Pregenerated sensors for PPP2R3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021022Ensembl transcript IDs: ENSMUST00000021410.10
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGTGTATGCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATaGAGGCCTGAGCTTCCTGTGTTGACCTTTTTGCTGCTTGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: RVYAQTCDHSRRVAP*RPELPVLTFLLLVW Trigger: CCAAACAAGCAGCAAAAAGGTCAACACAGGAAGCTCAGGCCTGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGCATACACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 90 bp | CCAAAAACGATAGGCACAGAGGCACTCACCTTTAACCTCAGCACCTaGGAGGCAGAGGCAGGTGTCTCTCTTAAGAGTTCAAGGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: PKTIGTEALTFNLST*EAEAGVSLKSSRLK Trigger: CTTTAACCTTGAACTCTTAAGAGAGACACCTGCCTCTGCCTCCCAGGTGCTGAGGTTAAAGGTGAGTGCCTCTGTGCCTATCGTTTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR TCA 90 bp | TCCAGAACCCACGTGGGGAAAGGCAAGAATCACAACAATGTCTACTaGCCTCCATGTGTGCTCTGGTGTGCACACACAAGAAATACAAAA | + |
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Preference number: 1 (lower is better) Translates to: SRTHVGKGKNHNNVY*PPCVLWCAHTRNTK Trigger: TTTTGTATTTCTTGTGTGTGCACACCAGAGCACACATGGAGGTCAGTAGACATTGTTGTGATTCTTGCCTTTCCCCACGTGGGTTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 90 bp | AAGTACCATTACCTTTCCACCTTAAATGTGTATACAATGAAAACATaGGTGGGTGAACATTGTAGAGACCTGCCAGGGGACTTCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: KYHYLSTLNVYTMKT*VGEHCRDLPGDFTS Trigger: TGAGGTGAAGTCCCCTGGCAGGTCTCTACAATGTTCACCCACCCATGTTTTCATTGTATACACATTTAAGGTGGAAAGGTAATGGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR TCA 90 bp | CTCCTGTCCCCAATCTTCTTGAAGAACAAATATTGTAATTCCACATaGATAAACTCCACGGCTAACTACAGCAAATCTTACTTTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: LLSPIFLKNKYCNST*INSTANYSKSYFPF Trigger: AAATGGAAAGTAAGATTTGCTGTAGTTAGCCGTGGAGTTTATTCATGTGGAATTACAATATTTGTTCTTCAAGAAGATTGGGGACAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR GCA 90 bp | TCAAATTGTTCTGACTGCAACCAACACTCTAGTAAGCAAGATATTTaGTGTGTTGTACAGGCATGTGATGAGTTTTATTTAGAACGTTTC | + |
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Preference number: 1 (lower is better) Translates to: SNCSDCNQHSSKQDI*CVVQACDEFYLERF Trigger: GAAACGTTCTAAATAAAACTCATCACATGCCTGTACAACACAGCAAATATCTTGCTTACTAGAGTGTTGGTTGCAGTCAGAACAATTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGAGTGTATGCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATGCAAGCCATGTATGGCAATaGACATCTGTGCTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VSECMLRPVITAGGWHHASHVWQ*TSVLPA Trigger: TGCTGGGAGCACAGATGTGCATTGCCATACATGGCT...TGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGCATACACTCTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGAGTGTATGCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATGCACTGCTTCAACAGTGTTaGATGCAGCATTCAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: VSECMLRPVITAGGWHHALLQQC*MQHSSI Trigger: GATGCTTGAATGCTGCATGCAACACTGTTGAAGCAG...TGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGCATACACTCTGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 90 bp | AGGAGGGTGGCACCATGCAGGCCTGAGCTTCCTGTGTTGACCTTTTaGCTGCTTGTTTGGCACTGGCTGATGGGTACTGTTTACAATTAT | + |
