Pregenerated sensors for PPP2R2D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041769Ensembl transcript IDs: ENSMUST00000041097.13, ENSMUST00000136824.8, ENSMUST00000148453.8, ENSMUST00000155672.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTaGCCACACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: DAAHWGSRAREERGW*PHHVQDKAQGWMAE Trigger: CTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTGTGGCCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR CCA 90 bp | GGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTaGTGGCCACACCATGTCCAGGATAAGGCCCAGGGATGGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: GDAAHWGSRAREERG*WPHHVQDKAQGWMA Trigger: TGCCATCCATCCCTGGGCCTTATCCTGGACATGGTGTGGCCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAGGCCCAGGGATGGATaGCAGAGACAGAGGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TMHQRRVMQPTGAPGPERRPRDG*QRQREE Trigger: CTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCT...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGATAAGGCCCAGGGATaGATGGCAGAGACAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RRVMQPTGAPGPERNVGGDKAQG*MAETEG Trigger: TCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATC...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTAGTAATGGCCTTTATTaGGCAGAGTCCACCAATTCA | + |
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Preference number: 2 (lower is better) Translates to: RRVMQPTGAPGPERNVGGSNGLY*AESTNS Trigger: TGAATTGGTGGACTCTGCTCAATAAAGGCCATTACT...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR TCA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTGACAGGAAAACTAATTaGCCGGCGTACATATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HHVQDKAQGWMAETEGRADRKTN*PAYICK Trigger: CTTGCATATGTACGCCGGTCAATTAGTTTTCCTGTC...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTAAGTAGCTCCACAGAAGATGTGACGGCAGTGCAGTGGGTGAGTAGAGGCCAGAGAGGAACGTaGGTGGTGGCCACACCATGT | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSTEDVTAVQWVSRGQRGT*VVATPC Trigger: ACATGGTGTGGCCACCACCCACGTTCCTCTCTGGCC...TCTACTCACCCACTGCACTGCCGTCACATCTTCTGTGGAGCTACTTAATAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTAGAGTGAGCGCGGCCTTTATTCTCTTGTTCCCGCTGGAAAATAACAACTTTCACAGGCCAAGATaGCCTGTTCCGGTCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SPRVSAAFILLFPLENNNFHRPR*PVPVLS Trigger: GGACAAGACCGGAACAGGTCATCTTGGCCTGTGAAA...GTTGTTATTTTCCAGCGGGAACAAGAGAATAAAGGCCGCGCTCACTCTAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTAGAGTGAGCGCGGCCTTTATTCTCTTGTTCCCGCTGGAAAATAACAACCGGCTCTGCAACTTTTaGAGAGCAGTTTCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SPRVSAAFILLFPLENNNRLCNF*RAVSQA Trigger: GGCCTGTGAAACTGCTCTCCAAAAGTTGCAGAGCCG...GTTGTTATTTTCCAGCGGGAACAAGAGAATAAAGGCCGCGCTCACTCTAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| 3UTR-3UTR CCA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTTTTTGGTCTATAAACTaGAAAGGAAGGCTCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: HHVQDKAQGWMAETEGRAFWSIN*KGRLRL Trigger: AAGTCTGAGCCTTCCTTTCCAGTTTATAGACCAAAA...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR TCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCGACAGGAAAACTAATTaGCCGGCGTACATATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VSIREVEVRHYSQWRGQCDRKTN*PAYICK Trigger: CTTGCATATGTACGCCGGTCAATTAGTTTTCCTGTC...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATTAAGTAGCTCCACAGAAGATGTGACGGCAGTGCAGTGGGTGAGTAGAAGTAATGGCCTTTATTaGGCAGAGTCCACCAATTCA | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSTEDVTAVQWVSRSNGLY*AESTNS Trigger: TGAATTGGTGGACTCTGCTCAATAAAGGCCATTACT...TCTACTCACCCACTGCACTGCCGTCACATCTTCTGTGGAGCTACTTAATAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR TCA 72 bp | TGCTCGGGCACCCACGCACCATGCACCAGCGGAGGGTaGTGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: CSGTHAPCTSGG*CSPLGLQGQRG Trigger: TCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGTGCGTGGGTGCCCGAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTTATGCAAGACAACACTaGGTCCTCCAGTCAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: RRVMQPTGAPGPERNVGGYARQH*VLQSVF Trigger: GAAAACTGACTGGAGGACCAAGTGTTGTCTTGCATA...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAGGACAATGCCTTTTTaGACAGGAAAACTAATTGAC | + |
