Pregenerated sensors for PPP2R2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029120Ensembl transcript IDs: ENSMUST00000031003.11, ENSMUST00000201156.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGCCACAGCCACACAGGGTCCCCAGTCCTGCTTCTCAGGACTTaGCTTAGCCTGGAAAAACCCACCCGAGGGACCCGGCCCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: EGHSHTGSPVLLLRT*LSLEKPTRGTRPCL Trigger: GAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTCCAGGCTAAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTGTGTGGCTGTGGCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | GCCACACAGGGTCCCCAGTCCTGCTTCTCAGGACTTGCCTTAGCCTaGAAAAACCCACCCGAGGGACCCGGCCCTGCCTCACGATTAACC | + |
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Preference number: 1 (lower is better) Translates to: ATQGPQSCFSGLALA*KNPPEGPGPASRLT Trigger: GGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTCCAGGCTAAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTGTGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | TGTGTGGCGGGTTGGAAATGGGACACCAGCTCAGCCCTCGGGGTATaGCTCCCTAGGCACCCCACTTCTCTGCTCAGAGCCTTGGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CVAGWKWDTSSALGV*LPRHPTSLLRALVP Trigger: GGGAACCAAGGCTCTGAGCAGAGAAGTGGGGTGCCTAGGGAGTCATACCCCGAGGGCTGAGCTGGTGTCCCATTTCCAACCCGCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | GGCTGCCTGGCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTaGGGAGAAAGCTGCAGGTACAGTGTCGGTGACGTGCATCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: GCLAACNLLGEQPEG*GESCRYSVGDVHLE Trigger: CTCAAGATGCACGTCACCGACACTGTACCTGCAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | AAAGCCATCACAAAGTGGGCTGCGGGGATCCAGCCACAGCCACCATaGGCTGAGCACCATGTCCAGCGTGCAGTGGGCTCACAAACGGAC | + |
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Preference number: 1 (lower is better) Translates to: KAITKWAAGIQPQPP*AEHHVQRAVGSQTD Trigger: GTCCGTTTGTGAGCCCACTGCACGCTGGACATGGTGCTCAGCCCATGGTGGCTGTGGCTGGATCCCCGCAGCCCACTTTGTGATGGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | GGGACAGGACCGGCTGTCGGCCATGGGGAAGATGACTGGCTAGCATaGAAGGGTGACAGCAAAGCCATCACAAAGTGGGCTGCGGGGATC | + |
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Preference number: 1 (lower is better) Translates to: GTGPAVGHGEDDWLA*KGDSKAITKWAAGI Trigger: GATCCCCGCAGCCCACTTTGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCCGACAGCCGGTCCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | CTGAGAAAACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTaGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGCAGGTACAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LRKRPLGLPGCMQPP*GAAGRVRRKLQVQC Trigger: ACACTGTACCTGCAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGTTTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | TCAGCTGGGAGTTATGGAAATGAGCGGACACCTGTCTCGTGGGCATaGGGATTCTACAGTCAGGGACAGGACCGGCTGTCGGCCATGGGG | + |
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Preference number: 1 (lower is better) Translates to: SAGSYGNERTPVSWA*GFYSQGQDRLSAMG Trigger: CCCCATGGCCGACAGCCGGTCCTGTCCCTGACTGTAGAATCCTCATGCCCACGAGACAGGTGTCCGCTCATTTCCATAACTCCCAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | GATGACTGGCTAGCATGGAAGGGTGACAGCAAAGCCATCACAAAGTaGGCTGCGGGGATCCAGCCACAGCCACCATGGGCTGAGCACCAT | + |
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Preference number: 1 (lower is better) Translates to: DDWLAWKGDSKAITK*AAGIQPQPPWAEHH Trigger: ATGGTGCTCAGCCCATGGTGGCTGTGGCTGGATCCCCGCAGCCCACTTTGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | CCCCAGCTCCAGCAGAGCCTGGATCTCAGCTGGGAGTTATGGAAATaGGCGGACACCTGTCTCGTGGGCATGAGGATTCTACAGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PQLQQSLDLSWELWK*ADTCLVGMRILQSG Trigger: CCCTGACTGTAGAATCCTCATGCCCACGAGACAGGTGTCCGCTCATTTCCATAACTCCCAGCTGAGATCCAGGCTCTGCTGGAGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | CTACAGTCAGGGACAGGACCGGCTGTCGGCCATGGGGAAGATGACTaGCTAGCATGGAAGGGTGACAGCAAAGCCATCACAAAGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LQSGTGPAVGHGEDD*LAWKGDSKAITKWA Trigger: AGCCCACTTTGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCCGACAGCCGGTCCTGTCCCTGACTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | CTGTCCAAAATCCAACATGAAGCAGCAGCTCTGAGCCAGCGCACATaGCTGGCTGGCTCCCTTGAGGATCTGCAGATCCTGACTGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LSKIQHEAAALSQRT*LAGSLEDLQILTAL Trigger: TAGGGCAGTCAGGATCTGCAGATCCTCAAGGGAGCCAGCCAGCCATGTGCGCTGGCTCAGAGCTGCTGCTTCATGTTGGATTTTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | AGCCTCCAAGGCGAATCTTCTCTAACGCCAAACCGCAAAGGCAGATaGGTGTGCCAGAGATCCAGGCCAGTGTGTAAGGCCCTCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: SLQGESSLTPNRKGR*VCQRSRPVCKALSP Trigger: TGGTGAGAGGGCCTTACACACTGGCCTGGATCTCTGGCACACCCATCTGCCTTTGCGGTTTGGCGTTAGAGAAGATTCGCCTTGGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | CTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATaGAGCAGCAGCTCTGAGCCAGCGCACATGGCTGGCTGGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LPQPALSENSVQNPT*SSSSEPAHMAGWLP Trigger: AGGGAGCCAGCCAGCCATGTGCGCTGGCTCAGAGCTGCTGCTTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR GCA 90 bp | CAAGGCGAATCTTCTCTAACGCCAAACCGCAAAGGCAGATGGGTGTaGCAGAGATCCAGGCCAGTGTGTAAGGCCCTCTCACCAGGATTT | + |
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Preference number: 1 (lower is better) Translates to: QGESSLTPNRKGRWV*QRSRPVCKALSPGF Trigger: AAATCCTGGTGAGAGGGCCTTACACACTGGCCTGGATCTCTGGCACACCCATCTGCCTTTGCGGTTTGGCGTTAGAGAAGATTCGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | AAAAAGAATGCACCTATGAGCCACAGAACCCCAAGTGACTGGGCCTaGCTATGTTACCAGCACGTAGATACCCAACACCCTCCAAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: KKNAPMSHRTPSDWA*LCYQHVDTQHPPRA Trigger: CGCCCTTGGAGGGTGTTGGGTATCTACGTGCTGGTAACATAGTCAGGCCCAGTCACTTGGGGTTCTGTGGCTCATAGGTGCATTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR GCA 90 bp | AAGACCAGAGAACTTAAGCAGAGTAAAGTGGCAAAGTCTGTGGCTTaGAAGGCTCTGGTCCTTCTGCCATTTTTCACACCGCCCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: KTRELKQSKVAKSVA*KALVLLPFFTPPLP Trigger: GGGGAGGGGCGGTGTGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTACTCTGCTTAAGTTCTCTGGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | GCGTGGAAATGTTTCCCTTCTAAAACCTTCCCTTGGAATGCTGCTTaGAAACCAGTCACCCGTGTGTGGCGGGTTGGAAATGGGACACCA | + |
