Pregenerated sensors for PPP2R3D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093803Ensembl transcript IDs: ENSMUST00000180233.4, ENSMUST00000187126.3, ENSMUST00000188509.2, ENSMUST00000189707.3, ENSMUST00000216394.2, ENSMUST00000217354.3, ENSMUST00000239563.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGACACAAAGCCCCCACAGCTACCGTGGGAGAGGACGGCTCAGATaGGCTGACTTCTTTCTTCCGCAAGGTGGCACCGCACACCTGACC | + |
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Preference number: 1 (lower is better) Translates to: WTQSPHSYRGRGRLR*ADFFLPQGGTAHLT Trigger: GGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAAGAAGTCAGCGCATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CCA 90 bp | TGGGAGTCTCACACTGGAAGTGGGGTGTGTGTCCTAAACAGGAAGTaGGCGTGTCATTCTCCTGAGGGATCGCGGGAGGTTGGCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: WESHTGSGVCVLNRK*ACHSPEGSREVGLT Trigger: AGTCAGGCCAACCTCCCGCGATCCCTCAGGAGAATGACACGCCCACTTCCTGTTTAGGACACACACCCCACTTCCAGTGTGAGACTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR TCA 90 bp | CTAGGATGTTCTACTCCGATATCTACCTGCTTCTGCCCTCCTACCTaGGCTTTTAACAAACAGTGGGCCACCACCAAGACAGGCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LGCSTPISTCFCPPT*AFNKQWATTKTGPF Trigger: GAAAGGGCCTGTCTTGGTGGTGGCCCACTGTTTGTTAAAAGCTCAGGTAGGAGGGCAGAAGCAGGTAGATATCGGAGTAGAACATCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CCA 90 bp | TCAATGAGAACAAGAGGAAAAGTGTGGGAAATGGGAGTCTCACACTaGAAGTGGGGTGTGTGTCCTAAACAGGAAGTGGGCGTGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: SMRTRGKVWEMGVSH*KWGVCPKQEVGVSF Trigger: GAATGACACGCCCACTTCCTGTTTAGGACACACACCCCACTTCCAGTGTGAGACTCCCATTTCCCACACTTTTCCTCTTGTTCTCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CCA 90 bp | GATTGTGAGGCACCATGTGGTTCCTGGGAATTGAACTCAGGACCTTaGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: DCEAPCGSWELNSGP*EQLPVLLTTGPLLQ Trigger: CTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGTCCTGAGTTCAATTCCCAGGAACCACATGGTGCCTCACAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR GCA 90 bp | TTTTCTCATGAATGTTATCTTGGCATGATAAGTTTGATCTTACACTaGACTCAGAAGGGACACACATCTGCAATGACATGTTCATTTTGG | + |
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Preference number: 1 (lower is better) Translates to: FSHECYLGMISLILH*TQKGHTSAMTCSFW Trigger: CCAAAATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAACTTATCATGCCAAGATAACATTCATGAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CCA 90 bp | ATATCCCAGACCCAGAAAGACAAATACCACGTGTTGTGTCTTATGTaGATGGTAACACTGAATCTTCATAGATGTGTATTTAAATTAGAG | + |
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Preference number: 1 (lower is better) Translates to: ISQTQKDKYHVLCLM*MVTLNLHRCVFKLE Trigger: CTCTAATTTAAATACACATCTATGAAGATTCAGTGTTACCATCCACATAAGACACAACACGTGGTATTTGTCTTTCTGGGTCTGGGATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGGCGCGGGAGGTTGGCCTaGCTGCCCACCGCCCACCGT | + |
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Preference number: 2 (lower is better) Translates to: SVLLPLMDTKPPQLPWERRGRLA*LPTAHR Trigger: ACGGTGGGCGGTGGGCAGTCAGGCCAACCTCCCGCG...CCTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGACTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGACTGGGAGGCACAAGTaGGCAGTTCCTGGGCGCACA | + |
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Preference number: 2 (lower is better) Translates to: GRLSPPPTHGHKAPTATVTGRHK*AVPGRT Trigger: TGTGCGCCCAGGAACTGCGCACTTGTGCCTCCCAGT...CACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGATGTGTGAGGCACCCTaGACACAGCAGGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSPPPTHGHKAPTATVGEMCEAP*TQQGCR Trigger: CCTGCAGCCCTGCTGTGTGCAGGGTGCCTCACACAT...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGGACGGCTCAGATGCGCCTTTCTTCCGCAAGGTaGCACCGCACACCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: LMDTKPPQLPWERTAQMRLSSAR*HRTPDL Trigger: GAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAAG...GCGCATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGCTTGGGAGGGATCACTaGGAGGCACAAGTGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSPPPTHGHKAPTATVGELGRDH*EAQVRS Trigger: ACTGCGCACTTGTGCCTCCCAGTGATCCCTCCCAAG...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTAAAAGTGAGACTGGGTTTCTGTTGAGAAAGGAGCCTTGTGGTGTGGGCCGCGGGAGGTTGGCCTaGCTGCCCACCGCCCACCGT | + |
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Preference number: 2 (lower is better) Translates to: SFKSETGFLLRKEPCGVGRGRLA*LPTAHR Trigger: ACGGTGGGCGGTGGGCAGTCAGGCCAACCTCCCGCG...GCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGACTGGGAGGCACAAGTaGGCAGTTCCTGGGCGCACA | + |