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Preference number: 3 (lower is better) Translates to: TMHQRRVMQPTGAPGPERRTMPF*TGKLID Trigger: GTCAATTAGTTTTCCTGTCAAAAAAGGCATTGTCCT...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR TCA 72 bp | TCTGCAACTTTTGGAGAGCAGTTTCACAGGCCAAGATaGCCTGTTCCGGTCTTGTCCCTGGGACCACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SATFGEQFHRPR*PVPVLSLGPQA Trigger: GGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCATCTTGGCCTGTGAAACTGCTCTCCAAAAGTTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| 3UTR-3UTR CAA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTTATGCAAGACAACACTaGGTCCTCCAGTCAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: HHVQDKAQGWMAETEGRAYARQH*VLQSVF Trigger: GAAAACTGACTGGAGGACCAAGTGTTGTCTTGCATA...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTAGGACAATGCCTTTTTaGACAGGAAAACTAATTGAC | + |
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Preference number: 3 (lower is better) Translates to: SLQQRHSSLPTPAESPSSRTMPF*TGKLID Trigger: GTCAATTAGTTTTCCTGTCAAAAAAGGCATTGTCCT...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGACCACTGGAAGTCGTTaGCGCCCGCCGGGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TMHQRRVMQPTGAPGPERTTGSR*RPPGSR Trigger: GCGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGT...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTTACTCATGTACCTGGTaGGTCTCCACAGGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RRVMQPTGAPGPERNVGGYSCTW*VSTGLP Trigger: GGGCAGGCCTGTGGAGACCCACCAGGTACATGAGTA...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAGGTACTCATGTACCTaGTGGGTCTCCACAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TMHQRRVMQPTGAPGPERRYSCT*WVSTGL Trigger: CAGGCCTGTGGAGACCCACCAGGTACATGAGTACCT...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | ATGACCTGTTCCGGTCTTGTCCCTGGGACCACAGGCCTCCAGATGTTCTCAATGACCACTGGAAGTCGTTaGCGCCCGCCGGGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: MTCSGLVPGTTGLQMFSMTTGSR*RPPGSR Trigger: GCGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGT...CATTGAGAACATCTGGAGGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGGACAAATACATTGCACTaGTGTGGGTGGAACTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: EGDAAHWGSRAREERGWWTNTLH*CGWNSA Trigger: CGCAGAGTTCCACCCACATCAGTGCAATGTATTTGT...CCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTGCCTGCCCTCCATGTTaGGGTCCCAGACCTTCACCG | + |
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Preference number: 4 (lower is better) Translates to: SLQQRHSSLPTPAESPSSACPPC*GPRPSP Trigger: CGGTGAAGGTCTGGGACCTCAACATGGAGGGCAGGC...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTGCATGTCACACAGCCTaGTGGTGCCCTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLQQRHSSLPTPAESPSSACHTA*WCPCCC Trigger: GCAGCAGCAAGGGCACCATCAGGCTGTGTGACATGC...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAGAAGGATCTACTGCTaGGATCTTCTGGCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TMHQRRVMQPTGAPGPERRRIYC*DLLALQ Trigger: TTGAAGAGCCAGAAGATCCCAGCAGTAGATCCTTCT...