCYELYSRA*GKQATKVKGNT Trigger: GGTATTTCCCTTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGATTGCCCCAAGCCCCTaGCTCACTGCTCTCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMIAPSP*LTALLC Trigger: ACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR TCA 72 bp | AAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATaGGCTGTACTCCAGGGCATGAGGGAAGCAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KQNNRWFRCLVL*AVLQGMREAGH Trigger: GTGGCCTGCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATCCTCCACTGGAAATaGCCCCAAGCCCCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGCTFWQTKQQMVPLPGAILHWK*PQAPCS Trigger: TGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGAT...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR GCA 72 bp | TCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTaGTCTCCTCTGTGGCAGCGATTACCCAATCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: SSTGNCPKPLAH*SPLWQRLPNLI Trigger: TATAAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR CCA 72 bp | AATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTaGCAGCGATTACCCAATCTTATAGACGGCACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NCPKPLAHCSPL*QRLPNLIDGTS Trigger: ACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGACATTTATCATCACCTaGGTCAACCCCTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NGGVDILHWKLPQAPCSLTFIIT*VNPSSS Trigger: GGAGCTGGAGGGGTTGACCAAGGTGATGATAAATGT...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTACATTTATCATCACCTaGGTCAACCCCTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TGCTFWQTKQQMVPLPGATFIIT*VNPSSS Trigger: GGAGCTGGAGGGGTTGACCAAGGTGATGATAAATGT...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR TCA 72 bp | CATTTATCATCACCTTGGTCAACCCCTCCAGCTCCTTaGAGTGATCTGTCCATTTGGGGCCCAAGATGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLSSPWSTPPAP*SDLSIWGPRCE Trigger: CTCACATCTTGGGCCCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTaGCTCACTGCTCTCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEIAPSP*LTALLC Trigger: ACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTCGTAACCTATACATGTaGTACCTGTACATCATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGCTFWQTKQQMVPLPGARNLYM*YLYIIG Trigger: ACCTATGATGTACAGGTACAACATGTATAGGTTACG...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGCGTAACCTATACATGTaGTACCTGTACATCATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMRNLYM*YLYIIG Trigger: ACCTATGATGTACAGGTACAACATGTATAGGTTACG...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR CCA 72 bp | CATCCAGGAAGGGGGCACGGATCTCAGAAAGCACAATaGTTTCTTCAGAGAGATTATGACATTTATCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: HPGRGHGSQKAQ*FLQRDYDIYHH Trigger: GTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTGTGCTTTCTGAGATCCGTGCCCCCTTCCTGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR CCA 72 bp | ATTTGTAAACGTAAATGTGTGAACCACAAGCATAAATaGAGGTGTAGATATCCTCCACTGGAAATTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ICKRKCVNHKHK*RCRYPPLEIAP Trigger: TGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACGTTTACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR GCA 72 bp | AGTGCAGCAACAAATGCAGCAAACCTAAAATCAAGGTaGTACAAAGTTGCTTCTACATCAAAAGACAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: SAATNAANLKSR*YKVASTSKDRQ Trigger: TTGTCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGCATTTGTTGCTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCTCAGATGTCAGCCGATaGGTTGGGGGAAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSSDVSR*VGGKGT Trigger: TGTTCCTTTTCCCCCAACTCATCGGCTGACATCTGA...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAAACTGGGCACTATGGTTaGCAGTCCCGTGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQTGHYG*QSRGSQ Trigger: CTGAGAACCACGGGACTGGCAACCATAGTGCCCAGT...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATGGTTGCCAGTCCCGTaGTTCTCAGTGGTATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQWLPVP*FSVVCA Trigger: CGCACATACCACTGAGAACCACGGGACTGGCAACCA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATTTCCGGGCTGCAGCTaGACCTACATCAAACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQFPGCS*TYIKLV Trigger: GACCAGTTTGATGTAGGTTCAGCTGCAGCCCGGAAA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCAGGGCCCTCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAATTGCCTCTTCAAAACTaGAGATTCTATGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPGPSSLHPGRGHGSQKLPLQN*RFYVVE Trigger: CTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAA...TTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGAGGGCCCTGGGACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCAGGGCCCTCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAACCTATCCAAACCCTTTaGCTCTTCAAAACTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVPGPSSLHPGRGHGSQKPIQTL*LFKTAD Trigger: ATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGG...TTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGAGGGCCCTGGGACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCGAATTGAAACCATCTTaGTGCACAGCATCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSELKPS*CTASFR Trigger: CCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTC...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTACTGGGCACTATGGTTaGCAGTCCCGTGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGCTFWQTKQQMVPLPGATGHYG*QSRGSQ Trigger: CTGAGAACCACGGGACTGGCAACCATAGTGCCCAGT...