Pregenerated sensors for PPP2R5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017843Ensembl transcript IDs: ENSMUST00000084985.11, ENSMUST00000109832.3, ENSMUST00000220509.2, ENSMUST00000221074.2, ENSMUST00000221715.2, ENSMUST00000222276.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCAGACGCTAGCGCCCGTCCTGGGAGAGCAGCTCACTGGCTCTaGAGTGAGCTTCCAAGGCTTTCTCGGTGTGGGGGTCCTGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: APDASARPGRAAHWL*SELPRLSRCGGPEA Trigger: TGCCTCAGGACCCCCACACCGAGAAAGCCTTGGAAGCTCACTGCAGAGCCAGTGAGCTGCTCTCCCAGGACGGGCGCTAGCGTCTGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| 3UTR TCA 90 bp | CACCCAAGTGGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTTTTaGCTAGCCGTGCTGGCTCTCCCTCCCTGCACATGCCCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: HPSGQPVHPQLGPPF*LAVLALPPCTCPSS Trigger: GGAAGAAGGGCATGTGCAGGGAGGGAGAGCCAGCACGGCTAGTCAAAAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCCACTTGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR GCA 90 bp | GCTTTTTCCAACAGAAAGAAAGGCTCACTGAGGGCGCCCACACAGTaGGGCCCGCAGTCAGGCCACAGGCAGCTGCAGGCTGCACTAGGC | + |
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Preference number: 1 (lower is better) Translates to: AFSNRKKGSLRAPTQ*GPQSGHRQLQAALG Trigger: GCCTAGTGCAGCCTGCAGCTGCCTGTGGCCTGACTGCGGGCCGCACTGTGTGGGCGCCCTCAGTGAGCCTTTCTTTCTGTTGGAAAAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR GCA 90 bp | CTTCCAAGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTaGGGCGCACGAGGGGACGATCCTTCTTCAGCTCCTTCTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LPRLSRCGGPEAART*GARGDDPSSAPSVP Trigger: AGGCACAGAAGGAGCTGAAGAAGGATCGTCCCCTCGTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCTTGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| 3UTR GCA 90 bp | CTCCCCCGCGCTGAGCTTTGCACAATCACCCGTACACTGATAGCATaGTCTTCACGCAGGGCAAAGGAGCCTCTTGGGACCTCTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: LPRAELCTITRTLIA*SSRRAKEPLGTSHH Trigger: GTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCCTGCGTGAAGAGCATGCTATCAGTGTACGGGTGATTGTGCAAAGCTCAGCGCGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR CCA 90 bp | CTGAGAGACCTAACCAACCACCACGGGCGGCTGGCACAGCAAGCGTaGGGACAGCGTCAGGGTTGTAAAGGGAGGAGACACCTTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: LRDLTNHHGRLAQQA*GQRQGCKGRRHLLP Trigger: TGGTAAAAGGTGTCTCCTCCCTTTACAACCCTGACGCTGTCCCCACGCTTGCTGTGCCAGCCGCCCGTGGTGGTTGGTTAGGTCTCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | CCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTaGACTCCTAATCTCGAGCTGAGGCGGACGTGCATTATTGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: PAPCLASRAREATIV*TPNLELRRTCIIAY Trigger: GTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR GCA 90 bp | ACGCAGGGCAAAGGAGCCTCTTGGGACCTCTCACCACACTCGGAATaGCCCACACGTCAGGGATATCTGAGACTCTACCAGCTAAAGACG | + |
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Preference number: 1 (lower is better) Translates to: TQGKGASWDLSPHSE*PTRQGYLRLYQLKT Trigger: CGTCTTTAGCTGGTAGAGTCTCAGATATCCCTGACGTGTGGGGCATTCCGAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCCTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR GCA 90 bp | AGGGTGCTTTCCTACAGCTCTGACTTTGGATCTCACTCAGGGCTGTaGTGGGGTGGTGACAACATGGTGATGACACTGTCACCGACTCCC | + |
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Preference number: 1 (lower is better) Translates to: RVLSYSSDFGSHSGL*WGGDNMVMTLSPTP Trigger: GGGAGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR CCA 90 bp | GTGCTTTCCTACAGCTCTGACTTTGGATCTCACTCAGGGCTGTGCTaGGGTGGTGACAACATGGTGATGACACTGTCACCGACTCCCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLSYSSDFGSHSGLC*GGDNMVMTLSPTPP Trigger: TGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTAGGAAAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR TCA 90 bp | GCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTAATCTCGAGCTaGGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: AGPEKPPLFELLISS*GGRALLPTERGQRK Trigger: CTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR GCA 90 bp | TTCTCCTCAAGGTGGGCTGAGGAAGCACTTCTCAGAACCCTCCCTTaGGCTGAGGTGGAACCCTGGCCTCTACCACAGACTATGAAATAT | + |
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Preference number: 1 (lower is better) Translates to: FSSRWAEEALLRTLP*AEVEPWPLPQTMKY Trigger: ATATTTCATAGTCTGTGGTAGAGGCCAGGGTTCCACCTCAGCGCAAGGGAGGGTTCTGAGAAGTGCTTCCTCAGCCCACCTTGAGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | CTTGCTAAGTGGGTGGGAAAAGCAGGGAAGAACAGAGCCCAAGGCTaGGGGGAGACAACAGCCATCAGAAAGAGTAACTCAGAGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: LAKWVGKAGKNRAQG*GETTAIRKSNSEVT Trigger: TGTGACCTCTGAGTTACTCTTTCTGATGGCTGTTGTCTCCCCTCAGCCTTGGGCTCTGTTCTTCCCTGCTTTTCCCACCCACTTAGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
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| 3UTR CCA 90 bp | TGGATAGGTACTTGTCAAGTTTCTCAGGAAGTGTTCTCACCCAAGTaGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTTTTGACTAGC | + |
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Preference number: 1 (lower is better) Translates to: WIGTCQVSQEVFSPK*PTCSPSAGAAFLTS Trigger: GCTAGTCAAAAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCCACTTGGGTGAGAACACTTCCTGAGAAACTTGACAAGTACCTATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | AATCCCTATTTCAGAGGACCACAGGGTCTACTGGGTACGAGAAGGTaGCAGTCAGGGTGCTTTCCTACAGCTCTGACTTTGGATCTCACT | + |
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Preference number: 1 (lower is better) Translates to: NPYFRGPQGLLGTRR*QSGCFPTALTLDLT Trigger: AGTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCGTACCCAGTAGACCCTGTGGTCCTCTGAAATAGGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | TTGCGGGAGCACACTGCATCGGCTAGGGTAGAGGAACAGTTAGTGTaGGCAGGGCAGAATTCAGTTAGTTTTCAGCATTCTTCATCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LREHTASARVEEQLV*AGQNSVSFQHSSSA Trigger: GGCAGATGAAGAATGCTGAAAACTAACTGAATTCTGCCCTGCTCACACTAACTGTTCCTCTACCCTAGCCGATGCAGTGTGCTCCCGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| 3UTR GCA 90 bp | ATGTATCTCCTCGTGCTATCCCATCTAAAACAGAAGCTTAATCCATaGAAGAATTCTGTGAAGGCCGGAGCAGCATGTGGAGACTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: MYLLVLSHLKQKLNP*KNSVKAGAACGDWC Trigger: GCACCAGTCTCCACATGCTGCTCCGGCCTTCACAGAATTCTTGCATGGATTAAGCTTCTGTTTTAGATGGGATAGCACGAGGAGATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | TGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAACTaGCTGGTATGGCACACACAGTATGTCTTTTCTACAGCATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: CLQNGVRGSFDIECN*LVWHTQYVFSTASR Trigger: TCTGGATGCTGTAGAAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR GCA 90 bp | AGGGTTGTAAAGGGAGGAGACACCTTTTACCATGTGCGTTTGATTTaGCACAGCATCGGTGTTACCTACCACAGAATCCCTATTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RVVKGGDTFYHVRLI*HSIGVTYHRIPISE Trigger: CTCTGAAATAGGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTTACAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | ACCACCGCTGCTCGCGTGACATTAGAAGGGCTCCAAGAGCAACCATaGATACCAAACCCATTTACACTCTTCAGGCTAAAATATTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TTAARVTLEGLQEQP*IPNPFTLFRLKYSK Trigger: CTTTGAATATTTTAGCCTGAAGAGTGTAAATGGGTTTGGTATTCATGGTTGCTCTTGGAGCCCTTCTAATGTCACGCGAGCAGCGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
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| 3UTR CCA 90 bp | TACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAACTGACTaGTATGGCACACACAGTATGTCTTTTCTACAGCATCCAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: YRTGSEEALTLSVTD*YGTHSMSFLQHPEE Trigger: CTCTTCTGGATGCTGTAGAAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR GCA 90 bp | AACATACTCATGGACAGAGAAGAAAAGGAAAGAGAAATGTGCGAATaGCCAGCAGCAGTAACAACCTTTAGCAGGACCCATAACTACGCT | + |
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Preference number: 1 (lower is better) Translates to: NILMDREEKEREMCE*PAAVTTFSRTHNYA Trigger: AGCGTAGTTATGGGTCCTGCTAAAGGTTGTTACTGCTGCTGGGCATTCGCACATTTCTCTTTCCTTTTCTTCTCTGTCCATGAGTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
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| 3UTR CCA 90 bp | CCTATCTTATGCATCAAGACATGTAACACTGAGTTATATATATGCTaGAGACAAGAGAAGACTCGCCACTGTTCAGAGAGCAGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: PILCIKTCNTELYIC*RQEKTRHCSESSTH Trigger: ATGTGTGCTGCTCTCTGAACAGTGGCGAGTCTTCTCTTGTCTCCAGCATATATATAACTCAGTGTTACATGTCTTGATGCATAAGATAGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR TCA 90 bp | CTTTATCCACTCGAGAGCCTTGTTGAAGGATCATGTGTAAGTAGGTaGAAAACTGATTCTGCAACTAACATGAACACGTCATTCCAACGT | + |