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR TCA 90 bp | AAGATGACCTGTTCCGGTCTTGTCCCTGGGACCACAGGCCTCCAGATGTTCTCAGCAGGACAGGACATCTaGGGAGCGCCTGCTAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KMTCSGLVPGTTGLQMFSAGQDI*GAPASE Trigger: CTCACTAGCAGGCGCTCCTCAGATGTCCTGTCCTGC...TGAGAACATCTGGAGGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR GCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTAATTCGTCGTGGACTTaGTTCTACCATAAGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RRVMQPTGAPGPERNVGGNSSWT*FYHKVH Trigger: ATGGACCTTATGGTAGAAGCAAGTCCACGACGAATT...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | GAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGGCGAACTTGTCAAAGATaGAGTCGTTCTCATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: EGDAAHWGSRAREERGWWRTCQR*SRSHTR Trigger: CCTTGTATGAGAACGACTGCATCTTTGACAAGTTCG...CCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTACTCATGTACCTGGTaGGTCTCCACAGGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYYSCTW*VSTGLP Trigger: GGGCAGGCCTGTGGAGACCCACCAGGTACATGAGTA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTTGTAAACAAATACATTaGACTGATGTGGGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: RRVMQPTGAPGPERNVGGCKQIH*TDVGGT Trigger: AGTTCCACCCACATCAGTGCAATGTATTTGTTTACA...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATAGGTACTCATGTACCTaGTGGGTCTCCACAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYRYSCT*WVSTGL Trigger: CAGGCCTGTGGAGACCCACCAGGTACATGAGTACCT...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR TCA 90 bp | TCCCCTAGAGTGAGCGCGGCCTTTATTCTCTTGTTCCCGCTGGAAAATAACAACGGAGTGTGGGTGGAGTaGACAGACGTCTTCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPRVSAAFILLFPLENNNGVWVE*TDVFRH Trigger: GTGGCGGAAGACGTCTGTTCACTCCACCCACACTCC...GTTGTTATTTTCCAGCGGGAACAAGAGAATAAAGGCCGCGCTCACTCTAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR GCA 90 bp | ACCATAAGGTCCATGGGCTTCAATATTGGAACCCGTAGTGCCGTAATTCTAAATACCACTGGAAGTCGTTaGCGCCCGCCGGGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TIRSMGFNIGTRSAVILNTTGSR*RPPGSR Trigger: GCGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGT...ATTTAGAATTACGGCACTACGGGTTCCAATATTGAAGCCCATGGACCTTATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136824.8 |
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| CDS-3UTR GCA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTATATGTATGAGCATTTaGAAAAATTCGTCGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: RRVMQPTGAPGPERNVGGICMSI*KNSSWT Trigger: AGTCCACGACGAATTTTTGCAAATGCTCATACATAT...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTATGTGGGTGGAACTCTaGGGCAGTGATGACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLQQRHSSLPTPAESPSSMWVEL*GSDDFC Trigger: ACAGAAGTCATCACTGCCGCAGAGTTCCACCCACAT...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTATGTGGGTGGAACTCTaGGGCAGTGATGACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: HHVQDKAQGWMAETEGRAMWVEL*GSDDFC Trigger: ACAGAAGTCATCACTGCCGCAGAGTTCCACCCACAT...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | ATGACCTGTTCCGGTCTTGTCCCTGGGACCACAGGCCTCCAGATGTTCTCAATGAGTGAGGAGTGTGGGTaGAGTGAACAGACGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: MTCSGLVPGTTGLQMFSMSEECG*SEQTSS Trigger: GGAAGACGTCTGTTCACTCCACCCACACTCCTCACT...CATTGAGAACATCTGGAGGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR TCA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTACAAATACATTGCACTaGTGTGGGTGGAACTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: HHVQDKAQGWMAETEGRATNTLH*CGWNSA Trigger: CGCAGAGTTCCACCCACATCAGTGCAATGTATTTGT...