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Preference number: 2 (lower is better) Translates to: FLPQGGTAHLTSVSSLHQTGRHK*AVPGRT Trigger: TGTGCGCCCAGGAACTGCGCACTTGTGCCTCCCAGT...CTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGGACAAACACGTGACCGCCTCCTCCTCCCACTCATaGACACAAAGCCCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: TAHLTSVSSLHQDKHVTASSSHS*TQSPHS Trigger: GCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGA...GGCGGTCACGTGTTTGTCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGCTTGGGAGGGATCACTaGGAGGCACAAGTGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: FLPQGGTAHLTSVSSLHQLGRDH*EAQVRS Trigger: ACTGCGCACTTGTGCCTCCCAGTGATCCCTCCCAAG...CTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGCTTCATGCTAATGAGTaGGCGGGGCATGTATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LSPPPTHGHKAPTATVGELHANE*AGHVCQ Trigger: TTGACATACATGCCCCGCCCACTCATTAGCATGAAG...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGTTGGGAACAGTGTGGCAGTGTGGAGGGTTTCTCTGTGTAGCCCTGGCTAGACTGGGTTTCTGTTaGGAAAGGAGCCTTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: ALLGTVWQCGGFLCVALARLGFC*ERSLVV Trigger: CACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCT...AGCCAGGGCTACACAGAGAAACCCTCCACACTGCCACACTGTTCCCAACAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGGACGGCTCAGATGCGCCTGTGCACCCCAGGGTaGAAAAACAAATCAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LMDTKPPQLPWERTAQMRLCTPG*KNKSNF Trigger: AAAGTTTGATTTGTTTTTTCACCCTGGGGTGCACAG...GCGCATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAACTGGGAGGCACAAGTaGGCAGTTCCTGGGCGCACA | + |
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Preference number: 2 (lower is better) Translates to: GGYFEALFRWIRWKTLDRTGRHK*AVPGRT Trigger: TGTGCGCCCAGGAACTGCGCACTTGTGCCTCCCAGT...TCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTAAAAGTGAGACTGGGTTTCTGTTGAGAAAGGAGCCTTGTGGTGTGGGCCCCCCACAGCTACCGTaGGAGAGGACGGCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SFKSETGFLLRKEPCGVGPPQLP*ERTAQM Trigger: CATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGG...GCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTAAAAGTGAGACTGGGTTTCTGTTGAGAAAGGAGCCTTGTGGTGTGGGCATGTGTGAGGCACCCTaGACACAGCAGGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SFKSETGFLLRKEPCGVGMCEAP*TQQGCR Trigger: CCTGCAGCCCTGCTGTGTGCAGGGTGCCTCACACAT...GCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTTGTGGTGTGGGCGACTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAAACAACCAAGTaGTCGCTAGGGCATTTTATA | + |
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Preference number: 2 (lower is better) Translates to: EPCGVGDSVLLPLMDTKPPQTTK*SLGHFI Trigger: TATAAAATGCCCTAGCGAGCACTTGGTTGTTTGTGG...GGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCCACACCACAAGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGGACAAACACGTCCGCTCATCTATTTGTaGCCACTGAACCCTACTAAG | + |
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Preference number: 2 (lower is better) Translates to: RWHRTPDLCVLIASGQTRPLIYL*PLNPTK Trigger: CTTAGTAGGGTTCAGTGGTCACAAATAGATGAGCGG...ACGTGTTTGTCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGTACGCAGCAAACATGTaGATACTTACACACACAACA | + |
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Preference number: 2 (lower is better) Translates to: LSPPPTHGHKAPTATVGEYAANM*ILTHTT Trigger: TGTTGTGTGTGTAAGTATCCACATGTTTGCTGCGTA...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCTTACACTGCACTCAGAAGGGACACACATCTGCAATGACATGTTCATTCGTGTTGCCCACCCCTaGGAGCCTGACTGTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: FDLTLHSEGTHICNDMFIRVAHP*EPDCAP Trigger: GGGTGCACAGTCAGGCTCTCAGGGGTGGGCAACACG...AATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CAA 90 bp | GAGAGATTGCAGAGGAGTATAGTGGTACTTTTAGGAGTTGTGGCCTaGTTGGGAACAGTGTGGCAGTGTGGAGGGTTTCTCTGTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ERLQRSIVVLLGVVA*LGTVWQCGGFLCVA Trigger: GGCTACACAGAGAAACCCTCCACACTGCCACACTGTTCCCAACAAGGCCACAACTCCTAAAAGTACCACTATACTCCTCTGCAATCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAGTCTCACACTGGAAGTaGGGTGTGTGTCCTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: GGYFEALFRWIRWKTLDRVSHWK*GVCPKQ Trigger: CTGTTTAGGACACACACCCCACTTCCAGTGTGAGAC...TCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGCGGGGCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGTCTCACACTGGAAGTaGGGTGTGTGTCCTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: TGGRGYANKKLDHREQLHVSHWK*GVCPKQ Trigger: CTGTTTAGGACACACACCCCACTTCCAGTGTGAGAC...ATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGCCCCGCCCACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGGACAAACACGTGACCGCCTACGCAGCAAACATGTaGATACTTACACACACAACA | + |