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Preference number: 1 (lower is better) Translates to: LYPLESLVEGSCVSR*KTDSATNMNTSFQR Trigger: ACGTTGGAATGACGTGTTCATGTTAGTTGCAGAATCAGTTTTTCACCTACTTACACATGATCCTTCAACAAGGCTCTCGAGTGGATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR GCA 90 bp | CCTGGCACGGGACAGAAATCTGTATTTTCAGGACACACAGGAATATaGAACAAGTCAAAGTTTAACATACTCATGGACAGAGAAGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: PGTGQKSVFSGHTGI*NKSKFNILMDREEK Trigger: CTTTTCTTCTCTGTCCATGAGTATGTTAAACTTTGACTTGTTGCATATTCCTGTGTGTCCTGAAAATACAGATTTCTGTCCCGTGCCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
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| 3UTR CCA 90 bp | CAGAATCAACAGTGTCTTAACAACATACAAGCTGAACAATTAGCATaGGGAATCCGAGTACTAACTAGGGGAACCTTAATAGGCCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: QNQQCLNNIQAEQLA*GIRVLTRGTLIGQK Trigger: TTTTTGGCCTATTAAGGTTCCCCTAGTTAGTACTCGGATTCCCCATGCTAATTGTTCAGCTTGTATGTTGTTAAGACACTGTTGATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCACATGCCCTTCTTCCCCGTGGGACCCGCCTCCAAGGCCGCGAGAGAGCACTCCTCAAGGTGGGCTaGGGAAGCACTTCTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PAHALLPRGTRLQGRERALLKVG*GSTSQN Trigger: GTTCTGAGAAGTGCTTCCTCAGCCCACCTTGAGGAG...TGCTCTCTCGCGGCCTTGGAGGCGGGTCCCACGGGGAAGAAGGGCATGTGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCACCCTCCCTTCCTGGGGTaGAGCCAGGCCCTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VPGSASLKANPGQRLLSHPPFLG*SQALSQ Trigger: CTGAGATAGGGCCTGGCTCCACCCCAGGAAGGGAGG...GTGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| 3UTR CAA 90 bp | TCACCCAAGTGGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTTTaGACTAGCCGTGCTGGCTCTCCCTCCCTGCACATGCCCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPKWPTCSPSAGAAF*TSRAGSPSLHMPFF Trigger: GAAGAAGGGCATGTGCAGGGAGGGAGAGCCAGCACGGCTAGTCAAAAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCCACTTGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR TCA 90 bp | TCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTCTCCTAATCTCGAGCTaGGGCGGACGTGCATTATTG | + |
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Preference number: 2 (lower is better) Translates to: SPTPPAPCLASRAREATILLISS*GGRALL Trigger: CAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAG...AATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR TCA 90 bp | ACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTCTCCTAATCTCGAGCTaGGGCGGACGTGCATTATTG | + |
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Preference number: 2 (lower is better) Translates to: TDSPSPLLGQQGQRSHHCLLISS*GGRALL Trigger: CAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAG...ACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTTCAGCTCCTTCTGTaGCTGAGCTGCCCAGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: PQPPAWPAGPEKPPLFELLQLLL*LSCPVR Trigger: ACGGACTGGGCAGCTCAGGCACAGAAGGAGCTGAAG...GAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCACTGGCTCTGCAGTaGGCTTCCAAGGCTTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLGQQGQRSHHCLNSLALQ*ASKAFS Trigger: CGAGAAAGCCTTGGAAGCTCACTGCAGAGCCAGTGA...GTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| 3UTR CAA 90 bp | GTCACCTGCAGCTCTGACAGACAGGACCATCTGCCTGGCTTCGCCTaGCGGGAGCACACTGCATCGGCTAGGGTAGAGGAACAGTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VTCSSDRQDHLPGFA*REHTASARVEEQLV Trigger: CACTAACTGTTCCTCTACCCTAGCCGATGCAGTGTGCTCCCGCAAGGCGAAGCCAGGCAGATGGTCCTGTCTGTCAGAGCTGCAGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGCTCTTCACGCAGGGCAAAGGAGCCTCTTGGGACCTCTCACCACACTCGGCTGGGTACGAGAAGGTaGCAGTCAGGGTGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ACSSRRAKEPLGTSHHTRLGTRR*QSGCFP Trigger: AGGAAAGCACCCTGACTGTCACCTTCTCGTACCCAG...CCGAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCCTGCGTGAAGAGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCGAGCTGAGGCGGACGTaGATTATTGCCTACAGAACG | + |
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Preference number: 2 (lower is better) Translates to: PSPLLGQQGQRSHHCLNSELRRT*IIAYRT Trigger: CGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTC...GGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR CAA 90 bp | GTGGAGACTGGTGCGAACGCGGGCACCGCGCCTTTCCTCGCGAGCTaGGTGACATGTGCTTTTTCCAACAGAAAGAAAGGCTCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VETGANAGTAPFLAS*VTCAFSNRKKGSLR Trigger: CCTCAGTGAGCCTTTCTTTCTGTTGGAAAAAGCACATGTCACCAAGCTCGCGAGGAAAGGCGCGGTGCCCGCGTTCGCACCAGTCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACGCTTTCCTACAGCTCTaGCTTTGGATCTCACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLGQQGQRSHHCLNAFLQL*LWISLR Trigger: CCTGAGTGAGATCCAAAGTCAGAGCTGTAGGAAAGC...GTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGGAGGCAGCTCGGACTTaGGGCGCACGAGGGGACGAT | + |
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Preference number: 2 (lower is better) Translates to: ADVHYCLQNGVRGSFDIEEAART*GARGDD Trigger: ATCGTCCCCTCGTGCGCCGCAAGTCCGAGCTGCCTC...CTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGCTCTTCACGCAGGGCAAAGGAGCCTCTTGGGACCTCTCACCACACTCGGTCCTCGCGAGCTTGGTaGCATGTGCTTTTTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: ACSSRRAKEPLGTSHHTRSSRAW*HVLFPT Trigger: TGTTGGAAAAAGCACATGTCACCAAGCTCGCGAGGA...CCGAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCCTGCGTGAAGAGCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGAAGACTCGCCACTGTTCAGAGAGCAGCACACATTTCAAGCAGCTTTTCCCCAGCCCCCTGCTTaGCCAGCAGGGCCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TREDSPLFREQHTFQAAFPQPPA*PAGPEK Trigger: CTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGG...AAAAGCTGCTTGAAATGTGTGCTGCTCTCTGAACAGTGGCGAGTCTTCTCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTTGAGTGTAACTGACTaGTATGGCACACACAGTATG | + |
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Preference number: 2 (lower is better) Translates to: PSPLLGQQGQRSHHCLNSLSVTD*YGTHSM Trigger: CATACTGTGTGTGCCATACCAGTCAGTTACACTCAA...GGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR CCA 90 bp | AACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGTTGAGTGTAACTGACTaGTATGGCACACACAGTATG | + |
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Preference number: 2 (lower is better) Translates to: NMVMTLSPTPPAPCLASRLSVTD*YGTHSM Trigger: CATACTGTGTGTGCCATACCAGTCAGTTACACTCAA...CCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAGGGCTGTGCTGGGGTGGTGACAACATGGTGATGACACTGTCACCGACTGACATTGAGTGTAACTaGCTGGTATGGCACACACAG | + |
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Preference number: 2 (lower is better) Translates to: HSGLCWGGDNMVMTLSPTDIECN*LVWHTQ Trigger: CTGTGTGTGCCATACCAGTCAGTTACACTCAATGTC...AGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAAGTAGCCCGTGGGTCAGCTGTGGCCTGTCAGTTAAAGACAAGCAAACCCAGCTCACCCATGGCTaGAACACCAGCCCTGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: TSSSPWVSCGLSVKDKQTQLTHG*NTSPVY Trigger: GTAAACAGGGCTGGTGTTGCAGCCATGGGTGAGCTG...GGTTTGCTTGTCTTTAACTGACAGGCCACAGCTGACCCACGGGCTACTTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAAGAGAAGACTCGCCACTGTTCAGAGAGCAGCACACATTTCAAGCAGCTTTTCTCAGAACCCTCCCTTaGGCTGAGGTGGAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TREDSPLFREQHTFQAAFLRTLP*AEVEPW Trigger: CCAGGGTTCCACCTCAGCGCAAGGGAGGGTTCTGAG...AAAAGCTGCTTGAAATGTGTGCTGCTCTCTGAACAGTGGCGAGTCTTCTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGCTAACTTCTCGACTCTCACTGGGATCACTTCTCAAGCCTTTCCGCAGCCACTTGCTAAGTGGGTaGGAAAAGCAGGGAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: HRLTSRLSLGSLLKPFRSHLLSG*EKQGRT Trigger: TGTTCTTCCCTGCTTTTCCCACCCACTTAGCAAGTG...GCTGCGGAAAGGCTTGAGAAGTGATCCCAGTGAGAGTCGAGAAGTTAGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CAA 90 bp | GAAAGTGTTTTATTGCGGACATTTGCACATACAGTGTTAGTGACGTaGGCCTCCCTTCCTGGGGTGGAGCCAGGCCCTATCTCAGACATT | + |
|
Preference number: 2 (lower is better) Translates to: ESVLLRTFAHTVLVT*ASLPGVEPGPISDI Trigger: AATGTCTGAGATAGGGCCTGGCTCCACCCCAGGAAGGGAGGCCAACGTCACTAACACTGTATGTGCAAATGTCCGCAATAAAACACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCATTTATTGCGGACATTTaGACATACAGTGTTAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CPRLCQPKSQPWTEAAESFIADI*TYSVSD Trigger: GTCACTAACACTGTATGTGCAAATGTCCGCAATAAA...TGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGCTGCAAAGCTGTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACATTAGAGGTTACATCCTaGTGTTCTCTTTACCACATC | + |
|