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Preference number: 2 (lower is better) Translates to: RRVAPCRPELPVLTF*LLVWHWLMGTVYNY Trigger: ATAATTGTAAACAGTACCCATCAGCCAGTGCCAAACAAGCAGCAAAAAGGTCAACACAGGAAGCTCAGGCCTGCATGGTGCCACCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCTTACTAGGCTCCTCCTTTACAAAGGTATAGAATATGGAGCTACTTGTGAGGTGGGAGGAACATaGGCTGGAGGCTGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SLLTRLLLYKGIEYGATCEVGGT*AGGWPR Trigger: TCTGGGCCAGCCTCCAGCTCATGTTCCTCCCACCTC...ACAAGTAGCTCCATATTCTATACCTTTGTAAAGGAGGAGCCTAGTAAGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGAGTGTATGCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATGCAGCTTTGAATCAGAAATaGAATGGTGCTACTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: VSECMLRPVITAGGWHHAALNQK*NGATLM Trigger: CATCAGAGTAGCACCATTGCATTTCTGATTCAAAGC...TGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGCATACACTCTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | TTTATAAATACTGACCACAGCCATGTATGGCAATGCACATCTGTGCTCCCAGCAGGGAAGGCAAGAGGATaGTGGGTACAAGCGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: FINTDHSHVWQCTSVLPAGKARG*WVQALA Trigger: AGCAAGCGCTTGTACCCAGCATCCTCTTGCCTTCCC...TGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | CGGTATAAAGTACCCCTAGAGTTTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGGGTGGCACCATaGAGGCCTGAGCTTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RYKVPLEFTQGGFRMYNKRRVAP*RPELPV Trigger: CACAGGAAGCTCAGGCCTGCATGGTGCCACCCTCCT...TTTATTATACATTCTGAACCCTCCTTGTGTAAACTCTAGGGGTACTTTATACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR CCA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTTTTAACCTCAGCACCTaGGAGGCAGAGGCAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LHKEGSECIIKGARWKHCFNLST*EAEAGV Trigger: GACACCTGCCTCTGCCTCCCAGGTGCTGAGGTTAAA...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR CCA 90 bp | CGGTATAAAGTACCCCTAGAGTTTACACAAGGAGGGTTCAGAATGTATAATAAAGGGAGGAACATGAGCTaGAGGCTGGCCCAGACTACA | + |
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Preference number: 2 (lower is better) Translates to: RYKVPLEFTQGGFRMYNKGRNMS*RLAQTT Trigger: TGTAGTCTGGGCCAGCCTCCAGCTCATGTTCCTCCC...TTTATTATACATTCTGAACCCTCCTTGTGTAAACTCTAGGGGTACTTTATACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR TCA 90 bp | GAACTGACTTGCTCTGATCACAAACTGACACTAGTCACTGAATGGCTCTGTAGTCCACACCTAAAGCTTTaGATCAGAAATGCAATGGTG | + |
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Preference number: 2 (lower is better) Translates to: ELTCSDHKLTLVTEWLCSPHLKL*IRNAMV Trigger: CACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGG...ACTACAGAGCCATTCAGTGACTAGTGTCAGTTTGTGATCAGAGCAAGTCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR TCA 90 bp | GAACTGACTTGCTCTGATCACAAACTGACACTAGTCACTGAATGGCTCTGTAGTTTGTTTGGCACTGGCTaGTGGGTACTGTTTACAATT | + |
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Preference number: 2 (lower is better) Translates to: ELTCSDHKLTLVTEWLCSLFGTG*WVLFTI Trigger: AATTGTAAACAGTACCCATCAGCCAGTGCCAAACAA...ACTACAGAGCCATTCAGTGACTAGTGTCAGTTTGTGATCAGAGCAAGTCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 90 bp | CATCAATGTCACTATCAGTTACCGTTTACTAATACTCTGTCTCAGTaGGTAGTTGCTAAAACATGCTGGCCTGACCTCTTGCTCTTGATT | + |
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Preference number: 2 (lower is better) Translates to: HQCHYQLPFTNTLSQ*VVAKTCWPDLLLLI Trigger: AATCAAGAGCAAGAGGTCAGGCCAGCATGTTTTAGCAACTACCAACTGAGACAGAGTATTAGTAAACGGTAACTGATAGTGACATTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGATTTATCTTTCCATCAATGTCACTATCAGTTACCGTTTACTAATACTCTGACTGACCTCCATGTGTaGTCTGGTGTGCACACACAA | + |
