Pregenerated sensors for PPP2R5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024777Ensembl transcript IDs: ENSMUST00000025695.10
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGGAGGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTaGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: QGRIPDGSFPVAYLP*SSLARILPQRPESS Trigger: AGAACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR GCA 90 bp | GCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTaGCACAAAGGCCTGAGAGTTCTGCTGCCAAGACTACCATCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: ASQLHTCPGLVLPES*HKGLRVLLPRLPSC Trigger: GCAAGATGGTAGTCTTGGCAGCAGAACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATCTGCCGCCTGGAGCCTaGCTGTGTAGGGCAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSLFIKSAPSQVKGADHDLPPGA*LCRAGE Trigger: CTCCCCTGCCCTACACAGCCAGGCTCCAGGCGGCAG...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR CAA 90 bp | GTAGGGCAGGGGAGGATCCCTGATGGCAGCTTCCCAGTTGCATACTaGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VGQGRIPDGSFPVAY*PWSSLARILPQRPE Trigger: CTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCCTCCCCTGCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR CAA 90 bp | TCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTaGCCAGAATCTTGCCACAAAGGCCTGAGAGTTCTGCTGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLMAASQLHTCPGLV*PESCHKGLRVLLPR Trigger: TCTTGGCAGCAGAACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATTCCCAGTTGCATACTTaGCCTGGTCTAGTCTTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VSLFIKSAPSQVKGADHDSQLHT*PGLVLP Trigger: TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGA...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATTACTGTCCAAGACTACCATCTTaGCTTCTTGTTTCCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFIKSAPSQVKGADHDYCPRLPS*LLVSPS Trigger: GGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGG...ACAGTAATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATAGAATAAATAGACTGTaGCCCCATGGTGGGGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSLFIKSAPSQVKGADHDRINRL*PHGGDE Trigger: CTCATCCCCACCATGGGGGCACAGTCTATTTATTCT...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR GCA 72 bp | GGAGGATCCCTGATGGCAGCTTCCCAGTTGCATACTTaGCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGSLMAASQLHT*PGLVLPESCHK Trigger: TTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR CCA 72 bp | ATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTaGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IPDGSFPVAYLP*SSLARILPQRP Trigger: AGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGCCACTCCGGCAAGGCCACGGGGAGGCGTGGGCCTCACTGGGCCCCTGGGAGACCCAGGAACTTaGCGTACACCCGATGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRATPARPRGGVGLTGPLGDPGT*RTPDAR Trigger: TCTTGCATCGGGTGTACGGCAAGTTCCTGGGTCTCC...CAGGGGCCCAGTGAGGCCCACGCCTCCCCGTGGCCTTGCCGGAGTGGCTCTAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCACTCCGGCAAGGCCACGGGGAGGCGTGGGCCTCACTGGGCCCCTGAACATCACCCCACATTaGGCCAGTTTCCGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRATPARPRGGVGLTGPLNITPH*ASFRLS Trigger: GCTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTT...CAGGGGCCCAGTGAGGCCCACGCCTCCCCGTGGCCTTGCCGGAGTGGCTCTAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCACTCCGGCAAGGCCACGGGGAGGCGTGGGCCTCACTGGGCCCCTGACGAGGGCTCAAGGTTaGGCTCATCTTCTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRATPARPRGGVGLTGPLTRAQG*AHLLQG Trigger: ACCCTGAAGAAGATGAGCCCAACCTTGAGCCCTCGT...CAGGGGCCCAGTGAGGCCCACGCCTCCCCGTGGCCTTGCCGGAGTGGCTCTAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCACTCCGGCAAGGCCACGGGGAGGCGTGGGCCTCACTGGGCCCCTGAACCGGAGGAAGATGTaGTTGCACTGTTTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PRATPARPRGGVGLTGPLNRRKM*LHCLRM Trigger: CATCCGCAAACAGTGCAACCACATCTTCCTCCGGTT...CAGGGGCCCAGTGAGGCCCACGCCTCCCCGTGGCCTTGCCGGAGTGGCTCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGGCTTCCTTGGCCCCTTaGGTCCCCTGTAGCCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLASLAP*VPCSRR Trigger: ACGCCGGCTACAGGGGACCCAAGGGGCCAAGGAAGC...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCACCCTGCGGAGGGACCTaGGGGAGAAGCCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPPCGGT*GRSHPP Trigger: AGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGG...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTACTGAGAAGAGCTGTGTaGGCGACGGGGCCGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVLRRAV*ATGPGP Trigger: AGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTCAG...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAGTCTGGTGGTGGCACTaGAGACAGCCCTGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPVWWWH*RQPWGG Trigger: TCCTCCCCAGGGCTGTCTCCAGTGCCACCACCAGAC...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGGCCCGCTCTGCAACCTaGAAATGGGGGCTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLARSAT*KWGLET Trigger: TGTCTCCAGCCCCCATTTCCAGGTTGCAGAGCGGGC...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCATCACCTCCTTCCCCTTaGGGTCAGCCACGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPSPPSP*GQPRSP Trigger: TGGACTGCGTGGCTGACCTCAAGGGGAAGGAGGTGA...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATGGTAGACGGGCTCGATaGGCACACCCCGGGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDGRRAR*AHPGCN Trigger: GTTGCACCCGGGGTGTGCTCATCGAGCCCGTCTACC...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACACAGCGAGCCACCTaGTTGAAGAGGGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPTQRAT*LKRGSW Trigger: CCAGGAGCCCCTCTTCAAGCAGGTGGCTCGCTGTGT...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAATCCACCTTGTCTGGTaGTGGCACTGGAGACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPIHLVW*WHWRQP Trigger: GGGCTGTCTCCAGTGCCACCACCAGACAAGGTGGAT...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAGCCATCCACCTTGTCTaGTGGTGGCACTGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPAIHLV*WWHWRQ Trigger: CTGTCTCCAGTGCCACCACCAGACAAGGTGGATGGC...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTACACCTTGTCTGGTGGTaGCACTGGAGACAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVHLVWW*HWRQPW Trigger: CCAGGGCTGTCTCCAGTGCCACCACCAGACAAGGTG...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTGCAGGGGCAGTGGAGTaGGCTCTTGCTGGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVAGAVE*ALAGCS Trigger: AGAGCAACCAGCAAGAGCTCACTCCACTGCCCCTGC...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAAGGGACACGATGGTTTaGTTCCAGTGCTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPRDTMV*FQCSLD Trigger: GTCCAAGGAGCACTGGAATCAAACCATCGTGTCCCT...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGAGTGACTTGACAGAGTaGAAGGGGATCAGGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLSDLTE*KGIRTR Trigger: TCGAGTCCTGATCCCCTTGCACTCTGTCAAGTCACT...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCCGCTCCTGGGCCTTCTaGTGCTCCTGTTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPRSWAF*CSCCFS Trigger: GGAAAAACAACAGGAGCAGCAGAAGGCCCAGGAGCG...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACAGGGTTCTCGCTGGGTaGCAGGGTCCGGAAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: AKTTILPSCFPLRESCSHRVLAG*QGPEDI Trigger: AATATCTTCCGGACCCTGCCACCCAGCGAGAACCCT...GTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTACTCAGGGTTCTCGCTaGGTGGCAGGGTCCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVTQGSR*VAGSGR Trigger: TCTTCCGGACCCTGCCACCCAGCGAGAACCCTGAGT...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGAGAGGGCTGGAAATCTaGACTCTCCAAGAAACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLRGLEI*TLQETQ Trigger: CTGCGTTTCTTGGAGAGTCCAGATTTCCAGCCCTCT...