Preference number: 2 (lower is better) Translates to: LWLQSCPRLCQPKSQPWTLEVTS*CSLYHI Trigger: GATGTGGTAAAGAGAACACCAGGATGTAACCTCTAA...TGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGACAGCTTTGCAGCCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR CAA 90 bp | AGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTaGACATTGAGTGTAACTGACTGGTATGGCACACACAGTATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RRTCIIAYRTGSEEA*TLSVTDWYGTHSMS Trigger: AGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGCTCTGACTTTGGATCTCACTCAGGGCTGTGCTGGGGTGGTGACAACATGTTGAGTGTAACTGACTaGTATGGCACACACAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: YSSDFGSHSGLCWGGDNMLSVTD*YGTHSM Trigger: CATACTGTGTGTGCCATACCAGTCAGTTACACTCAA...CATGTTGTCACCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTATCCAAGTGATAATTTGTTCTCTCCGTCCATCTCCACGTTTTCTAACTTCACGTAAGGACTTTCCATaGCCCGGAGGGAGAGCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RIQVIICSLRPSPRFLTSRKDFP*PGGRAV Trigger: CACCGCTCTCCCTCCGGGCCATGGAAAGTCCTTACG...TGAAGTTAGAAAACGTGGAGATGGACGGAGAGAACAAATTATCACTTGGATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CAA 90 bp | AGCGTCAGGGTTGTAAAGGGAGGAGACACCTTTTACCATGTGCGTTaGATTTGCCACAGCATCGGTGTTACCTACCACAGAATCCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: SVRVVKGGDTFYHVR*ICHSIGVTYHRIPI Trigger: AATAGGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTTACAACCCTGACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACTTAATTCACTGGATGAGTCAATCACACTTGCTAAGTGGGTGGGAAAAGCAGGGCTTAGCATGCCATaGTGCCTCGTGCATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RLNSLDESITLAKWVGKAGLSMP*CLVHPS Trigger: AGAAGGATGCACGAGGCACCATGGCATGCTAAGCCC...TGCTTTTCCCACCCACTTAGCAAGTGTGATTGACTCATCCAGTGAATTAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CAA 90 bp | CAGGGTTGTAAAGGGAGGAGACACCTTTTACCATGTGCGTTTGATTaGCCACAGCATCGGTGTTACCTACCACAGAATCCCTATTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QGCKGRRHLLPCAFD*PQHRCYLPQNPYFR Trigger: TCTGAAATAGGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTTACAACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCATTCGGACCAGCGGAGGCAACACCAAAGAGCTATGGCTGCAAAGCTGTCCAGGAAGTTACAAAGTTaGAAAGTGTTTTATTGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: DHSDQRRQHQRAMAAKLSRKLQS*KVFYCG Trigger: TCCGCAATAAAACACTTTCCAACTTTGTAACTTCCT...GGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTCCGCTGGTCCGAATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR CAA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATaGAGTGTAACTGACTGGTATGGCACACACAGTATGTCTTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TCIIAYRTGSEEALT*SVTDWYGTHSMSFL Trigger: TAGAAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAGTACAGTCAAGACTTAATTCACTGGATGAGTCAATCACACTTGCTAAGTGGGTTTCAACAGTGATCTaGCAAGGGCTTAGCATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RVQSRLNSLDESITLAKWVSTVI*QGLSMP Trigger: TGGCATGCTAAGCCCTTGGCAGATCACTGTTGAAAC...CCACTTAGCAAGTGTGATTGACTCATCCAGTGAATTAAGTCTTGACTGTACTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CAA 90 bp | TACAATGTTCAAAGGAAGCCATACAAAGCCACACTAGAAAGACACTaGAACTGTGACATCTCTGGCGCACAGACACGTTTTGGAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: YNVQRKPYKATLERH*NCDISGAQTRFGKS Trigger: ACTCTTTCCAAAACGTGTCTGTGCGCCAGAGATGTCACAGTTCAAGTGTCTTTCTAGTGTGGCTTTGTATGGCTTCCTTTGAACATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CAA 90 bp | ATAATCAGACACACGCAACAAGGAGAAAAGAAACACCCAGTAACATaGATCATTCGGAGCAGCAGAGGCAACACCCCAATAACTGATCAT | + |
|
Preference number: 2 (lower is better) Translates to: IIRHTQQGEKKHPVT*IIRSSRGNTPITDH Trigger: ATGATCAGTTATTGGGGTGTTGCCTCTGCTGCTCCGAATGATCAATGTTACTGGGTGTTTCTTTTCTCCTTGTTGCGTGTGTCTGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAACTGTACCTGGCACGGGACAGAAATCTGTATTTTCAGGACACACAGGAACTCCAAGAGCAACCATaGATACCAAACCCATTTACA | + |
|
Preference number: 2 (lower is better) Translates to: NKLYLARDRNLYFQDTQELQEQP*IPNPFT Trigger: TGTAAATGGGTTTGGTATTCATGGTTGCTCTTGGAG...TTCCTGTGTGTCCTGAAAATACAGATTTCTGTCCCGTGCCAGGTACAGTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CCA 72 bp | CTGGCTCTCCCTCCCTGCACATGCCCTTCTTCCCCGTaGGACCCGCCTCCAAGGCCGCGAGAGAGCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LALPPCTCPSSP*DPPPRPRESNV Trigger: GACATTGCTCTCTCGCGGCCTTGGAGGCGGGTCCCACGGGGAAGAAGGGCATGTGCAGGGAGGGAGAGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | GGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTTTTaGCTAGCCGTGCTGGCTCTCCCTCCCTGCACATGC | + |
|
Preference number: 3 (lower is better) Translates to: GQPVHPQLGPPF*LAVLALPPCTC Trigger: GCATGTGCAGGGAGGGAGAGCCAGCACGGCTAGTCAAAAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | AACAGAAAGAAAGGCTCACTGAGGGCGCCCACACAGTaGGGCCCGCAGTCAGGCCACAGGCAGCTGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NRKKGSLRAPTQ*GPQSGHRQLQA Trigger: AGCCTGCAGCTGCCTGTGGCCTGACTGCGGGCCGCACTGTGTGGGCGCCCTCAGTGAGCCTTTCTTTCTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | CTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTaGGGCGCACGAGGGGACGATCCTTCTTCAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSRCGGPEAART*GARGDDPSSAP Trigger: AGGAGCTGAAGAAGGATCGTCCCCTCGTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| 3UTR GCA 72 bp | GCTAGCGCCCGTCCTGGGAGAGCAGCTCACTGGCTCTaGAGTGAGCTTCCAAGGCTTTCTCGGTGTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ASARPGRAAHWL*SELPRLSRCGG Trigger: ACCCCCACACCGAGAAAGCCTTGGAAGCTCACTGCAGAGCCAGTGAGCTGCTCTCCCAGGACGGGCGCTAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| 3UTR GCA 72 bp | GCTGAGTCACCTGCAGCTCTGACAGACAGGACCATCTaGCTGGCTTCGCCTTGCGGGAGCACACTGCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: AESPAALTDRTI*LASPCGSTLHR Trigger: CCGATGCAGTGTGCTCCCGCAAGGCGAAGCCAGGCAGATGGTCCTGTCTGTCAGAGCTGCAGGTGACTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR CCA 72 bp | CTAACCAACCACCACGGGCGGCTGGCACAGCAAGCGTaGGGACAGCGTCAGGGTTGTAAAGGGAGGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: LTNHHGRLAQQA*GQRQGCKGRRH Trigger: GTGTCTCCTCCCTTTACAACCCTGACGCTGTCCCCACGCTTGCTGTGCCAGCCGCCCGTGGTGGTTGGTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | ATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTaGTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: MVMTLSPTPPAP*LASRAREATIV Trigger: AACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCACATGCCCTTCTTCCCCGTGGGACCCGCCTCCAAGGCCGCGAGAGAGCACCAGAGAAGCCACCATaGTTTGAACTCCTAATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PAHALLPRGTRLQGRERAPEKPP*FELLIS Trigger: CGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGG...TGCTCTCTCGCGGCCTTGGAGGCGGGTCCCACGGGGAAGAAGGGCATGTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | AGGTGGGCTGAGGAAGCACTTCTCAGAACCCTCCCTTaGGCTGAGGTGGAACCCTGGCCTCTACCACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RWAEEALLRTLP*AEVEPWPLPQT Trigger: AGTCTGTGGTAGAGGCCAGGGTTCCACCTCAGCGCAAGGGAGGGTTCTGAGAAGTGCTTCCTCAGCCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR-3UTR CAA 90 bp | CGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTCCAGAGAAGCCACCATaGTTTGAACTCCTAATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RLPQPPAWPAGPEKPPLFPEKPP*FELLIS Trigger: CGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGG...AAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CCA 72 bp | TGGGATCACTTCTCAAGCCTTTCCGCAGCTCACCCATaGCTGCAACACCAGCCCTGTTTACCTCCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WDHFSSLSAAHP*LQHQPCLPPQA Trigger: AGCCTGGGGAGGTAAACAGGGCTGGTGTTGCAGCCATGGGTGAGCTGCGGAAAGGCTTGAGAAGTGATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CCA 72 bp | ACAGGCCTGAATCCCCGTTTGCTCTCACTCCCAGCCTaGAGGACCTTCCTGGGTCTCATGCTGTCTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: TGLNPRLLSLPA*RTFLGLMLSST Trigger: AGTGGAAGACAGCATGAGACCCAGGAAGGTCCTCCAGGCTGGGAGTGAGAGCAAACGGGGATTCAGGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR TCA 72 bp | CGAGAAGGTGACAGTCAGGGTGCTTTCCTACAGCTCTaGCTTTGGATCTCACTCAGGGCTGTGCTGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: REGDSQGAFLQL*LWISLRAVLGW Trigger: CCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR TCA 72 bp | GGCTGTAAAACTGGAGTGTGGAAACTGTCTAGGCTCTaGGCCTTCACGGGACAGTGTGGACCACCGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GCKTGVWKLSRL*AFTGQCGPPLL Trigger: GAGCAGCGGTGGTCCACACTGTCCCGTGAAGGCTCAGAGCCTAGACAGTTTCCACACTCCAGTTTTACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR GCA 72 bp | GGGCACCGCGCCTTTCCTCGCGAGCTTGGTGACATGTaGTTTTTCCAACAGAAAGAAAGGCTCACTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GHRAFPRELGDM*FFQQKERLTEG Trigger: GCCCTCAGTGAGCCTTTCTTTCTGTTGGAAAAAGCACATGTCACCAAGCTCGCGAGGAAAGGCGCGGTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | GAACACGTCATTCCAACGTGGCGGTTCTCCTCAAGGTaGGCTGAGGAAGCACTTCTCAGAACCCTCCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EHVIPTWRFSSR*AEEALLRTLPC Trigger: GCAAGGGAGGGTTCTGAGAAGTGCTTCCTCAGCCCACCTTGAGGAGAACCGCCACGTTGGAATGACGTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | AAAGGAGCCTCTTGGGACCTCTCACCACACTCGGAATaGCCCACACGTCAGGGATATCTGAGACTCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGASWDLSPHSE*PTRQGYLRLYQ Trigger: CTGGTAGAGTCTCAGATATCCCTGACGTGTGGGGCATTCCGAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | TCAACAGTGATCTGCCAAGGGCTTAGCATGCCATGGTaGCTCGTGCATCCTTCTGAGATAGGGGTGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: STVICQGLSMPW*LVHPSEIGVKG Trigger: GCCCTTCACCCCTATCTCAGAAGGATGCACGAGGCACCATGGCATGCTAAGCCCTTGGCAGATCACTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CCA 72 bp | GGTGACCGTGCCATTAACCAAAGGAAAGAAACACTGTaGACGGCCCCAGCGCAAAAGTTGGCCTCTTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: GDRAINQRKETL*TAPAQKLASFP Trigger: CGGGAAAGAGGCCAACTTTTGCGCTGGGGCCGTCCACAGTGTTTCTTTCCTTTGGTTAATGGCACGGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | ATCATTCGGACCAGCGGAGGCAACACCAAAGAGCTATaGCTGCAAAGCTGTCCCAGGCTCTGCCAGCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IIRTSGGNTKEL*LQSCPRLCQPK Trigger: TTTAGGCTGGCAGAGCCTGGGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTCCGCTGGTCCGAATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCGAGGAAGCTTTGACATaGAGTGTAACTGACTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PQPPAWPAGPEKPPLFELEEALT*SVTDWY Trigger: ATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTC...GAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR GCA 72 bp | TCTCACTCCCAGCCTGGAGGACCTTCCTGGGTCTCATaGTGTCTTCCACTCCAGTACTTTTCCCTCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SHSQPGGPSWVS*CLPLQYFSLLS Trigger: AGATAGGAGGGAAAAGTACTGGAGTGGAAGACAGCATGAGACCCAGGAAGGTCCTCCAGGCTGGGAGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CCA 72 bp | TACAGCTCTGACTTTGGATCTCACTCAGGGCTGTGCTaGGGTGGTGACAACATGGTGATGACACTGTCACCG | + |
|
Preference number: 3 (lower is better) Translates to: YSSDFGSHSGLC*GGDNMVMTLSP Trigger: CGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CCA 72 bp | CTTCTCAGAACCCTCCCTTGCGCTGAGGTGGAACCCTaGCCTCTACCACAGACTATGAAATATGGCTTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LLRTLPCAEVEP*PLPQTMKYGFR Trigger: CCGAAAGCCATATTTCATAGTCTGTGGTAGAGGCCAGGGTTCCACCTCAGCGCAAGGGAGGGTTCTGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | ACTTGTCAAGTTTCTCAGGAAGTGTTCTCACCCAAGTaGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TCQVSQEVFSPK*PTCSPSAGAAF Trigger: AAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCCACTTGGGTGAGAACACTTCCTGAGAAACTTGACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | TTCAGAGGACCACAGGGTCTACTGGGTACGAGAAGGTaGCAGTCAGGGTGCTTTCCTACAGCTCTGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRGPQGLLGTRR*QSGCFPTALTL Trigger: CAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCGTACCCAGTAGACCCTGTGGTCCTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | CCACAGGCAGCTGCAGGCTGCACTAGGCCAAGGGGCTaGGTTTACTGTCACTTTCTACCAATGTGGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PQAAAGCTRPRG*VYCHFLPMWNS Trigger: AGAATTCCACATTGGTAGAAAGTGACAGTAAACTCAGCCCCTTGGCCTAGTGCAGCCTGCAGCTGCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | TCCTACAGCTCTGACTTTGGATCTCACTCAGGGCTGTaGTGGGGTGGTGACAACATGGTGATGACACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SYSSDFGSHSGL*WGGDNMVMTLS Trigger: TGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTGAGATCCAAAGTCAGAGCTGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAGCACTTCTCAGAACCCTCCCTTGCGCTGAGGTGGAACCCTGGCCTCTAGAGGAAGCTTTGACATaGAGTGTAACTGACTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: EEALLRTLPCAEVEPWPLEEALT*SVTDWY Trigger: ATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTC...TAGAGGCCAGGGTTCCACCTCAGCGCAAGGGAGGGTTCTGAGAAGTGCTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | GAGAAGCCACCATTGTTTGAACTCCTAATCTCGAGCTaGGGCGGACGTGCATTATTGCCTACAGAACGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EKPPLFELLISS*GGRALLPTERG Trigger: ACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CCA 72 bp | CACAGAATCCCTATTTCAGAGGACCACAGGGTCTACTaGGTACGAGAAGGTGACAGTCAGGGTGCTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HRIPISEDHRVY*VREGDSQGAFL Trigger: TAGGAAAGCACCCTGACTGTCACCTTCTCGTACCCAGTAGACCCTGTGGTCCTCTGAAATAGGGATTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | CGTCCATCTCCACGTTTTCTAACTTCAAGTAGCCCGTaGGTCAGCTGTGGCCTGTCAGTTAAAGACAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RPSPRFLTSSSP*VSCGLSVKDKQ Trigger: TTGCTTGTCTTTAACTGACAGGCCACAGCTGACCCACGGGCTACTTGAAGTTAGAAAACGTGGAGATGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCAAGTAGCCCGTGGGTCAGCTGTGGCCTGTCAGTTAAAGACAAGCAAACCATGAGTCAATCACACTaGCTAAGTGGGTGGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSSSPWVSCGLSVKDKQTMSQSH*LSGWEK Trigger: CTTTTCCCACCCACTTAGCAAGTGTGATTGACTCAT...GGTTTGCTTGTCTTTAACTGACAGGCCACAGCTGACCCACGGGCTACTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR GCA 72 bp | AAGGGAGGAGACACCTTTTACCATGTGCGTTTGATTTaGCACAGCATCGGTGTTACCTACCACAGAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGGDTFYHVRLI*HSIGVTYHRIP Trigger: AGGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | GATCTGTATTCCTGGGAAATAGTTTCAACAGTGATCTaGCAAGGGCTTAGCATGCCATGGTGCCTCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: DLYSWEIVSTVI*QGLSMPWCLVH Trigger: ATGCACGAGGCACCATGGCATGCTAAGCCCTTGGCAGATCACTGTTGAAACTATTTCCCAGGAATACAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTACAGAATCAACAGTGTCTTAACAACATACAAGCTGAACAATTAGCATGGGGGCAAAGGAGCCTCTaGGGACCTCTCACCACACTC | + |
|
Preference number: 3 (lower is better) Translates to: LVQNQQCLNNIQAEQLAWGQRSL*GPLTTL Trigger: GAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCC...CCATGCTAATTGTTCAGCTTGTATGTTGTTAAGACACTGTTGATTCTGTACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTATATATATGCTGGAGACAAGAGAAGACTCGCCACTGTTCAGAGAGCAGCACGGGTCAGAGGAAGCTTaGACATTGAGTGTAACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VIYMLETREDSPLFREQHGSEEA*TLSVTD Trigger: GTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCC...GTGCTGCTCTCTGAACAGTGGCGAGTCTTCTCTTGTCTCCAGCATATATATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | CACACTGCATCGGCTAGGGTAGAGGAACAGTTAGTGTaGGCAGGGCAGAATTCAGTTAGTTTTCAGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTASARVEEQLV*AGQNSVSFQHS Trigger: AGAATGCTGAAAACTAACTGAATTCTGCCCTGCTCACACTAACTGTTCCTCTACCCTAGCCGATGCAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR GCA 72 bp | CTCGTGCTATCCCATCTAAAACAGAAGCTTAATCCATaGAAGAATTCTGTGAAGGCCGGAGCAGCATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVLSHLKQKLNP*KNSVKAGAACG Trigger: TCCACATGCTGCTCCGGCCTTCACAGAATTCTTGCATGGATTAAGCTTCTGTTTTAGATGGGATAGCACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | GAGGAGAGGAGCGAGTACAGTCAAGACTTAATTCACTaGATGAGTCAATCACACTTGCTAAGTGGGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EERSEYSQDLIH*MSQSHLLSGWE Trigger: TTCCCACCCACTTAGCAAGTGTGATTGACTCATCCAGTGAATTAAGTCTTGACTGTACTCGCTCCTCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTACAATCTTAGAGGTTACATCCTGGTGTTCTCTTTACCACATCACATCTTAACAGTGTTAGTGACGTaGGCCTCCCTTCCTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HYNLRGYILVFSLPHHILTVLVT*ASLPGV Trigger: CACCCCAGGAAGGGAGGCCAACGTCACTAACACTGT...TAAGATGTGATGTGGTAAAGAGAACACCAGGATGTAACCTCTAAGATTGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| 3UTR TCA 72 bp | GCTCGCGTGACATTAGAAGGGCTCCAAGAGCAACCATaGATACCAAACCCATTTACACTCTTCAGGCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARVTLEGLQEQP*IPNPFTLFRLK Trigger: TTTTAGCCTGAAGAGTGTAAATGGGTTTGGTATTCATGGTTGCTCTTGGAGCCCTTCTAATGTCACGCGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CCA 72 bp | GGGTCAGAGGAAGCTTTGACATTGAGTGTAACTGACTaGTATGGCACACACAGTATGTCTTTTCTACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSEEALTLSVTD*YGTHSMSFLQH Trigger: ATGCTGTAGAAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CCA 72 bp | TGCATCAAGACATGTAACACTGAGTTATATATATGCTaGAGACAAGAGAAGACTCGCCACTGTTCAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CIKTCNTELYIC*RQEKTRHCSES Trigger: GCTCTCTGAACAGTGGCGAGTCTTCTCTTGTCTCCAGCATATATATAACTCAGTGTTACATGTCTTGATGCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR TCA 72 bp | CTCGAGAGCCTTGTTGAAGGATCATGTGTAAGTAGGTaGAAAACTGATTCTGCAACTAACATGAACACGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LESLVEGSCVSR*KTDSATNMNTS Trigger: TGACGTGTTCATGTTAGTTGCAGAATCAGTTTTTCACCTACTTACACATGATCCTTCAACAAGGCTCTCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR GCA 72 bp | TTATGCATCAAGACATGTAACACTGAGTTATATATATaGTGGAGACAAGAGAAGACTCGCCACTGTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCIKTCNTELYI*WRQEKTRHCSE Trigger: CTCTGAACAGTGGCGAGTCTTCTCTTGTCTCCAGCATATATATAACTCAGTGTTACATGTCTTGATGCATAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CCA 72 bp | CAGTGTCTTAACAACATACAAGCTGAACAATTAGCATaGGGAATCCGAGTACTAACTAGGGGAACCTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: QCLNNIQAEQLA*GIRVLTRGTLI Trigger: TATTAAGGTTCCCCTAGTTAGTACTCGGATTCCCCATGCTAATTGTTCAGCTTGTATGTTGTTAAGACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR TCA 90 bp | CATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCTCACTGGCTCTGCAGTaGGCTTCCAAGGCTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HGDDTVTDSPSPLLGQQGSLALQ*ASKAFS Trigger: CGAGAAAGCCTTGGAAGCTCACTGCAGAGCCAGTGA...GCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTGCGGCGCACGGAACATCTCGAATGTaGAGAAGGGCCACGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQGFLGVGVLRQLGLAAHGTSRM*RRATGW Trigger: CCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCC...GTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCTTGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | TGGCCAACCTGTTCACCCTCAGCTGGGGCCGCCTTTTaGACTAGCCGTGCTGGCTCTCCCTCCCTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: WPTCSPSAGAAF*TSRAGSPSLHM Trigger: CATGTGCAGGGAGGGAGAGCCAGCACGGCTAGTCAAAAAGGCGGCCCCAGCTGAGGGTGAACAGGTTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CAA 72 bp | GCGCGTGCATCACTCCTGACAGGCCTGAATCCCCGTTaGCTCTCACTCCCAGCCTGGAGGACCTTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLTGLNPR*LSLPAWRTFLG Trigger: ACCCAGGAAGGTCCTCCAGGCTGGGAGTGAGAGCAAACGGGGATTCAGGCCTGTCAGGAGTGATGCACGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAGCATCCAGAAGAGAACCGACAGGCCCAGCTCGGCGTGCTGCTCCAGACCCATTGCGACCGGAATaGTCACGGCGCTGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: STASRREPTGPARRAAPDPLRPE*SRRWLD Trigger: GTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGG...GTCTGGAGCAGCACGCCGAGCTGGGCCTGTCGGTTCTCTTCTGGATGCTGTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACCCCATCTGTCTCCATTaGGACCGGAATGCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLGQQGQRSHHCLNPICLH*DRNAHG Trigger: GCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGG...GTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GACAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCCTTCAGCTCCTTCTGTaGCTGACGAGCCTCGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNMVMTLSPTPPAPCLASLQLLL*LTSLVA Trigger: AGCGACGAGGCTCGTCAGGCACAGAAGGAGCTGAAG...GCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084985.11 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTGTGCTGGGGTGGTGACAACATGGTGATGACACTGTCACCGACTCCCAAGGCCCGTTGGAGCTaGCCGCATCCACCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLCWGGDNMVMTLSPTPKARWS*PHPPPS Trigger: GGATGGTGGTGGATGCGGCCAGCTCCAACGGGCCTT...GGGAGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | CAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGGAGAGCAGCTCACTaGCTCTGCAGTGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHGDDTVTDSPSPLLGQQGRAAH*LCSELP Trigger: TGGAAGCTCACTGCAGAGCCAGTGAGCTGCTCTCCC...CTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTGCACATGCCCTTCTTCCCCGTGGGACCCGCCTCCAAGGCCGCGAGAGGGAAAAGAGGCTCCATaGTCTTCACAAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PPCTCPSSPWDPPPRPREGKEAP*SSQTLM Trigger: CATCAGAGTTTGTGAAGATCATGGAGCCTCTTTTCC...CTCTCGCGGCCTTGGAGGCGGGTCCCACGGGGAAGAAGGGCATGTGCAGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTGCGGCGCACCCACCACCATCCCGCTaGCCGCTTTATTACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQGFLGVGVLRQLGLAAHPPPSR*PLYYMS Trigger: TGACATGTAATAAAGCGGGCAGCGGGATGGTGGTGG...GTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCTTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCACCTGGGAACATCTCGAATGTaGAGAAGGGCCACGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSASLKANPGQRLLSHLGTSRM*RRATGW Trigger: CCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCC...CAGGTGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTGCGGCGCACTTGCGTGGCTGTCATaGCTTTTCTCCCGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPRLSRCGGPEAARTCGALAWLS*LFSRPT Trigger: AGTTGGTCGGGAGAAAAGCCATGACAGCCACGCAAG...TGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | AGCTCTGACAGACAGGACCATCTGCCTGGCTTCGCCTaGCGGGAGCACACTGCATCGGCTAGGGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDRQDHLPGFA*REHTASARVEE Trigger: TTCCTCTACCCTAGCCGATGCAGTGTGCTCCCGCAAGGCGAAGCCAGGCAGATGGTCCTGTCTGTCAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTGCGGCGCACGAGGGGGAAAAGAGGCTCCATaGTCTTCACAAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLSRCGGPEAARTCGARGGKEAP*SSQTLM Trigger: CATCAGAGTTTGTGAAGATCATGGAGCCTCTTTTCC...CCCTCGTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | ACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTACACCTTCCTGACTTaGGTGGCTGTCATGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDSPSPLLGQQGQRSHHCYTFLT*VAVMAF Trigger: AAAAGCCATGACAGCCACGCAAGTCAGGAAGGTGTA...ACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | GATCATTCGGACCAGCGGAGGCAACACCAAAGAGCTATGGCTGCAAAGCTGTCCAAGGCCCGTTGGAGCTaGCCGCATCCACCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DHSDQRRQHQRAMAAKLSKARWS*PHPPPS Trigger: GGATGGTGGTGGATGCGGCCAGCTCCAACGGGCCTT...GGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTCCGCTGGTCCGAATGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTGGAAAGGCCCGTTaGAGCTGGCCGCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NLELRRTCIIAYRTGSEEAGKAR*SWPHPP Trigger: TGGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGC...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGGCTGTGCTGGGGTGGTGACAACATGGTGATGACACTGTCACCGACTGGAACATCTCGAATGTaGAGAAGGGCCACGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGLCWGGDNMVMTLSPTGTSRM*RRATGW Trigger: CCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCC...AGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCGAATGCTCACGGCGCTaGCTTGACTATACACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQPPAWPAGPEKPPLFELECSRR*LDYTLH Trigger: ATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTC...GAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | CAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGAATGCTCACGGCGCTaGCTTGACTATACACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHGDDTVTDSPSPLLGQQECSRR*LDYTLH Trigger: ATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTC...CTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | GGTGCGAACGCGGGCACCGCGCCTTTCCTCGCGAGCTaGGTGACATGTGCTTTTTCCAACAGAAAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GANAGTAPFLAS*VTCAFSNRKKG Trigger: GCCTTTCTTTCTGTTGGAAAAAGCACATGTCACCAAGCTCGCGAGGAAAGGCGCGGTGCCCGCGTTCGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | CAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGTCCTTCTCTAAAAACTaGACGACACAGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHGDDTVTDSPSPLLGQQSFSKN*TTQYAS Trigger: GCTGGCGTACTGTGTCGTGCAGTTTTTAGAGAAGGA...CTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GACAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCTCCTTCTCTAAAAACTaGACGACACAGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DNMVMTLSPTPPAPCLASSFSKN*TTQYAS Trigger: GCTGGCGTACTGTGTCGTGCAGTTTTTAGAGAAGGA...GCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | CATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCTCTTTGAGTTTCTCTaGTTTGAACTGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGDDTVTDSPSPLLGQQGLFEFL*FELLSA Trigger: TGCACTCAGCAGTTCAAAGCAGAGAAACTCAAAGAG...GCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTAATCTCGAGCGGAACATCTCGAATGTaGAGAAGGGCCACGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWPAGPEKPPLFELLISSGTSRM*RRATGW Trigger: CCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCC...GCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGCCAGTATTTGAGAAGTaGCATTACCACTGGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSPSPLLGQQGQRSHHCLPVFEK*HYHWFS Trigger: ACTGAACCAGTGGTAATGGCACTTCTCAAATACTGG...CAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAACCCATCTGTCTCCATTaGGACCGGAATGCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLELRRTCIIAYRTGSEEPICLH*DRNAHG Trigger: GCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGG...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACGGCTGGAAACACATTTaGCTAACTGTCGGAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLGQQGQRSHHCLNGWKHI*LTVGKE Trigger: CTCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCC...GTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTCTCGGTGTGGGGGTCCTGAGGCAGCTCGGACTTGCGGCGCACGAGGGTCATCGAAGAGTTTTTaGTTCATCTCCATGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSRCGGPEAARTCGARGSSKSF*FISMKS Trigger: ACTCTTCATGGAGATGAACCAAAAACTCTTCGATGA...CCCTCGTGCGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCGAGAAAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGGGAGAGCAGCTCACTaGCTCTGCAGTGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLELRRTCIIAYRTGSEEGRAAH*LCSELP Trigger: TGGAAGCTCACTGCAGAGCCAGTGAGCTGCTCTCCC...