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Preference number: 1 (lower is better) Translates to: AWKCFPSKTFPWNAA*KPVTRVWRVGNGTP Trigger: TGGTGTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAAGGGAAGGTTTTAGAAGGGAAACATTTCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | TACTCAAGACCAGAGAACTTAAGCAGAGTAAAGTGGCAAAGTCTGTaGCTTGCAAGGCTCTGGTCCTTCTGCCATTTTTCACACCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: YSRPENLSRVKWQSL*LARLWSFCHFSHRP Trigger: GGGGCGGTGTGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTACTCTGCTTAAGTTCTCTGGTCTTGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR GCA 90 bp | CTTCTCCATCTTCTCTCTCTTGTGACATCTTGTCACCAGCTCGCCTaGACTGAATGCCTGGCGTGGAAATGTTTCCCTTCTAAAACCTTC | + |
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Preference number: 1 (lower is better) Translates to: LLHLLSLVTSCHQLA*TECLAWKCFPSKTF Trigger: GAAGGTTTTAGAAGGGAAACATTTCCACGCCAGGCATTCAGTGCAGGCGAGCTGGTGACAAGATGTCACAAGAGAGAGAAGATGGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR TCA 90 bp | TCTGGAGCCCCATCATGGACCAGCTTGACTTTCCCTGATAGGAACTaGCCCACCCTGGACATGAATAAAGTCCTGATAATAATGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SGAPSWTSLTFPDRN*PTLDMNKVLIIMKG Trigger: GCCTTTCATTATTATCAGGACTTTATTCATGTCCAGGGTGGGTCAGTTCCTATCAGGGAAAGTCAAGCTGGTCCATGATGGGGCTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CCA 90 bp | GGAAATGCCACGTACTCAAGACCAGAGAACTTAAGCAGAGTAAAGTaGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTCTGCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: GNATYSRPENLSRVK*QSLWLARLWSFCHF Trigger: AAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTACTCTGCTTAAGTTCTCTGGTCTTGAGTACGTGGCATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CAA 90 bp | CCCACCCGAGGGACCCGGCCCTGCCTCACGATTAACCCTACGACTTaGGCTCTGCTTCTCAGAACCTGCCCAGGCCTGGCACCTAGAATA | + |
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Preference number: 2 (lower is better) Translates to: PTRGTRPCLTINPTT*ALLLRTCPGLAPRI Trigger: TATTCTAGGTGCCAGGCCTGGGCAGGTTCTGAGAAGCAGAGCCAAAGTCGTAGGGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGCGTGCAGTGGGCTCACAAACGGACGGCAGTGAGGTGAGGGCCACAGCCTCATGTCCCCACAAATaGCCACCACACTCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VQRAVGSQTDGSEVRATASCPHK*PPHSSC Trigger: ACAGGATGAGTGTGGTGGCCATTTGTGGGGACATGA...GGCTGTGGCCCTCACCTCACTGCCGTCCGTTTGTGAGCCCACTGCACGCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTATGAAGCAGCAGCTCTaGGCCAGCGCACATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLLSASRVKTPSPAVLGFMKQQL*ASAHGW Trigger: CCAGCCATGTGCGCTGGCTCAGAGCTGCTGCTTCAT...AAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGCCTGCACTGAATGCCTaGCGTGGAAATGTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: PGCMQPPWGAAGRVRRKLPALNA*RGNVSL Trigger: AAGGGAAACATTTCCACGCCAGGCATTCAGTGCAGG...CAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGGCCACAGCCACACAGGGTCCCCAGTCCTGCTTCTCAGGACTTGCCTTACAACCAGCACTCAGTaGGAATTCTGTCCAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: GEGHSHTGSPVLLLRTCLTTSTQ*EFCPKS Trigger: GGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGT...AAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTGTGTGGCTGTGGCCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GGCCATGGGGAAGATGACTGGCTAGCATGGAAGGGTGACAGCAAAGCCATCACACAGGGTCCCCAGTCCTaGTTCTCAGGACTTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GHGEDDWLAWKGDSKAITQGPQS*FSGLAL Trigger: TAAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTG...TGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCAGATCCTGACTGCCCTATaGACTTTCTCTGGAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLSASRVKTPSPAVLGFQILTAL*TFSGAP Trigger: TGGGGCTCCAGAGAAAGTTCATAGGGCAGTCAGGAT...CTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCTACGACTTTGGCTCTaGTTCTCAGAACCTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PLLSASRVKTPSPAVLGFLRLWL*FSEPAQ Trigger: CTGGGCAGGTTCTGAGAAGCAGAGCCAAAGTCGTAG...AAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | GTCACCAGCTCGCCTGCACTGAATGCCTGGCGTGGAAATGTTTCCCTTCTAAAAAAAGCCATCACAAAGTaGGCTGCGGGGATCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTSSPALNAWRGNVSLLKKAITK*AAGIQP Trigger: TGGCTGGATCCCCGCAGCCCACTTTGTGATGGCTTT...TTTTAGAAGGGAAACATTTCCACGCCAGGCATTCAGTGCAGGCGAGCTGGTGAC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CAA 90 bp | AAGGGTGAGGAGAAAGCTGCAGGTACAGTGTCGGTGACGTGCATCTaGAGAGGCAAGCAAGGATGCCACTCTTCTCCATCTTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KGEEKAAGTVSVTCI*RGKQGCHSSPSSLS Trigger: AGAGAGAGAAGATGGAGAAGAGTGGCATCCTTGCTTGCCTCTCAAGATGCACGTCACCGACACTGTACCTGCAGCTTTCTCCTCACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGTGGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTCTGCCATTTTTCACTGCTTCTCAGAACCTaGCCAGGCCTGGCACCTAGA | + |