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAGATTCCAGTGCTCCTTaGACACTTGGTAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLMAASQLHTCPGLVLPDSSAP*TLGRGS Trigger: GGACCCTCTACCAAGTGTCCAAGGAGCACTGGAATC...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTACGGCTCAGCAACTCATaGAACTCAGAGGCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVRLSNS*NSEAGT Trigger: TGTGCCAGCCTCTGAGTTGCATGAGTTGCTGAGCCG...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATTGTGGTTGCACTGTTTaGGGATGTAGGCCCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDCGCTV*GCRPGD Trigger: GTCTCCGGGCCTACATCCGCAAACAGTGCAACCACA...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATATACAGAGCCCGCTCTaGAACCTGGAAATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDIQSPL*NLEMGA Trigger: AGCCCCCATTTCCAGGTTGCAGAGCGGGCTCTGTAT...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTATACCAGCTGCAGATGTaGCCACGAGGGCTCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVYQLQM*PRGLKV Trigger: AACCTTGAGCCCTCGTGGCCACATCTGCAGCTGGTA...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| 3UTR CAA 72 bp | CAAAGGCCTGAGAGTTCTGCTGCCAAGACTACCATCTaGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPESSAAKTTI*PSCFPLRESCS Trigger: GGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAGCAGAACTCTCAGGCCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTACTGATATCATGCGGATaGTGTCTGGGTAGACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVLISCG*CLGRRA Trigger: AGCCCGTCTACCCAGACATCATCCGCATGATATCAG...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATGTTCCAGCTCGTAGATaGACCGGAGGAAGATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDVPARR*TGGRCG Trigger: ACCACATCTTCCTCCGGTTCATCTACGAGCTGGAAC...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGACAGTTCATTGAGGGCTaGACGCTTCACCTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRQFIEG*TLHLLP Trigger: GGGAAGGAGGTGAAGCGTGCAGCCCTCAATGAACTG...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCTTGCCGTACACCCGATaGAAGATGGTCTTGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPLPYTR*KMVLRY Trigger: GTACCTCAAGACCATCTTGCATCGGGTGTACGGCAA...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCGGAGGAAGATGTGGTTaGACTGTTTGCGGATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPGGRCG*TVCGCR Trigger: CCTACATCCGCAAACAGTGCAACCACATCTTCCTCC...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTACCAGGAACTGCTTGTaGTCAGTCTTCAGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVTRNCL*SVFRGS Trigger: GCTGCCCCTGAAGACTGAGCACAAGCAGTTCCTGGT...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGACATGCGGATGATGTCTaGGTAGACGGGCTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRHADDV*VDGLDE Trigger: CTCATCGAGCCCGTCTACCCAGACATCATCCGCATG...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGAGCAGGCAGCACAGTGTaGCAGTTGTCCTCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRAGSTV*QLSSMR Trigger: CCTCATTGAGGACAACTGCCACACTGTGCTGCCTGC...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTAACTGGGAGGGCTCGATaGCATCAAGAATCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVTGRAR*HQESLP Trigger: TGGAAGAGATTCTTGATGTCATCGAGCCCTCCCAGT...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTAACTCATATACCAGCTaGAGATGTGGCCACGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVNSYTS*RCGHEG Trigger: GCCCTCGTGGCCACATCTGCAGCTGGTATATGAGTT...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATACTCGAACCAGGAACTaGTTGTGCTCAGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDTRTRN*LCSVFR Trigger: CCTGAAGACTGAGCACAAGCAGTTCCTGGTTCGAGT...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCCTGCACCACACAGTATaGCAGCTGAGCATGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPLHHTV*QLSMKN Trigger: GTTTTTCATGCTCAGCTGGCATACTGTGTGGTGCAG...