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Preference number: 2 (lower is better) Translates to: TAHLTSVSSLHQDKHVTAYAANM*ILTHTT Trigger: TGTTGTGTGTGTAAGTATCCACATGTTTGCTGCGTA...GGCGGTCACGTGTTTGTCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGACCGCTCATCTATTTGTaGCCACTGAACCCTACTAAG | + |
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Preference number: 2 (lower is better) Translates to: GGYFEALFRWIRWKTLDRPLIYL*PLNPTK Trigger: CTTAGTAGGGTTCAGTGGTCACAAATAGATGAGCGG...TCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTAAGAGGACGGCTCAGATaGGCTGACTTCTTTCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: TLGTIASTLNHRTITPGLRGRLR*ADFFLP Trigger: CGGAAGAAAGAAGTCAGCGCATCTGAGCCGTCCTCT...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | GATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAGTTGCCGCTCATCTATTTGTaGCCACTGAACCCTACTAAG | + |
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Preference number: 2 (lower is better) Translates to: DISRHCSVGLDGRRWTELPLIYL*PLNPTK Trigger: CTTAGTAGGGTTCAGTGGTCACAAATAGATGAGCGG...CAACTCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGCAGAATGGAGAAAGGTaGTGTTTTAAGTTCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: FLPQGGTAHLTSVSSLHQQNGER*CFKFCH Trigger: ATGACAGAACTTAAAACATCACCTTTCTCCATTCTG...CTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGCTAATGAGTGGAGAGGACGGCTCAGATaGGCTGACTTCTTTCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: GYANKKLDHREQLHANEWRGRLR*ADFFLP Trigger: CGGAAGAAAGAAGTCAGCGCATCTGAGCCGTCCTCT...CCACTCATTAGCATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR GCA 90 bp | GGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAGTTCTGAGGTGGCCTTCCTaGAGAGAAAACCTAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GYFEALFRWIRWKTLDRVLRWPS*RENLKH Trigger: ATGCTTTAGGTTTTCTCTGCAGGAAGGCCACCTCAG...AACTCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCTTACACTGCACTCAGAAGGGACACACATCTGCAATGACATGTTCATTCTTTCTTCCGCAAGGTaGCACCGCACACCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: FDLTLHSEGTHICNDMFILSSAR*HRTPDL Trigger: GAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAAG...AATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTACAGGAAATCAAGTGTCCATTTCCTTTAAAAGTGAGACTGGGTTTCTGTCCCCCACAGCTACCGTaGGAGAGGACGGCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: ILQEIKCPFPLKVRLGFCPPQLP*ERTAQM Trigger: CATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGG...ACAGAAACCCAGTCTCACTTTTAAAGGAAATGGACACTTGATTTCCTGTAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTACAGGAAATCAAGTGTCCATTTCCTTTAAAAGTGAGACTGGGTTTCTGTCTTGGGAGGGATCACTaGGAGGCACAAGTGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ILQEIKCPFPLKVRLGFCLGRDH*EAQVRS Trigger: ACTGCGCACTTGTGCCTCCCAGTGATCCCTCCCAAG...ACAGAAACCCAGTCTCACTTTTAAAGGAAATGGACACTTGATTTCCTGTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR CCA 90 bp | ATTACTGCTGTTCTAATCTCCTTGGTGTCCCTGGTTTATTTTCTCATGAATGTTTCCTCCTCCCACTCATaGACACAAAGCCCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: ITAVLISLVSLVYFLMNVSSSHS*TQSPHS Trigger: GCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGA...AACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGCAGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTAGGGCATGTATGTCAATaGGAACAAGAGGAAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TLGTIASTLNHRTITPGLGHVCQ*EQEEKC Trigger: ACACTTTTCCTCTTGTTCTCATTGACATACATGCCC...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGCTAATGAGTGGGGGGCATGTATGTCAATaGGAACAAGAGGAAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: AMLIRSWTIENSFMLMSGGHVCQ*EQEEKC Trigger: ACACTTTTCCTCTTGTTCTCATTGACATACATGCCC...CCCACTCATTAGCATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCTTACACTGCACTCAGAAGGGACACACATCTGCAATGACATGTTCATTTTCTGCCCTCCTACCTaGGCTTTTAACAAACAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FDLTLHSEGTHICNDMFIFCPPT*AFNKQW Trigger: CCACTGTTTGTTAAAAGCTCAGGTAGGAGGGCAGAA...AATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTACAGAATGGAGAAAGGTaGTGTTTTAAGTTCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGTIASTLNHRTITPGLQNGER*CFKFCH Trigger: ATGACAGAACTTAAAACATCACCTTTCTCCATTCTG...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTAACCCTGTTATGTTCATaGCATTTATGCATACTAATG | + |