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | ATGACCTGTTCCGGTCTTGTCCCTGGGACCACAGGCCTCCAGATGTTCTCAATGCCAGAAGAGACAGGGTaGAGGAGCAAACAAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: MTCSGLVPGTTGLQMFSMPEETG*RSKQEA Trigger: TGCTTCTTGTTTGCTCCTCCACCCTGTCTCTTCTGG...CATTGAGAACATCTGGAGGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR TCA 90 bp | TGTTTATTAAGTAGCTCCACAGAAGATGTGACGGCAGTGCAGTGGGTGAGTAGAGCATGTCACACAGCCTaGTGGTGCCCTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLLSSSTEDVTAVQWVSRACHTA*WCPCCC Trigger: GCAGCAGCAAGGGCACCATCAGGCTGTGTGACATGC...TCTACTCACCCACTGCACTGCCGTCACATCTTCTGTGGAGCTACTTAATAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATACAAGGAGCAGAGCTTaGTTCGCAGGTACTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYTRSRA*FAGTHV Trigger: TACATGAGTACCTGCGAAGCAAGCTCTGCTCCTTGT...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTAGAAGGATCTACTGCTaGGATCTTCTGGCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: HHVQDKAQGWMAETEGRARRIYC*DLLALQ Trigger: TTGAAGAGCCAGAAGATCCCAGCAGTAGATCCTTCT...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATACCTTTGTCTCCTGTTaGAAGAAGGTCTCCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYTFVSC*KKVSRV Trigger: TACTCTGGAGACCTTCTTGCAACAGGAGACAAAGGT...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR GCA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTAATTCGTCGTGGACTTaGTTCTACCATAAGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLQQRHSSLPTPAESPSSNSSWT*FYHKVH Trigger: ATGGACCTTATGGTAGAAGCAAGTCCACGACGAATT...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTGGTGCCCTTGCTGCTaGTGTAAACAAATACATTGC | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYWCPCC*CKQIHC Trigger: GCAATGTATTTGTTTACAGCAGCAGCAAGGGCACCA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTATGTATCGACCACTGTaGCTGAACTTGACATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLQQRHSSLPTPAESPSSMYRPL*LNLTSD Trigger: ATCTGATGTCAAGTTCAGCCACAGTGGTCGATACAT...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTTCTCTTGTTCCCGCTaGAAAATAACAACTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYFSCSR*KITTLP Trigger: TGGCAGAGTTGTTATTTTCCAGCGGGAACAAGAGAA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATATGTATCGACCACTGTaGCTGAACTTGACATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYMYRPL*LNLTSD Trigger: ATCTGATGTCAAGTTCAGCCACAGTGGTCGATACAT...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTGCAAAAATTCGTCGTaGACTTGCTTCTACCATAAG | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYCKNSS*TCFYHK Trigger: CTTATGGTAGAAGCAAGTCCACGACGAATTTTTGCA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTGTAAACAAATACATTaGACTGATGTGGGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: SSGTHLFRLQLRALLLLYCKQIH*TDVGGT Trigger: AGTTCCACCCACATCAGTGCAATGTATTTGTTTACA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCACAAGGAGCAGAGCTTaGTTCGCAGGTACTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: VSIREVEVRHYSQWRGQCTRSRA*FAGTHV Trigger: TACATGAGTACCTGCGAAGCAAGCTCTGCTCCTTGT...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCTGGTGCCCTTGCTGCTaGTGTAAACAAATACATTGC | + |
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Preference number: 4 (lower is better) Translates to: VSIREVEVRHYSQWRGQCWCPCC*CKQIHC Trigger: GCAATGTATTTGTTTACAGCAGCAGCAAGGGCACCA...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| 3UTR CAA 72 bp | GCGCCACTATTCTCAATGGAGAGGACAATGCCTTTTTaGACAGGAAAACTAATTGACCGGCGTACATATGCA | + |
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Preference number: 4 (lower is better) Translates to: APLFSMERTMPF*TGKLIDRRTYA Trigger: TGCATATGTACGCCGGTCAATTAGTTTTCCTGTCAAAAAAGGCATTGTCCTCTCCATTGAGAATAGTGGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | ACCATAAGGTCCATGGGCTTCAATATTGGAACCCGTAGTGCCGTAATTCTAAATACCTTTGTCTCCTGTTaGAAGAAGGTCTCCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: TIRSMGFNIGTRSAVILNTFVSC*KKVSRV Trigger: TACTCTGGAGACCTTCTTGCAACAGGAGACAAAGGT...ATTTAGAATTACGGCACTACGGGTTCCAATATTGAAGCCCATGGACCTTATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136824.8 |