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR GCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGATCCTGGGCCTTCTGCTaGTCCTGTTGTTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRSWAFC*SCCFSS Trigger: GCTGGAAAAACAACAGGAGCAGCAGAAGGCCCAGGA...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTTTGGCCACAGAGGGCTaGAAATCTGGACTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVLATEG*KSGLSK Trigger: CTTGGAGAGTCCAGATTTCCAGCCCTCTGTGGCCAA...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATGATCCACGTATCTCTTaGCCACAGAGGGCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFIKSAPSQVKGADHDDPRIS*PQRAGN Trigger: ATTTCCAGCCCTCTGTGGCCAAGAGATACGTGGATC...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTAAACATCACCTCCTTCTaGGTGCAGGTTTTAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGMEGLIALGLASPVLGVNITSF*VQVLGQ Trigger: CTGGCCTAAAACCTGCACCCAGAAGGAGGTGATGTT...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGAGGCAGTTGTCCTCAATaGGGCTCAGGATGTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRGSCPQ*GSGCTH Trigger: ATGAGTACATCCTGAGCCTCATTGAGGACAACTGCC...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGATTGAAGAGGGGCTCCTaGATCTTCACAAACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRLKRGS*IFTNWE Trigger: CTCCCAGTTTGTGAAGATCCAGGAGCCCCTCTTCAA...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CCA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTTGGATCTTCACAAACTaGGAGGGCTCGATGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HTCPGLVLPESCHKGLRVWIFTN*EGSMTS Trigger: TGATGTCATCGAGCCCTCCCAGTTTGTGAAGATCCA...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR TCA 90 bp | GAGAATGTCCCTGGACAAGGTCTTGTTGGGGGTGAGCTGGGCAGAATAAATAGAATTAGGACAAACTTTTaGTCCACGTATCTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPGQGLVGGELGRINRIRTNF*STYLLA Trigger: GGCCAAGAGATACGTGGATCAAAAGTTTGTCCTAAT...TCTATTTATTCTGCCCAGCTCACCCCCAACAAGACCTTGTCCAGGGACATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS GCA 90 bp | GAGAAGAGCTGTGTGAGCGACGGGGCCGGGCCCTGCGGAGGGACCTaGGGGAGAAGCCATCCACCTTGTCTGGTGGTGGCACTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EKSCVSDGAGPCGGT*GRSHPPCLVVALET Trigger: TGTCTCCAGTGCCACCACCAGACAAGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS TCA 90 bp | GAGCTCTTGCTGGTTGCTCTGATAGCGGAACTGAGAAGAGCTGTGTaGGCGACGGGGCCGGGCCCTGCGGAGGGACCTGCGGGAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLLVALIAELRRAV*ATGPGPAEGPAGEA Trigger: GGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTCAGTTCCGCTATCAGAGCAACCAGCAAGAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS GCA 90 bp | GATAGCGGAACTGAGAAGAGCTGTGTGAGCGACGGGGCCGGGCCCTaGGGAGGGACCTGCGGGAGAAGCCATCCACCTTGTCTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSGTEKSCVSDGAGP*GGTCGRSHPPCLVV Trigger: CACCACCAGACAAGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTCAGTTCCGCTATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCCAGCGAGCCACCTGCTaGAAGAGGGGCTCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPQRATC*KRGSWI Trigger: GATCCAGGAGCCCCTCTTCAAGCAGGTGGCTCGCTG...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGAAACATCACCCCACATaGGGCCAGTTTCCGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLKHHPT*GQFPAQ Trigger: CTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTTT...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGACTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCTTCACCTCCTTCCCCTaGAGGTCAGCCACGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPRLPSCLLVSPSVKAVPFTSFP*RSATQS Trigger: GGACTGCGTGGCTGACCTCAAGGGGAAGGAGGTGAA...GGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAGTCTTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCACACGAGGGCTCAAGGTaGGGCTCATCTTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLMAASQLHTCPGLVLPHEGSR*GSSSSG Trigger: CCCTGAAGAAGATGAGCCCAACCTTGAGCCCTCGTG...