|
Preference number: 2 (lower is better) Translates to: TLGTIASTLNHRTITPGLTLLCS*HLCILM Trigger: CATTAGTATGCATAAATGGCATGAACATAACAGGGT...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CAA 90 bp | GTCCCTGGTTTATTTTCTCATGAATGTTATCTTGGCATGATAAGTTaGATCTTACACTGCACTCAGAAGGGACACACATCTGCAATGACA | + |
|
Preference number: 2 (lower is better) Translates to: VPGLFSHECYLGMIS*ILHCTQKGHTSAMT Trigger: TGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAACTTATCATGCCAAGATAACATTCATGAGAAAATAAACCAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTACTGCTGTTCTAATCTCCTTGGTGTCCCTGGTTTATTTTCTCATGAATGTTTGTCGACCATTCTTCTaGAAAACACACTGCTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ITAVLISLVSLVYFLMNVCRPFF*KTHCCG Trigger: ACCACAGCAGTGTGTTTTCCAGAAGAATGGTCGACA...AACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGCAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | AGCCCCCGATGTCACCCCTGCCTTGGGAGGGATCACTaGGAGGCACAAGTGCGCAGTTCCTGGGCGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRCHPCLGRDH*EAQVRSSWAHS Trigger: ACTGTGCGCCCAGGAACTGCGCACTTGTGCCTCCCAGTGATCCCTCCCAAGGCAGGGGTGACATCGGGGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCGACTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGGATGTCACCCCTGCCTaGGGAGGGATCACTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGDSVLLPLMDTKPPQLPDVTPA*GGITGR Trigger: CCTCCCAGTGATCCCTCCCAAGGCAGGGGTGACATC...CGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTTGTGGTGTGGGCGACTCAGTCCTCCTCCCACTCATGGACACAAAGCCCGATGTCACCCCTGCCTaGGGAGGGATCACTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPCGVGDSVLLPLMDTKPDVTPA*GGITGR Trigger: CCTCCCAGTGATCCCTCCCAAGGCAGGGGTGACATC...GGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCCACACCACAAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR GCA 72 bp | AGCCCCCACAGCTACCGTGGGAGAGGACGGCTCAGATaGGCTGACTTCTTTCTTCCGCAAGGTGGCACCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPHSYRGRGRLR*ADFFLPQGGTA Trigger: TGCGGTGCCACCTTGCGGAAGAAAGAAGTCAGCGCATCTGAGCCGTCCTCTCCCACGGTAGCTGTGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | CTTGTGGTGTGGGCGACTCAGTCCTCCTCCCACTCATaGACACAAAGCCCCCACAGCTACCGTGGGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVVWATQSSSHS*TQSPHSYRGRG Trigger: TCCTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCCACACCACAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGGAGATGTCACCCCTGCCTaGGGAGGGATCACTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSARWHRTPDLCVLIASGDVTPA*GGITGR Trigger: CCTCCCAGTGATCCCTCCCAAGGCAGGGGTGACATC...TCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR TCA 72 bp | ACCATTCTTCTGGAAAACACACTGAAACGTCATGTGTaGGGCACCCTGCACACAGCAGGGCTGCAGGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: TILLENTLKRHV*GTLHTAGLQAT Trigger: CGTGGCCTGCAGCCCTGCTGTGTGCAGGGTGCCTCACACATGACGTTTCAGTGTGTTTTCCAGAAGAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187126.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTGTTGGGAACAGTGTGGCAGTGTGGAGGGTTTCTCTGTGTAGCCCTGGCTGAGACTGGGTTTCTGTaGAGAAAGGAGCCTTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ALLGTVWQCGGFLCVALAETGFL*RKEPCG Trigger: ACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTC...AGCCAGGGCTACACAGAGAAACCCTCCACACTGCCACACTGTTCCCAACAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | GTACTTTTAGGAGTTGTGGCCTTGTTGGGAACAGTGTaGCAGTGTGGAGGGTTTCTCTGTGTAGCCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLGVVALLGTV*QCGGFLCVALA Trigger: AGCCAGGGCTACACAGAGAAACCCTCCACACTGCCACACTGTTCCCAACAAGGCCACAACTCCTAAAAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | GCACCATGTGGTTCCTGGGAATTGAACTCAGGACCTTaGGAACAATTGCCAGTACTCTTAACCACAGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: APCGSWELNSGP*EQLPVLLTTGP Trigger: TGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGTCCTGAGTTCAATTCCCAGGAACCACATGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTAAAAGTGAGACTGGGTTTCTGTTGAGAAAGGAGCCTTGTGGTGTGGGCACCTCTGTGTCCTCATaGCATCAGGACAAACACGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFKSETGFLLRKEPCGVGTSVSS*HQDKHV Trigger: CACGTGTTTGTCCTGATGCAATGAGGACACAGAGGT...GCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR TCA 72 bp | TCAGAAGGGGTCGCGATGATACCGCTCATCTATTTGTaGCCACTGAACCCTACTAAGTGTCGACCATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SEGVAMIPLIYL*PLNPTKCRPFF Trigger: GAAGAATGGTCGACACTTAGTAGGGTTCAGTGGTCACAAATAGATGAGCGGTATCATCGCGACCCCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR TCA 72 bp | TGTCCATTTCCTTTAAAAGTGAGACTGGGTTTCTGTTaGGAAAGGAGCCTTGTGGTGTGGGCGACTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CPFPLKVRLGFC*ERSLVVWATQS Trigger: GGACTGAGTCGCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGAAATGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR GCA 72 bp | ATACTAATGAGCTTTATGCTACTGAGGTGGCCTTCCTaGAGAGAAAACCTAAAGCATAACAGGTGGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILMSFMLLRWPS*RENLKHNRWAG Trigger: CCCCGCCCACCTGTTATGCTTTAGGTTTTCTCTGCAGGAAGGCCACCTCAGTAGCATAAAGCTCATTAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | GGTGGATATTTCGAGGCATTGTTCCGTTGGATTAGATaGAAGACGCTGGACCGAGTTGTCAAATGGCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGYFEALFRWIR*KTLDRVVKWRS Trigger: TGAACGCCATTTGACAACTCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR GCA 72 bp | TACCTGACCCCGACCCTGTTATGTTCATGCCATTTATaGATACTAATGAGTATGCTAATGAGGGGCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLTPTLLCSCHL*ILMSMLMRGRV Trigger: CACCCTGCCCCTCATTAGCATACTCATTAGTATGCATAAATGGCATGAACATAACAGGGTCGGGGTCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR GCA 72 bp | ACTCAACCCTACCTGACCCCGACCCTGTTATGTTCATaGCATTTATGCATACTAATGAGTATGCTAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQPYLTPTLLCS*HLCILMSMLMR Trigger: CCTCATTAGCATACTCATTAGTATGCATAAATGGCATGAACATAACAGGGTCGGGGTCAGGTAGGGTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR GCA 72 bp | TTTCTTCTTCGTGTCCTGCAACCACAAACAACCAAGTaGTCGCTAGGGCATTTTATAAACTATGCCATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLLRVLQPQTTK*SLGHFINYAIS Trigger: GCTAATGGCATAGTTTATAAAATGCCCTAGCGAGCACTTGGTTGTTTGTGGTTGCAGGACACGAAGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTACTGCTGTTCTAATCTCCTTGGTGTCCCTGGTTTATTTTCTCATGAATGTTACCTCTGTGTCCTCATaGCATCAGGACAAACACGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITAVLISLVSLVYFLMNVTSVSS*HQDKHV Trigger: CACGTGTTTGTCCTGATGCAATGAGGACACAGAGGT...AACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGCAGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR TCA 72 bp | TCTTACACTGCACTCAGAAGGGACACACATCTGCAATaGCATGTTCATTTTGGGTGTCAATTACTGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SYTALRRDTHLQ*HVHFGCQLLKI Trigger: AATTTTCAGTAATTGACACCCAAAATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CCA 72 bp | ACCCAGAAAGACAAATACCACGTGTTGTGTCTTATGTaGATGGTAACACTGAATCTTCATAGATGTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TQKDKYHVLCLM*MVTLNLHRCVF Trigger: AAATACACATCTATGAAGATTCAGTGTTACCATCCACATAAGACACAACACGTGGTATTTGTCTTTCTGGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS-3UTR GCA 90 bp | GGGCGACTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGTCGTCGTCGTCCTCTaGCATGGCCTCCTCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSPPPTHGHKAPTATVVVVVL*HGLLGH Trigger: GTGGCCGAGGAGGCCATGGCAGAGGACGACGACGAC...CACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAGTCGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS-3UTR CCA 90 bp | CTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGGACCTATGGGGTCGGACCTaGGGTGGGCAGGGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPQGGTAHLTSVSSLHQDLWGRT*GGQGHS Trigger: ACTATGGCCCTGCCCACCCCAGGTCCGACCCCATAG...GTCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTCCGCAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATTGCATCAGCGTCGTCCTCTGCCATaGCCTCCTCGGCCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPQGGTAHLTSVSSLHQRRPLP*PPRPRG Trigger: TCCTCGTGGCCGAGGAGGCCATGGCAGAGGACGACG...CTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTGCGGAAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGCTCTACCTCCAACTGTaGCACAGCCTGCAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPTHGHKAPTATVGELYLQL*HSLQEA Trigger: AGCTTCCTGCAGGCTGTGTCACAGTTGGAGGTAGAG...