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Preference number: 2 (lower is better) Translates to: VKWQSLWLARLWSFCHFSLLLRT*PGLAPR Trigger: TCTAGGTGCCAGGCCTGGGCAGGTTCTGAGAAGCAG...TGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGCTCAGAGCCTTGGTTCCCTCCTGTATTCAGAGGGGACGGTTACTAACTCTGGAGCCCCATCATaGACCAGCTTGACTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSAQSLGSLLYSEGTVTNSGAPS*TSLTFP Trigger: AGGGAAAGTCAAGCTGGTCCATGATGGGGCTCCAGA...GTTAGTAACCGTCCCCTCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | GTCACCAGCTCGCCTGCACTGAATGCCTGGCGTGGAAATGTTTCCCTTCTAAAAAGCTCCAGCAGAGCCTaGATCTCAGCTGGGAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: VTSSPALNAWRGNVSLLKSSSRA*ISAGSY Trigger: ATAACTCCCAGCTGAGATCCAGGCTCTGCTGGAGCT...TTTTAGAAGGGAAACATTTCCACGCCAGGCATTCAGTGCAGGCGAGCTGGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATGCTGCTTGAAAACCAGTCACCCGTGTGTGGCGGGTTGGAAATGGGACAGGATCTGCAGATCCTaGCTGCCCTATGAACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LECCLKTSHPCVAGWKWDRICRS*LPYELS Trigger: AGAAAGTTCATAGGGCAGTCAGGATCTGCAGATCCT...GTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGCTCAGAGCCTTGGTTCCCTCCTGTATTCAGAGGGGACGGTTACTAACGTCCAAAATCCAACATaGAGCAGCAGCTCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FSAQSLGSLLYSEGTVTNVQNPT*SSSSEP Trigger: TGGCTCAGAGCTGCTGCTTCATGTTGGATTTTGGAC...GTTAGTAACCGTCCCCTCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAAACAGCCACCATGGGCTaGGCACCATGTCCAGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: ASLNQGQYVHIILSRAPETATMG*APCPAC Trigger: GCACGCTGGACATGGTGCTCAGCCCATGGTGGCTGT...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGCTCAGAGCCTTGGTTCCCTCCTGTATTCAGAGGGGACGGTTACTAACGCTAGCATGGAAGGGTaGCAGCAAAGCCATCACAAA | + |
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Preference number: 2 (lower is better) Translates to: FSAQSLGSLLYSEGTVTNASMEG*QQSHHK Trigger: TTTGTGATGGCTTTGCTGTCACCCTTCCATGCTAGC...GTTAGTAACCGTCCCCTCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCACCCAAGTGACAAGCTaGCACAACCAGCACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: EDIMCETYDLIAASSLQGTQVTS*HNQHSV Trigger: CACTGAGTGCTGGTTGTGGCAGCTTGTCACTTGGGT...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAAGGCTGCCTGGCTGCATaGAACCTCCTTGGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASLNQGQYVHIILSRAPEGCLAA*NLLGEQ Trigger: CTGCTCCCCAAGGAGGTTGCATGCAGCCAGGCAGCC...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | GACGTGCATCTTGAGAGGCAAGCAAGGATGCCACTCTTCTCCATCTTCTCTCTCCTCTGCTCAGAGCCTTaGTTCCCTCCTGTATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: DVHLERQARMPLFSIFSLLCSEP*FPPVFR Trigger: TCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAG...GAGAGAGAAGATGGAGAAGAGTGGCATCCTTGCTTGCCTCTCAAGATGCACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GACGTGCATCTTGAGAGGCAAGCAAGGATGCCACTCTTCTCCATCTTCTCTCTCTCTGCAGATCCTGACTaGCCTATGAACTTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DVHLERQARMPLFSIFSLSADPD*PMNFLW Trigger: CCAGAGAAAGTTCATAGGGCAGTCAGGATCTGCAGA...GAGAGAGAAGATGGAGAAGAGTGGCATCCTTGCTTGCCTCTCAAGATGCACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGTGGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTCTGCCATTTTTCACTTCCCTTGGAATGCTaGTTGAAAACCAGTCACCCG | + |
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Preference number: 2 (lower is better) Translates to: VKWQSLWLARLWSFCHFSLPLEC*LKTSHP Trigger: CGGGTGACTGGTTTTCAAGCAGCATTCCAAGGGAAG...TGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CCA 90 bp | GCACCTAGAATACCGAAAGACATTCCAAACACCCAAGTGACAAGCTGCCACAACTTATCCGCCTGTAACTaGGGCTTCCCCCTTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: APRIPKDIPNTQVTSCHNLSACN*GFPLSF Trigger: AAAGGAAAGGGGGAAGCCCCAGTTACAGGCGGATAA...GTTGTGGCAGCTTGTCACTTGGGTGTTTGGAATGTCTTTCGGTATTCTAGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGTGGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTCTGCCATTTTTCAATGCGGTTTGTGCTTTaGCACACACAAGGATACCTT | + |
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Preference number: 2 (lower is better) Translates to: VKWQSLWLARLWSFCHFSMRFVL*HTQGYL Trigger: AAGGTATCCTTGTGTGTGTCAAAGCACAAACCGCAT...TGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR-3UTR CCA 90 bp | TTAATTGCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGTCCTCTGGGGCTGCCTaGCTGCATGCAACCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LIASLNQGQYVHIILSRASSGAA*LHATSL Trigger: CAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGA...CGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGCAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAACAAGCCCTGCAGTTCTaGGATTTCAGGAATGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ASLNQGQYVHIILSRAPEQALQF*DFRNED Trigger: ATCCTCATTCCTGAAATCCCAGAACTGCAGGGCTTG...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CAA 90 bp | ACTTCTTTACAAGAGGGGAAAGTCGCCGATCTTTTAATTGCTAGCTaGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TSLQEGKVADLLIAS*NQGQYVHIILSRAP Trigger: AGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGCAATTAAAAGATCGGCGACTTTCCCCTCTTGTAAAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGCTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATGAATTCCTTTGTTTAAACTaGCAATTACCATCCAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TSCHNQHSVRILSKIQHEFLCLN*QLPSKP Trigger: TGGCTTGGATGGTAATTGCCAGTTTAAACAAAGGAA...TTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | TGTCCAGCGTGCAGTGGGCTCACAAACGGACGGCAGTaGGGTGAGGGCCACAGCCACACAGGGTCCCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPACSGLTNGRQ*GEGHSHTGSPV Trigger: GACTGGGGACCCTGTGTGGCTGTGGCCCTCACCTCACTGCCGTCCGTTTGTGAGCCCACTGCACGCTGGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | GTGGGCTGCGGGGATCCAGCCACAGCCACCATGGGCTaGGCACCATGTCCAGCGTGCAGTGGGCTCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VGCGDPATATMG*APCPACSGLTN Trigger: GTTTGTGAGCCCACTGCACGCTGGACATGGTGCTCAGCCCATGGTGGCTGTGGCTGGATCCCCGCAGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | CGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTaGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPLGLPGCMQPP*GAAGRVRRKLQ Trigger: CTGCAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | GGTCCCCAGTCCTGCTTCTCAGGACTTGCCTTAGCCTaGAAAAACCCACCCGAGGGACCCGGCCCTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPQSCFSGLALA*KNPPEGPGPAS Trigger: TGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTCCAGGCTAAGGCAAGTCCTGAGAAGCAGGACTGGGGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | ACAAAGTGGGCTGCGGGGATCCAGCCACAGCCACCATaGGCTGAGCACCATGTCCAGCGTGCAGTGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TKWAAGIQPQPP*AEHHVQRAVGS Trigger: TGAGCCCACTGCACGCTGGACATGGTGCTCAGCCCATGGTGGCTGTGGCTGGATCCCCGCAGCCCACTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | AGCCACACAGGGTCCCCAGTCCTGCTTCTCAGGACTTaGCTTAGCCTGGAAAAACCCACCCGAGGGACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SHTGSPVLLLRT*LSLEKPTRGTR Trigger: CCGGGTCCCTCGGGTGGGTTTTTCCAGGCTAAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTGTGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | GCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTaGGGAGAAAGCTGCAGGTACAGTGTCGGTGACGTG | + |