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Preference number: 2 (lower is better) Translates to: RDLSFHQCHYQLPFTNTLTDLHV*SGVHTQ Trigger: TTGTGTGTGCACACCAGAGCACACATGGAGGTCAGT...CAGAGTATTAGTAAACGGTAACTGATAGTGACATTGATGGAAAGATAAATCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGACTTAGCCCTTAGGGATTTATCTTTCCATCAATGTCACTATCAGTTATATTGTAATTCCACATaGATAAACTCCACGGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TCDLALRDLSFHQCHYQLYCNST*INSTAN Trigger: GTTAGCCGTGGAGTTTATTCATGTGGAATTACAATA...TAACTGATAGTGACATTGATGGAAAGATAAATCCCTAAGGGCTAAGTCACATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR GCA 72 bp | GCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATaGAGGCCTGAGCTTCCTGTGTTGACCTTTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AQTCDHSRRVAP*RPELPVLTFLL Trigger: CAGCAAAAAGGTCAACACAGGAAGCTCAGGCCTGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 72 bp | TGGGAAGGCAAGAGGATGCTGGGTACAAGCGCTTGCTaGGAAGCCGAGAACCTGAATCTGATCTCCAGAACC | + |
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Preference number: 3 (lower is better) Translates to: WEGKRMLGTSAC*EAENLNLISRT Trigger: GGTTCTGGAGATCAGATTCAGGTTCTCGGCTTCCCAGCAAGCGCTTGTACCCAGCATCCTCTTGCCTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 72 bp | ATAGGCACAGAGGCACTCACCTTTAACCTCAGCACCTaGGAGGCAGAGGCAGGTGTCTCTCTTAAGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: IGTEALTFNLST*EAEAGVSLKSS Trigger: TGAACTCTTAAGAGAGACACCTGCCTCTGCCTCCCAGGTGCTGAGGTTAAAGGTGAGTGCCTCTGTGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 72 bp | AGCAGTAGTAAGTGGGACGCTGATGCGAACCAGGTTTaGCCATCTCTCTGCTTACTAGGCTCCTCCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: SSSKWDADANQV*PSLCLLGSSFT Trigger: TGTAAAGGAGGAGCCTAGTAAGCAGAGAGATGGCCAAACCTGGTTCGCATCAGCGTCCCACTTACTACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR TCA 72 bp | CACGTGGGGAAAGGCAAGAATCACAACAATGTCTACTaGCCTCCATGTGTGCTCTGGTGTGCACACACAAGA | + |
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Preference number: 3 (lower is better) Translates to: HVGKGKNHNNVY*PPCVLWCAHTR Trigger: TCTTGTGTGTGCACACCAGAGCACACATGGAGGTCAGTAGACATTGTTGTGATTCTTGCCTTTCCCCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR TCA 72 bp | CCTGGTCAACACAGTGAGCTCCAGCCTAGCACATGGTaGCACCTGGCCTTAAAACAACAACAGAAACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PGQHSELQPSTW*HLALKQQQKLK Trigger: CTTCAGTTTCTGTTGTTGTTTTAAGGCCAGGTGTCACCATGTGCTAGGCTGGAGCTCACTGTGTTGACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR GCA 72 bp | CTTTTTATAAATACTGACCACAGCCATGTATGGCAATaGACATCTGTGCTCCCAGCACTAGGGAGGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LFINTDHSHVWQ*TSVLPALGRLR Trigger: CCTCAGCCTCCCTAGTGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 72 bp | ACGTGTTGCTACCTAGGGATTACCCACGTGGCATCTTaGTCATGTCACAGTTATTCGGCCCTTTATGTAACA | + |
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Preference number: 3 (lower is better) Translates to: TCCYLGITHVAS*SCHSYSALYVT Trigger: TGTTACATAAAGGGCCGAATAACTGTGACATGACCAAGATGCCACGTGGGTAATCCCTAGGTAGCAACACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CCA 72 bp | ATCTCTCTTTTTATAAATACTGACCACAGCCATGTATaGCAATGCACATCTGTGCTCCCAGCACTAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISLFINTDHSHV*QCTSVLPALGR Trigger: CCTCCCTAGTGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAAAAGAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCTTACTAGGCTCCTCCTTTACAAAGGTATAGAATATGGAGCTACTTGTCCTGTGTTGACCTTTTaGCTGCTTGTTTGGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: SLLTRLLLYKGIEYGATCPVLTF*LLVWHW Trigger: CCAGTGCCAAACAAGCAGCAAAAAGGTCAACACAGG...ACAAGTAGCTCCATATTCTATACCTTTGTAAAGGAGGAGCCTAGTAAGCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR GCA 72 bp | GCAAGAATCACAACAATGTCTACTGACCTCCATGTGTaGTCTGGTGTGCACACACAAGAAATACAAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: ARITTMSTDLHV*SGVHTQEIQKQ Trigger: TTGTTTTTGTATTTCTTGTGTGTGCACACCAGAGCACACATGGAGGTCAGTAGACATTGTTGTGATTCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR GCA 72 bp | TTTAGAACGTTTCTAAGGATTCTGCTTCAACAGTGTTaGATGCAGCATTCAAGCATCTTTATGAAGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: FRTFLRILLQQC*MQHSSIFMKKS Trigger: AGACTTCTTCATAAAGATGCTTGAATGCTGCATGCAACACTGTTGAAGCAGAATCCTTAGAAACGTTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR-3UTR CAA 90 bp | ACATGTGACTTAGCCCTTAGGGATTTATCTTTCCATCAATGTCACTATCAGTTAGATTTGTTTTTAACTTaGAGTCAGTGCTACCACAGA | + |
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Preference number: 3 (lower is better) Translates to: TCDLALRDLSFHQCHYQLDLFLT*SQCYHR Trigger: TCTGTGGTAGCACTGACTCAAAGTTAAAAACAAATC...TAACTGATAGTGACATTGATGGAAAGATAAATCCCTAAGGGCTAAGTCACATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR TCA 72 bp | CCAATCTTCTTGAAGAACAAATATTGTAATTCCACATaGATAAACTCCACGGCTAACTACAGCAAATCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PIFLKNKYCNST*INSTANYSKSY Trigger: GTAAGATTTGCTGTAGTTAGCCGTGGAGTTTATTCATGTGGAATTACAATATTTGTTCTTCAAGAAGATTGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 72 bp | GCACCATGCAGGCCTGAGCTTCCTGTGTTGACCTTTTaGCTGCTTGTTTGGCACTGGCTGATGGGTACTGTT | + |
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Preference number: 4 (lower is better) Translates to: APCRPELPVLTF*LLVWHWLMGTV Trigger: AACAGTACCCATCAGCCAGTGCCAAACAAGCAGCAAAAAGGTCAACACAGGAAGCTCAGGCCTGCATGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 72 bp | GGTGTCTCTCTTAAGAGTTCAAGGTTAAAGGCCAACTaGGTCCACATAGCAAGTTCCAGGCCAGTCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVSLKSSRLKAN*VHIASSRPVRA Trigger: AGCCCTGACTGGCCTGGAACTTGCTATGTGGACCAAGTTGGCCTTTAACCTTGAACTCTTAAGAGAGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | CCTGAATCTGATCTCCAGAACCCACGTGGGGAAAGGCAAGAATCACAACAATGTGACATTGGTCATGGTTaGTGTTCCGTAACGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PESDLQNPRGERQESQQCDIGHG*CSVTGE Trigger: CTCTCCCGTTACGGAACAGCAACCATGACCAATGTC...ACATTGTTGTGATTCTTGCCTTTCCCCACGTGGGTTCTGGAGATCAGATTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | CGGTATAAAGTACCCCTAGAGTTTACACAAGGAGGGTTCAGAATGTATAATAAACAGCCCGTCCAGCTGTaGCAGCGTCGGGATCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RYKVPLEFTQGGFRMYNKQPVQL*QRRDQL Trigger: GAGCTGATCCCGACGCTGCCACAGCTGGACGGGCTG...TTTATTATACATTCTGAACCCTCCTTGTGTAAACTCTAGGGGTACTTTATACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTTATAAATACTGACCACAGCCATGTATGGCAATGCACATCTGTGCTCCCAGCATCATCCTTGACATCTTaGAATGACACAGGATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FINTDHSHVWQCTSVLPASSLTS*NDTGSC Trigger: ACAGGATCCTGTGTCATTTCAAGATGTCAAGGATGA...TGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | GCTGCTTGTTTGGCACTGGCTGATGGGTACTGTTTACAATTATTCACTGTGCCTGTGACTGTGTCTCCTTaGTTACTGTTGATTAAATCC | + |