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | GGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAGTTCACCCCGGGCGGCCATaGGCTGGGCCTGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYFEALFRWIRWKTLDRVHPGRP*AGPAPH Trigger: ATGAGGAGCAGGCCCAGCGCATGGCCGCCCGGGGTG...AACTCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | CAAGGTGGCACCGCACACCTGACCTCTGTGTCCTCATaGCATCAGGACAAACACGTGACCGCCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGTAHLTSVSS*HQDKHVTAFGQ Trigger: CTGACCAAAGGCGGTCACGTGTTTGTCCTGATGCAATGAGGACACAGAGGTCAGGTGTGCGGTGCCACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| CDS-3UTR TCA 90 bp | TTTGATCTTACACTGCACTCAGAAGGGACACACATCTGCAATGACATGTTCATTTCAGGTCGCGCAGCGTaGTCCGGCCGGGGCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FDLTLHSEGTHICNDMFISGRAA*SGRGSA Trigger: CGCGCTGCCCCGGCCGGATCACGCTGCGCGACCTGA...AATGAACATGTCATTGCAGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | GGATATTTCGAGGCATTGTTCCGTTGGATTAGATGGAAGACGCTGGACCGAGTTGTGGAAGTCCTTCGCTaGCCTCAGGAAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYFEALFRWIRWKTLDRVVEVLR*PQEGQA Trigger: GGCCTGGCCTTCCTGAGGGCAGCGAAGGACTTCCAC...AACTCGGTCCAGCGTCTTCCATCTAATCCAACGGAACAATGCCTCGAAATATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR CCA 90 bp | GCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGCTAATGAGTGGGCTATGGGGTCGGACCTaGGGTGGGCAGGGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMLIRSWTIENSFMLMSGLWGRT*GGQGHS Trigger: ACTATGGCCCTGCCCACCCCAGGTCCGACCCCATAG...CCCACTCATTAGCATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | GGCACCATGTGGTTCCTGGGAATTGAACTCAGGACCTaGGGAACAATTGCCAGTACTCTTAACCACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GTMWFLGIELRT*GTIASTLNHRT Trigger: GGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGTCCTGAGTTCAATTCCCAGGAACCACATGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS-3UTR CCA 90 bp | GCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGCTAATGAGTGGGGGCACAAAGTCCTCCTaGATGAGGCCACTACACCCG | + |
|
Preference number: 4 (lower is better) Translates to: AMLIRSWTIENSFMLMSGGTKSS*MRPLHP Trigger: CGGGTGTAGTGGCCTCATCCAGGAGGACTTTGTGCC...CCCACTCATTAGCATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTAACTCGAGCTCAAACATaGAGAGAGCGCCGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLGTIASTLNHRTITPGLTRAQT*RERRHR Trigger: ACGGTGACGGCGCTCTCTCCATGTTTGAGCTCGAGT...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | CAGAGGAGTATAGTGGTACTTTTAGGAGTTGTGGCCTaGTTGGGAACAGTGTGGCAGTGTGGAGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRSIVVLLGVVA*LGTVWQCGGFL Trigger: GAGAAACCCTCCACACTGCCACACTGTTCCCAACAAGGCCACAACTCCTAAAAGTACCACTATACTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGGAACAATTGCCAGTACTCTTAACCACAGGACCATTACTCCAGGACTAGAGTTCACCACATCCTaGAGGAAGGGCACAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGTIASTLNHRTITPGLEFTTS*RKGTKS Trigger: GGACTTTGTGCCCTTCCTGCAGGATGTGGTGAACTC...TAGTCCTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | GCTATGCTAATAAGAAGCTGGACCATAGAGAACAGCTTCATGCTAATGAGTGGGAACTGTGACACAGCCTaGAGGAAGCTGCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMLIRSWTIENSFMLMSGNCDTA*RKLLRL Trigger: AAGGCGCAGCAGCTTCCTGCAGGCTGTGTCACAGTT...CCCACTCATTAGCATGAAGCTGTTCTCTATGGTCCAGCTTCTTATTAGCATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | GTGTCCATTTCCTTTAAAAGTGAGACTGGGTTTCTGTaGAGAAAGGAGCCTTGTGGTGTGGGCGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSISFKSETGFL*RKEPCGVGDSV Trigger: GACTGAGTCGCCCACACCACAAGGCTCCTTTCTCAACAGAAACCCAGTCTCACTTTTAAAGGAAATGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187126.3 ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | GGTTCCTGGGAATTGAACTCAGGACCTTGGGAACAATaGCCAGTACTCTTAACCACAGGACCATTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSWELNSGPWEQ*PVLLTTGPLLQ Trigger: CTGGAGTAATGGTCCTGTGGTTAAGAGTACTGGCAATTGTTCCCAAGGTCCTGAGTTCAATTCCCAGGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTACAGGAAATCAAGTGTCCATTTCCTTTAAAAGTGAGACTGGGTTTCTGTCTCGCGCTGCTCCCGTaGCAGGTACTTGTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILQEIKCPFPLKVRLGFCLALLP*QVLVHV Trigger: AACGTGGACAAGTACCTGGCACGGGAGCAGCGCGAG...ACAGAAACCCAGTCTCACTTTTAAAGGAAATGGACACTTGATTTCCTGTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTCTAATCTCCTTGGTGTCCCTGGTTTATTTTCTCATGAATGTTATCTTGTCAGCAGGAATACCTTaGCAACCACGGCCATGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLISLVSLVYFLMNVILSAGIP*QPRPCR Trigger: GCGACATGGCCGTGGTTGCCAAGGTATTCCTGCTGA...CAAGATAACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTCTAATCTCCTTGGTGTCCCTGGTTTATTTTCTCATGAATGTTATCTTGGAACCATACAAAGTCTaGGTAGCTCAGCTTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVLISLVSLVYFLMNVILEPYKV*VAQLPD Trigger: GTCGGGAAGCTGAGCTACGCAGACTTTGTATGGTTC...CAAGATAACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
||
| 3UTR CAA 72 bp | GATATATCCCAGACCCAGAAAGACAAATACCACGTGTaGTGTCTTATGTGGATGGTAACACTGAATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DISQTQKDKYHV*CLMWMVTLNLH Trigger: ATGAAGATTCAGTGTTACCATCCACATAAGACACAACACGTGGTATTTGTCTTTCTGGGTCTGGGATATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CAA 72 bp | CATTACTCCAGGACTATTACTGCTGTTCTAATCTCCTaGGTGTCCCTGGTTTATTTTCTCATGAATGTTATC | + |