|
Preference number: 3 (lower is better) Translates to: AACNLLGEQPEG*GESCRYSVGDV Trigger: CACGTCACCGACACTGTACCTGCAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | GAGGTGAGGGCCACAGCCACACAGGGTCCCCAGTCCTaGTTCTCAGGACTTGCCTTAGCCTGGAAAAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: EVRATATQGPQS*FSGLALAWKNP Trigger: TGGGTTTTTCCAGGCTAAGGCAAGTCCTGAGAAGCAGGACTGGGGACCCTGTGTGGCTGTGGCCCTCACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | GGGACAGGACCGGCTGTCGGCCATGGGGAAGATGACTaGCTAGCATGGAAGGGTGACAGCAAAGCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: GTGPAVGHGEDD*LAWKGDSKAIT Trigger: TGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCCGACAGCCGGTCCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCTGAGAAAACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTGGGGCCCTTGGAATGCTGCTaGAAAACCAGTCACCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSEKTSSGAAWLHATSLGPLECC*KTSHPC Trigger: ACACGGGTGACTGGTTTTCAAGCAGCATTCCAAGGG...CCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGTTTTCTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | CTTAGCCTGGAAAAACCCACCCGAGGGACCCGGCCCTaGCTCACGATTAACCCTACGACTTTGGCTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLEKPTRGTRP*LTINPTTLALL Trigger: AAGCAGAGCCAAAGTCGTAGGGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTCCAGGCTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | CCGGCTGTCGGCCATGGGGAAGATGACTGGCTAGCATaGAAGGGTGACAGCAAAGCCATCACAAAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PAVGHGEDDWLA*KGDSKAITKWA Trigger: AGCCCACTTTGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCCGACAGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | AGCTCTGAGCCAGCGCACATGGCTGGCTGGCTCCCTTaGGGATCTGCAGATCCTGACTGCCCTATGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSEPAHMAGWLP*GSADPDCPMNF Trigger: AAAGTTCATAGGGCAGTCAGGATCTGCAGATCCTCAAGGGAGCCAGCCAGCCATGTGCGCTGGCTCAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | GGCGAATCTTCTCTAACGCCAAACCGCAAAGGCAGATaGGTGTGCCAGAGATCCAGGCCAGTGTGTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GESSLTPNRKGR*VCQRSRPVCKA Trigger: GGCCTTACACACTGGCCTGGATCTCTGGCACACCCATCTGCCTTTGCGGTTTGGCGTTAGAGAAGATTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | CATGGCTGGCTGGCTCCCTTGAGGATCTGCAGATCCTaGCTGCCCTATGAACTTTCTCTGGAGCCCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: HGWLAPLRICRS*LPYELSLEPHH Trigger: ATGATGGGGCTCCAGAGAAAGTTCATAGGGCAGTCAGGATCTGCAGATCCTCAAGGGAGCCAGCCAGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | GAATTCTGTCCAAAATCCAACATGAAGCAGCAGCTCTaGGCCAGCGCACATGGCTGGCTGGCTCCCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EFCPKSNMKQQL*ASAHGWLAPLR Trigger: CCTCAAGGGAGCCAGCCAGCCATGTGCGCTGGCTCAGAGCTGCTGCTTCATGTTGGATTTTGGACAGAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | AGTTATGGAAATGAGCGGACACCTGTCTCGTGGGCATaGGGATTCTACAGTCAGGGACAGGACCGGCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SYGNERTPVSWA*GFYSQGQDRLS Trigger: CGACAGCCGGTCCTGTCCCTGACTGTAGAATCCTCATGCCCACGAGACAGGTGTCCGCTCATTTCCATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | TCTTCTCTAACGCCAAACCGCAAAGGCAGATGGGTGTaGCAGAGATCCAGGCCAGTGTGTAAGGCCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLTPNRKGRWV*QRSRPVCKALS Trigger: TGAGAGGGCCTTACACACTGGCCTGGATCTCTGGCACACCCATCTGCCTTTGCGGTTTGGCGTTAGAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | AGAGTAAAGTGGCAAAGTCTGTGGCTTGCAAGGCTCTaGTCCTTCTGCCATTTTTCACACCGCCCCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RVKWQSLWLARL*SFCHFSHRPSP Trigger: GGGGGAGGGGCGGTGTGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | CCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATaGAGCAGCAGCTCTGAGCCAGCGCACATGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PALSENSVQNPT*SSSSEPAHMAG Trigger: GCCAGCCATGTGCGCTGGCTCAGAGCTGCTGCTTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | GGTGAGGAGAAAGCTGCAGGTACAGTGTCGGTGACGTaGATCTTGAGAGGCAAGCAAGGATGCCACTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GEEKAAGTVSVT*ILRGKQGCHSS Trigger: AGAAGAGTGGCATCCTTGCTTGCCTCTCAAGATGCACGTCACCGACACTGTACCTGCAGCTTTCTCCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | CGACTTTGGCTCTGCTTCTCAGAACCTGCCCAGGCCTaGCACCTAGAATACCGAAAGACATTCCAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: RLWLCFSEPAQA*HLEYRKTFQTP Trigger: GGGTGTTTGGAATGTCTTTCGGTATTCTAGGTGCCAGGCCTGGGCAGGTTCTGAGAAGCAGAGCCAAAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | CTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTaGGATTTCAGGAATGAGGATGGAGTAGGGGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLPGSKRQALQF*DFRNEDGVGVT Trigger: AGTGACCCCTACTCCATCCTCATTCCTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | TATGAACTTTCTCTGGAGCCCCATCATGGACCAGCTTaGCTTTCCCTGATAGGAACTGACCCACCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: YELSLEPHHGPA*LSLIGTDPPWT Trigger: TGTCCAGGGTGGGTCAGTTCCTATCAGGGAAAGTCAAGCTGGTCCATGATGGGGCTCCAGAGAAAGTTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR GCA 72 bp | ATTAACCCTACGACTTTGGCTCTGCTTCTCAGAACCTaGCCAGGCCTGGCACCTAGAATACCGAAAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: INPTTLALLLRT*PGLAPRIPKDI Trigger: AATGTCTTTCGGTATTCTAGGTGCCAGGCCTGGGCAGGTTCTGAGAAGCAGAGCCAAAGTCGTAGGGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR-3UTR CAA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCCATGCGGTTTGTGCTTaGACACACACAAGGATACCT | + |
