Pregenerated sensors for PPP2R5E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021051Ensembl transcript IDs: ENSMUST00000021447.9, ENSMUST00000218012.2, ENSMUST00000220035.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAAACAGTGATGAAGGAGCACTGGGGCCTGGGCACAATGAGGAGTaGACGCTTGATCCAGAGGAGACGGTCACTTCGCTCACACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LNSDEGALGPGHNEE*TLDPEETVTSLTQL Trigger: CAGCTGTGTGAGCGAAGTGACCGTCTCCTCTGGATCAAGCGTCCACTCCTCATTGTGCCCAGGCCCCAGTGCTCCTTCATCACTGTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 90 bp | CTGACCCTTAGCTCTGAGGACAGGACACGGTGCAGAAAGAGGTCCTaGCCTTCCTCATGTCAAATGAGCACATGTCATCCCCAGAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LTLSSEDRTRCRKRS*PSSCQMSTCHPQRD Trigger: GTCCCTCTGGGGATGACATGTGCTCATTTGACATGAGGAAGGTCAGGACCTCTTTCTGCACCGTGTCCTGTCCTCAGAGCTAAGGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 90 bp | ACAGGACACGGTGCAGAAAGAGGTCCTGACCTTCCTCATGTCAAATaGGCACATGTCATCCCCAGAGGGACCACAGCAAGCAAGGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TGHGAERGPDLPHVK*AHVIPRGTTASKVY Trigger: GTAGACCTTGCTTGCTGTGGTCCCTCTGGGGATGACATGTGCTCATTTGACATGAGGAAGGTCAGGACCTCTTTCTGCACCGTGTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 90 bp | CCCACAACACACACTTGCCAATACACAGCGATGCAACACATCGGGTaGATACATACTGCACACCTGTACATCAGCAACTTACCTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: PTTHTCQYTAMQHIG*IHTAHLYISNLPTQ Trigger: CTGGGTAGGTAAGTTGCTGATGTACAGGTGTGCAGTATGTATTCACCCGATGTGTTGCATCGCTGTGTATTGGCAAGTGTGTGTTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR GCA 90 bp | CCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATaGACACTTATGTCTGCAGCTAATGCTGCAGGTGCTGAAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PKGCSLTFLSCLWSG*TLMSAANAAGAEAC Trigger: GCAGGCTTCAGCACCTGCAGCATTAGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR GCA 90 bp | TCCTGGAAACAAACCCCACAACACACACTTGCCAATACACAGCGATaGAACACATCGGGTGAATACATACTGCACACCTGTACATCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SWKQTPQHTLANTQR*NTSGEYILHTCTSA Trigger: TGCTGATGTACAGGTGTGCAGTATGTATTCACCCGATGTGTTGCATCGCTGTGTATTGGCAAGTGTGTGTTGTGGGGTTTGTTTCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR CCA 90 bp | CCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTaGTCTGGATGCACACTTATGTCTGCAGCTAATGCTGCAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PQDPKGCSLTFLSCL*SGCTLMSAANAAGA Trigger: AGCACCTGCAGCATTAGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR CAA 90 bp | GTGATGAAGGAGCACTGGGGCCTGGGCACAATGAGGAGTGGACGCTaGATCCAGAGGAGACGGTCACTTCGCTCACACAGCTGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VMKEHWGLGTMRSGR*IQRRRSLRSHSCCR Trigger: CCTGCAGCAGCTGTGTGAGCGAAGTGACCGTCTCCTCTGGATCAAGCGTCCACTCCTCATTGTGCCCAGGCCCCAGTGCTCCTTCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCCCAGGACCTGGCAGCTaGGAAGATGTTCATCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TSATYLPRGTQYRDSKPSPGPGS*EDVHPA Trigger: TGCTGGATGAACATCTTCCCAGCTGCCAGGTCCTGG...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCAGGAGTACCAGGACCTaGCAGCTGGGAAGATGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TSATYLPRGTQYRDSKPSRSTRT*QLGRCS Trigger: TGAACATCTTCCCAGCTGCCAGGTCCTGGTACTCCT...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCTGTCTCTGGTCTGGATaGACACTTATGTCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: TSATYLPRGTQYRDSKPSCLWSG*TLMSAA Trigger: AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACA...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGATGTTTGCAAAGTTCTaGGAGTCCATCTACTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: WCSASRFYRLVLSLLLHRMFAKF*ESIYCP Trigger: TGGACAGTAGATGGACTCTCAGAACTTTGCAAACAT...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTCCAGGACCTGGCAGCTaGGAAGATGTTCATCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GCSLTFLSCLWSGCTLMSPGPGS*EDVHPA Trigger: TGCTGGATGAACATCTTCCCAGCTGCCAGGTCCTGG...AGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTAGGAGTACCAGGACCTaGCAGCTGGGAAGATGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLTFLSCLWSGCTLMSAARSTRT*QLGRCS Trigger: TGAACATCTTCCCAGCTGCCAGGTCCTGGTACTCCT...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACGATGGCTCGGGGTTATaGGCTCACCACTGTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYDGSGL*AHHCPV Trigger: GACAGGACAGTGGTGAGCCCATAACCCCGAGCCATC...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACAATACAGAAAACTGTTaGTCCATCCTTCTACTACAT | + |