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCAGGGCCCTCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAACTTCTACTTCTATCATaGTTTTCTCCCGCCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVPGPSSLHPGRGHGSQKLLLLS*FSPAEV Trigger: TACTTCGGCGGGAGAAAACCATGATAGAAGTAGAAG...TTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGAGGGCCCTGGGACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCGCAGATTCTATGTGGTaGAGAGAATCCTCGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSADSMW*RESSYC Trigger: GCAATACGAGGATTCTCTCCACCACATAGAATCTGC...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGTGGTTGCCAGTCCCGTaGTTCTCAGTGGTATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMWLPVP*FSVVCA Trigger: CGCACATACCACTGAGAACCACGGGACTGGCAACCA...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCAGGGCCCTCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAAACACATTGGTCCAAATaGAGGTGGCTCTTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPGPSSLHPGRGHGSQKTHWSK*RWLFKS Trigger: AGATTTAAAGAGCCACCTGCATTTGGACCAATGTGT...TTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGAGGGCCCTGGGACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGALCKV*RPPANT Trigger: AGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTTCCGCTGCCTGGTGCTATGAGCTGTACTCCAGGGCATGAGGGAAGCTTGCCTCTTCAAAACTaGAGATTCTATGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMVPLPGAMSCTPGHEGSLPLQN*RFYVVE Trigger: CTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAA...GCTTCCCTCATGCCCTGGAGTACAGCTCATAGCACCAGGCAGCGGAACCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTGTGGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCCTTGAAACCATCTTGCTaGACAGCATCTTTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLWQRLPNLIDGTSPRALKPSC*TASFRG Trigger: ACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAA...GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATGTCAGCCGATGAGTTaGGGGAAAAGGAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQCQPMS*GKRNSF Trigger: AAAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGTTTCCGGGCTGCAGCTaGACCTACATCAAACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGFPGCS*TYIKLV Trigger: GACCAGTTTGATGTAGGTTCAGCTGCAGCCCGGAAA...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 |
||
| CDS-3UTR GCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAAGTTCTCAGTGGTATGTaGGGTGTTCAGGGAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQVLSGM*GVQGIE Trigger: TTCAATTCCCTGAACACCGCACATACCACTGAGAAC...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| 3UTR CAA 72 bp | AGCATAAATGGAGGTGTAGATATCCTCCACTGGAAATaGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SINGGVDILHWK*PQAPCSLLSSV Trigger: CACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATTTATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGTCAGATGTCAGCCGATaGGTTGGGGGAAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGSDVSR*VGGKGT Trigger: TGTTCCTTTTCCCCCAACTCATCGGCTGACATCTGA...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATGTGTGTATTTCTGGTaGAAGTCCACCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQCVYFW*KSTMNT Trigger: TGTGTTCATGGTGGACTTTCACCAGAAATACACACA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCAGGGCCCTCAAGCCTCCATCCAGGAAGGGGGCACGGATCTCAGAAATCAGAAGGAATAATGTaGTTGGGTATAGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPGPSSLHPGRGHGSQKSEGIM*LGIESS Trigger: TGAAGATTCTATACCCAAGCACATTATTCCTTCTGA...TTTCTGAGATCCGTGCCCCCTTCCTGGATGGAGGCTTGAGGGCCCTGGGACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTGTGGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCCGTCTGCATTCATGGTTaGCTCTCAGAAGGAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: SPLWQRLPNLIDGTSPRAVCIHG*LSEGIM Trigger: CATTATTCCTTCTGAGAGGCAACCATGAATGCAGAC...GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTGTGGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCCGTACATTCTATAGCCTaGATCTTGAGCTTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLWQRLPNLIDGTSPRAVHSIA*ILSFMS Trigger: GCTCATGAAGCTCAAGATGCAGGCTATAGAATGTAC...GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTGTGGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCCCCTATCCAAACCCTTTaGCTCTTCAAAACTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLWQRLPNLIDGTSPRAPIQTL*LFKTAD Trigger: ATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGG...GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGTGTCAGCCGATGAGTTaGGGGAAAAGGAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGGVDILHWKLPQAPCSLCQPMS*GKRNSF Trigger: AAAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACA...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCCCTTCTTTTACCAAGTaGTTCTTCAGAACATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: IAPSPLLTALLCGSDYPIPSFTK*FFRTST Trigger: GGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGG...GATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGGTGGCATTCTCTCATTaGTCCTATCCAAACCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGGVDILHWKLPQAPCSLVAFSH*SYPNPL Trigger: CAAAGGGTTTGGATAGGATCAATGAGAGAATGCCAC...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGGAATTGAAACCATCTTaGTGCACAGCATCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMELKPS*CTASFR Trigger: CCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTC...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGAGGTGTCTGCATTCATaGTTGCCTCTCAGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMRCLHS*LPLRRN Trigger: ATTCCTTCTGAGAGGCAACCATGAATGCAGACACCT...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTAGGTGTCTGCATTCATaGTTGCCTCTCAGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGCTFWQTKQQMVPLPGARCLHS*LPLRRN Trigger: ATTCCTTCTGAGAGGCAACCATGAATGCAGACACCT...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAACAACCAATAAGGATGTaGAGAGCAATTAAACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQAPCSLLSSVAAITQQPIRM*RAIKLS Trigger: CGACAGTTTAATTGCTCTCCACATCCTTATTGGTTG...