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGCGATGCAAGATGGTCTaGAGGTACTCACGTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLRCKMV*RYSRSR Trigger: CCGGGAACGTGAGTACCTCAAGACCATCTTGCATCG...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CCA 90 bp | TTGAGGTCAGCCACGCAGTCCAAGAAGTCAAACATCACCCCACATTaGGCCAGTTTCCGGCTCAGCAACTCATGCAACTCAGAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSATQSKKSNITPH*ASFRLSNSCNSEAG Trigger: GCCAGCCTCTGAGTTGCATGAGTTGCTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTTTGACTTCTTGGACTGCGTGGCTGACCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTAGAGGCTGGCACATCTTaGAGCAGGGGCAGTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGMEGLIALGLASPVLGVEAGTS*SRGSGV Trigger: CACTCCACTGCCCCTGCTCAAAGATGTGCCAGCCTC...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATCGGAGACCCAGGAACTaGCCGTACACCCGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSLFIKSAPSQVKGADHDRRPRN*PYTRCK Trigger: CTTGCATCGGGTGTACGGCAAGTTCCTGGGTCTCCG...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAAGCACAGTGTGGCAGTaGTCCTCAATGAGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLMAASQLHTCPGLVLPSTVWQ*SSMRLR Trigger: CCTGAGCCTCATTGAGGACAACTGCCACACTGTGCT...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GTTTCGCTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATGAGAAGCCATCCACCTaGTCTGGTGGTGGCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSLFIKSAPSQVKGADHDEKPST*SGGGTG Trigger: TCCAGTGCCACCACCAGACAAGGTGGATGGCTTCTC...ATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAGCGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTACCATCTTGCCTTCTTGTTTCCCCCTCCGTGAAAGCTGTTCCCACGGGGCTGGGCAGCGCAAAGCCATaGATGATGCTTCCTAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPSCLLVSPSVKAVPTGLGSAKP*MMLPKI Trigger: GATCTTAGGAAGCATCATCAATGGCTTTGCGCTGCC...CAGCCCCGTGGGAACAGCTTTCACGGAGGGGGAAACAAGAAGGCAAGATGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CATACTTGCCCTGGTCTAGTCTTGCCAGAATCTTGCCACAAAGGCCTGAGAGTTCAGTGGAGTGAGCTCTaGCTGGTTGCTCTGATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HTCPGLVLPESCHKGLRVQWSEL*LVALIA Trigger: CGCTATCAGAGCAACCAGCAAGAGCTCACTCCACTG...AACTCTCAGGCCTTTGTGGCAAGATTCTGGCAAGACTAGACCAGGGCAAGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCAGTTTTAGGCCAGTATTaGAGAAGCCCCCGGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: GSLMAASQLHTCPGLVLPVLGQY*RSPRIT Trigger: TGTTATCCGGGGGCTTCTCAAATACTGGCCTAAAAC...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | GGATCCCTGATGGCAGCTTCCCAGTTGCATACTTGCCCTGGTCTAGTCTTGCCACTTCTGCTGCTCCTGTaGTTTTTCCAGCTTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLMAASQLHTCPGLVLPLLLLL*FFQLVG Trigger: TCCTACAAGCTGGAAAAACAACAGGAGCAGCAGAAG...TGGCAAGACTAGACCAGGGCAAGTATGCAACTGGGAAGCTGCCATCAGGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | CTCTTTATTAAATCTGCCCCCAGCCAGGTGAAGGGGGCAGACCATGATTACTGTGTGCTCCTTGGACACTaGGTAGAGGGTCCCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LFIKSAPSQVKGADHDYCVLLGH*VEGPKY Trigger: GTATTTGGGACCCTCTACCAAGTGTCCAAGGAGCAC...ACAGTAATCATGGTCTGCCCCCTTCACCTGGCTGGGGGCAGATTTAATAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATGGAGGGGCTGATAGCTCTGGGTTTAGCATCTCCTGTTCTAGGTGTAAAAACAGATAGTGACTaGACAGAGTGCAAGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGMEGLIALGLASPVLGVKTDSD*TECKGI Trigger: GATCCCCTTGCACTCTGTCAAGTCACTATCTGTTTT...TACACCTAGAACAGGAGATGCTAAACCCAGAGCTATCAGCCCCTCCATCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS GCA 72 bp | TGTGTGAGCGACGGGGCCGGGCCCTGCGGAGGGACCTaGGGGAGAAGCCATCCACCTTGTCTGGTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CVSDGAGPCGGT*GRSHPPCLVVA Trigger: TGCCACCACCAGACAAGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS TCA 72 bp | CTGGTTGCTCTGATAGCGGAACTGAGAAGAGCTGTGTaGGCGACGGGGCCGGGCCCTGCGGAGGGACCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVALIAELRRAV*ATGPGPAEGPA