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Preference number: 2 (lower is better) Translates to: NLSSETSDSQPRSMWTLDNTENC*SILLLH Trigger: ATGTAGTAGAAGGATGGAGCAACAGTTTTCTGTATT...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR CAA 90 bp | TCTAACAAGAAAAAGCTTCCTGGAAACAAACCCCACAACACACACTaGCCAATACACAGCGATGCAACACATCGGGTGAATACATACTGC | + |
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Preference number: 2 (lower is better) Translates to: SNKKKLPGNKPHNTH*PIHSDATHRVNTYC Trigger: GCAGTATGTATTCACCCGATGTGTTGCATCGCTGTGTATTGGCAAGTGTGTGTTGTGGGGTTTGTTTCCAGGAAGCTTTTTCTTGTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGATGTTTGCAAAGTTCTaGGAGTCCATCTACTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SYSTGSERMFSDISKLSLMFAKF*ESIYCP Trigger: TGGACAGTAGATGGACTCTCAGAACTTTGCAAACAT...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGTGGACACTTGACTCATaGAGATGTGCAAAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SYSTGSERMFSDISKLSLWTLDS*RCAKGK Trigger: CTTTCCTTTTGCACATCTTCATGAGTCAAGTGTCCA...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTTCACCATATCTGATATaGAGTCCAACATTCCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: GCSLTFLSCLWSGCTLMSSPYLI*SPTFPS Trigger: CGAAGGGAATGTTGGACTTCATATCAGATATGGTGA...AGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTTTCCCTTCGCTACCATaGTTATCACCTCTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAFPSLP*LSPLLF Trigger: AAAAAGAAGAGGTGATAAGCATGGTAGCGAAGGGAA...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACTGGACACTTGACTCATaGAGATGTGCAAAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYWTLDS*RCAKGK Trigger: CTTTCCTTTTGCACATCTTCATGAGTCAAGTGTCCA...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTAATACAGAAAACTGTTaGTCCATCCTTCTACTACAT | + |
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Preference number: 2 (lower is better) Translates to: SLTFLSCLWSGCTLMSAANTENC*SILLLH Trigger: ATGTAGTAGAAGGATGGAGCAACAGTTTTCTGTATT...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR CCA 72 bp | GATGAAGGAGCACTGGGGCCTGGGCACAATGAGGAGTaGACGCTTGATCCAGAGGAGACGGTCACTTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: DEGALGPGHNEE*TLDPEETVTSL Trigger: GAGCGAAGTGACCGTCTCCTCTGGATCAAGCGTCCACTCCTCATTGTGCCCAGGCCCCAGTGCTCCTTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 72 bp | ACAGAGTCGGCTCTATGCCATGAACACTGCTGGATGTaGTGGCTCGGGGTTATGGGCTCACCACTGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: TESALCHEHCWM*WLGVMGSPLSC Trigger: ACAGGACAGTGGTGAGCCCATAACCCCGAGCCATCACATCCAGCAGTGTTCATGGCATAGAGCCGACTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR GCA 72 bp | GGAGACGGTCACTTCGCTCACACAGCTGCTGCAGGCTaGAACCTGCAACCTCGGCATCATTCTAAATCACAG | + |
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Preference number: 3 (lower is better) Translates to: GDGHFAHTAAAG*NLQPRHHSKSQ Trigger: CTGTGATTTAGAATGATGCCGAGGTTGCAGGTTGCAGCCTGCAGCAGCTGTGTGAGCGAAGTGACCGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 72 bp | GGTGCAGAAAGAGGTCCTGACCTTCCTCATGTCAAATaGGCACATGTCATCCCCAGAGGGACCACAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: GAERGPDLPHVK*AHVIPRGTTAS Trigger: GCTTGCTGTGGTCCCTCTGGGGATGACATGTGCTCATTTGACATGAGGAAGGTCAGGACCTCTTTCTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 72 bp | AGCTCTGAGGACAGGACACGGTGCAGAAAGAGGTCCTaGCCTTCCTCATGTCAAATGAGCACATGTCATCCC | + |