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCTGTGGCAGCGATTACCCAATCTTATAGACGGCACAAGTCCCAGGGCCGGAAACCCTGTAGTTTaGCTTTTTCTGTACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLWQRLPNLIDGTSPRAGNPVV*LFLYIL Trigger: TAGAATGTACAGAAAAAGTCAAACTACAGGGTTTCC...GGCCCTGGGACTTGTGCCGTCTATAAGATTGGGTAATCGCTGCCACAGAGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTGTACATTCTATAGCCTaGATCTTGAGCTTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGCTFWQTKQQMVPLPGAVHSIA*ILSFMS Trigger: GCTCATGAAGCTCAAGATGCAGGCTATAGAATGTAC...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAAGCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEALCKV*RPPANT Trigger: AGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGC...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGTTCTCAGTGGTATGTaGGGTGTTCAGGGAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGVLSGM*GVQGIE Trigger: TTCAATTCCCTGAACACCGCACATACCACTGAGAAC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGCAGATTCTATGTGGTaGAGAGAATCCTCGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGADSMW*RESSYC Trigger: GCAATACGAGGATTCTCTCCACCACATAGAATCTGC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATGGTTGCCAGTCCCGTaGTTCTCAGTGGTATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGWLPVP*FSVVCA Trigger: CGCACATACCACTGAGAACCACGGGACTGGCAACCA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGTACATTCTATAGCCTaGATCTTGAGCTTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGVHSIA*ILSFMS Trigger: GCTCATGAAGCTCAAGATGCAGGCTATAGAATGTAC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCACTGGGCACTATGGTTaGCAGTCCCGTGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRTIASRLHYLVKNISTGHYG*QSRGSQ Trigger: CTGAGAACCACGGGACTGGCAACCATAGTGCCCAGT...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTACCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLPLCKV*RPPANT Trigger: AGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGG...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTCCTTCTTTTACCAAGTaGTTCTTCAGAACATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: TGCTFWQTKQQMVPLPGAPSFTK*FFRTST Trigger: GGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGG...AGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGCTTCTACTTCTATCATaGTTTTCTCCCGCCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGLLLLS*FSPAEV Trigger: TACTTCGGCGGGAGAAAACCATGATAGAAGTAGAAG...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGCTGAACCATCAAACTaGTCTTCACCTTCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YHHLGQPLQLLEVICPFGAEPSN*SSPSVI Trigger: AATGACAGAAGGTGAAGACCAGTTTGATGGTTCAGC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAGTGCCCCAGTCCATCTaGGGCACAGCAAGTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRVPQSI*GTASCI Trigger: TATGCAACTTGCTGTGCCTCAGATGGACTGGGGCAC...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | GGCTGCACTTTCTGGCAAACAAAACAACAGATGGTTCCGCTGCCTGGTGCTATGACACAAAGAAATTGTTaGTTTAGAAGTGCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCTFWQTKQQMVPLPGAMTQRNC*FRSAAR Trigger: CCTTGCTGCACTTCTAAACCAACAATTTCTTTGTGT...CATAGCACCAGGCAGCGGAACCATCTGTTGTTTTGTTTGCCAGAAAGTGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATTTCCGGGCTGCAGCTaGACCTACATCAAACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRFPGCS*TYIKLV Trigger: GACCAGTTTGATGTAGGTTCAGCTGCAGCCCGGAAA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR TCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCCGGTGTTCAGGGAATTaGAACCATCTTGCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLRCSGN*NHLAAQ Trigger: CTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCG...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCCGGTGTTCAGGGAATTaGAACCATCTTGCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRTIASRLHYLVKNISRCSGN*NHLAAQ Trigger: CTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCG...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAATTGAAACCATCTTGCTaGACAGCATCTTTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKCVNHKHKWRCRYPPLELKPSC*TASFRG Trigger: ACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAA...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTACAAAAGAGTGAGTTGTaGCCCAGTCCATCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLQKSEL*PSPSEA Trigger: TGCCTCAGATGGACTGGGGCACAACTCACTCTTTTG...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGAAGCATCTTTCCGGGGTaGCATTCTCTCATTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGSIFPG*HSLIDP Trigger: AGGATCAATGAGAGAATGCCACCCCGGAAAGATGCT...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATCAGATGTCAGCCGATaGGTTGGGGGAAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRSDVSR*VGGKGT Trigger: TGTTCCTTTTCCCCCAACTCATCGGCTGACATCTGA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCTGTCAGCCGATGAGTTaGGGGAAAAGGAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLCQPMS*GKRNSF Trigger: AAAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACA...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATTCAGATGTCAGCCGATaGGTTGGGGGAAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHSDVSR*VGGKGT Trigger: TGTTCCTTTTCCCCCAACTCATCGGCTGACATCTGA...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAAGGTGAAAGTCCACCATaGACACAAAGAAATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEGESPP*TQRNCW Trigger: CCAACAATTTCTTTGTGTTCATGGTGGACTTTCACC...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATGTGTGTATTTCTGGTaGAAGTCCACCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGCVYFW*KSTMNT Trigger: TGTGTTCATGGTGGACTTTCACCAGAAATACACACA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCGTGGCATTCTCTCATTaGTCCTATCCAAACCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRTIASRLHYLVKNISVAFSH*SYPNPL Trigger: CAAAGGGTTTGGATAGGATCAATGAGAGAATGCCAC...