|
Preference number: 3 (lower is better) Translates to: EDIMCETYDLIAASSLQGHAVCA*THTRIP Trigger: AGGTATCCTTGTGTGTGTCAAAGCACAAACCGCATG...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR TCA 72 bp | TGTTTCCCTTCTAAAACCTTCCCTTGGAATGCTGCTTaGAAACCAGTCACCCGTGTGTGGCGGGTTGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CFPSKTFPWNAA*KPVTRVWRVGN Trigger: ATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAAGGGAAGGTTTTAGAAGGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | ACGTACTCAAGACCAGAGAACTTAAGCAGAGTAAAGTaGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TYSRPENLSRVK*QSLWLARLWSF Trigger: GAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTACTCTGCTTAAGTTCTCTGGTCTTGAGTACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | ATACCGAAAGACATTCCAAACACCCAAGTGACAAGCTaGCACAACCAGCACTCAGTGAGAATTCTGTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPKDIPNTQVTS*HNQHSVRILSK Trigger: TTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGTCACTTGGGTGTTTGGAATGTCTTTCGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGCTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATGAAGCTTCCCCCTTTCCTTaGTTTAAACTGGCAATTACC | + |
|
Preference number: 3 (lower is better) Translates to: TSCHNQHSVRILSKIQHEASPFP*FKLAIT Trigger: GGTAATTGCCAGTTTAAACAAAGGAAAGGGGGAAGC...TTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | TTTCTGTGTAAATACATGGCCAGAAGTGAGTGTGCATaGGGTTTGTGCTTTGACACACACAAGGATACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLCKYMARSECA*GLCFDTHKDTL Trigger: CAAGGTATCCTTGTGTGTGTCAAAGCACAAACCGCATGCACACTCACTTCTGGCCATGTATTTACACAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR GCA 72 bp | GACATTTCAAACAGAAGTCTGGAAACTAGGGCCATGTaGAAGACCCCTCCTTTTGAAGACCGTGTAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: DISNRSLETRAM*KTPPFEDRVRF Trigger: AAATCTTACACGGTCTTCAAAAGGAGGGGTCTTGCACATGGCCCTAGTTTCCAGACTTCTGTTTGAAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CCA 72 bp | CACCAGGATTTTGGCTTCAATGGGATTAAATACGACTaGCCACATTCTTCAACTTCTTTACAAGAGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HQDFGFNGIKYD*PHSSTSLQEGK Trigger: TTTCCCCTCTTGTAAAGAAGTTGAAGAATGTGGCCAGTCGTATTTAATCCCATTGAAGCCAAAATCCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | AGGCCCAGCCAGAGACAGGAGGGCCGTAAACAAAGGAGCCCTGGACCGGGCACAGTGGACAGCAGCGAGTaGGCGGCGTTCTGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSQRQEGRKQRSPGPGTVDSSE*AAFCCG Trigger: CCCGCAGCAGAACGCCGCGCACTCGCTGCTGTCCAC...TGTGCCCGGTCCAGGGCTCCTTTGTTTACGGCCCTCCTGTCTCTGGCTGGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR TCA 90 bp | GTCCAGCGTGCAGTGGGCTCACAAACGGACGGCAGTGAGGTGAGGGCCACAGCCAGCGCCCACTGTGGCTaGACTTCACGTCGGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: VQRAVGSQTDGSEVRATASAHCG*TSRRTP Trigger: CGGTGTCCGACGTGAAGTTCAGCCACAGTGGGCGCT...GGCTGTGGCCCTCACCTCACTGCCGTCCGTTTGTGAGCCCACTGCACGCTGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | GAAAAACCCACCCGAGGGACCCGGCCCTGCCTCACGATTAACCCTACGACTTTGCGTCACGCCGCCGCTTaGCACCCACACACACGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTRGTRPCLTINPTTLRHAAA*HPHTRA Trigger: GGCGCGTGTGTGTGGGTGGCAAGCGGCGGCGTGACG...CAAAGTCGTAGGGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CAA 72 bp | ACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTaGGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSGAAWLHATS*GSSRKGEEKAA Trigger: TGCAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGCCAAGCTGTCCACACTaGTGTCGTCACGCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCMQPPWGAAGRVRRKLPSCPH*CRHAAA Trigger: AGCGGCGGCGTGACGACATCAGTGTGGACAGCTTGG...CAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | GTCCAGCGTGCAGTGGGCTCACAAACGGACGGCAGTGAGGTGAGGGCCACAGCCGGGAGCCCTTGCTGCTaGTGTAGACGAAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQRAVGSQTDGSEVRATAGSPCC*CRRRGC Trigger: GCAACCTCTTCGTCTACAGCAGCAGCAAGGGCTCCC...GGCTGTGGCCCTCACCTCACTGCCGTCCGTTTGTGAGCCCACTGCACGCTGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR TCA 90 bp | GAAAAACCCACCCGAGGGACCCGGCCCTGCCTCACGATTAACCCTACGACTTTGCACAGGCACCTGCAGTaGCGTCACCGTGGACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTRGTRPCLTINPTTLHRHLQ*RHRGQV Trigger: GACCTGTCCACGGTGACGTCACTGCAGGTGCCTGTG...CAAAGTCGTAGGGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGAGAAAACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTGGGGTGCGCGGCGTTCTGCTaGGGGAGCCATTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEKTSSGAAWLHATSLGCAAFC*GSHLIL Trigger: CAAGATCAAATGGCTCCCGCAGCAGAACGCCGCGCA...CCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGTTTTCTCAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGAGAAAACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTGGGGGCAGGGAGCCCTTGCTaGTGCTGTAGACGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSEKTSSGAAWLHATSLGAGSPC*CCRRRG Trigger: ACCTCTTCGTCTACAGCAGCAGCAAGGGCTCCCTGC...CCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGTTTTCTCAGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAGCCAGAGACAGGAGGGCCGTAAACAAAGGAGCCCTGGACCGGGCACATTGCAGTGGTGCGGATaGAACTCGGATGCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RPSQRQEGRKQRSPGPGTLQWCG*NSDAVI Trigger: GATCACAGCATCCGAGTTCCATCCGCACCACTGCAA...TGTGCCCGGTCCAGGGCTCCTTTGTTTACGGCCCTCCTGTCTCTGGCTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGTCAGTGATGGCCAGATaGCAGAGGTTGATGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGCMQPPWGAAGRVRRKLSVMAR*QRLMRR Trigger: CCTACGCATCAACCTCTGGCATCTGGCCATCACTGA...CAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGCACCTGCAGTGACGTCACCGTGGACAGGTCCTTCAGCTTTCCCTCCTCACACCCTTGTCACCTGTaGCGAGCAGTTCCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTCSDVTVDRSFSFPSSHPCHL*RAVPQC Trigger: ACACTGGGGAACTGCTCGCCACAGGTGACAAGGGTG...TGAGGAGGGAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201156.2 |