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Preference number: 4 (lower is better) Translates to: AACLALADGYCLQLFTVPVTVSP*LLLIKS Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTCAC...AGGCACAGTGAATAATTGTAAACAGTACCCATCAGCCAGTGCCAAACAAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | CCTGAATCTGATCTCCAGAACCCACGTGGGGAAAGGCAAGAATCACAACAATGTACAGGATCCTGTCCATaGATTTTCATTAGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PESDLQNPRGERQESQQCTGSCP*IFISSC Trigger: ACAAGAACTAATGAAAATCCATGGACAGGATCCTGT...ACATTGTTGTGATTCTTGCCTTTCCCCACGTGGGTTCTGGAGATCAGATTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 72 bp | CCATGTCTCAAAACAACCAAAGCCACACCTAAAGCTTaGAATCAGAAATGCAATGGTGCTACTCTGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: PCLKTTKATPKA*NQKCNGATLMG Trigger: TCCCATCAGAGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTTGAGACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| 3UTR CAA 72 bp | CACTATCAGTTACCGTTTACTAATACTCTGTCTCAGTaGGTAGTTGCTAAAACATGCTGGCCTGACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HYQLPFTNTLSQ*VVAKTCWPDLL Trigger: CAAGAGGTCAGGCCAGCATGTTTTAGCAACTACCAACTGAGACAGAGTATTAGTAAACGGTAACTGATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TCTCTGCTTACTAGGCTCCTCCTTTACAAAGGTATAGAATATGGAGCTACTTGTCTTGACATCTTGAAATaGCACAGGATCCTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SLLTRLLLYKGIEYGATCLDILK*HRILSM Trigger: CATGGACAGGATCCTGTGTCATTTCAAGATGTCAAG...ACAAGTAGCTCCATATTCTATACCTTTGTAAAGGAGGAGCCTAGTAAGCAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | AAAACAACCAAAGCCACACCTAAAGCTTTGAATCAGAAATGCAATGGTGCTACTAGAAGACATTGGTCATaGTTGCTGTTCCGTAACGGG | + |
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Preference number: 4 (lower is better) Translates to: KTTKATPKALNQKCNGATRRHWS*LLFRNG Trigger: CCCGTTACGGAACAGCAACCATGACCAATGTCTTCT...AGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTTATAAATACTGACCACAGCCATGTATGGCAATGCACATCTGTGCTCCCAGCAGGAAATTCGTCCATATaGATCTGTATGAAGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FINTDHSHVWQCTSVLPAGNSSI*ICMKEF Trigger: AAACTCCTTCATACAGATTCATATGGACGAATTTCC...TGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTTCTAAGGATTCTGCTTCAACAGTGTTGCATGCAGCATTCAAGCATCTTTATGAGTCCTATTCTTGTCTaGTGCAGCCAAACTTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: FLRILLQQCCMQHSSIFMSPILV*CSQTFR Trigger: GCGAAAAGTTTGGCTGCATCAGACAAGAATAGGACT...CATAAAGATGCTTGAATGCTGCATGCAACACTGTTGAAGCAGAATCCTTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTTTTCTCCATCGTAAGTaGGACACTCCTGGAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: LHKEGSECIIKGARWKHCFLHRK*DTPGKL Trigger: GAGTTTTCCAGGAGTGTCTCACTTACGATGGAGAAA...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTTATAAATACTGACCACAGCCATGTATGGCAATGCACATCTGTGCTCCCAGCACTCCTTGATTACTGTTaGTTAAATCCTGAAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FINTDHSHVWQCTSVLPALLDYC*LNPEVR Trigger: TCTCACTTCAGGATTTAATCAACAGTAATCAAGGAG...TGCTGGGAGCACAGATGTGCATTGCCATACATGGCTGTGGTCAGTATTTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | GCTGCTTGTTTGGCACTGGCTGATGGGTACTGTTTACAATTATTCACTGTGCCTTTCATAATTGATCATTaGTTCCTCTCCAATCATAGG | + |