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| CDS-3UTR GCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCCGAACTTGTCAAAGATaGAGTCGTTCTCATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: VSIREVEVRHYSQWRGQCRTCQR*SRSHTR Trigger: CCTTGTATGAGAACGACTGCATCTTTGACAAGTTCG...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | TGTTTATTAAGTAGCTCCACAGAAGATGTGACGGCAGTGCAGTGGGTGAGTAGACAAGTTATAACCTTCTaGTCTTTTATCCCGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: CLLSSSTEDVTAVQWVSRQVITF*SFIPFT Trigger: AGTGAACGGGATAAAAGAGCAGAAGGTTATAACTTG...TCTACTCACCCACTGCACTGCCGTCACATCTTCTGTGGAGCTACTTAATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCTGCAAAAATTCGTCGTaGACTTGCTTCTACCATAAG | + |
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Preference number: 4 (lower is better) Translates to: VSIREVEVRHYSQWRGQCCKNSS*TCFYHK Trigger: CTTATGGTAGAAGCAAGTCCACGACGAATTTTTGCA...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR GCA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCATATGTATGAGCATTTaGAAAAATTCGTCGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: VSIREVEVRHYSQWRGQCICMSI*KNSSWT Trigger: AGTCCACGACGAATTTTTGCAAATGCTCATACATAT...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | GGCCAAGATGACCTGTTCCGGTCTTGTCCCTGGGACCACAGGCCTCCAGATGTTCACCACTGGAAGTCGTaGCCGCCCGCCGGGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GQDDLFRSCPWDHRPPDVHHWKS*PPAGQP Trigger: CGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGTG...AACATCTGGAGGCCTGTGGTCCCAGGGACAAGACCGGAACAGGTCATCTTGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148453.8 |
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| CDS-3UTR CAA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTCACCACTGGAAGTCGTaGCCGCCCGCCGGGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: HHVQDKAQGWMAETEGRAHHWKS*PPAGQP Trigger: CGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGTG...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CAA 90 bp | GAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGGTACAAGGAGCAGAGCTaGCTTCGCAGGTACTCATGT | + |
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Preference number: 5 (lower is better) Translates to: EGDAAHWGSRAREERGWWYKEQS*LRRYSC Trigger: ACATGAGTACCTGCGAAGCAAGCTCTGCTCCTTGTA...CCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGGGCGGCCTTTATTCTCTaGTTCCCGCTGGAAAATAAC | + |
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Preference number: 5 (lower is better) Translates to: EGDAAHWGSRAREERGWWAAFIL*FPLENN Trigger: GTTATTTTCCAGCGGGAACAAGAGAATAAAGGCCGC...CCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CAA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTGGCCTGCCCTCCATGTaGAGGTCCCAGACCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: SLQQRHSSLPTPAESPSSGLPSM*RSQTFT Trigger: GGTGAAGGTCTGGGACCTCAACATGGAGGGCAGGCC...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | ACCATGCACCAGCGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGCCACTGTGGCTGAACTaGACATCAGATATAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: TMHQRRVMQPTGAPGPERPLWLN*TSDIDE Trigger: CTCATCTATATCTGATGTCAAGTTCAGCCACAGTGG...CCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCGCTGGTGCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | CGGAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTTCCATATTAGCTGGCTaGATGTCCACAATGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RRVMQPTGAPGPERNVGGSILAG*MSTMLK Trigger: CTTCAACATTGTGGACATCAAGCCAGCTAATATGGA...ACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | ACCATAAGGTCCATGGGCTTCAATATTGGAACCCGTAGTGCCGTAATTCTAAATCACCACTGGAAGTCGTaGCCGCCCGCCGGGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TIRSMGFNIGTRSAVILNHHWKS*PPAGQP Trigger: CGGCTGCCCGGCGGGCGGCAACGACTTCCAGTGGTG...ATTTAGAATTACGGCACTACGGGTTCCAATATTGAAGCCCATGGACCTTATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136824.