Pregenerated sensors for PPP2R5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026626Ensembl transcript IDs: ENSMUST00000067976.9
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTTGGAGGAGAGGAATGAAGGAGGTGAGCCTCGGGTCCACCCGTaGCCTGTGCTGCTCCGCACACGCTCCGGGGAGCCGCTGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: ALEERNEGGEPRVHP*PVLLRTRSGEPLLK Trigger: CTTCAGCAGCGGCTCCCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCCTTCATTCCTCTCCTCCAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGTTTCGCTTTTACGCTTaGCAGGAAAAACTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HTSLGEVREGQPLRLSYEFRFYA*QEKLAS Trigger: GGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAA...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| 3UTR-3UTR CCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGCTTGCCAGGAAAAACTaGCCTCCTAATTATATTATA | + |
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Preference number: 2 (lower is better) Translates to: HTSLGEVREGQPLRLSYELARKN*PPNYII Trigger: TATAATATAATTAGGAGGCCAGTTTTTCCTGGCAAG...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGAAATATACTGTGGCCGTaGTACAGCACAGGGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRNILWP*YSTGLC Trigger: ACATAGCCCTGTGCTGTATCACGGCCACAGTATATT...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| 3UTR CCA 72 bp | GAGAGGAATGAAGGAGGTGAGCCTCGGGTCCACCCGTaGCCTGTGCTGCTCCGCACACGCTCCGGGGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: ERNEGGEPRVHP*PVLLRTRSGEP Trigger: CGGCTCCCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCCTTCATTCCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| 3UTR CCA 72 bp | CATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTaGCCTCCTAATTATATTATACTGATGAGGTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: HNSFAFTLARKN*PPNYIILMRSA Trigger: AGCAGACCTCATCAGTATAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGAGGTGAGCCTCGGGTCCACCCGTGGCCTGTGCTGCTCCGCACACGCTCCGGGTACGCCAGCTGTGCGTaGAACAAGGCCAATCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GGEPRVHPWPVLLRTRSGYASCA*NKANPF Trigger: AAAAGGATTGGCCTTGTTTCACGCACAGCTGGCGTA...CCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGCCTGGCTGCCCTGGCTaGGGAACTGCGACGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HTSLGEVREGQPLRLSYEPGCPG*GTATSP Trigger: AGGGCTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGG...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGAGGTGAGCCTCGGGTCCACCCGTGGCCTGTGCTGCTCCGCACACGCTCCGGGACAAGCTGGCAAACATaGTTGGCAGGATTTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: GGEPRVHPWPVLLRTRSGTSWQT*LAGFYQ Trigger: TTGATAAAATCCTGCCAATCATGTTTGCCAGCTTGT...CCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGGCACCGATTTCCGGGTaGAGCCGTCCACTTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HTSLGEVREGQPLRLSYEAPISG*SRPLSP Trigger: CGGAGAAAGTGGACGGCTTCACCCGGAAATCGGTGC...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | GGAGGTGAGCCTCGGGTCCACCCGTGGCCTGTGCTGCTCCGCACACGCTCCGGGATTAGAAACTGCTTATaGTCTGCTTTCAGTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GGEPRVHPWPVLLRTRSGIRNCL*SAFSGN Trigger: ATTGCCACTGAAAGCAGAGCATAAGCAGTTTCTAAT...CCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | CCACGATCACCTCACTCAACAGAGACAGTGACACAATCCATGATTAGACAGAGTAGCTGGGGCAGGGGGTaGAGCTCCGCCTGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRSPHSTETVTQSMIRQSSWGRG*SSAWLP Trigger: GGGCAGCCAGGCGGAGCTGCACCCCCTGCCCCAGCT...ACTCTGTCTAATCATGGATTGTGTCACTGTCTCTGTTGAGTGAGGTGATCGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | CCACGATCACCTCACTCAACAGAGACAGTGACACAATCCATGATTAGACAGAGTGGGTGCAGCTCCGCCTaGCTGCCCTGGCTGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PRSPHSTETVTQSMIRQSGCSSA*LPWLRN Trigger: GTTCCGCAGCCAGGGCAGCCAGGCGGAGCTGCACCC...ACTCTGTCTAATCATGGATTGTGTCACTGTCTCTGTTGAGTGAGGTGATCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGTTTGCAATGCTGGGCTaGAAATCAGGACTCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HTSLGEVREGQPLRLSYEFAMLG*KSGLSK Trigger: CTTGGAGAGTCCTGATTTCCAGCCCAGCATTGCAAA...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGCCTGGAAATGAGAGCTaGAGACGCACTTGGATATCT | + |
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Preference number: 4 (lower is better) Translates to: HTSLGEVREGQPLRLSYEPGNES*RRTWIS Trigger: AGATATCCAAGTGCGTCTCCAGCTCTCATTTCCAGG...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCTCTCCGAGGCCGAGATaGCGGCGCAGGCAACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFSPRPR*RRRQLV Trigger: CACCAGTTGCCTGCGCCGCCATCTCGGCCTCGGAGA...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGTATGGCAGTGTCTTTAATGAGGCTGGGCTCTTGTCCCCTGCCCACACCTGCTTTCAGTGGCAATaGAAAGCCATTGATGATACT | + |
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Preference number: 4 (lower is better) Translates to: PEYGSVFNEAGLLSPAHTCFQWQ*KAIDDT Trigger: AGTATCATCAATGGCTTTGCATTGCCACTGAAAGCA...GGTGTGGGCAGGGGACAAGAGCCCAGCCTCATTAAAGACACTGCCATACTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGAGCGCTTCTGCCTCTaGGCCTTGCGCACCGATTTC | + |
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Preference number: 4 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFERFCL*ALRTDF Trigger: GAAATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCTC...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTATCCGCCTGGCTGCCCTaGCTGCGGAACTGCGACGAG | + |
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Preference number: 4 (lower is better) Translates to: IILSLLRLPGKTGLLIILSAWLP*LRNCDE Trigger: CTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGGCGGA...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTAAACTGCGACGAGCCCTaGGAGCGCTTCTGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IILSLLRLPGKTGLLIILNCDEP*ERFCLC Trigger: GCAGAGGCAGAAGCGCTCTCAGGGCTCGTCGCAGTT...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGATTGAAGTGGCATCTTTaGGCTGGGGCAGGGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRLKWHL*AGAGGA Trigger: TGCACCCCCTGCCCCAGCTCAAAGATGCCACTTCAA...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | CCACGATCACCTCACTCAACAGAGACAGTGACACAATCCATGATTAGACAGAGTCTCTTGCTGTTCATTTaGAGTGGCATCTTTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSPHSTETVTQSMIRQSLLLFI*SGIFEL Trigger: CAGCTCAAAGATGCCACTTCAAATGAACAGCAAGAG...ACTCTGTCTAATCATGGATTGTGTCACTGTCTCTGTTGAGTGAGGTGATCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | CCACGATCACCTCACTCAACAGAGACAGTGACACAATCCATGATTAGACAGAGTCTGAGACAGAGTCCATaGAATCAAACAGTACACAGC | + |
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Preference number: 4 (lower is better) Translates to: PRSPHSTETVTQSMIRQSLRQSP*NQTVHS Trigger: GCTGTGTACTGTTTGATTTCATGGACTCTGTCTCAG...ACTCTGTCTAATCATGGATTGTGTCACTGTCTCTGTTGAGTGAGGTGATCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGAAATGTCAGATGTTGTAAAACCCAGAGTATGGCAGTGTCTTTAATGAGGCTGTACACCAACTGTATGTaGGGCCAAGAGGCCTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GNVRCCKTQSMAVSLMRLYTNCM*GQEASS Trigger: ACTTGAGGCCTCTTGGCCTCACATACAGTTGGTGTA...CAGCCTCATTAAAGACACTGCCATACTCTGGGTTTTACAACATCTGACATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | GGAAATGTCAGATGTTGTAAAACCCAGAGTATGGCAGTGTCTTTAATGAGGCTGATTTGGCACTGGTACTaGTGCGAATACTGTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: GNVRCCKTQSMAVSLMRLIWHWY*CEYCAC Trigger: ACATGCACAGTATTCGCAGCAGTACCAGTGCCAAAT...CAGCCTCATTAAAGACACTGCCATACTCTGGGTTTTACAACATCTGACATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGCTTTTACGTACACCACGATTAGTTaGAACATACTCAACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GRDTAQGYVLVHNSFAFTYTTIS*NILNQF Trigger: GAACTGGTTGAGTATGTTTCAACTAATCGTGGTGTA...CGTAAAAGCGAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGCTTTTACGTGTTGGACAAACTTCTaGTCAATGTATCGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GRDTAQGYVLVHNSFAFTCWTNF*SMYRFA Trigger: TGCAAAGCGATACATTGATCAGAAGTTTGTCCAACA...CGTAAAAGCGAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | GGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGCTTTTACGAAACTGCTTATGCTCTaGTTTCAGTGGCAATGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GRDTAQGYVLVHNSFAFTKLLML*FQWQCK Trigger: TTTGCATTGCCACTGAAAGCAGAGCATAAGCAGTTT...CGTAAAAGCGAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | GGAAATGTCAGATGTTGTAAAACCCAGAGTATGGCAGTGTCTTTAATGAGGCTGACGCACTTGGATATCTaGTTAAAAAGCGGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GNVRCCKTQSMAVSLMRLTHLDI*LKSGSS Trigger: TGAAGAGCCGCTTTTTAAGCAGATATCCAAGTGCGT...CAGCCTCATTAAAGACACTGCCATACTCTGGGTTTTACAACATCTGACATTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGTACAGTGCTCTTTCTaGAACCTGGAAATGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFVQCSF*NLEMRA Trigger: AGCTCTCATTTCCAGGTTGCAGAAAGAGCACTGTAC...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCTGGCAGAAAAGCTCTTaGTGTTCATTTGAAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFWQKSS*CSFEVA Trigger: TGCCACTTCAAATGAACAGCAAGAGCTTTTCTGCCA...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGATGTATCGCTTTGCAATaGTGGGCTGGAAATCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRCIALQ*WAGNQD Trigger: GTCCTGATTTCCAGCCCAGCATTGCAAAGCGATACA...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | GGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGCTTTTACGACCTTCATTAGAAACTaGTTATGCTCTGCTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GRDTAQGYVLVHNSFAFTTFIRN*LCSAFS Trigger: ACTGAAAGCAGAGCATAAGCAGTTTCTAATGAAGGT...CGTAAAAGCGAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | GGAAATGTCAGATGTTGTAAAACCCAGAGTATGGCAGTGTCTTTAATGAGGCTGTATATCAGAATACGCTaGTTCAACAATTACACCACG | + |
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Preference number: 4 (lower is better) Translates to: GNVRCCKTQSMAVSLMRLYIRIR*FNNYTT Trigger: CGTGGTGTAATTGTTGAATCAGCGTATTCTGATATA...CAGCCTCATTAAAGACACTGCCATACTCTGGGTTTTACAACATCTGACATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCCACATTGTACACCAGTaGTACAATAGTCTGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFHIVHQ*YNSLIP Trigger: TGGAATCAGACTATTGTAGCACTGGTGTACAATGTG...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR TCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGATTTGCTCTTCAAGTCTaGGACAGAGTCCATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRFALQV*DRVHEI Trigger: GATTTCATGGACTCTGTCTCAGACTTGAAGAGCAAA...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGAATTCCAGAAGTACAGTaGTCTTTCTGCAACCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRIPEVQ*SFCNLE Trigger: TTCCAGGTTGCAGAAAGAGCACTGTACTTCTGGAAT...