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Preference number: 4 (lower is better) Translates to: AACLALADGYCLQLFTVPFIIDH*FLSNHR Trigger: CCTATGATTGGAGAGGAAGCAATGATCAATTATGAA...AGGCACAGTGAATAATTGTAAACAGTACCCATCAGCCAGTGCCAAACAAGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | AAAACAACCAAAGCCACACCTAAAGCTTTGAATCAGAAATGCAATGGTGCTACTAATGTACTGCAGAGCTaGAGGCTCCTTTCTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KTTKATPKALNQKCNGATNVLQS*RLLSVF Trigger: GAAAACAGAAAGGAGCCTGCAGCTCTGCAGTACATT...AGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | GAACTGACTTGCTCTGATCACAAACTGACACTAGTCACTGAATGGCTCTGTAGTATCATAGGTGGTATCTaGTGTTTATCCAGCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: ELTCSDHKLTLVTEWLCSIIGGI*CLSSKN Trigger: GTTTTTGCTGGATAAACACCAGATACCACCTATGAT...ACTACAGAGCCATTCAGTGACTAGTGTCAGTTTGTGATCAGAGCAAGTCAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | TCTCTGCTTACTAGGCTCCTCCTTTACAAAGGTATAGAATATGGAGCTACTTGTCTCTCCAATCATAGGTaGTATCTGGTGTTTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLTRLLLYKGIEYGATCLSNHR*YLVFIQ Trigger: CTGGATAAACACCAGATACCACCTATGATTGGAGAG...ACAAGTAGCTCCATATTCTATACCTTTGTAAAGGAGGAGCCTAGTAAGCAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | AAAACAACCAAAGCCACACCTAAAGCTTTGAATCAGAAATGCAATGGTGCTACTGGTCTAAGAAGACATTaGTCATGGTTGCTGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KTTKATPKALNQKCNGATGLRRH*SWLLFR Trigger: ACGGAACAGCAACCATGACCAATGTCTTCTTAGACC...AGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TCTCTGCTTACTAGGCTCCTCCTTTACAAAGGTATAGAATATGGAGCTACTTGTCCATATGAATCTGTATaGAGGAGTTTGGCAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: SLLTRLLLYKGIEYGATCPYESV*RSLAKT Trigger: AGTCTTTGCCAAACTCCTTCATACAGATTCATATGG...ACAAGTAGCTCCATATTCTATACCTTTGTAAAGGAGGAGCCTAGTAAGCAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | ACCAATAGTTGGTCCTATTACTTTCAAATTGTTCTGACTGCAACCAACACTCTAAGAAGAAGAACTTCCTaGCTGCAGTGCAGACATAGA | + |
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Preference number: 4 (lower is better) Translates to: TNSWSYYFQIVLTATNTLRRRTS*LQCRHR Trigger: TCTATGTCTGCACTGCAGTCAGGAAGTTCTTCTTCT...TAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTATTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | GAACTGACTTGCTCTGATCACAAACTGACACTAGTCACTGAATGGCTCTGTAGTTATCTAAGAGTTCTCTaGTTTTCCTCTGTAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: ELTCSDHKLTLVTEWLCSYLRVL*FSSVER Trigger: TCTTTCTACAGAGGAAAAGCAGAGAACTCTTAGATA...ACTACAGAGCCATTCAGTGACTAGTGTCAGTTTGTGATCAGAGCAAGTCAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: LHKEGSECIIKGARWKHCKLLAL*SSLFTN Trigger: GTTGGTGAAAAGGCTGGACCAAAGTGCAAGCAATTT...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | ACCAATAGTTGGTCCTATTACTTTCAAATTGTTCTGACTGCAACCAACACTCTAAGTTTGAAAATGTACTaGAGAGCTGCAGGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TNSWSYYFQIVLTATNTLSLKMY*RAAGSF Trigger: AAAGGAGCCTGCAGCTCTGCAGTACATTTTCAAACT...TAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTATTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR GCA 90 bp | ACCAATAGTTGGTCCTATTACTTTCAAATTGTTCTGACTGCAACCAACACTCTAGTTCTCGTTGTCATTTaGAACAAGGGCTTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TNSWSYYFQIVLTATNTLVLVVI*NKGFSV Trigger: AACAGAGAAGCCCTTGTTGCAAATGACAACGAGAAC...TAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTATTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | ACCAATAGTTGGTCCTATTACTTTCAAATTGTTCTGACTGCAACCAACACTCTATCCCGAAGGTATCCTTaGCCAGCAACATCATATAAA | + |