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Preference number: 4 (lower is better) Translates to: HYSRTITAVLIS*VSLVYFLMNVI Trigger: GATAACATTCATGAGAAAATAAACCAGGGACACCAAGGAGATTAGAACAGCAGTAATAGTCCTGGAGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| 3UTR CAA 72 bp | TTATTTTCTCATGAATGTTATCTTGGCATGATAAGTTaGATCTTACACTGCACTCAGAAGGGACACACATCT | + |
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Preference number: 4 (lower is better) Translates to: LFSHECYLGMIS*ILHCTQKGHTS Trigger: AGATGTGTGTCCCTTCTGAGTGCAGTGTAAGATCAAACTTATCATGCCAAGATAACATTCATGAGAAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS CCA 90 bp | GGGACTGGGGCGGGGGCTCCTCCTTCCTGTGGGCATGGACCGTCCTaGGTCCCGTCGTTCTCAGCGCGGGCCGCGGCAGCGGTCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTGAGAPPSCGHGPS*VPSFSARAAAAVGR Trigger: CCTCCCGACCGCTGCCGCGGCCCGCGCTGAGAACGACGGGACCCAGGACGGTCCATGCCCACAGGAAGGAGGAGCCCCCGCCCCAGTCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS TCA 90 bp | CGAAGAACTCACCCGCCAGGCCGCACTGCTTCAGGTCGCGCAGCGTaGTCCGGCCGGGGCAGCGCGGGGCGACGAGGTCGAGCACCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RRTHPPGRTASGRAA*SGRGSAGRRGRAPG Trigger: GCCAGGTGCTCGACCTCGTCGCCCCGCGCTGCCCCGGCCGGATCACGCTGCGCGACCTGAAGCAGTGCGGCCTGGCGGGTGAGTTCTTCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189707.3 ENSMUST00000239563.2 |
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| CDS CCA 90 bp | TCCTTCCTGTGGGCATGGACCTGCCGGAAGTCCCGCAGCCACTTCTaGAAGCGCGACGGAAACACCAGATCGCTGCCCCGAGCCAGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SFLWAWTCRKSRSHF*KRDGNTRSLPRASD Trigger: GTCGCTGGCTCGGGGCAGCGATCTGGTGTTTCCGTCGCGCTTCCAGAAGTGGCTGCGGGACTTCCGGCAGGTCCATGCCCACAGGAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188509.2 |
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| CDS CCA 90 bp | GCTCCAGGTCGTCGCAGTCCTCGTCAGCAAGGCCGTAGAGATCTATaGGGTCGGACCTGGGGTGGGCAGGGCCATAGTCAGAGTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: APGRRSPRQQGRRDL*GRTWGGQGHSQSGQ Trigger: CTGCCCACTCTGACTATGGCCCTGCCCACCCCAGGTCCGACCCCATAGATCTCTACGGCCTTGCTGACGAGGACTGCGACGACCTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS GCA 90 bp | GGGCGTAGTCTTGTCCTCCTCGGAGAGCAGGAACCATACAAAGTCTaGGTAGCTCAGCTTCCCGACCTTTCGGGGCAGCTCACCCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: GRSLVLLGEQEPYKV*VAQLPDLSGQLTPV Trigger: GACGGGGGTGAGCTGCCCCGAAAGGTCGGGAAGCTGAGCTACGCAGACTTTGTATGGTTCCTGCTCTCCGAGGAGGACAAGACTACGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS-3UTR CAA 90 bp | CTCAGTCCTCCTCCCACTCATGGACACAAAGCCCCCACAGCTACCGTGGGAGAGAACGACGTCATGCGGTaGATGTCAGGCTCTACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LSPPPTHGHKAPTATVGENDVMR*MSGSTS Trigger: GGAGGTAGAGCCTGACATCAACCGCATGACGTCGTT...CTCTCCCACGGTAGCTGTGGGGGCTTTGTGTCCATGAGTGGGAGGAGGACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS TCA 72 bp | CACCCGCCAGGCCGCACTGCTTCAGGTCGCGCAGCGTaGTCCGGCCGGGGCAGCGCGGGGCGACGAGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: HPPGRTASGRAA*SGRGSAGRRGR Trigger: TCGACCTCGTCGCCCCGCGCTGCCCCGGCCGGATCACGCTGCGCGACCTGAAGCAGTGCGGCCTGGCGGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189707.3 ENSMUST00000239563.2 |
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| CDS CCA 72 bp | GCCCCGAGCCAGCGACGCCAGAGCCTGGCGCACCGCTaGGTCGTCAGGGTCGCGGCGCAGGGCTCGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: APSQRRQSLAHR*VVRVAAQGSYG Trigger: CCCATACGAGCCCTGCGCCGCGACCCTGACGACCCAGCGGTGCGCCAGGCTCTGGCGTCGCTGGCTCGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188509.2 |
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| CDS GCA 72 bp | GCCACTTCTGGAAGCGCGACGGAAACACCAGATCGCTaGCCCGAGCCAGCGACGCCAGAGCCTGGCGCACCG | + |
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Preference number: 6 (lower is better) Translates to: ATSGSATETPDR*PEPATPEPGAP Trigger: CGGTGCGCCAGGCTCTGGCGTCGCTGGCTCGGGGCAGCGATCTGGTGTTTCCGTCGCGCTTCCAGAAGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188509.2 |
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| CDS CCA 72 bp | TGGGCATGGACCTGCCGGAAGTCCCGCAGCCACTTCTaGAAGCGCGACGGAAACACCAGATCGCTGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: WAWTCRKSRSHF*KRDGNTRSLPR Trigger: TCGGGGCAGCGATCTGGTGTTTCCGTCGCGCTTCCAGAAGTGGCTGCGGGACTTCCGGCAGGTCCATGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188509.2 |