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTAATCAATGTATCGCTTTaGAATGCTGGGCTGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: IILSLLRLPGKTGLLIILINVSL*NAGLEI Trigger: GATTTCCAGCCCAGCATTGCAAAGCGATACATTGAT...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGACAAGGCCAATCCTTTTaGAGTATGCATAGGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRQGQSF*SMHRNK Trigger: CTTATTCCTATGCATACTGCAAAAGGATTGGCCTTG...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTATTCCGGGTCAAAATCTaGATTATCACTTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IILSLLRLPGKTGLLIILFRVKI*IITWRK Trigger: CTTCCTCCAAGTGATAATCCAGATTTTGACCCGGAA...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR GCA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTATCACCTCTTTCTGACTaGATGTTTTTGGCCAAAATT | + |
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Preference number: 4 (lower is better) Translates to: IILSLLRLPGKTGLLIILSPLSD*MFLAKI Trigger: AATTTTGGCCAAAAACATGCAGTCAGAAAGAGGTGA...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CCA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGAGCTGGCAAACATGATTaGCAGGATTTTATCAATATT | + |
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Preference number: 4 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRAGKHD*QDFINI Trigger: AATATTGATAAAATCCTGCCAATCATGTTTGCCAGC...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS TCA 90 bp | TGCAGCTCCGCCTGGCTGCCCTGGCTGCGGAACTGCGACGAGCCCTaGGAGCGCTTCTGCCTCTGCGCCTTGCGCACCGATTTCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: CSSAWLPWLRNCDEP*ERFCLCALRTDFRV Trigger: CACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCTCTCAGGGCTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGGCGGAGCTGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS TCA 90 bp | CCTGAGAGCGCTTCTGCCTCTGCGCCTTGCGCACCGATTTCCGGGTaGAGCCGTCCACTTTCTCCGAGGCCGAGATGGCGGCGCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: PESASASAPCAPISG*SRPLSPRPRWRRRQ Trigger: TTGCCTGCGCCGCCATCTCGGCCTCGGAGAAAGTGGACGGCTTCACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCTCTCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | GGAGGTGAGCCTCGGGTCCACCCGTGGCCTGTGCTGCTCCGCACACGCTCCGGGAATCTGGATTATCACTaGGAGGAAGTGTCCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GGEPRVHPWPVLLRTRSGNLDYH*EEVSGR Trigger: TCTTCCGGACACTTCCTCCAAGTGATAATCCAGATT...CCCGGAGCGTGTGCGGAGCAGCACAGGCCACGGGTGGACCCGAGGCTCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | CACACCTCTCTAGGAGAGGTGAGGGAAGGGCAACCCCTCCGCTTATCTTACGAGAGCTCAGCCACACCATaGAAATGTTCCGTTTCATAT | + |
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Preference number: 5 (lower is better) Translates to: HTSLGEVREGQPLRLSYESSATP*KCSVSY Trigger: ATATGAAACGGAACATTTCAATGGTGTGGCTGAGCT...CTCGTAAGATAAGCGGAGGGGTTGCCCTTCCCTCACCTCTCCTAGAGAGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTATTCTGCCTCTGCGCCTaGCGCACCGATTTCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: IILSLLRLPGKTGLLIILFCLCA*RTDFRV Trigger: CACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAA...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTATTTGAAGTGGCATCTTaGAGCTGGGGCAGGGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: IILSLLRLPGKTGLLIILFEVAS*SWGRGC Trigger: GCACCCCCTGCCCCAGCTCAAAGATGCCACTTCAAA...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | GGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGCTTTTACGGATCAATGTATCGCTTaGCAATGCTGGGCTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: GRDTAQGYVLVHNSFAFTDQCIA*QCWAGN Trigger: ATTTCCAGCCCAGCATTGCAAAGCGATACATTGATC...CGTAAAAGCGAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCAAGCTCCAGGAGCTGTaGGACAAACTTCTGATCAAT | + |