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Preference number: 4 (lower is better) Translates to: TNSWSYYFQIVLTATNTLSRRYP*PATSYK Trigger: TTTATATGATGTTGCTGGCCAAGGATACCTTCGGGA...TAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTATTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | AAAACAACCAAAGCCACACCTAAAGCTTTGAATCAGAAATGCAATGGTGCTACTCAAAGATTTCATCCTTaGCATCTTGAAATGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTTKATPKALNQKCNGATQRFHP*HLEMTQ Trigger: CTGTGTCATTTCAAGATGTCAAGGATGAAATCTTTG...AGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR TCA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTAAGGATCCTTTGGTTTaGCCATGTCAAAGATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LHKEGSECIIKGARWKHCKDPLV*PCQRFH Trigger: ATGAAATCTTTGACATGGTCAAACCAAAGGATCCTT...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTTTTCAAAGGATCCTTTaGTTTGACCATGTCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LHKEGSECIIKGARWKHCFQRIL*FDHVKD Trigger: ATCTTTGACATGGTCAAACCAAAGGATCCTTTGAAA...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CCA 90 bp | AGGGATTTATCTTTCCATCAATGTCACTATCAGTTACCGTTTACTAATACTCTGAATAAAACCGGGGTATaGTCTTATAGAACTCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: RDLSFHQCHYQLPFTNTLNKTGV*SYRTRL Trigger: CAAACGAGTTCTATAAGACCATACCCCGGTTTTATT...CAGAGTATTAGTAAACGGTAACTGATAGTGACATTGATGGAAAGATAAATCCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | TCAGAGTGTATGCTCAGACCTGTGATCACAGCAGGAGGGTGGCACCATGCAGGCAGACATTGGTCATGGTaGCTGTTCCGTAACGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SECMLRPVITAGGWHHAGRHWSW*LFRNGR Trigger: TCTCCCGTTACGGAACAGCAACCATGACCAATGTCT...GCCTGCATGGTGCCACCCTCCTGCTGTGATCACAGGTCTGAGCATACACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | CCTGAATCTGATCTCCAGAACCCACGTGGGGAAAGGCAAGAATCACAACAATGTTCAATGTCCAGCAGTTaGAAAATGTACTGCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: PESDLQNPRGERQESQQCSMSSS*KMYCRA Trigger: AGCTCTGCAGTACATTTTCAAACTGCTGGACATTGA...ACATTGTTGTGATTCTTGCCTTTCCCCACGTGGGTTCTGGAGATCAGATTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | GCTGCTTGTTTGGCACTGGCTGATGGGTACTGTTTACAATTATTCACTGTGCCTAAAATTGCTTGCACTTaGGTCCAGCCTTTTCACCAA | + |
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Preference number: 5 (lower is better) Translates to: AACLALADGYCLQLFTVPKIACT*VQPFHQ Trigger: TTGGTGAAAAGGCTGGACCAAAGTGCAAGCAATTTT...AGGCACAGTGAATAATTGTAAACAGTACCCATCAGCCAGTGCCAAACAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS GCA 90 bp | TTCAGGTATCCCTTGTTCTCAATGTCCAGCAGTTTGAAAATGTACTaGAGAGCTGCAGGCTCCTTTCTGTTTTCTAAGGCAAGAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: FRYPLFSMSSSLKMY*RAAGSFLFSKARTK Trigger: CTTTGTTCTTGCCTTAGAAAACAGAAAGGAGCCTGCAGCTCTGCAGTACATTTTCAAACTGCTGGACATTGAGAACAAGGGATACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | AGGGATTTATCTTTCCATCAATGTCACTATCAGTTACCGTTTACTAATACTCTGCGGTCTAAGAAGACATaGGTCATGGTTGCTGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: RDLSFHQCHYQLPFTNTLRSKKT*VMVAVP Trigger: CGGAACAGCAACCATGACCAATGTCTTCTTAGACCG...CAGAGTATTAGTAAACGGTAACTGATAGTGACATTGATGGAAAGATAAATCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | ACCAATAGTTGGTCCTATTACTTTCAAATTGTTCTGACTGCAACCAACACTCTATCTGCAGAGTTCTCGTaGTCATTTGCAACAAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TNSWSYYFQIVLTATNTLSAEFS*SFATRA Trigger: AGCCCTTGTTGCAAATGACAACGAGAACTCTGCAGA...TAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTATTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | TTACACAAGGAGGGTTCAGAATGTATAATAAAAGGAGCAAGATGGAAGCACTGTGCATGCCAAAATATCTaGAATTTTGATCTTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHKEGSECIIKGARWKHCACQNI*NFDLPC Trigger: ACAGGGAAGATCAAAATTCAAGATATTTTGGCATGC...ACAGTGCTTCCATCTTGCTCCTTTTATTATACATTCTGAACCCTCCTTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS-3UTR