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| CDS-3UTR GCA 90 bp | GGCCATGGGGAAGATGACTGGCTAGCATGGAAGGGTGACAGCAAAGCCATCACAGCCGCAGGGAGCCCTTaGTGCTGCTGTAGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHGEDDWLAWKGDSKAITAAGSP*CCCRRR Trigger: TCTTCGTCTACAGCAGCAGCAAGGGCTCCCTGCGGC...TGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | GCACAGGCACCTGCAGTGACGTCACCGTGGACAGGTCCTTCAGCTTTCCCTCCTTCCCGCAGGAAGCTGTaGTTAATTTTCCGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAPAVTSPWTGPSAFPPSRRKL*LIFRVS Trigger: GGACACGCGGAAAATTAACCACAGCTTCCTGCGGGA...AGGAGGGAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201156.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCCTTGGGACTCATGTCCCCACAAATGGCCACCACACTCATCCTGTCCTCCACCCTTGTCACCTGTaGCGAGCAGTTCCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLGTHVPTNGHHTHPVLHPCHL*RAVPQC Trigger: ACACTGGGGAACTGCTCGCCACAGGTGACAAGGGTG...GAGGACAGGATGAGTGTGGTGGCCATTTGTGGGGACATGAGTCCCAAGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | AGGCCCAGCCAGAGACAGGAGGGCCGTAAACAAAGGAGCCCTGGACCGGGCACATGCGTTCTTACTCTCTaGTTCCCGCTGGAAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPSQRQEGRKQRSPGPGTCVLTL*FPLEDN Trigger: GTTATCTTCCAGCGGGAACCAGAGAGTAAGAACGCA...TGTGCCCGGTCCAGGGCTCCTTTGTTTACGGCCCTCCTGTCTCTGGCTGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGAAAACGTCCTCTGGGGCTGCCTGGCTGCATGCAACCTCCTTGGGGACGAAGAGGTTGCAGTaGTGCGGATGGAACTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSEKTSSGAAWLHATSLGTKRLQ*CGWNSD Trigger: ATCCGAGTTCCATCCGCACCACTGCAACCTCTTCGT...CCCCAAGGAGGTTGCATGCAGCCAGGCAGCCCCAGAGGACGTTTTCTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | ACAGGCACCTGCAGTGACGTCACCGTGGACAGGTCCTTCAGCTTTCCCTCCTCAATCTCTGGTTCCCGCTaGAAGATAACCACCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGTCSDVTVDRSFSFPSSISGSR*KITTRP Trigger: TGGCCGGGTGGTTATCTTCCAGCGGGAACCAGAGAT...TGAGGAGGGAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201156.2 |
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| 3UTR CAA 72 bp | ATGCTGCTTGAAAACCAGTCACCCGTGTGTGGCGGGTaGGAAATGGGACACCAGCTCAGCCCTCGGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: MLLENQSPVCGG*EMGHQLSPRGM Trigger: CATACCCCGAGGGCTGAGCTGGTGTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | TCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCAGGAATGAGGATGGAGTAGGGGTCGCACAAGGCAGCTaGCCGCATGTCACAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKRQALQFWDFRNEDGVGVAQGS*PHVTEP Trigger: CGGCTCTGTGACATGCGGGCAGCTGCCTTGTGCGAC...CCCTACTCCATCCTCATTCCTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCTCTCTGGTTCCCGCTaGAAGATAACCACCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSASRVKTPSPAVLGFLSGSR*KITTRP Trigger: TGGCCGGGTGGTTATCTTCCAGCGGGAACCAGAGAG...AAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CCA 90 bp | GGCCATGGGGAAGATGACTGGCTAGCATGGAAGGGTGACAGCAAAGCCATCACAGGCAAAGGTCCTTCTTaGGCTCACCTCCACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHGEDDWLAWKGDSKAITGKGPS*AHLHHQ Trigger: CTGATGGTGGAGGTGAGCCCAAGAAGGACCTTTGCC...TGTGATGGCTTTGCTGTCACCCTTCCATGCTAGCCAGTCATCTTCCCCATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | TTGGAATGCTGCTTGAAAACCAGTCACCCGTGTGTGGCGGGTTGGAAATGGGACCCTGGTAGGTCTCTATaGGCCTCGCCTCCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LECCLKTSHPCVAGWKWDPGRSL*ASPPCS Trigger: TGAACATGGAGGCGAGGCCCATAGAGACCTACCAGG...GTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR TCA 90 bp | TTGGAATGCTGCTTGAAAACCAGTCACCCGTGTGTGGCGGGTTGGAAATGGGACCGAGGAGATGATCTCTaGAAAGAAGGAGCGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LECCLKTSHPCVAGWKWDRGDDL*KEGAVA Trigger: AGCAACCGCTCCTTCTTTTCAGAGATCATCTCCTCG...GTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR TCA 90 bp | TCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCAGGAATGAGGATGGAGTAGGGCGGACACCGAGGAGATaGTCTCTGAAAAGAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRQALQFWDFRNEDGVGRTPRR*SLKRRS Trigger: GCTCCTTCTTTTCAGAGATCATCTCCTCGGTGTCCG...CCCTACTCCATCCTCATTCCTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGCTCAGAGCCTTGGTTCCCTCCTGTATTCAGAGGGGACGGTTACTAACTCCCGCAGGAAGCTGTaGTTAATTTTCCGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSAQSLGSLLYSEGTVTNSRRKL*LIFRVS Trigger: GGACACGCGGAAAATTAACCACAGCTTCCTGCGGGA...GTTAGTAACCGTCCCCTCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR TCA 90 bp | ACAAGCTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATGAACCAGATGCCAGAGGTTaGTGCGTAGGTCGTCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSCHNQHSVRILSKIQHEPDARG*CVGRPL Trigger: CAGCGGACGACCTACGCATCAACCTCTGGCATCTGG...TTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | GTAAAGTGGCAAAGTCTGTGGCTTGCAAGGCTCTGGTCCTTCTGCCATTTTTCAGCAGTGACGTCACCGTaGACAGGTCCTTCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKWQSLWLARLWSFCHFSAVTSP*TGPSAF Trigger: GAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGC...TGAAAAATGGCAGAAGGACCAGAGCCTTGCAAGCCACAGACTTTGCCACTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CCA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCAATGATATTCTCAGCTaGGTGCCAGGCCGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDIMCETYDLIAASSLQGNDILS*VPGRVQ Trigger: CTGCACACGGCCTGGCACCCAGCTGAGAATATCATT...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| 3UTR CAA 72 bp | TTAAACTGGCAATTACCATCCAAGCCAACTCCAGCCTaGGGACTCATGTCCCCACAAATGGCCACCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LNWQLPSKPTPA*GLMSPQMATTL Trigger: GAGTGTGGTGGCCATTTGTGGGGACATGAGTCCCAAGGCTGGAGTTGGCTTGGATGGTAATTGCCAGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCTGTAGACGAAGAGGTTaGAGTGGTGCGGATGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: EDIMCETYDLIAASSLQGCRRRG*SGADGT Trigger: AGTTCCATCCGCACCACTGCAACCTCTTCGTCTACA...