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCACGGTGTTCAGGGAATTaGAACCATCTTGCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSRCSGN*NHLAAQ Trigger: CTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCG...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATTGTTAGCAAAAGAGTaGGTTGTGCCCCAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRLLAKE*VVPQSI Trigger: GATGGACTGGGGCACAACTCACTCTTTTGCTAACAA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR GCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAATTGCCTCTTCAAAACTaGAGATTCTATGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKCVNHKHKWRCRYPPLELPLQN*RFYVVE Trigger: CTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAA...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCGAATTGAAACCATCTTaGTGCACAGCATCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLELKPS*CTASFR Trigger: CCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTC...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAACATCATTACCACTTTaGAAGGTCTGCCGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRTSLPL*KVCRPP Trigger: TGGAGGACGGCAGACCTTGCAAAGTGGTAATGATGT...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATGTCAGCCGATGAGTTaGGGGAAAAGGAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRCQPMS*GKRNSF Trigger: AAAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATCAGAACATCAACCCTaGGTATCCCATCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGSEHQP*VSHPYQ Trigger: TTGATATGGATGGGATACCCAGGGTTGATGTTCTGA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCTCGTGTATTAGCAGGTaGTCCTCCTACTTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLSCISR*SSYFKK Trigger: CTTTTTGAAGTAGGAGGATCACCTGCTAATACACGA...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCGGTGAAAGTCCACCATaGACACAAAGAAATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLGESPP*TQRNCW Trigger: CCAACAATTTCTTTGTGTTCATGGTGGACTTTCACC...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCCCTATCCAAACCCTTTaGCTCTTCAAAACTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLPIQTL*LFKTAD Trigger: ATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGG...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCATTGAAACCATCTTGCTaGACAGCATCTTTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSLKPSC*TASFRG Trigger: ACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAA...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGACCTTCTTTTACCAAGTaGTTCTTCAGAACATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGPSFTK*FFRTST Trigger: GGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGG...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGCAAAGCAAGCTACTATTAGTATTTTGGCTTATTGCTAAAATACCCAGGTGTCTGCATTCATaGTTGCCTCTCAGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRRQSKLLLVFWLIAKIPRCLHS*LPLRRN Trigger: ATTCCTTCTGAGAGGCAACCATGAATGCAGACACCT...GGGTATTTTAGCAATAAGCCAAAATACTAATAGTAGCTTGCTTTGCCTCCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAAGGTGTCTGCATTCATaGTTGCCTCTCAGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRRCLHS*LPLRRN Trigger: ATTCCTTCTGAGAGGCAACCATGAATGCAGACACCT...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CCA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAACAACCAATAAGGATGTaGAGAGCAATTAAACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEQPIRM*RAIKLS Trigger: CGACAGTTTAATTGCTCTCCACATCCTTATTGGTTG...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCAAGCATCTTTCCGGGGTaGCATTCTCTCATTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSSIFPG*HSLIDP Trigger: AGGATCAATGAGAGAATGCCACCCCGGAAAGATGCT...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAGGTGAAAGTCCACCATaGACACAAAGAAATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRGESPP*TQRNCW Trigger: CCAACAATTTCTTTGTGTTCATGGTGGACTTTCACC...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATGTGTGTATTTCTGGTaGAAGTCCACCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRCVYFW*KSTMNT Trigger: TGTGTTCATGGTGGACTTTCACCAGAAATACACACA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR TCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGAGGAAACCCTGTAGTTTaGCTTTTTCTGTACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGGNPVV*LFLYIL Trigger: TAGAATGTACAGAAAAAGTCAAACTACAGGGTTTCC...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATGTGGCATTCTCTCATTaGTCCTATCCAAACCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHVAFSH*SYPNPL Trigger: CAAAGGGTTTGGATAGGATCAATGAGAGAATGCCAC...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCACACATTGGTCCAAATaGAGGTGGCTCTTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRTIASRLHYLVKNISTHWSK*RWLFKS Trigger: AGATTTAAAGAGCCACCTGCATTTGGACCAATGTGT...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAGTACATTCTATAGCCTaGATCTTGAGCTTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRVHSIA*ILSFMS Trigger: GCTCATGAAGCTCAAGATGCAGGCTATAGAATGTAC...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCAGTTCTCAGTGGTATGTaGGGTGTTCAGGGAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSVLSGM*GVQGIE Trigger: TTCAATTCCCTGAACACCGCACATACCACTGAGAAC...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAGCAGAAGGAGTTCCCTaGATGCATTATGTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRAEGVP*MHYVYC Trigger: ACAATACACATAATGCATGCAGGGAACTCCTTCTGC...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTACCTTCTTTTACCAAGTaGTTCTTCAGAACATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLPSFTK*FFRTST Trigger: GGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGG...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGACTTCTACTTCTATCATaGTTTTCTCCCGCCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRLLLLS*FSPAEV Trigger: TACTTCGGCGGGAGAAAACCATGATAGAAGTAGAAG...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTACAACCAATAAGGATGTaGAGAGCAATTAAACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLQPIRM*RAIKLS Trigger: CGACAGTTTAATTGCTCTCCACATCCTTATTGGTTG...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR TCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATGGTGAAAGTCCACCATaGACACAAAGAAATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHGESPP*TQRNCW Trigger: CCAACAATTTCTTTGTGTTCATGGTGGACTTTCACC...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATTGTGTGTATTTCTGGTaGAAGTCCACCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHCVYFW*KSTMNT Trigger: TGTGTTCATGGTGGACTTTCACCAGAAATACACACA...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR TCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTAGGAAACCCTGTAGTTTaGCTTTTTCTGTACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLGNPVV*LFLYIL Trigger: TAGAATGTACAGAAAAAGTCAAACTACAGGGTTTCC...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR GCA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATCAGAAGGAATAATGTaGTTGGGTATAGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMIQSQQQITLVVFKATGSEGIM*LGIESS Trigger: TGAAGATTCTATACCCAAGCACATTATTCCTTCTGA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAACACATTGGTCCAAATaGAGGTGGCTCTTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRTHWSK*RWLFKS Trigger: AGATTTAAAGAGCCACCTGCATTTGGACCAATGTGT...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR CCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCACTTCTACTTCTATCATaGTTTTCTCCCGCCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSLLLLS*FSPAEV Trigger: TACTTCGGCGGGAGAAAACCATGATAGAAGTAGAAG...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTATCAGAAGGAATAATGTaGTTGGGTATAGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLVLSILCPGQVLIRCLSEGIM*LGIESS Trigger: TGAAGATTCTATACCCAAGCACATTATTCCTTCTGA...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR GCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATACACATTGGTCCAAATaGAGGTGGCTCTTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHTHWSK*RWLFKS Trigger: AGATTTAAAGAGCCACCTGCATTTGGACCAATGTGT...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGCAAAGCAAGCTACTATTAGTATTTTGGCTTATTGCTAAAATACCCACACAAAGAAATTGTTaGTTTAGAAGTGCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRRQSKLLLVFWLIAKIPTQRNC*FRSAAR Trigger: CCTTGCTGCACTTCTAAACCAACAATTTCTTTGTGT...GGGTATTTTAGCAATAAGCCAAAATACTAATAGTAGCTTGCTTTGCCTCCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
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| CDS-3UTR CCA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAACACAAAGAAATTGTTaGTTTAGAAGTGCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AANLKSRCYKVASTSKDRTQRNC*FRSAAR Trigger: CCTTGCTGCACTTCTAAACCAACAATTTCTTTGTGT...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS-3UTR TCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCAGGAAACCCTGTAGTTTaGCTTTTTCTGTACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSGNPVV*LFLYIL Trigger: TAGAATGTACAGAAAAAGTCAAACTACAGGGTTTCC...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CCA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCAACACAAAGAAATTGTTaGTTTAGAAGTGCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSTQRNC*FRSAAR Trigger: CCTTGCTGCACTTCTAAACCAACAATTTCTTTGTGT...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR GCA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATTCAGAAGGAATAATGTaGTTGGGTATAGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRTIASRLHYLVKNISRHSEGIM*LGIESS Trigger: TGAAGATTCTATACCCAAGCACATTATTCCTTCTGA...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCTCCTCGTATTGCACTTaGCAAGGTCTGCCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IAPSPLLTALLCGSDYPISSYCT*QGLPSS Trigger: GGAGGACGGCAGACCTTGCAAAGTGCAATACGAGGA...GATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022355.11 |
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| CDS-3UTR CAA 90 bp | AATGGAGGTGTAGATATCCTCCACTGGAAATTGCCCCAAGCCCCTTGCTCACTGCACTGGGCACTATGGTaGCCAGTCCCGTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NGGVDILHWKLPQAPCSLHWALW*PVPWFS Trigger: TGAGAACCACGGGACTGGCAACCATAGTGCCCAGTG...CAGTGAGCAAGGGGCTTGGGGCAATTTCCAGTGGAGGATATCTACACCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS TCA 90 bp | TGCCAGTCCCGTGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATTaGAACCATCTTGCTGCACAGCATCTTTCCGGGGTGGCATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQSRGSQWYVRCSGN*NHLAAQHLSGVAFS Trigger: AGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGGGACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCGAACAGAGAAGACTCTaGCCATCTTGCCAATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IAPSPLLTALLCGSDYPIEQRRL*PSCQLL Trigger: GAGCAATTGGCAAGATGGCAAGAGTCTTCTCTGTTC...GATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCGGAATTGAAACCATCTaGCTGCACAGCATCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IAPSPLLTALLCGSDYPIGIETI*LHSIFP Trigger: CGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCC...GATTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS GCA 90 bp | TCACTGGGCACTATGGTTGCCAGTCCCGTGGTTCTCAGTGGTATGTaGGGTGTTCAGGGAATTGAAACCATCTTGCTGCACAGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGTMVASPVVLSGM*GVQGIETILLHSIF Trigger: AAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGGGACTGGCAACCATAGTGCCCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATCCTATCCAAACCCTTaGCCTCTTCAAAACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLPQAPCSLLSSVAAITQSYPNP*PLQNCR Trigger: TCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGATGTCAGCCGATGAGTaGGGGGAAAAGGAACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YHHLGQPLQLLEVICPFGMSADE*GEKEQL Trigger: AAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACAT...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AAATTGCCCCAAGCCCCTTGCTCACTGCTCTCCTCTGTGGCAGCGATTACCCAATGTCTGCATTCATGGTaGCCTCTCAGAAGGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLPQAPCSLLSSVAAITQCLHSW*PLRRNN Trigger: ATTATTCCTTCTGAGAGGCAACCATGAATGCAGACA...TTGGGTAATCGCTGCCACAGAGGAGAGCAGTGAGCAAGGGGCTTGGGGCAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS GCA 90 bp | TTCTCAGTGGTATGTGCGGTGTTCAGGGAATTGAAACCATCTTGCTaGACAGCATCTTTCCGGGGTGGCATTCTCTCATTGATCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVVCAVFRELKPSC*TASFRGGILSLILS Trigger: GGATAGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS GCA 90 bp | TGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATTGAAACCATCTTaGTGCACAGCATCTTTCCGGGGTGGCATTCTCTCATTGATCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WFSVVCAVFRELKPS*CTASFRGGILSLIL Trigger: TAGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CCA 90 bp | CCTATCCAAACCCTTTGCCTCTTCAAAACTGCAGATTCTATGTGGTaGAGAGAATCCTCGTATTGCACTTTGCAAGGTCTGCCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PIQTLCLFKTADSMW*RESSYCTLQGLPSS Trigger: GGAGGACGGCAGACCTTGCAAAGTGCAATACGAGGATTCTCTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022355.11 |
||
| CDS-3UTR CAA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGGGAATTGAAACCATCTaGCTGCACAGCATCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: YHHLGQPLQLLEVICPFGGIETI*LHSIFP Trigger: CGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCC...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CCA 90 bp | GATCCTATCCAAACCCTTTGCCTCTTCAAAACTGCAGATTCTATGTaGTGGAGAGAATCCTCGTATTGCACTTTGCAAGGTCTGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DPIQTLCLFKTADSM*WRESSYCTLQGLPS Trigger: GGACGGCAGACCTTGCAAAGTGCAATACGAGGATTCTCTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022355.11 |
||
| CDS-3UTR CAA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGTCCTATCCAAACCCTTaGCCTCTTCAAAACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YHHLGQPLQLLEVICPFGSYPNP*PLQNCR Trigger: TCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGA...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTGAAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCCACTGGGCACTATGGTaGCCAGTCCCGTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKRTIASRLHYLVKNISHWALW*PVPWFS Trigger: TGAGAACCACGGGACTGGCAACCATAGTGCCCAGTG...GGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTTCAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CCA 90 bp | GTTCAGGGAATTGAAACCATCTTGCTGCACAGCATCTTTCCGGGGTaGCATTCTCTCATTGATCCTATCCAAACCCTTTGCCTCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VQGIETILLHSIFPG*HSLIDPIQTLCLFK Trigger: TTTGAAGAGGCAAAGGGTTTGGATAGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGAGGCAAAGCAAGCTACTATTAGTATTTTGGCTTATTGCTAAAATACCCCACTGGGCACTATGGTaGCCAGTCCCGTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRRQSKLLLVFWLIAKIPHWALW*PVPWFS Trigger: TGAGAACCACGGGACTGGCAACCATAGTGCCCAGTG...GGGTATTTTAGCAATAAGCCAAAATACTAATAGTAGCTTGCTTTGCCTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159027.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAATGTGTGAACCACAAGCATAAATGGAGGTGTAGATATCCTCCACTGGAAATGTCAGCCGATGAGTaGGGGGAAAAGGAACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKCVNHKHKWRCRYPPLEMSADE*GEKEQL Trigger: AAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACAT...TTCCAGTGGAGGATATCTACACCTCCATTTATGCTTGTGGTTCACACATTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | TATCATCACCTTGGTCAACCCCTCCAGCTCCTTGAAGTGATCTGTCCATTTGGGATGGCAGCACCCTCATaGATAATTCTTAGTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: YHHLGQPLQLLEVICPFGMAAPS*IILSAI Trigger: AATTGCACTAAGAATTATCAATGAGGGTGCTGCCAT...CCCAAATGGACAGATCACTTCAAGGAGCTGGAGGGGTTGACCAAGGTGATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCACTCAACTGTGGCACTTaGCAAGGTCTGCCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSLNCGT*QGLPSS Trigger: GGAGGACGGCAGACCTTGCAAAGTGCCACAGTTGAG...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATCTCAACTGTGGCACTTaGCAAGGTCTGCCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTIASRLHYLVKNISRHLNCGT*QGLPSS Trigger: GGAGGACGGCAGACCTTGCAAAGTGCCACAGTTGAG...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CCA 90 bp | GATCCTATCCAAACCCTTTGCCTCTTCAAAACTGCAGATTCTATGTaGTGGAGAGAATCCTCGTATTGCTTTTTCAGCCTCAATAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DPIQTLCLFKTADSM*WRESSYCFFSLNSL Trigger: GAGGCTATTGAGGCTGAAAAAGCAATACGAGGATTCTCTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTAATGTCAGCCGATGAGTaGGGGGAAAAGGAACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQLVLSILCPGQVLIRCLMSADE*GEKEQL Trigger: AAGCTGTTCCTTTTCCCCCAACTCATCGGCTGACAT...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS CCA 90 bp | ATTCTTAGTGCAATTTCTTCATCCACCCGCCCTTCTTTTACCAAGTaGTTCTTCAGAACATCAACCCTGGGTATCCCATCCATATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILSAISSSTRPSFTK*FFRTSTLGIPSISN Trigger: GTTTGATATGGATGGGATACCCAGGGTTGATGTTCTGAAGAACCACTTGGTAAAAGAAGGGCGGGTGGATGAAGAAATTGCACTAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 ENSMUST00000161989.2 |
||