CAA 90 bp | AAAACAACCAAAGCCACACCTAAAGCTTTGAATCAGAAATGCAATGGTGCTACTAAAGGATCCTTTGGTTaGACCATGTCAAAGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTTKATPKALNQKCNGATKGSFG*TMSKIS Trigger: TGAAATCTTTGACATGGTCAAACCAAAGGATCCTTT...AGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS CCA 72 bp | GAAGGAGTAGAAGGACTTCTCCAGCCCGTCCAGCTGTaGCAGCGTCGGGATCAGCTCCAGGATGTAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: EGVEGLLQPVQL*QRRDQLQDVVL Trigger: GAGAACTACATCCTGGAGCTGATCCCGACGCTGCCACAGCTGGACGGGCTGGAGAAGTCCTTCTACTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS TCA 72 bp | CGTCGGGATCAGCTCCAGGATGTAGTTCTCCAGGTCTaGTTCCCGAAGGTATCCTTGGCCAGCAACATCATA | + |
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Preference number: 6 (lower is better) Translates to: RRDQLQDVVLQV*FPKVSLASNII Trigger: TATGATGTTGCTGGCCAAGGATACCTTCGGGAATCAGACCTGGAGAACTACATCCTGGAGCTGATCCCGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS CCA 72 bp | ACTCCTGGAAAACTCGGTCTAAGAAGACATTGGTCATaGTTGCTGTTCCGTAACGGGAGAGCTCCTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: TPGKLGLRRHWS*LLFRNGRAPLY Trigger: GTAAAGAGGAGCTCTCCCGTTACGGAACAGCAACCATGACCAATGTCTTCTTAGACCGAGTTTTCCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS CAA 72 bp | CCTGGAAAACTCGGTCTAAGAAGACATTGGTCATGGTaGCTGTTCCGTAACGGGAGAGCTCCTCTTTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: PGKLGLRRHWSW*LFRNGRAPLYL Trigger: TAAGTAAAGAGGAGCTCTCCCGTTACGGAACAGCAACCATGACCAATGTCTTCTTAGACCGAGTTTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS TCA 72 bp | CATTCAGGTATCCCTTGTTCTCAATGTCCAGCAGTTTaGAAATGTACTGCAGAGCTGCAGGCTCCTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSGIPCSQCPAV*KCTAELQAPFC Trigger: ACAGAAAGGAGCCTGCAGCTCTGCAGTACATTTTCAAACTGCTGGACATTGAGAACAAGGGATACCTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS GCA 72 bp | TGTGTCATCAAGATCTGCAGAGTTCTCGTTGTCATTTaGAACAAGGGCTTCTCTGTTCTCGTAGGTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CVIKICRVLVVI*NKGFSVLVGPE Trigger: TTCTGGACCTACGAGAACAGAGAAGCCCTTGTTGCAAATGACAACGAGAACTCTGCAGATCTTGATGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS CAA 72 bp | ATGTGTCATCAAGATCTGCAGAGTTCTCGTTGTCATTaGCAACAAGGGCTTCTCTGTTCTCGTAGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MCHQDLQSSRCH*QQGLLCSRRSR Trigger: TCTGGACCTACGAGAACAGAGAAGCCCTTGTTGCAAATGACAACGAGAACTCTGCAGATCTTGATGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS TCA 72 bp | CCAGGTAGGTCTTATAGTCCATTTCTCCATCGTAAGTaGGACACTCCTGGAAAACTCGGTCTAAGAAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSYSPFLHRK*DTPGKLGLRRH Trigger: ATGTCTTCTTAGACCGAGTTTTCCAGGAGTGTCTCACTTACGATGGAGAAATGGACTATAAGACCTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS CCA 72 bp | TTGATCATTGCTTCCTCTCCAATCATAGGTGGTATCTaGTGTTTATCCAGCAAAAACCATAAGTTCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LIIASSPIIGGI*CLSSKNHKFCN Trigger: GTTGCAGAACTTATGGTTTTTGCTGGATAAACACCAGATACCACCTATGATTGGAGAGGAAGCAATGATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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| CDS TCA 72 bp | GTAGTTAAAGAACTGCATGATGGAAATTCGTCCATATaGATCTGTATGAAGGAGTTTGGCAAAGACTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VVKELHDGNSSI*ICMKEFGKDFC Trigger: GCAAAAGTCTTTGCCAAACTCCTTCATACAGATTCATATGGACGAATTTCCATCATGCAGTTCTTTAACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021410.10 |
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