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | ACGACTGGCCACATTCTTCAACTTCTTTACAAGAGGGGAAAGTCGCCGATCTTTATATTCTCAGCTGGGTaGCAGGCCGTGTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TTGHILQLLYKRGKSPIFIFSAG*QAVCRI Trigger: GATCCTGCACACGGCCTGGCACCCAGCTGAGAATAT...AAAGATCGGCGACTTTCCCCTCTTGTAAAGAAGTTGAAGAATGTGGCCAGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR TCA 90 bp | ACGACTGGCCACATTCTTCAACTTCTTTACAAGAGGGGAAAGTCGCCGATCTTTTACTCACCCTGGCTGTaGGGTGCGTTCTTACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGHILQLLYKRGKSPIFYSPWL*GAFLLS Trigger: AGAGAGTAAGAACGCACCTCACAGCCAGGGTGAGTA...AAAGATCGGCGACTTTCCCCTCTTGTAAAGAAGTTGAAGAATGTGGCCAGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | ACGACTGGCCACATTCTTCAACTTCTTTACAAGAGGGGAAAGTCGCCGATCTTTACCCTGGCTGTGAGGTaGGTTCTTACTCTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGHILQLLYKRGKSPIFTLAVR*VLTLWF Trigger: GAACCAGAGAGTAAGAACGCACCTCACAGCCAGGGT...AAAGATCGGCGACTTTCCCCTCTTGTAAAGAAGTTGAAGAATGTGGCCAGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAATTCAGCACAGGCACCTaGAGTGACGTCACCGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLNQGQYVHIILSRAPEFSTGT*SDVTVD Trigger: GTCCACGGTGACGTCACTGCAGGTGCCTGTGCTGAA...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | TTGGAATGCTGCTTGAAAACCAGTCACCCGTGTGTGGCGGGTTGGAAATGGGACCAAACTTGTCAAAGATaGAGTCACTCTCATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LECCLKTSHPCVAGWKWDQTCQR*SHSHTG Trigger: CCCTGTATGAGAGTGACTGCATCTTTGACAAGTTTG...GTCCCATTTCCAACCCGCCACACACGGGTGACTGGTTTTCAAGCAGCATTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATGAAGGTAGGTGTGGCCATTaGCAAAGGTCCTTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCHNQHSVRILSKIQHEGRCGH*QRSFLG Trigger: GCCCAAGAAGGACCTTTGCCAATGGCCACACCTACC...TTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CAA 72 bp | CTTTATCCGCCTGTAACTGGGGCTTCCCCCTTTCCTTaGTTTAAACTGGCAATTACCATCCAAGCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYPPVTGASPFP*FKLAITIQANS Trigger: GGAGTTGGCTTGGATGGTAATTGCCAGTTTAAACAAAGGAAAGGGGGAAGCCCCAGTTACAGGCGGATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR TCA 90 bp | TTAATTGCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGACACGCGCCTTGGCTTaGGCACCGCTCTGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIASLNQGQYVHIILSRATRALA*APLWVC Trigger: GCAAACCCAGAGCGGTGCTCAAGCCAAGGCGCGTGT...CGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGCAATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAAAAGAGGTTGCAGTGGTaGGGATGGAACTCGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLNQGQYVHIILSRAPEKRLQW*GWNSDA Trigger: AGCATCCGAGTTCCATCCGCACCACTGCAACCTCTT...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CAA 72 bp | TGTAAATACATGGCCAGAAGTGAGTGTGCATGCGGTTaGTGCTTTGACACACACAAGGATACCTTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CKYMARSECACG*CFDTHKDTLIH Trigger: GTGGATCAAGGTATCCTTGTGTGTGTCAAAGCACAAACCGCATGCACACTCACTTCTGGCCATGTATTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR GCA 90 bp | ACAAGCTGCCACAACCAGCACTCAGTGAGAATTCTGTCCAAAATCCAACATGAACAGGTTGTTGGTGGCTaGAATGGCAATGATATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSCHNQHSVRILSKIQHEQVVGG*NGNDIL Trigger: GAGAATATCATTGCCATTGCAGCCACCAACAACCTG...TTCATGTTGGATTTTGGACAGAATTCTCACTGAGTGCTGGTTGTGGCAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR TCA 90 bp | GTAATGATTATGGGAAATGCCACGTACTCAAGACCAGAGAACTTAAGCAGAGTAAGTGCATGTCAGAGTTaGCCTTATCCTGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VMIMGNATYSRPENLSRVSACQS*PYPGRC Trigger: ACATCTTCCAGGATAAGGTCAACTCTGACATGCACT...TACTCTGCTTAAGTTCTCTGGTCTTGAGTACGTGGCATTTCCCATAATCATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CCA 90 bp | GCTAGCTTGAATCAGGGTCAATATGTACATATAATACTGTCCAGAGCGCCTGAAGAGTTGACCTTATCCTaGAAGATGTACAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLNQGQYVHIILSRAPEELTLS*KMYRLL Trigger: CAACAACCTGTACATCTTCCAGGATAAGGTCAACTC...TTCAGGCGCTCTGGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| 3UTR CAA 72 bp | CAAGAGGGGAAAGTCGCCGATCTTTTAATTGCTAGCTaGAATCAGGGTCAATATGTACATATAATACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEGKVADLLIAS*NQGQYVHIILS Trigger: GGACAGTATTATATGTACATATTGACCCTGATTCAAGCTAGCAATTAAAAGATCGGCGACTTTCCCCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CAA 90 bp | TTCAGCACAGGCACCTGCAGTGACGTCACCGTGGACAGGTCCTTCAGCTTTCCCACCACCCGGCCACCCTaGTCACCTGTGGCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSTGTCSDVTVDRSFSFPTTRPP*SPVASS Trigger: ACTGCTCGCCACAGGTGACAAGGGTGGCCGGGTGGT...GGGAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCTGTGCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201156.2 |
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| CDS-3UTR CAA 90 bp | CCTGGCTGCATGCAACCTCCTTGGGGAGCAGCCGGAAGGGTGAGGAGAAAGCTGGCCAGATGCCAGAGGTaGATGCGTAGGTCGTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGCMQPPWGAAGRVRRKLARCQR*MRRSSA Trigger: AGCGGACGACCTACGCATCAACCTCTGGCATCTGGC...CAGCTTTCTCCTCACCCTTCCGGCTGCTCCCCAAGGAGGTTGCATGCAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CAA 90 bp | TTCTCTGCTCAGAGCCTTGGTTCCCTCCTGTATTCAGAGGGGACGGTTACTAACACCACCCGGCCACCCTaGTCACCTGTGGCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSAQSLGSLLYSEGTVTNTTRPP*SPVASS Trigger: ACTGCTCGCCACAGGTGACAAGGGTGGCCGGGTGGT...GTTAGTAACCGTCCCCTCTGAATACAGGAGGGAACCAAGGCTCTGAGCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCACCCGAGGGACCCGGCCCTGCCTCACGATTAACCCTACGACTTTGTGGCAAAGGTCCTTCTaGGGCTCACCTCCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EKPTRGTRPCLTINPTTLWQRSF*GSPPPS Trigger: TGATGGTGGAGGTGAGCCCAAGAAGGACCTTTGCCA...CAAAGTCGTAGGGTTAATCGTGAGGCAGGGCCGGGTCCCTCGGGTGGGTTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGCACAGGCACCTGCAGTGACGTCACCGTGGACAGGTCCTTCAGCTTTCCCAGTTCCCCAGTGTGGTaGAACTCGACAGTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSTGTCSDVTVDRSFSFPSSPVW*NSTVEM Trigger: CATCTCCACTGTCGAGTTCAACCACACTGGGGAACT...GGGAAAGCTGAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCTGTGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201156.