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Preference number: 3 (lower is better) Translates to: SSEDRTRCRKRS*PSSCQMSTCHP Trigger: GGGATGACATGTGCTCATTTGACATGAGGAAGGTCAGGACCTCTTTCTGCACCGTGTCCTGTCCTCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 72 bp | ACAGAGCTGAGTTTGTCACAGTTAACTCACATTGAGTaGCAGCAGGATTGCCCAGGGAGGTCAGACAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: TELSLSQLTHIE*QQDCPGRSDRG Trigger: CCCCCTGTCTGACCTCCCTGGGCAATCCTGCTGTCACTCAATGTGAGTTAACTGTGACAAACTCAGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR TCA 72 bp | CATTCCTCTCAGTTGGGAATGACCAACAGACAACACTaGCCCTTAGCTCTGAGGACAGGACACGGTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: HSSQLGMTNRQH*PLALRTGHGAE Trigger: TTCTGCACCGTGTCCTGTCCTCAGAGCTAAGGGTCAGTGTTGTCTGTTGGTCATTCCCAACTGAGAGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR GCA 72 bp | GTCACTTCGCTCACACAGCTGCTGCAGGCTGCAACCTaGAACCTCGGCATCATTCTAAATCACAGGGTTATA | + |
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Preference number: 3 (lower is better) Translates to: VTSLTQLLQAAT*NLGIILNHRVI Trigger: TATAACCCTGTGATTTAGAATGATGCCGAGGTTGCAGGTTGCAGCCTGCAGCAGCTGTGTGAGCGAAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR CCA 72 bp | GCCATGAACACTGCTGGATGTGATGGCTCGGGGTTATaGGCTCACCACTGTCCTGTCTCTAACAAGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: AMNTAGCDGSGL*AHHCPVSNKKK Trigger: CTTTTTCTTGTTAGAGACAGGACAGTGGTGAGCCCATAACCCCGAGCCATCACATCCAGCAGTGTTCATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR GCA 72 bp | TGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATaGACACTTATGTCTGCAGCTAATGCTGCAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: CSLTFLSCLWSG*TLMSAANAAGA Trigger: AGCACCTGCAGCATTAGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR CCA 72 bp | CCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTaGTCTGGATGCACACTTATGTCTGCAGCTAATGCT | + |
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Preference number: 3 (lower is better) Translates to: PKGCSLTFLSCL*SGCTLMSAANA Trigger: AGCATTAGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACAGCACAGCCCTCGGGTaGGTTTGGTTTTGTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYSTALG*VWFCFV Trigger: AACAAAACAAAACCAAACCAACCCGAGGGCTGTGCT...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGAAAAAGCTTCCTGGAAACAAACCCCACAACACACACTTGCCAATACACAGTCTACTGTCCACACTTaGAAGTCCTTATGTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: QEKASWKQTPQHTLANTQSTVHT*KSLCFP Trigger: AGGAAAACATAAGGACTTCAAAGTGTGGACAGTAGA...CTGTGTATTGGCAAGTGTGTGTTGTGGGGTTTGTTTCCAGGAAGCTTTTTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTTCTACTGTCCACACTTaGAAGTCCTTATGTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLTFLSCLWSGCTLMSAASTVHT*KSLCFP Trigger: AGGAAAACATAAGGACTTCAAAGTGTGGACAGTAGA...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGCAATACAGAAAACTGTaGCTCCATCCTTCTACTACA | + |
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Preference number: 3 (lower is better) Translates to: SYSTGSERMFSDISKLSLQYRKL*LHPSTT Trigger: TGTAGTAGAAGGATGGAGCAACAGTTTTCTGTATTG...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACCAATACAGAAAACTGTaGCTCCATCCTTCTACTACA | + |
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Preference number: 3 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYQYRKL*LHPSTT Trigger: TGTAGTAGAAGGATGGAGCAACAGTTTTCTGTATTG...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| 3UTR CAA 72 bp | GAGCACTGGGGCCTGGGCACAATGAGGAGTGGACGCTaGATCCAGAGGAGACGGTCACTTCGCTCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: EHWGLGTMRSGR*IQRRRSLRSHS Trigger: GCTGTGTGAGCGAAGTGACCGTCTCCTCTGGATCAAGCGTCCACTCCTCATTGTGCCCAGGCCCCAGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| CDS-3UTR TCA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCGCAGTGGCAGAGGCGTaGGCTCAATGGGCTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSATYLPRGTQYRDSKPSAVAEA*AQWACL Trigger: AAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGC...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACGCAGTGGCAGAGGCGTaGGCTCAATGGGCTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDAVAEA*AQWACL Trigger: AAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGC...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCAGTACAGAGACAGTAAGCCCAGCTAGAGCACAGCCCTCGGGTTGGGTCTACTTTATCCACTaGTGGAGGAGTAGTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GGPSTETVSPARAQPSGWVYFIH*WRSSWC Trigger: GCACCAACTACTCCTCCATCAGTGGATAAAGTAGAC...CCAACCCGAGGGCTGTGCTCTAGCTGGGCTTACTGTCTCTGTACTGGGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCAGTACAGAGACAGTAAGCCCAGCTAGAGCACAGCCCTCGGGTTGGTCTGTCTGGCTTTTCTaGCGGACTTCCGAGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: GGPSTETVSPARAQPSGWSVWLF*RTSEKI Trigger: GATTTTCTCGGAAGTCCGTCAGAAAAGCCAGACAGA...CCAACCCGAGGGCTGTGCTCTAGCTGGGCTTACTGTCTCTGTACTGGGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| CDS-3UTR TCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGGCTTGCCTTGAGACCTaGACTGGGAGGAGCTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: WCSASRFYRLVLSLLLHRACLET*TGRSFA Trigger: CGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGC...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACTCAATGGGCTTGCCTTaGGACCTGAACTGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDSMGLP*DLNWEE Trigger: CTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGA...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| CDS-3UTR TCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGTCAATGGGCTTGCCTTaGGACCTGAACTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WCSASRFYRLVLSLLLHRSMGLP*DLNWEE Trigger: CTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGA...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACTACGCCAGCTGTGCATaGAAGAGTGACAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDYASCA*KSDKLL Trigger: CAGGAGCTTGTCACTCTTTCATGCACAGCTGGCGTA...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGCAGTTCAGGCTGCTCTaGGGTTGGAACGTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCSASRFYRLVLSLLLHRQFRLL*GWNVFQ Trigger: CTGAAAGACGTTCCAACCTCAGAGCAGCCTGAACTG...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR GCA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCAGGAACAGTTCAGGCTaGTCTGAGGTTGGAACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSATYLPRGTQYRDSKPSRNSSG*SEVGTS Trigger: AGACGTTCCAACCTCAGAGCAGCCTGAACTGTTCCT...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR GCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACATAGAGTGCCCTTTCTaGCACCTGAAAATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDIECPF*HLKMGA Trigger: AGCCCCCATTTTCAGGTGGCAGAAAGGGCACTCTAT...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACGTCTACTTTATCCACTaGTGGAGGAGTAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDVYFIH*WRSSWC Trigger: GCACCAACTACTCCTCCATCAGTGGATAAAGTAGAC...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACTCTGTCTGGCTTTTCTaGCGGACTTCCGAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDSVWLF*RTSEKI Trigger: GATTTTCTCGGAAGTCCGTCAGAAAAGCCAGACAGA...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGTATACAAGCTGTAAGTaGGGCCATGATGCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WCSASRFYRLVLSLLLHRYTSCK*GHDASR Trigger: CCTCGAGGCATCATGGCCCCACTTACAGCTTGTATA...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACCCAGTACAGAGACAGTAAGCCCAGCTAGAGCACAGCCCTCGGGTTGGCTGGGTTGGAATTCTTaGCTTTCCAAAAATCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: GGPSTETVSPARAQPSGWLGWNS*LSKNLM Trigger: CATAAGATTTTTGGAAAGCCAAGAATTCCAACCCAG...CCAACCCGAGGGCTGTGCTCTAGCTGGGCTTACTGTCTCTGTACTGGGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| 3UTR CAA 72 bp | GGAAGTAAGGCATCAACTGCAAACAGTTCATGCTGTTaGCTCAACTCGGTTCCCAAGTGGATGCGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKASTANSSCC*LNSVPKWMRGP Trigger: AGGACCGCGCATCCACTTGGGAACCGAGTTGAGCAAACAGCATGAACTGTTTGCAGTTGATGCCTTACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACTTCTTTTTCTCACGCTaGCGATCTGACTTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDFFFSR*RSDLYV Trigger: CACATACAAGTCAGATCGTCAGCGTGAGAAAAAGAA...