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTGATGCAGCCCACTGGGGCTCCAGGGCCAGAGAGGAACGTGGGTGGTGGTTGATGTCCACAATGTaGAAGCTTCTATCTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: EGDAAHWGSRAREERGWWLMSTM*KLLSVI Trigger: AATCACAGATAGAAGCTTCAACATTGTGGACATCAA...CCACCACCCACGTTCCTCTCTGGCCCTGGAGCCCCAGTGGGCTGCATCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | TCCCTTCAGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCACCTTTGTCTCCTGTaGCAAGAAGGTCTCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLQQRHSSLPTPAESPSSHLCLL*QEGLQS Trigger: ACTCTGGAGACCTTCTTGCAACAGGAGACAAAGGTG...AGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCTGAAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041097.13 |
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| CDS-3UTR CAA 90 bp | CACCATGTCCAGGATAAGGCCCAGGGATGGATGGCAGAGACAGAGGGAAGAGCTTACAAGGAGCAGAGCTaGCTTCGCAGGTACTCATGT | + |
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Preference number: 5 (lower is better) Translates to: HHVQDKAQGWMAETEGRAYKEQS*LRRYSC Trigger: ACATGAGTACCTGCGAAGCAAGCTCTGCTCCTTGTA...AGCTCTTCCCTCTGTCTCTGCCATCCATCCCTGGGCCTTATCCTGGACATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATCAGCAGCACTCGAACTaGTCAAAGATGCAGTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSGTHLFRLQLRALLLLYQQHSN*SKMQSF Trigger: GAACGACTGCATCTTTGACAAGTTCGAGTGCTGCTG...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS TCA 90 bp | TACTTTCCGGGGCTTCAGGCTGGCTCGGGGTTTGCTGTTCTCTCTTaGGGCTTCCAGTGTAACATCCCTCCGAGTGTTTCTATCAAACAT | + |
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Preference number: 5 (lower is better) Translates to: YFPGLQAGSGFAVLS*GFQCNIPPSVSIKH Trigger: ATGTTTGATAGAAACACTCGGAGGGATGTTACACTGGAAGCCTCAAGAGAGAACAGCAAACCCCGAGCCAGCCTGAAGCCCCGGAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCGGCACTCATCTCTTCCGACTCCAGCTGAGAGCCCTTCTTCTCCTGTATTCCATATTAGCTGGCTaGATGTCCACAATGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSGTHLFRLQLRALLLLYSILAG*MSTMLK Trigger: CTTCAACATTGTGGACATCAAGCCAGCTAATATGGA...ATACAGGAGAAGAAGGGCTCTCAGCTGGAGTCGGAAGAGATGAGTGCCGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCCAGCAGCACTCGAACTaGTCAAAGATGCAGTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: VSIREVEVRHYSQWRGQCQQHSN*SKMQSF Trigger: GAACGACTGCATCTTTGACAAGTTCGAGTGCTGCTG...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS-3UTR CAA 90 bp | ACCATAAGGTCCATGGGCTTCAATATTGGAACCCGTAGTGCCGTAATTCTAAATCACCTTTGTCTCCTGTaGCAAGAAGGTCTCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: TIRSMGFNIGTRSAVILNHLCLL*QEGLQS Trigger: ACTCTGGAGACCTTCTTGCAACAGGAGACAAAGGTG...ATTTAGAATTACGGCACTACGGGTTCCAATATTGAAGCCCATGGACCTTATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136824.8 |
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| CDS-3UTR CAA 90 bp | GTATCTATTAGGGAAGTAGAAGTGCGCCACTATTCTCAATGGAGAGGACAATGCCCACTGTGGCTGAACTaGACATCAGATATAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: VSIREVEVRHYSQWRGQCPLWLN*TSDIDE Trigger: CTCATCTATATCTGATGTCAAGTTCAGCCACAGTGG...GCATTGTCCTCTCCATTGAGAATAGTGGCGCACTTCTACTTCCCTAATAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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| CDS TCA 72 bp | GGGCTTCAGGCTGGCTCGGGGTTTGCTGTTCTCTCTTaGGGCTTCCAGTGTAACATCCCTCCGAGTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GLQAGSGFAVLS*GFQCNIPPSVS Trigger: AGAAACACTCGGAGGGATGTTACACTGGAAGCCTCAAGAGAGAACAGCAAACCCCGAGCCAGCCTGAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041097.13 ENSMUST00000155672.8 |
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