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| CDS CCA 72 bp | ACAAAGTCCTCCTGGATGAGGCCACTACACCCGGGGTaGCCCAGCAGCCGCACGAACCGCGCAGCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: TKSSWMRPLHPG*PSSRTNRAASS Trigger: TGATGATGCTGCGCGGTTCGTGCGGCTGCTGGGCCACCCCGGGTGTAGTGGCCTCATCCAGGAGGACTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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| CDS CCA 72 bp | CGTCGCAGTCCTCGTCAGCAAGGCCGTAGAGATCTATaGGGTCGGACCTGGGGTGGGCAGGGCCATAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RRSPRQQGRRDL*GRTWGGQGHSQ Trigger: CTGACTATGGCCCTGCCCACCCCAGGTCCGACCCCATAGATCTCTACGGCCTTGCTGACGAGGACTGCGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217354.3 ENSMUST00000239563.2 |
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| CDS CCA 72 bp | GCGCAGCATCATCATGGCAGGTCAGCAGGAATACCTTaGCAACCACGGCCATGTCGCCCAGACCCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AQHHHGRSAGIP*QPRPCRPDPPS Trigger: GGAGGGCGGGTCTGGGCGACATGGCCGTGGTTGCCAAGGTATTCCTGCTGACCTGCCATGATGATGCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS CAA 72 bp | CGCGCAGCATCATCATGGCAGGTCAGCAGGAATACCTaGGCAACCACGGCCATGTCGCCCAGACCCGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RAASSWQVSRNT*ATTAMSPRPAL Trigger: GAGGGCGGGTCTGGGCGACATGGCCGTGGTTGCCAAGGTATTCCTGCTGACCTGCCATGATGATGCTGCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS GCA 72 bp | AGGAAGGCCAGGCCCGGGTGCGAGTTCACCACATCCTaGAGGAAGGGCACAAAGTCCTCCTGGATGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RKARPGCEFTTS*RKGTKSSWMRP Trigger: TGGCCTCATCCAGGAGGACTTTGTGCCCTTCCTGCAGGATGTGGTGAACTCGCACCCGGGCCTGGCCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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| CDS GCA 72 bp | AAGTCCTTCGCTGCCCTCAGGAAGGCCAGGCCCGGGTaGGAGTTCACCACATCCTGCAGGAAGGGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: KSFAALRKARPG*EFTTSCRKGTK Trigger: CTTTGTGCCCTTCCTGCAGGATGTGGTGAACTCGCACCCGGGCCTGGCCTTCCTGAGGGCAGCGAAGGACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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| CDS GCA 72 bp | CTACCTCCAACTGTGACACAGCCTGCAGGAAGCTGCTaGGCCTTAGCTCCTCACGCGAGATCATCCCTGACC | + |
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Preference number: 6 (lower is better) Translates to: LPPTVTQPAGSC*ALAPHARSSLT Trigger: GGTCAGGGATGATCTCGCGTGAGGAGCTAAGGCGCAGCAGCTTCCTGCAGGCTGTGTCACAGTTGGAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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| CDS GCA 72 bp | TTGATGTCAGGCTCTACCTCCAACTGTGACACAGCCTaGAGGAAGCTGCTGCGCCTTAGCTCCTCACGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LMSGSTSNCDTA*RKLLRLSSSRE Trigger: CTCGCGTGAGGAGCTAAGGCGCAGCAGCTTCCTGCAGGCTGTGTCACAGTTGGAGGTAGAGCCTGACATCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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| CDS GCA 72 bp | CTTGTCCTCCTCGGAGAGCAGGAACCATACAAAGTCTaGGTAGCTCAGCTTCCCGACCTTTCGGGGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVLLGEQEPYKV*VAQLPDLSGQP Trigger: AGGCTGCCCCGAAAGGTCGGGAAGCTGAGCTACGCAGACTTTGTATGGTTCCTGCTCTCCGAGGAGGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189707.3 ENSMUST00000216394.2 |
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| CDS GCA 72 bp | CTTGTCCTCCTCGGAGAGCAGGAACCATACAAAGTCTaGGTAGCTCAGCTTCCCGACCTTTCGGGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LVLLGEQEPYKV*VAQLPDLSGQL Trigger: GAGCTGCCCCGAAAGGTCGGGAAGCTGAGCTACGCAGACTTTGTATGGTTCCTGCTCTCCGAGGAGGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239563.2 |
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| CDS CAA 72 bp | CAACGGAACCAGTACTCGGTGCTGGTGGGCGTAGTCTaGTCCTCCTCGGAGAGCAGGAACCATACAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QRNQYSVLVGVV*SSSESRNHTKS Trigger: AGACTTTGTATGGTTCCTGCTCTCCGAGGAGGACAAGACTACGCCCACCAGCACCGAGTACTGGTTCCGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000189707.3 ENSMUST00000216394.2 ENSMUST00000239563.2 |
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| CDS TCA 72 bp | GGTTTACTGTGTAGAAGATCCTCTGAATCACTGTGGTaGTGTAACGTGAGTGGAAGTCCTTCGCTGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GLLCRRSSESLW*CNVSGSPSLPS Trigger: TGAGGGCAGCGAAGGACTTCCACTCACGTTACATCACCACAGTGATTCAGAGGATCTTCTACACAGTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180233.4 ENSMUST00000239563.2 |
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