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGTTCTTTTTCTCACGCTaGCGATCTGACTTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WCSASRFYRLVLSLLLHRFFFSR*RSDLYV Trigger: CACATACAAGTCAGATCGTCAGCGTGAGAAAAAGAA...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAAAAAGCTTCCTGGAAACAAACCCCACAACACACACTTGCCAATACACAGGCTCCCCGAGGAACATaGCCTCTTTTTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QEKASWKQTPQHTLANTQAPRGT*PLFDCM Trigger: CATGCAGTCAAAAAGAGGTCATGTTCCTCGGGGAGC...CTGTGTATTGGCAAGTGTGTGTTGTGGGGTTTGTTTCCAGGAAGCTTTTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTGCTCCCCGAGGAACATaGCCTCTTTTTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAAPRGT*PLFDCM Trigger: CATGCAGTCAAAAAGAGGTCATGTTCCTCGGGGAGC...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACCTGGGTTGGAATTCTTaGCTTTCCAAAAATCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSETSDSQPRSMWTLDLGWNS*LSKNLM Trigger: CATAAGATTTTTGGAAAGCCAAGAATTCCAACCCAG...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTTACGCCAGCTGTGCATaGAAGAGTGACAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSLTFLSCLWSGCTLMSYASCA*KSDKLL Trigger: CAGGAGCTTGTCACTCTTTCATGCACAGCTGGCGTA...AGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTAGGAACAGTTCAGGCTaGTCTGAGGTTGGAACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTFLSCLWSGCTLMSAARNSSG*SEVGTS Trigger: AGACGTTCCAACCTCAGAGCAGCCTGAACTGTTCCT...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTCACGTTGTACACCAATaGCACAATGGCCGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAHVVHQ*HNGRIP Trigger: TGGAATCCGGCCATTGTGGCATTGGTGTACAACGTG...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACCAGTTCAGGCTGCTCTaGGGTTGGAACGTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYQFRLL*GWNVFQ Trigger: CTGAAAGACGTTCCAACCTCAGAGCAGCCTGAACTG...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR TCA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGAGAGTGACAAGCTCCTaGCAGTGTGTAGAGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSTGSERMFSDISKLSLRVTSS*QCVEGS Trigger: TGATCCCTCTACACACTGTCAGGAGCTTGTCACTCT...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR GCA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGATAGAGTGCCCTTTCTaGCACCTGAAAATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYSTGSERMFSDISKLSLIECPF*HLKMGA Trigger: AGCCCCCATTTTCAGGTGGCAGAAAGGGCACTCTAT...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| 3UTR CAA 72 bp | ACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTaGTCTCTGGTCTGGATGCACACTTATGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSERMFSDISK*SLVWMHTYVCS Trigger: GCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| 3UTR CAA 72 bp | AAAAAGCTTCCTGGAAACAAACCCCACAACACACACTaGCCAATACACAGCGATGCAACACATCGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKLPGNKPHNTH*PIHSDATHRVN Trigger: ATTCACCCGATGTGTTGCATCGCTGTGTATTGGCAAGTGTGTGTTGTGGGGTTTGTTTCCAGGAAGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACAGAGTGACAAGCTCCTaGCAGTGTGTAGAGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYRVTSS*QCVEGS Trigger: TGATCCCTCTACACACTGTCAGGAGCTTGTCACTCT...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTTCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTACACCAATGCCACAATaGCCGGATTCCAATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCSLTFLSCLWSGCTLMSTPMPQ*PDSNAL Trigger: AAGAGCATTGGAATCCGGCCATTGTGGCATTGGTGT...AGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGAACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAMTQHC*SFFRNS Trigger: ACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCAT...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTAGGTTCATCTTCTTCTaGGTCGAATTCATTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTFLSCLWSGCTLMSAARFIFF*VEFIAV Trigger: GACAGCAATGAATTCGACCCAGAAGAAGATGAACCT...