| CDS-3UTR CAA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCGAACAGAGAAGACTCTaGCCATCTTGCCAATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLEQRRL*PSCQLL Trigger: GAGCAATTGGCAAGATGGCAAGAGTCTTCTCTGTTC...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CAA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTAGAACAGAGAAGACTCTaGCCATCTTGCCAATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQLVLSILCPGQVLIRCLEQRRL*PSCQLL Trigger: GAGCAATTGGCAAGATGGCAAGAGTCTTCTCTGTTC...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATCCTATCCAAACCCTTaGCCTCTTCAAAACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KMIQSQQQITLVVFKATGSYPNP*PLQNCR Trigger: TCTGCAGTTTTGAAGAGGCAAAGGGTTTGGATAGGA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGAAACATCATTACCACTTaGCAAGGTCTGCCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AANLKSRCYKVASTSKDRNIITT*QGLPSS Trigger: GGAGGACGGCAGACCTTGCAAAGTGGTAATGATGTT...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGATACAAAGCCAGCAGCAAATCACCCTGGTGGTTTTTAAAGCAACTGGATCTATAGCCTGCATCTaGAGCTTCATGAGCTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KMIQSQQQITLVVFKATGSIACI*SFMSSN Trigger: ATTAGAGCTCATGAAGCTCAAGATGCAGGCTATAGA...TCCAGTTGCTTTAAAAACCACCAGGGTGATTTGCTGCTGGCTTTGTATCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCTGTCTGCATTCATGGTaGCCTCTCAGAAGGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLCLHSW*PLRRNN Trigger: ATTATTCCTTCTGAGAGGCAACCATGAATGCAGACA...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | CAATGGTTTCTTCAGAGAGATTATGACATTTATCATCACCTTGGTCAACCCCTCTCTATAGCCTGCATCTaGAGCTTCATGAGCTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QWFLQRDYDIYHHLGQPLSIACI*SFMSSN Trigger: ATTAGAGCTCATGAAGCTCAAGATGCAGGCTATAGA...GAGGGGTTGACCAAGGTGATGATAAATGTCATAATCTCTCTGAAGAAACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AGACAACTTGTTCTATCAATATTATGCCCTGGCCAGGTACTAATCAGATGCCTATCTATAGCCTGCATCTaGAGCTTCATGAGCTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RQLVLSILCPGQVLIRCLSIACI*SFMSSN Trigger: ATTAGAGCTCATGAAGCTCAAGATGCAGGCTATAGA...TAGGCATCTGATTAGTACCTGGCCAGGGCATAATATTGATAGAACAAGTTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CAA 90 bp | CCAACTGGGTTTCTCAGATTTTGTCTACAAGTCAAAATACATCTAGTAACCTCAGGAATTGAAACCATCTaGCTGCACAGCATCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PTGFLRFCLQVKIHLVTSGIETI*LHSIFP Trigger: CGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCC...TGAGGTTACTAGATGTATTTTGACTTGTAGACAAAATCTGAGAAACCCAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGACTGAGGCACAGCAAGTaGCATAACATCATTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: AANLKSRCYKVASTSKDRLRHSK*HNIITT Trigger: AGTGGTAATGATGTTATGCAACTTGCTGTGCCTCAG...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAACCTAAAATCAAGGTGCTACAAAGTTGCTTCTACATCAAAAGACAGATGTCTGCATTCATGGTaGCCTCTCAGAAGGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: AANLKSRCYKVASTSKDRCLHSW*PLRRNN Trigger: ATTATTCCTTCTGAGAGGCAACCATGAATGCAGACA...TCTGTCTTTTGATGTAGAAGCAACTTTGTAGCACCTTGATTTTAGGTTTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS CCA 90 bp | CATTCCTGCTTAAAGGTAAAATATTCAGTAAGGTGTCTGCATTCATaGTTGCCTCTCAGAAGGAATAATGTGCTTGGGTATAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSCLKVKYSVRCLHS*LPLRRNNVLGYRIF Trigger: GAAGATTCTATACCCAAGCACATTATTCCTTCTGAGAGGCAACCATGAATGCAGACACCTTACTGAATATTTTACCTTTAAGCAGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 ENSMUST00000161989.2 |
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| CDS-3UTR CAA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATTGTCTGCATTCATGGTaGCCTCTCAGAAGGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: KRTIASRLHYLVKNISRHCLHSW*PLRRNN Trigger: ATTATTCCTTCTGAGAGGCAACCATGAATGCAGACA...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCATTGCTTCTAGGCTGCATTACTTAGTCAAAAACATTTCCAGACATATGGCAGCACCCTCATaGATAATTCTTAGTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KRTIASRLHYLVKNISRHMAAPS*IILSAI Trigger: AATTGCACTAAGAATTATCAATGAGGGTGCTGCCAT...ATGTCTGGAAATGTTTTTGACTAAGTAATGCAGCCTAGAAGCAATGGTTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS GCA 72 bp | GCCTCAATAGCCTCAACTGTGGCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACTCCACTAGGCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASIASTVALCKV*RPPANTPLGNI Trigger: GATGTTGCCTAGTGGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGCCACAGTTGAGGCTATTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS GCA 72 bp | GGTGGAGAGAATCCTCGTATTGCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACTCCACTAGGCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: GGENPRIALCKV*RPPANTPLGNI Trigger: GATGTTGCCTAGTGGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGCAATACGAGGATTCTCTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022355.11 |
||
| CDS CAA 90 bp | TTGCCAGTCCCGTGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATaGAAACCATCTTGCTGCACAGCATCTTTCCGGGGTGGCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPVPWFSVVCAVFRE*KPSCCTASFRGGIL Trigger: GAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGGGACTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS TCA 72 bp | CGTGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATTaGAACCATCTTGCTGCACAGCATCTTTCCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGSQWYVRCSGN*NHLAAQHLSGV Trigger: CACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CAA 72 bp | CCGTGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATaGAAACCATCTTGCTGCACAGCATCTTTCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWFSVVCAVFRE*KPSCCTASFRG Trigger: ACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS CAA 90 bp | CCAGTCCATCTGAGGCACAGCAAGTTGCATAACATCATTACCACTTaGCAAGGTCTGCCGTCCTCCAGCCAACACTCCACTAGGCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: PVHLRHSKLHNIITT*QGLPSSSQHSTRQH Trigger: ATGTTGCCTAGTGGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGGTAATGATGTTATGCAACTTGCTGTGCCTCAGATGGACTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS CAA 90 bp | AGCAAAAGAGTGAGTTGTGCCCCAGTCCATCTGAGGCACAGCAAGTaGCATAACATCATTACCACTTTGCAAGGTCTGCCGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKRVSCAPVHLRHSK*HNIITTLQGLPSSS Trigger: GCTGGAGGACGGCAGACCTTGCAAAGTGGTAATGATGTTATGCAACTTGCTGTGCCTCAGATGGACTGGGGCACAACTCACTCTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS GCA 72 bp | GTGGTATGTGCGGTGTTCAGGGAATTGAAACCATCTTaGTGCACAGCATCTTTCCGGGGTGGCATTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VVCAVFRELKPS*CTASFRGGILS Trigger: TGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS GCA 72 bp | ACTATGGTTGCCAGTCCCGTGGTTCTCAGTGGTATGTaGGGTGTTCAGGGAATTGAAACCATCTTGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TMVASPVVLSGM*GVQGIETILLH Trigger: GTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCACGGGACTGGCAACCATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CAA 72 bp | AGTGGTATGTGCGGTGTTCAGGGAATTGAAACCATCTaGCTGCACAGCATCTTTCCGGGGTGGCATTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGMCGVQGIETI*LHSIFPGWHSL Trigger: GAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CAA 72 bp | CTGAGGCACAGCAAGTTGCATAACATCATTACCACTTaGCAAGGTCTGCCGTCCTCCAGCCAACACTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LRHSKLHNIITT*QGLPSSSQHST Trigger: AGTGGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGGTAATGATGTTATGCAACTTGCTGTGCCTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS CAA 72 bp | GTGAGTTGTGCCCCAGTCCATCTGAGGCACAGCAAGTaGCATAACATCATTACCACTTTGCAAGGTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSCAPVHLRHSK*HNIITTLQGLP Trigger: CGGCAGACCTTGCAAAGTGGTAATGATGTTATGCAACTTGCTGTGCCTCAGATGGACTGGGGCACAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS CAA 90 bp | GTGGTTCTCAGTGGTATGTGCGGTGTTCAGGGAATTGAAACCATCTaGCTGCACAGCATCTTTCCGGGGTGGCATTCTCTCATTGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVLSGMCGVQGIETI*LHSIFPGWHSLIDP Trigger: AGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATACCACTGAGAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS GCA 72 bp | GTATGTGCGGTGTTCAGGGAATTGAAACCATCTTGCTaGACAGCATCTTTCCGGGGTGGCATTCTCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: VCAVFRELKPSC*TASFRGGILSL Trigger: CAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAATTCCCTGAACACCGCACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS GCA 72 bp | GCAAGTTGCATAACATCATTACCACTTTGCAAGGTCTaGCGTCCTCCAGCCAACACTCCACTAGGCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASCITSLPLCKV*RPPANTPLGNI Trigger: GATGTTGCCTAGTGGAGTGTTGGCTGGAGGACGGCAGACCTTGCAAAGTGGTAATGATGTTATGCAACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
||
| CDS CCA 72 bp | ATTGAAACCATCTTGCTGCACAGCATCTTTCCGGGGTaGCATTCTCTCATTGATCCTATCCAAACCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IETILLHSIFPG*HSLIDPIQTLC Trigger: GCAAAGGGTTTGGATAGGATCAATGAGAGAATGCCACCCCGGAAAGATGCTGTGCAGCAAGATGGTTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 |
||
| CDS CAA 72 bp | ATGGTTTTCTCCCGCCGAAGTATGGCAGCACCCTCATaGATAATTCTTAGTGCAATTTCTTCATCCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: MVFSRRSMAAPS*IILSAISSSTR Trigger: GCGGGTGGATGAAGAAATTGCACTAAGAATTATCAATGAGGGTGCTGCCATACTTCGGCGGGAGAAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 ENSMUST00000161989.2 |
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| CDS CCA 72 bp | ACCCTTTGCCTCTTCAAAACTGCAGATTCTATGTGGTaGAGAGAATCCTCGTATTGCACTTTGCAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TLCLFKTADSMW*RESSYCTLQGL Trigger: CAGACCTTGCAAAGTGCAATACGAGGATTCTCTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAAAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022355.11 |
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| CDS CCA 72 bp | ACCCTTTGCCTCTTCAAAACTGCAGATTCTATGTGGTaGAGAGAATCCTCGTATTGCTTTTTCAGCCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: TLCLFKTADSMW*RESSYCFFSLN Trigger: ATTGAGGCTGAAAAAGCAATACGAGGATTCTCTCCACCACATAGAATCTGCAGTTTTGAAGAGGCAAAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159027.8 ENSMUST00000161445.8 |
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| CDS GCA 72 bp | GTCTGCATTCATGGTTGCCTCTCAGAAGGAATAATGTaGTTGGGTATAGAATCTTCAAGACCCATAAATATA | + |
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Preference number: 6 (lower is better) Translates to: VCIHGCLSEGIM*LGIESSRPINI Trigger: TATATTTATGGGTCTTGAAGATTCTATACCCAAGCACATTATTCCTTCTGAGAGGCAACCATGAATGCAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 ENSMUST00000161989.2 |
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| CDS GCA 72 bp | AAGACAGGAACTAAAAAGCAGAAGGAGTTCCCTGCATaGATTATGTGTATTGTTAGCAAAAGAGTGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: KTGTKKQKEFPA*IMCIVSKRVSC Trigger: ACAACTCACTCTTTTGCTAACAATACACATAATGCATGCAGGGAACTCCTTCTGCTTTTTAGTTCCTGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161989.2 |
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| CDS TCA 72 bp | ATAATCACCAAGAAAAAGGTATCGTGTATTAGCAGGTaGTCCTCCTACTTCAAAAAGTTTCATCAGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: IITKKKVSCISR*SSYFKKFHQIK Trigger: TTTGATCTGATGAAACTTTTTGAAGTAGGAGGATCACCTGCTAATACACGATACCTTTTTCTTGGTGATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000022355.11 ENSMUST00000159027.8 ENSMUST00000161445.8 ENSMUST00000161989.2 |
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