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR TCA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAATCACTGGCTCTGCAGTaGGCTTCCAAGGCTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLELRRTCIIAYRTGSEESLALQ*ASKAFS Trigger: CGAGAAAGCCTTGGAAGCTCACTGCAGAGCCAGTGA...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTAATCTCGAGCCCACCACCATCCCGCTaGCCGCTTTATTACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWPAGPEKPPLFELLISSPPPSR*PLYYMS Trigger: TGACATGTAATAAAGCGGGCAGCGGGATGGTGGTGG...GCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GACAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCCCAGTATTTGAGAAGTaGCATTACCACTGGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DNMVMTLSPTPPAPCLASPVFEK*HYHWFS Trigger: ACTGAACCAGTGGTAATGGCACTTCTCAAATACTGG...GCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | CAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGCTCTTTGAGTTTCTCTaGTTTGAACTGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHGDDTVTDSPSPLLGQQLFEFL*FELLSA Trigger: TGCACTCAGCAGTTCAAAGCAGAGAAACTCAAAGAG...CTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | TACGAGAAGGTGACAGTCAGGGTGCTTTCCTACAGCTCTGACTTTGGATCTCACCCATTGCGACCGGAATaGTCACGGCGCTGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YEKVTVRVLSYSSDFGSHPLRPE*SRRWLD Trigger: GTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGG...GTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAGAGGCAGCTCGGACTTaGGGCGCACGAGGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCIIAYRTGSEEALTLSVEAART*GARGDD Trigger: ATCGTCCCCTCGTGCGCCGCAAGTCCGAGCTGCCTC...TACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCACGGCTGGAAACACATTTaGCTAACTGTCGGAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGSASLKANPGQRLLSHGWKHI*LTVGKE Trigger: CTCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCC...GTGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | CATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCTCATCGAAGAGTTTTTaGTTCATCTCCATGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGDDTVTDSPSPLLGQQGSSKSF*FISMKS Trigger: ACTCTTCATGGAGATGAACCAAAAACTCTTCGATGA...GCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCATCGGTGTTACCTACCACAGAATCCCTATTTCAGAGGACCACAGGGCCACCACCATCCCGCTaGCCGCTTTATTACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATASVLPTTESLFQRTTGPPPSR*PLYYMS Trigger: TGACATGTAATAAAGCGGGCAGCGGGATGGTGGTGG...CCCTGTGGTCCTCTGAAATAGGGATTCTGTGGTAGGTAACACCGATGCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | AGCTATGGCTGCAAAGCTGTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGATCCTTCTCTAAAAACTaGACGACACAGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYGCKAVPGSASLKANPGSFSKN*TTQYAS Trigger: GCTGGCGTACTGTGTCGTGCAGTTTTTAGAGAAGGA...TCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGACAGCTTTGCAGCCATAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR GCA 90 bp | GCATGCTCTTCACGCAGGGCAAAGGAGCCTCTTGGGACCTCTCACCACACTCGGCCAGTATTTGAGAAGTaGCATTACCACTGGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSSRRAKEPLGTSHHTRPVFEK*HYHWFS Trigger: ACTGAACCAGTGGTAATGGCACTTCTCAAATACTGG...CCGAGTGTGGTGAGAGGTCCCAAGAGGCTCCTTTGCCCTGCGTGAAGAGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCACCTGCCAGTATTTGAGAAGTaGCATTACCACTGGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSASLKANPGQRLLSHLPVFEK*HYHWFS Trigger: ACTGAACCAGTGGTAATGGCACTTCTCAAATACTGG...CAGGTGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTTGCCACAGCATCGGTGTTACCTACCACAGAATCCCTATTTCAGAGGACAAGGCCCGTTGGAGCTaGCCGCATCCACCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LICHSIGVTYHRIPISEDKARWS*PHPPPS Trigger: GGATGGTGGTGGATGCGGCCAGCTCCAACGGGCCTT...GTCCTCTGAAATAGGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | TGGTATGGCACACACAGTATGTCTTTTCTACAGCATCCAGAAGAGAACCGACAGAAGGCCCGTTGGAGCTaGCCGCATCCACCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WYGTHSMSFLQHPEENRQKARWS*PHPPPS Trigger: GGATGGTGGTGGATGCGGCCAGCTCCAACGGGCCTT...CTGTCGGTTCTCTTCTGGATGCTGTAGAAAAGACATACTGTGTGTGCCATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR TCA 90 bp | CTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTGGAAAAGAGGCTCCATaGTCTTCACAAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LELRRTCIIAYRTGSEEAGKEAP*SSQTLM Trigger: CATCAGAGTTTGTGAAGATCATGGAGCCTCTTTTCC...AGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCAACACCAAAGAGCTATGGCTGCAAAGCTGTCCCAGGCTCTGCCAGCCTAGGAAAAGAGGCTCCATaGTCTTCACAAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EATPKSYGCKAVPGSASLGKEAP*SSQTLM Trigger: CATCAGAGTTTGTGAAGATCATGGAGCCTCTTTTCC...TAGGCTGGCAGAGCCTGGGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | CGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTTTTGCTATATTGGGTTaGAAATCTGGAGACTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLPQPPAWPAGPEKPPLFFAILG*KSGDSK Trigger: TTTAGAGTCTCCAGATTTCCAACCCAATATAGCAAA...AAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTAATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCATGCACATCTTCAAACTaGGGCCCATCTGTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TPNLELRRTCIIAYRTGSCTSSN*GPSVSI Trigger: AATGGAGACAGATGGGCCTCAGTTTGAAGATGTGCA...TGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCTTTGACATTGAGTGTAACTGACTGGTATGGCACACACAGTATGTCTTTTGAGGCAGCTCGGACTTaGGGCGCACGAGGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: EALTLSVTDWYGTHSMSFEAART*GARGDD Trigger: ATCGTCCCCTCGTGCGCCGCAAGTCCGAGCTGCCTC...AAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | GACAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCTTTGCTATATTGGGTTaGAAATCTGGAGACTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DNMVMTLSPTPPAPCLASFAILG*KSGDSK Trigger: TTTAGAGTCTCCAGATTTCCAACCCAATATAGCAAA...GCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTCGGAACATGTTAACTaGAAACATGTGGACGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADVHYCLQNGVRGSFDIESEHVN*KHVDGL Trigger: GAGGCCGTCCACATGTTTGCAGTTAACATGTTCCGA...CTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR GCA 90 bp | GATCATTCGGACCAGCGGAGGCAACACCAAAGAGCTATGGCTGCAAAGCTGTCCCTCTTTGAGTTTCTCTaGTTTGAACTGCTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DHSDQRRQHQRAMAAKLSLFEFL*FELLSA Trigger: TGCACTCAGCAGTTCAAAGCAGAGAAACTCAAAGAG...GGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTCCGCTGGTCCGAATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR GCA 90 bp | GTTATATATATGCTGGAGACAAGAGAAGACTCGCCACTGTTCAGAGAGCAGCACCTTCAGCTCCTTCTGTaGCTGGGGATTCGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIYMLETREDSPLFREQHLQLLL*LGIRFG Trigger: GCCAAAGCGAATCCCCAGGCACAGAAGGAGCTGAAG...GTGCTGCTCTCTGAACAGTGGCGAGTCTTCTCTTGTCTCCAGCATATATATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTTGTAAAGGGAGGAGACACCTTTTACCATGTGCGTTTGATTTGCCACAAGTGCCATTACCACTaGTTCAGTGAGGGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVVKGGDTFYHVRLICHKCHYH*FSEGAV Trigger: GACAGCACCCTCACTGAACCAGTGGTAATGGCACTT...GTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTTACAACCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CAA 72 bp | AAAGGGAGGAGACACCTTTTACCATGTGCGTTTGATTaGCCACAGCATCGGTGTTACCTACCACAGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRRHLLPCAFD*PQHRCYLPQNP Trigger: GGGATTCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR GCA 90 bp | GACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTTCCTTCTCTAAAAACTaGACGACACAGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVHYCLQNGVRGSFDIECSFSKN*TTQYAS Trigger: GCTGGCGTACTGTGTCGTGCAGTTTTTAGAGAAGGA...ACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAAAGTGCCATTACCACTaGTTCAGTGAGGGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TCIIAYRTGSEEALTLSVKCHYH*FSEGAV Trigger: GACAGCACCCTCACTGAACCAGTGGTAATGGCACTT...TACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGGAGAGGAGCGAGTACAGTCAAGACTTAATTCACTGGATGAGTCAATCCCATTTCGAGCTCTGTaGCTCCAGCTCTTAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGGEERVQSRLNSLDESIPFRAL*LQLLDS Trigger: ACTGTCTAAGAGCTGGAGTCACAGAGCTCGAAATGG...GATTGACTCATCCAGTGAATTAAGTCTTGACTGTACTCGCTCCTCTCCTCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| 3UTR CAA 72 bp | ATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATaGAGTGTAACTGACTGGTATGGCACACACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: IAYRTGSEEALT*SVTDWYGTHSM Trigger: CATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | TGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTaGACATTGAGTGTAACTGACTGGTATGGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: CIIAYRTGSEEA*TLSVTDWYGTH Trigger: GTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | GTTGTAAAGGGAGGAGACACCTTTTACCATGTGCGTTaGATTTGCCACAGCATCGGTGTTACCTACCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVKGGDTFYHVR*ICHSIGVTYHR Trigger: TCTGTGGTAGGTAACACCGATGCTGTGGCAAATCAAACGCACATGGTAAAAGGTGTCTCCTCCCTTTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| 3UTR CAA 72 bp | CACACGCAACAAGGAGAAAAGAAACACCCAGTAACATaGATCATTCGGAGCAGCAGAGGCAACACCCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HTQQGEKKHPVT*IIRSSRGNTPI Trigger: TATTGGGGTGTTGCCTCTGCTGCTCCGAATGATCAATGTTACTGGGTGTTTCTTTTCTCCTTGTTGCGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCTAATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCATTTGCTATATTGGGTTaGAAATCTGGAGACTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPNLELRRTCIIAYRTGSFAILG*KSGDSK Trigger: TTTAGAGTCTCCAGATTTCCAACCCAATATAGCAAA...TGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATTAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAGGCTGGAAACACATTTaGCTAACTGTCGGAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCIIAYRTGSEEALTLSVGWKHI*LTVGKE Trigger: CTCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCC...TACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATGGCACACACAGTATGTCTTTTCTACAGCATCCAGAAGAGAACCGACAGGGCTGGAAACACATTTaGCTAACTGTCGGAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WYGTHSMSFLQHPEENRQGWKHI*LTVGKE Trigger: CTCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCC...CTGTCGGTTCTCTTCTGGATGCTGTAGAAAAGACATACTGTGTGTGCCATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | CAAAGGAAGCCATACAAAGCCACACTAGAAAGACACTaGAACTGTGACATCTCTGGCGCACAGACACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRKPYKATLERH*NCDISGAQTRF Trigger: AAAACGTGTCTGTGCGCCAGAGATGTCACAGTTCAAGTGTCTTTCTAGTGTGGCTTTGTATGGCTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTTGACATTGAGTGTAACTGACTGGTATGGCACACACAGTATGTCTTTTAAGTGCCATTACCACTaGTTCAGTGAGGGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EALTLSVTDWYGTHSMSFKCHYH*FSEGAV Trigger: GACAGCACCCTCACTGAACCAGTGGTAATGGCACTT...AAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
||
| 3UTR CAA 72 bp | AGTCAAGACTTAATTCACTGGATGAGTCAATCACACTaGCTAAGTGGGTGGGAAAAGCAGGGAAGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQDLIHWMSQSH*LSGWEKQGRTE Trigger: CTCTGTTCTTCCCTGCTTTTCCCACCCACTTAGCAAGTGTGATTGACTCATCCAGTGAATTAAGTCTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222276.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGGAACACGGTTCAAGTGACAGCATCTATGACATTCGAGCAAGAAAGGACATCATCGAAGAGTTTTTaGTTCATCTCCATGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRNTVQVTASMTFEQERTSSKSF*FISMKS Trigger: ACTCTTCATGGAGATGAACCAAAAACTCTTCGATGA...TGTCCTTTCTTGCTCGAATGTCATAGATGCTGTCACTTGAACCGTGTTCCTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR GCA 90 bp | CGTGTGGCAAATAAGTACTTATACAAGAGGAAGTTACAAAGTTGGAAAGTGTTTCCACCACCATCCCGCTaGCCGCTTTATTACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVANKYLYKRKLQSWKVFPPPSR*PLYYMS Trigger: TGACATGTAATAAAGCGGGCAGCGGGATGGTGGTGG...AAACACTTTCCAACTTTGTAACTTCCTCTTGTATAAGTACTTATTTGCCACACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | CGTGTGGCAAATAAGTACTTATACAAGAGGAAGTTACAAAGTTGGAAAGTGTTTAAGTGCCATTACCACTaGTTCAGTGAGGGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVANKYLYKRKLQSWKVFKCHYH*FSEGAV Trigger: GACAGCACCCTCACTGAACCAGTGGTAATGGCACTT...AAACACTTTCCAACTTTGTAACTTCCTCTTGTATAAGTACTTATTTGCCACACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGAGGACAAGAAGACAAAGCACTAAGTTTAAGGATGTATCTCCTCGTGCTTCATCGAAGAGTTTTTaGTTCATCTCCATGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PERTRRQSTKFKDVSPRASSKSF*FISMKS Trigger: ACTCTTCATGGAGATGAACCAAAAACTCTTCGATGA...AGCACGAGGAGATACATCCTTAAACTTAGTGCTTTGTCTTCTTGTCCTCTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| 3UTR CAA 72 bp | ATACAAGAGGAAGTTACAAAGTTGGAAAGTGTTTTATaGCGGACATTTGCACATACAGTGTTAGTGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: IQEEVTKLESVL*RTFAHTVLVTL Trigger: CAACGTCACTAACACTGTATGTGCAAATGTCCGCAATAAAACACTTTCCAACTTTGTAACTTCCTCTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS-3UTR CCA 90 bp | CATTACAATCTTAGAGGTTACATCCTGGTGTTCTCTTTACCACATCACATCTTATTTGCTATATTGGGTTaGAAATCTGGAGACTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: HYNLRGYILVFSLPHHILFAILG*KSGDSK Trigger: TTTAGAGTCTCCAGATTTCCAACCCAATATAGCAAA...TAAGATGTGATGTGGTAAAGAGAACACCAGGATGTAACCTCTAAGATTGTAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| 3UTR CAA 72 bp | AATTATAGATTTCATAATGGTAAAGTGGATAGGTACTaGTCAAGTTTCTCAGGAAGTGTTCTCACCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: NYRFHNGKVDRY*SSFSGSVLTQV Trigger: CACTTGGGTGAGAACACTTCCTGAGAAACTTGACAAGTACCTATCCACTTTACCATTATGAAATCTATAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| CDS-3UTR CAA 90 bp | TCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGCCCATCTGTCTCCATaGCGACCGGAATGCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: SPTPPAPCLASRAREATIAHLSP*RPECSR Trigger: CCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGC...AATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | GACAACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCGCCCATCTGTCTCCATaGCGACCGGAATGCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: DNMVMTLSPTPPAPCLASAHLSP*RPECSR Trigger: CCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGC...GCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGGCTGGAAAGGCCCGTaGGAGCTGGCCGCATCCACC | + |
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Preference number: 5 (lower is better) Translates to: RAEADVHYCLQNGVRGSFGWKGP*ELAAST Trigger: GGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCC...AAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCTGTTCCAGTGGGTCTTaGAGTTGCGGTATAAGGACG | + |
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Preference number: 5 (lower is better) Translates to: HGDDTVTDSPSPLLGQQGCSSGS*SCGIRT Trigger: CGTCCTTATACCGCAACTCAAAGACCCACTGGAACA...GCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | AACATGGTGATGACACTGTCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCTCACGGCGCTGGCTaGACTATACACTGCATACTG | + |
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Preference number: 5 (lower is better) Translates to: NMVMTLSPTPPAPCLASRAHGAG*TIHCIL Trigger: CAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGC...CCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGACAGTGTCATCACCATGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCGTGATCACGTTCCGGTaGTGGGTGATATACTCCACC | + |
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Preference number: 5 (lower is better) Translates to: PSPLLGQQGQRSHHCLNSVITFR*WVIYST Trigger: GGTGGAGTATATCACCCACAACCGGAACGTGATCAC...GGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | TCACCGACTCCCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGGGCTGGAAACACATTaGGCTAACTGTCGGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: SPTPPAPCLASRAREATIGLETH*ANCRKR Trigger: TCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCCC...AATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGGGAGTCGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CAGCATCCAGAAGAGAACCGACAGGCCCAGCTCGGCGTGCTGCTCCAGACGCTATGTTCCAGTGGGTCTTaGAGTTGCGGTATAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QHPEENRQAQLGVLLQTLCSSGS*SCGIRT Trigger: CGTCCTTATACCGCAACTCAAAGACCCACTGGAACA...TAGCGTCTGGAGCAGCACGCCGAGCTGGGCCTGTCGGTTCTCTTCTGGATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CGGAGGAACACGGTTCAAGTGACAGCATCTATGACATTCGAGCAAGAAAGGACAGGCTGGAAAGGCCCGTaGGAGCTGGCCGCATCCACC | + |