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR TCA 90 bp | TCTTACTCCACAGGATCCGAAAGGATGTTCTCTGACATTTCTAAGTTGTCTCTGATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYSTGSERMFSDISKLSLMTQHC*SFFRNS Trigger: ACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCAT...CAGAGACAACTTAGAAATGTCAGAGAACATCCTTTCGGATCCTGTGGAGTAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS TCA 90 bp | ACGTCTTTCAGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTTaGGACCTGAACTGGGAGGAGCTTTGCGACCTCTTCTGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSFSSGRGVSSMGLP*DLNWEELCDLFCLA Trigger: AGCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCTGAAAGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS TCA 90 bp | ATACCTTTCAGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTTaGGACCTGAACTGGGAGGAGCTTTGCGACCTCTTCTGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPFSSGRGVSSMGLP*DLNWEELCDLFCLA Trigger: AGCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCTGAAAGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218012.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGGAACTGGGAGGAGCTTaGCGACCTCTTCTGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WCSASRFYRLVLSLLLHRELGGA*RPLLSG Trigger: GCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTC...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | ACATCAGCAACTTACCTACCCAGGGGGACCCAGTACAGAGACAGTAAGCCCAGCCAGGCTGCTCTGAGGTaGGAACGTCTTTCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSATYLPRGTQYRDSKPSQAALR*ERLSAV Trigger: CACTGCTGAAAGACGTTCCAACCTCAGAGCAGCCTG...GCTGGGCTTACTGTCTCTGTACTGGGTCCCCCTGGGTAGGTAAGTTGCTGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS-3UTR CAA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACCAGGCTGCTCTGAGGTaGGAACGTCTTTCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLSSETSDSQPRSMWTLDQAALR*ERLSAV Trigger: CACTGCTGAAAGACGTTCCAACCTCAGAGCAGCCTG...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACTTCACCAGGAACTGTTaGTGTTCTGCCTTGAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLSSETSDSQPRSMWTLDFTRNC*CSALSG Trigger: ACCACTCAAGGCAGAACACAAACAGTTCCTGGTGAA...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTGAACTGGGAGGAGCTTaGCGACCTCTTCTGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAELGGA*RPLLSG Trigger: GCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTC...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTTCCTCAGAGACCTCTGACTCACAGCCCCGGTCCATGTGGACACTTGACGCTGGGTTGGAATTCTaGGCTTTCCAAAAATCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NLSSETSDSQPRSMWTLDAGLEF*AFQKSY Trigger: ATAAGATTTTTGGAAAGCCAAGAATTCCAACCCAGC...GTCAAGTGTCCACATGGACCGGGGCTGTGAGTCAGAGGTCTCTGAGGAAAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTCGGCTTCACGGTTCTATCGCTTAGTGCTCTCTCTCTTACTCCACAGGGCTGGGTTGGAATTCTaGGCTTTCCAAAAATCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WCSASRFYRLVLSLLLHRAGLEF*AFQKSY Trigger: ATAAGATTTTTGGAAAGCCAAGAATTCCAACCCAGC...CCTGTGGAGTAAGAGAGAGAGCACTAAGCGATAGAACCGTGAAGCCGAGCACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS TCA 90 bp | AGATCAGATAGCGTGTCCATGAAGTCAAAAATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGTTCAGGCTGCTCTGAGGTTGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: RSDSVSMKSKMTQHC*SFFRNSSGCSEVGT Trigger: CGTTCCAACCTCAGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCATTTTTGACTTCATGGACACGCTATCTGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGACATTTCTAAGTTGTCTCTGGTCTGGATGCACACTTATGTCTGCAGCTTTCACCAGGAACTGTTaGTGTTCTGCCTTGAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLTFLSCLWSGCTLMSAAFTRNC*CSALSG Trigger: ACCACTCAAGGCAGAACACAAACAGTTCCTGGTGAA...AGCTGCAGACATAAGTGTGCATCCAGACCAGAGACAACTTAGAAATGTCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAGAGTCCTATTTATTCCACTGAACCATCTTGGACTTGGTGGTACGCATACTCTGGGTCGAATTCATaGCTGTCACTAGGAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FKSPIYSTEPSWTWWYAYSGSNS*LSLGGR Trigger: TCTCCCTCCTAGTGACAGCAATGAATTCGACCCAGA...GTATGCGTACCACCAAGTCCAAGATGGTTCAGTGGAATAAATAGGACTCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
||