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTAGTTCCCCAGTGTGGTaGAACTCGACAGTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSASRVKTPSPAVLGFSSPVW*NSTVEM Trigger: CATCTCCACTGTCGAGTTCAACCACACTGGGGAACT...AAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTCTGCTTCCAGGGTCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCAGGGCTCTTCAAAGAGCTaGGAGTGCTTGTCGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSASRVKTPSPAVLGFQGSSKS*ECLSHK Trigger: CTTGTGCGACAAGCACTCCAAGCTCTTTGAAGAGCC...CTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGACCCTGGAAGCAGAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS GCA 90 bp | GGCTTGATGTCTACAATGTTGAAGCTCCGATCAGTGATGGCCAGATaGCAGAGGTTGATGCGTAGGTCGTCCGCTGACATGTACGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLMSTMLKLRSVMAR*QRLMRRSSADMYVS Trigger: TGAGACGTACATGTCAGCGGACGACCTACGCATCAACCTCTGGCATCTGGCCATCACTGATCGGAGCTTCAACATTGTAGACATCAAGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | GCCTCACGATTAACCCTACGACTTTGGCTCTGCTTCTCAGAACCTGCCCAGGCCTTGATAGTTTTATCATaGGTGGACAGCAGCGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASRLTLRLWLCFSEPAQALIVLS*VDSSEC Trigger: GCACTCGCTGCTGTCCACCAATGATAAAACTATCAA...GGCCTGGGCAGGTTCTGAGAAGCAGAGCCAAAGTCGTAGGGTTAATCGTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | TCAAAACGCCAAGCCCTGCAGTTCTGGGATTTCAGGAATGAGGATGGAGTAGGGCAGGCACACTCAAACTaGTCAAAGATGCAGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SKRQALQFWDFRNEDGVGQAHSN*SKMQSL Trigger: GAGTGACTGCATCTTTGACAAGTTTGAGTGTGCCTG...CCCTACTCCATCCTCATTCCTGAAATCCCAGAACTGCAGGGCTTGGCGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCTGCTGCGGGAGCCATTaGATCTTGTTGATTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDIMCETYDLIAASSLQGCCGSH*ILLIFS Trigger: GGAGAAAATCAACAAGATCAAATGGCTCCCGCAGCA...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCAAGATGTACAGGTTGTaGGTGGCTGCAATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EDIMCETYDLIAASSLQGKMYRL*VAAMAM Trigger: CATTGCCATTGCAGCCACCAACAACCTGTACATCTT...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
||
| CDS-3UTR CAA 90 bp | GAAGACATTATGTGTGAAACCTATGACCTCATAGCAGCCTCCAGCCTCCAAGGCAGCCATTTGATCTTGTaGATTTTCTCCTCTATCTCC | + |
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Preference number: 5 (lower is better) Translates to: EDIMCETYDLIAASSLQGSHLIL*IFSSIS Trigger: GGAGATAGAGGAGAAAATCAACAAGATCAAATGGCT...GCCTTGGAGGCTGGAGGCTGCTATGAGGTCATAGGTTTCACACATAATGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS-3UTR CAA 90 bp | GTAATGATTATGGGAAATGCCACGTACTCAAGACCAGAGAACTTAAGCAGAGTAGGGAGCCATTTGATCTaGTTGATTTTCTCCTCTATC | + |
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Preference number: 5 (lower is better) Translates to: VMIMGNATYSRPENLSRVGSHLI*LIFSSI Trigger: GATAGAGGAGAAAATCAACAAGATCAAATGGCTCCC...TACTCTGCTTAAGTTCTCTGGTCTTGAGTACGTGGCATTTCCCATAATCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS TCA 72 bp | GCCGCCGCTTGCCACCCACACACACGCGCCTTGGCTTaGGCACCGCTCTGGGTTTGCTGCTCTCCCGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AAACHPHTRALA*APLWVCCSPAR Trigger: CCTCGCGGGAGAGCAGCAAACCCAGAGCGGTGCTCAAGCCAAGGCGCGTGTGTGTGGGTGGCAAGCGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS CAA 72 bp | ACACACACGCGCCTTGGCTTGAGCACCGCTCTGGGTTaGCTGCTCTCCCGCGAGGCTTCCAGTGTCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: THTRLGLSTALG*LLSREASSVTS Trigger: GGACGTGACACTGGAAGCCTCGCGGGAGAGCAGCAAACCCAGAGCGGTGCTCAAGCCAAGGCGCGTGTGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS CAA 72 bp | TCTGGTTCCCGCTGGAAGATAACCACCCGGCCACCCTaGTCACCTGTGGCGAGCAGTTCCCCAGTGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSRWKITTRPP*SPVASSSPVWL Trigger: CAACCACACTGGGGAACTGCTCGCCACAGGTGACAAGGGTGGCCGGGTGGTTATCTTCCAGCGGGAACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031003.11 ENSMUST00000201156.2 |
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| CDS CCA 72 bp | CCACCCTTGTCACCTGTGGCGAGCAGTTCCCCAGTGTaGTTGAACTCGACAGTGGAGATGACGTCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPLSPVASSSPV*LNSTVEMTSAS Trigger: AGAAGCTGACGTCATCTCCACTGTCGAGTTCAACCACACTGGGGAACTGCTCGCCACAGGTGACAAGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031003.11 ENSMUST00000201156.2 |
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| CDS CAA 72 bp | CCCTTGTCACCTGTGGCGAGCAGTTCCCCAGTGTGGTaGAACTCGACAGTGGAGATGACGTCAGCTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PLSPVASSSPVW*NSTVEMTSASV Trigger: GACAGAAGCTGACGTCATCTCCACTGTCGAGTTCAACCACACTGGGGAACTGCTCGCCACAGGTGACAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031003.11 ENSMUST00000201156.2 |
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| CDS GCA 72 bp | GGTGCTGTATACATCGTACTCACCCTGGCTGTGAGGTaGGTTCTTACTCTCTGGTTCCCGCTGGAAGATAAC | + |
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Preference number: 6 (lower is better) Translates to: GAVYIVLTLAVR*VLTLWFPLEDN Trigger: GTTATCTTCCAGCGGGAACCAGAGAGTAAGAACGCACCTCACAGCCAGGGTGAGTACGATGTATACAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS GCA 72 bp | TCTACAATGTTGAAGCTCCGATCAGTGATGGCCAGATaGCAGAGGTTGATGCGTAGGTCGTCCGCTGACATG | + |
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Preference number: 6 (lower is better) Translates to: STMLKLRSVMAR*QRLMRRSSADM Trigger: CATGTCAGCGGACGACCTACGCATCAACCTCTGGCATCTGGCCATCACTGATCGGAGCTTCAACATTGTAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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| CDS CAA 72 bp | TCAGAGTTGACCTTATCCTGGAAGATGTACAGGTTGTaGGTGGCTGCAATGGCAATGATATTCTCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SELTLSWKMYRL*VAAMAMIFSAG Trigger: CCCAGCTGAGAATATCATTGCCATTGCAGCCACCAACAACCTGTACATCTTCCAGGATAAGGTCAACTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031003.11 |
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