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Preference number: 5 (lower is better) Translates to: RRNTVQVTASMTFEQERTGWKGP*ELAAST Trigger: GGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCC...TGTCCTTTCTTGCTCGAATGTCATAGATGCTGTCACTTGAACCGTGTTCCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS-3UTR CAA 90 bp | TGGTATGGCACACACAGTATGTCTTTTCTACAGCATCCAGAAGAGAACCGACAGGGCTGGAAAGGCCCGTaGGAGCTGGCCGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WYGTHSMSFLQHPEENRQGWKGP*ELAAST Trigger: GGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCC...CTGTCGGTTCTCTTCTGGATGCTGTAGAAAAGACATACTGTGTGTGCCATACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAGGCTGGAAAGGCCCGTaGGAGCTGGCCGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TCIIAYRTGSEEALTLSVGWKGP*ELAAST Trigger: GGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCC...TACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS GCA 90 bp | GCACATCTTCAAACTGAGGCCCATCTGTCTCCATTGCGACCGGAATaGTCACGGCGCTGGCTTGACTATACACTGCATACTGGGGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: AHLQTEAHLSPLRPE*SRRWLDYTLHTGDS Trigger: CGAATCCCCAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTGAAGATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS CCA 90 bp | ACTGAGGCCCATCTGTCTCCATTGCGACCGGAATGCTCACGGCGCTaGCTTGACTATACACTGCATACTGGGGATTCGCTTTGGCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TEAHLSPLRPECSRR*LDYTLHTGDSLWLD Trigger: ATCTAGCCAAAGCGAATCCCCAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCAGGCTCTGCCAGCCTAAAAGCCAACCCTGGACAGAGGCTGCTGAGTCAGGGCTGGAAACACATTaGGCTAACTGTCGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPRLCQPKSQPWTEAAESGLETH*ANCRKR Trigger: TCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCCC...TGACTCAGCAGCCTCTGTCCAGGGTTGGCTTTTAGGCTGGCAGAGCCTGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAACACCAAAGAGCTATGGCTGCAAAGCTGTCCCAGGCTCTGCCAGCCTATGTTCCAGTGGGTCTTaGAGTTGCGGTATAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: EATPKSYGCKAVPGSASLCSSGS*SCGIRT Trigger: CGTCCTTATACCGCAACTCAAAGACCCACTGGAACA...TAGGCTGGCAGAGCCTGGGACAGCTTTGCAGCCATAGCTCTTTGGTGTTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCCCCTGCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCGTCATCGAAGAGTTTTaGGTTCATCTCCATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQPPAWPAGPEKPPLFELVIEEF*VHLHEE Trigger: CTCTTCATGGAGATGAACCAAAAACTCTTCGATGAC...GAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGCAGGGGGCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTCACGGCGCTGGCTaGACTATACACTGCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: NLELRRTCIIAYRTGSEEAHGAG*TIHCIL Trigger: CAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGC...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGCTACACCTTCCTGACTaGCGTGGCTGTCATGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELRRTCIIAYRTGSEEALLHLPD*RGCHGF Trigger: AAAGCCATGACAGCCACGCAAGTCAGGAAGGTGTAG...CAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | GCTTGGCCAGCAGGGCCAGAGAAGCCACCATTGTTTGAACTCCTAATCTCGAGCTGTTCCAGTGGGTCTTaGAGTTGCGGTATAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AWPAGPEKPPLFELLISSCSSGS*SCGIRT Trigger: CGTCCTTATACCGCAACTCAAAGACCCACTGGAACA...GCTCGAGATTAGGAGTTCAAACAATGGTGGCTTCTCTGGCCCTGCTGGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CACTCAGGGCTGTGCTGGGGTGGTGACAACATGGTGATGACACTGTCACCGACTATATCAAGCCGTGTATaGTCTTGTTCCAGTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSGLCWGGDNMVMTLSPTISSRV*SCSSGS Trigger: AGACCCACTGGAACAAGACAATACACGGCTTGATAT...AGTCGGTGACAGTGTCATCACCATGTTGTCACCACCCCAGCACAGCCCTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS GCA 90 bp | TTTCAGCATCTGCACATCTTCAAACTGAGGCCCATCTGTCTCCATTaGGACCGGAATGCTCACGGCGCTGGCTTGACTATACACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FQHLHIFKLRPICLH*DRNAHGAGLTIHCI Trigger: TATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTGAAGATGTGCAGATGCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | AATCTCGAGCTGAGGCGGACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGGGCTGGAAACACATTaGGCTAACTGTCGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLELRRTCIIAYRTGSEEGLETH*ANCRKR Trigger: TCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCCC...TTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGTCCGCCTCAGCTCGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | TACGAGAAGGTGACAGTCAGGGTGCTTTCCTACAGCTCTGACTTTGGATCTCACATATCAAGCCGTGTATaGTCTTGTTCCAGTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YEKVTVRVLSYSSDFGSHISSRV*SCSSGS Trigger: AGACCCACTGGAACAAGACAATACACGGCTTGATAT...GTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | TACGAGAAGGTGACAGTCAGGGTGCTTTCCTACAGCTCTGACTTTGGATCTCACGTCATCGAAGAGTTTTaGGTTCATCTCCATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YEKVTVRVLSYSSDFGSHVIEEF*VHLHEE Trigger: CTCTTCATGGAGATGAACCAAAAACTCTTCGATGAC...GTGAGATCCAAAGTCAGAGCTGTAGGAAAGCACCCTGACTGTCACCTTCTCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | ACGTGCATTATTGCCTACAGAACGGGGTCAGAGGAAGCTTTGACATTGAGTGTAATATCAAGCCGTGTATaGTCTTGTTCCAGTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TCIIAYRTGSEEALTLSVISSRV*SCSSGS Trigger: AGACCCACTGGAACAAGACAATACACGGCTTGATAT...TACACTCAATGTCAAAGCTTCCTCTGACCCCGTTCTGTAGGCAATAATGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CTGGTACAGAATCAACAGTGTCTTAACAACATACAAGCTGAACAATTAGCATGGGGGCTGGAAACACATTaGGCTAACTGTCGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVQNQQCLNNIQAEQLAWGLETH*ANCRKR Trigger: TCTTTTCCGACAGTTAGCCAAATGTGTTTCCAGCCC...CCATGCTAATTGTTCAGCTTGTATGTTGTTAAGACACTGTTGATTCTGTACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109832.3 |
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| CDS-3UTR CAA 90 bp | GAAGCTTTGACATTGAGTGTAACTGACTGGTATGGCACACACAGTATGTCTTTTGTCATCGAAGAGTTTTaGGTTCATCTCCATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EALTLSVTDWYGTHSMSFVIEEF*VHLHEE Trigger: CTCTTCATGGAGATGAACCAAAAACTCTTCGATGAC...AAAAGACATACTGTGTGTGCCATACCAGTCAGTTACACTCAATGTCAAAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 |
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| CDS-3UTR CAA 90 bp | CGTGTGGCAAATAAGTACTTATACAAGAGGAAGTTACAAAGTTGGAAAGTGTTTATATCAAGCCGTGTATaGTCTTGTTCCAGTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVANKYLYKRKLQSWKVFISSRV*SCSSGS Trigger: AGACCCACTGGAACAAGACAATACACGGCTTGATAT...AAACACTTTCCAACTTTGTAACTTCCTCTTGTATAAGTACTTATTTGCCACACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS-3UTR CAA 90 bp | CATTACAATCTTAGAGGTTACATCCTGGTGTTCTCTTTACCACATCACATCTTAGTCATCGAAGAGTTTTaGGTTCATCTCCATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HYNLRGYILVFSLPHHILVIEEF*VHLHEE Trigger: CTCTTCATGGAGATGAACCAAAAACTCTTCGATGAC...TAAGATGTGATGTGGTAAAGAGAACACCAGGATGTAACCTCTAAGATTGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221715.2 |
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| CDS CCA 72 bp | GGAGGAACATCTCGAATGTGGAGAAGGGCCACGGGCTaGAAAGGCCCGTTGGAGCTGGCCGCATCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: GGTSRMWRRATG*KGPLELAASTT Trigger: GGTGGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 ENSMUST00000221715.2 |
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| CDS CAA 90 bp | GGAACATCTCGAATGTGGAGAAGGGCCACGGGCTGGAAAGGCCCGTaGGAGCTGGCCGCATCCACCACCATCCCGCTGCCCGCTTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: GTSRMWRRATGWKGP*ELAASTTIPLPALL Trigger: TAATAAAGCGGGCAGCGGGATGGTGGTGGATGCGGCCAGCTCCAACGGGCCTTTCCAGCCCGTGGCCCTTCTCCACATTCGAGATGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084985.11 ENSMUST00000109832.3 ENSMUST00000221074.2 ENSMUST00000221715.2 |
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| CDS TCA 72 bp | GTCTCCATTGCGACCGGAATGCTCACGGCGCTGGCTTaGCTATACACTGCATACTGGGGATTCGCTTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSIATGMLTALA*LYTAYWGFALA Trigger: AGCCAAAGCGAATCCCCAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS GCA 72 bp | CAAACTGAGGCCCATCTGTCTCCATTGCGACCGGAATaGTCACGGCGCTGGCTTGACTATACACTGCATACT | + |
|
Preference number: 6 (lower is better) Translates to: QTEAHLSPLRPE*SRRWLDYTLHT Trigger: AGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS GCA 72 bp | CTGCACATCTTCAAACTGAGGCCCATCTGTCTCCATTaGGACCGGAATGCTCACGGCGCTGGCTTGACTATA | + |
|
Preference number: 6 (lower is better) Translates to: LHIFKLRPICLH*DRNAHGAGLTI Trigger: TATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTGAAGATGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS CCA 72 bp | CATCTGTCTCCATTGCGACCGGAATGCTCACGGCGCTaGCTTGACTATACACTGCATACTGGGGATTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLSPLRPECSRR*LDYTLHTGDSL Trigger: AAGCGAATCCCCAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS CAA 72 bp | TCTGCACATCTTCAAACTGAGGCCCATCTGTCTCCATaGCGACCGGAATGCTCACGGCGCTGGCTTGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: SAHLQTEAHLSP*RPECSRRWLDY Trigger: ATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTGAAGATGTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS CAA 90 bp | TTTTCAGCATCTGCACATCTTCAAACTGAGGCCCATCTGTCTCCATaGCGACCGGAATGCTCACGGCGCTGGCTTGACTATACACTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSASAHLQTEAHLSP*RPECSRRWLDYTLH Trigger: ATGCAGTGTATAGTCAAGCCAGCGCCGTGAGCATTCCGGTCGCAATGGAGACAGATGGGCCTCAGTTTGAAGATGTGCAGATGCTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084985.11 ENSMUST00000221074.2 |
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| CDS CAA 72 bp | TCTTTTAAAGATGGGAGTTTTTGTAGCTCTCTATTATaGCTGGCATTAAACCGTGAAGAATTCTGCCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFKDGSFCSSLL*LALNREEFCRL Trigger: CAAACGGCAGAATTCTTCACGGTTTAATGCCAGCAATAATAGAGAGCTACAAAAACTCCCATCTTTAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220509.2 |
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