Trigger: CGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTCAGTTCCGCTATCAGAGCAACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS GCA 72 bp | ACTGAGAAGAGCTGTGTGAGCGACGGGGCCGGGCCCTaGGGAGGGACCTGCGGGAGAAGCCATCCACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TEKSCVSDGAGP*GGTCGRSHPPC Trigger: ACAAGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTCTTCTCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CCA 72 bp | GAGGGACCTGCGGGAGAAGCCATCCACCTTGTCTGGTaGTGGCACTGGAGACAGCCCTGGGGAGGAGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGPAGEAIHLVW*WHWRQPWGGGA Trigger: AGCCCCTCCTCCCCAGGGCTGTCTCCAGTGCCACCACCAGACAAGGTGGATGGCTTCTCCCGCAGGTCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 72 bp | CCCAGGAACTTGCCGTACACCCGATGCAAGATGGTCTaGAGGTACTCACGTTCCCGGGGGTCCTCGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRNLPYTRCKMV*RYSRSRGSSLS Trigger: TGACAGCGAGGACCCCCGGGAACGTGAGTACCTCAAGACCATCTTGCATCGGGTGTACGGCAAGTTCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS TCA 72 bp | CCAGGAACTTGCCGTACACCCGATGCAAGATGGTCTTaGGGTACTCACGTTCCCGGGGGTCCTCGCTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGTCRTPDARWS*GTHVPGGPRCQ Trigger: TTGACAGCGAGGACCCCCGGGAACGTGAGTACCTCAAGACCATCTTGCATCGGGTGTACGGCAAGTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS GCA 72 bp | ACAGAGTGCAAGGGGATCAGGACTCGAACCAGGAACTaGTTGTGCTCAGTCTTCAGGGGCAGCGCAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TECKGIRTRTRN*LCSVFRGSAKP Trigger: TGGCTTTGCGCTGCCCCTGAAGACTGAGCACAAGCAGTTCCTGGTTCGAGTCCTGATCCCCTTGCACTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 90 bp | CTTGAGGTCAGCCACGCAGTCCAAGAAGTCAAACATCACCCCACATaGGGCCAGTTTCCGGCTCAGCAACTCATGCAACTCAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LEVSHAVQEVKHHPT*GQFPAQQLMQLRGW Trigger: CCAGCCTCTGAGTTGCATGAGTTGCTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTTTGACTTCTTGGACTGCGTGGCTGACCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 72 bp | AGCCACGCAGTCCAAGAAGTCAAACATCACCCCACATaGGGCCAGTTTCCGGCTCAGCAACTCATGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: SHAVQEVKHHPT*GQFPAQQLMQL Trigger: GAGTTGCATGAGTTGCTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTTTGACTTCTTGGACTGCGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 72 bp | GGACACGATGGTTTGATTCCAGTGCTCCTTGGACACTaGGTAGAGGGTCCCAAATACCGCAGGCAGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GHDGLIPVLLGH*VEGPKYRRQHS Trigger: ACTGTGCTGCCTGCGGTATTTGGGACCCTCTACCAAGTGTCCAAGGAGCACTGGAATCAAACCATCGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 90 bp | GTAGATCAGGGACACGATGGTTTGATTCCAGTGCTCCTTGGACACTaGGTAGAGGGTCCCAAATACCGCAGGCAGCACAGTGTGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VDQGHDGLIPVLLGH*VEGPKYRRQHSVAV Trigger: AACTGCCACACTGTGCTGCCTGCGGTATTTGGGACCCTCTACCAAGTGTCCAAGGAGCACTGGAATCAAACCATCGTGTCCCTGATCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CCA 72 bp | AGATCAGGGACACGATGGTTTGATTCCAGTGCTCCTTaGACACTTGGTAGAGGGTCCCAAATACCGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGTRWFDSSAP*TLGRGSQIPQA Trigger: TGCCTGCGGTATTTGGGACCCTCTACCAAGTGTCCAAGGAGCACTGGAATCAAACCATCGTGTCCCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS CAA 72 bp | TGCTTGTGCTCAGTCTTCAGGGGCAGCGCAAAGCCATaGATGATGCTTCCTAAGATCTCTAAGAGCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLCSVFRGSAKP*MMLPKISKSSA Trigger: GGCTGAGCTCTTAGAGATCTTAGGAAGCATCATCAATGGCTTTGCGCTGCCCCTGAAGACTGAGCACAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||
| CDS TCA 72 bp | CTGTCAAATAGCTCCAGGAGCATTAGGACAAACTTTTaGTCCACGTATCTCTTGGCCACAGAGGGCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSNSSRSIRTNF*STYLLATEGWK Trigger: TTTCCAGCCCTCTGTGGCCAAGAGATACGTGGATCAAAAGTTTGTCCTAATGCTCCTGGAGCTATTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025695.10 |
||