| CDS TCA 72 bp | AGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTTaGGACCTGAACTGGGAGGAGCTTTGCGACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGRGVSSMGLP*DLNWEELCDLF Trigger: GAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021447.9 ENSMUST00000218012.2 ENSMUST00000220035.2 |
||
| CDS CAA 72 bp | CAGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTaGAGACCTGAACTGGGAGGAGCTTTGCGACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QQWQRRELNGLA*RPELGGALRPL Trigger: AAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021447.9 ENSMUST00000218012.2 ENSMUST00000220035.2 |
||
| CDS CAA 90 bp | AACGTCTTTCAGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTaGAGACCTGAACTGGGAGGAGCTTTGCGACCTCTTCTGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NVFQQWQRRELNGLA*RPELGGALRPLLSG Trigger: GCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCTGAAAGACGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
||
| CDS CAA 90 bp | GATACCTTTCAGCAGTGGCAGAGGCGTGAGCTCAATGGGCTTGCCTaGAGACCTGAACTGGGAGGAGCTTTGCGACCTCTTCTGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DTFQQWQRRELNGLA*RPELGGALRPLLSG Trigger: GCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACGCCTCTGCCACTGCTGAAAGGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218012.2 |
||
| CDS CAA 90 bp | CGTGAGCTCAATGGGCTTGCCTTGAGACCTGAACTGGGAGGAGCTTaGCGACCTCTTCTGTCTGGCTTTTCTGACGGACTTCCGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: RELNGLALRPELGGA*RPLLSGFSDGLPRK Trigger: TTTTCTCGGAAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATTGAGCTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021447.9 ENSMUST00000218012.2 ENSMUST00000220035.2 |
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| CDS CAA 72 bp | AATGGGCTTGCCTTGAGACCTGAACTGGGAGGAGCTTaGCGACCTCTTCTGTCTGGCTTTTCTGACGGACTT | + |
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Preference number: 6 (lower is better) Translates to: NGLALRPELGGA*RPLLSGFSDGL Trigger: AAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGCTCCTCCCAGTTCAGGTCTCAAGGCAAGCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021447.9 ENSMUST00000218012.2 ENSMUST00000220035.2 |
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| CDS TCA 72 bp | GGGAGGAGCTTTGCGACCTCTTCTGTCTGGCTTTTCTaGCGGACTTCCGAGAAAATCCGTCTACTTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: GRSFATSSVWLF*RTSEKIRLLYP Trigger: TGGATAAAGTAGACGGATTTTCTCGGAAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGCTCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021447.9 ENSMUST00000218012.2 ENSMUST00000220035.2 |
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| CDS CAA 90 bp | CATGATGCCTCGAGGGTAGGTTCATCTTCTTCTGGGTCGAATTCATaGCTGTCACTAGGAGGGAGAGTTCTGAATATATTGCAAGATACC | + |
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Preference number: 6 (lower is better) Translates to: HDASRVGSSSSGSNS*LSLGGRVLNILQDT Trigger: GGTATCTTGCAATATATTCAGAACTCTCCCTCCTAGTGACAGCAATGAATTCGACCCAGAAGAAGATGAACCTACCCTCGAGGCATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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| CDS TCA 72 bp | AGCGTGTCCATGAAGTCAAAAATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGTTCAGGCTGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVSMKSKMTQHC*SFFRNSSGCSE Trigger: CTCAGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCATTTTTGACTTCATGGACACGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021447.9 ENSMUST00000220035.2 |
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| CDS CAA 72 bp | TCGAGGGTAGGTTCATCTTCTTCTGGGTCGAATTCATaGCTGTCACTAGGAGGGAGAGTTCTGAATATATTG | + |
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Preference number: 6 (lower is better) Translates to: SRVGSSSSGSNS*LSLGGRVLNIL Trigger: CAATATATTCAGAACTCTCCCTCCTAGTGACAGCAATGAATTCGACCCAGAAGAAGATGAACCTACCCTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021447.9 |
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