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Preference number: 5 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFKLQEL*DKLLIN Trigger: ATTGATCAGAAGTTTGTCCAACAGCTCCTGGAGCTT...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | TTTAATACTTTGTGCTTCAGAAGCCTGGAAATGTCAGATGTTGTAAAACCCAGAGAGCTGGAGACGCACTaGGATATCTGCTTAAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: FNTLCFRSLEMSDVVKPRELETH*DICLKS Trigger: GCTTTTTAAGCAGATATCCAAGTGCGTCTCCAGCTC...TCTGGGTTTTACAACATCTGACATTTCCAGGCTTCTGAAGCACAAAGTATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCAGGGTTTTCAGCACATaGTACACCAGTGCTACAATA | + |
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Preference number: 5 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFRVFST*YTSATI Trigger: TATTGTAGCACTGGTGTACAATGTGCTGAAAACCCT...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATAATTCTTTCGCTTTTACGCTTGCCAGGAAAAACTGGCCTCCTAATTATATTAAGGTCGTCAAAAAGCTaGCCGTTCATCTCCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: IILSLLRLPGKTGLLIILRSSKS*PFISMR Trigger: CCTCATGGAGATGAACGGCAAGCTTTTTGACGACCT...TAATATAATTAGGAGGCCAGTTTTTCCTGGCAAGCGTAAAAGCGAAAGAATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS-3UTR CAA 90 bp | ATATACTGTGGCCGTGATACAGCACAGGGCTATGTTTTAGTCCATAATTCTTTCGGCAATGCAAAGCCATaGATGATACTTCCCAATATT | + |
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Preference number: 5 (lower is better) Translates to: IYCGRDTAQGYVLVHNSFGNAKP*MILPNI Trigger: AATATTGGGAAGTATCATCAATGGCTTTGCATTGCC...GAAAGAATTATGGACTAAAACATAGCCCTGTGCTGTATCACGGCCACAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS TCA 72 bp | GCCTGGCTGCCCTGGCTGCGGAACTGCGACGAGCCCTaGGAGCGCTTCTGCCTCTGCGCCTTGCGCACCGAT | + |
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Preference number: 6 (lower is better) Translates to: AWLPWLRNCDEP*ERFCLCALRTD Trigger: ATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCTCTCAGGGCTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS TCA 72 bp | GCTTCTGCCTCTGCGCCTTGCGCACCGATTTCCGGGTaGAGCCGTCCACTTTCTCCGAGGCCGAGATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ASASAPCAPISG*SRPLSPRPRWR Trigger: CCGCCATCTCGGCCTCGGAGAAAGTGGACGGCTTCACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS TCA 72 bp | CAGCGTCGCTCTTTTAATTTCTTTGCTCTTCAAGTCTaGGACAGAGTCCATGAAATCAAACAGTACACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QRRSFNFFALQV*DRVHEIKQYTA Trigger: TGCTGTGTACTGTTTGATTTCATGGACTCTGTCTCAGACTTGAAGAGCAAAGAAATTAAAAGAGCGACGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS CAA 72 bp | TCAACCAGTTCATTCAGCGTCGCTCTTTTAATTTCTTaGCTCTTCAAGTCTGAGACAGAGTCCATGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: STSSFSVALLIS*LFKSETESMKS Trigger: TGATTTCATGGACTCTGTCTCAGACTTGAAGAGCAAAGAAATTAAAAGAGCGACGCTGAATGAACTGGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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| CDS CAA 90 bp | GAAACATACTCAACCAGTTCATTCAGCGTCGCTCTTTTAATTTCTTaGCTCTTCAAGTCTGAGACAGAGTCCATGAAATCAAACAGTACA | + |
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Preference number: 6 (lower is better) Translates to: ETYSTSSFSVALLIS*LFKSETESMKSNST Trigger: TGTACTGTTTGATTTCATGGACTCTGTCTCAGACTTGAAGAGCAAAGAAATTAAAAGAGCGACGCTGAATGAACTGGTTGAGTATGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067976.9 |
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