Pregenerated sensors for PPP2R2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022052Ensembl transcript IDs: ENSMUST00000089230.7, ENSMUST00000225251.2, ENSMUST00000225380.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCACACAGCTTTCTCCATGAGGCTATCAAATGTGTTGTTGAATaGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCGCT | + |
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Preference number: 1 (lower is better) Translates to: HPHSFLHEAIKCVVE*HTVKHWKGAPQWTA Trigger: AGCGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCAACAACACATTTGATAGCCTCATGGAGAAAGCTGTGTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR GCA 90 bp | TCTTTCGCTTGCCACTTGCACAGACTTTGCGTGGCTTCAAAACCGTaGGAGGCTTATTGTTCTCTCGTGATGCTTCTAGGGTTATATCCC | + |
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Preference number: 1 (lower is better) Translates to: SFACHLHRLCVASKP*EAYCSLVMLLGLYP Trigger: GGGATATAACCCTAGAAGCATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR TCA 90 bp | GACGTCATCACAATGGAAGGCATAAAAAGTGGAGTACATCAATGCTaGCACAGTCCAGTCCAGTCCACCAGGCAAGATGGTGCAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: DVITMEGIKSGVHQC*HSPVQSTRQDGARS Trigger: ACTTCTTGCACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCTTCCATTGTGATGACGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR GCA 90 bp | CTTCCCTTCCCTAAATGGCTAGCAGACATGGAAAACAGCCTGGGATaGATCCACACAGCTTTCTCCATGAGGCTATCAAATGTGTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LPFPKWLADMENSLG*IHTAFSMRLSNVLL Trigger: CAACAACACATTTGATAGCCTCATGGAGAAAGCTGTGTGGATGCATCCCAGGCTGTTTTCCATGTCTGCTAGCCATTTAGGGAAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR GCA 90 bp | CAACACTTATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTTaGGTGGCTTCAAAACCGTGCGAGGCTTATTGTTCTCTCGTGATG | + |
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Preference number: 1 (lower is better) Translates to: QHLFHLSFACHLHRL*VASKPCEAYCSLVM Trigger: CATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR TCA 90 bp | TCATCTACCACGTTACTTCCAGACGGAATTCCAGTCTACTGTGCCTaGACAGCGAGAAAAGTCAACTTGTCTACTTGGTATTTCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSTTLLPDGIPVYCA*TARKVNLSTWYFLR Trigger: CCTTAGGAAATACCAAGTAGACAAGTTGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCGTCTGGAAGTAACGTGGTAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR TCA 90 bp | GAGAAAAGTCAACTTGTCTACTTGGTATTTCCTAAGGCAAAGAAATaGAGCACTGGAAGAAGACTTCAGAGTGAAGCTCCTCAACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: EKSQLVYLVFPKAKK*STGRRLQSEAPQLW Trigger: CCACAGTTGAGGAGCTTCACTCTGAAGTCTTCTTCCAGTGCTTCATTTCTTTGCCTTAGGAAATACCAAGTAGACAAGTTGACTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR TCA 90 bp | CTCTTAACAGTCATGTATATTCAAACACATGGACGCACAGAACCATaGTCCTCTCCCAGGCTCCATGGAAAAGAACACTCGTTAAAAATA | + |
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Preference number: 1 (lower is better) Translates to: LLTVMYIQTHGRTEP*SSPRLHGKEHSLKI Trigger: TATTTTTAACGAGTGTTCTTTTCCATGGAGCCTGGGAGAGGATCATGGTTCTGTGCGTCCATGTGTTTGAATATACATGACTGTTAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR TCA 90 bp | GTGGCTCAAAGCCAAACCATAGGAATGCCACTATCCCAAAGGATATaGGAAATTATCCCATCAAAACTTTGTATTGTGGATCCTTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: VAQSQTIGMPLSQRI*EIIPSKLCIVDPSR Trigger: TCTAGAAGGATCCACAATACAAAGTTTTGATGGGATAATTTCTCATATCCTTTGGGATAGTGGCATTCCTATGGTTTGGCTTTGAGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGGCAAGGGTGAGAGATaGAGGGAAGAGTCCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RHKKWSTSMLTQSSPVHQGKGER*REESRR Trigger: CCTCCTGGACTCTTCCCTCCATCTCTCACCCTTGCC...CTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | AATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGAAATATTCTCCGTGGACTaGCTTCCACCATTAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: NTPPPRQGGKGKGERWREIFSVD*LPPLDP Trigger: TGGATCTAATGGTGGAAGCCAGTCCACGGAGAATAT...TTCCCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGACACAGCTTTCTCCATaGGGCTATCAAATGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: LNTPPPRQGGKGKGERWRTQLSP*GYQMCC Trigger: ACAACACATTTGATAGCCTCATGGAGAAAGCTGTGT...CCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | AATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGAATATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: NTPPPRQGGKGKGERWREYSPLL*DWILFS Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...TTCCCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | ACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGATGGTGCAAGAAGTGTAGGATCCAGTCATaGCAACACTGTCAGACCCAT | + |
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Preference number: 2 (lower is better) Translates to: TSMLTQSSPVHQARWCKKCRIQS*QHCQTH Trigger: ATGGGTCTGACAGTGTTGTCATGACTGGATCCTACA...CTTCTTGCACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTGCACAGACTTTGCGTaGCTTCAAAACCGTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: ERGATMDRSLIGMNARFNCTDFA*LQNRAR Trigger: CCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCA...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR CAA 90 bp | GGATGCATCCACACAGCTTTCTCCATGAGGCTATCAAATGTGTTGTaGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGA | + |
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Preference number: 2 (lower is better) Translates to: GCIHTAFSMRLSNVL*NGTLSNTGKGRHNG Trigger: TCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCAACAACACATTTGATAGCCTCATGGAGAAAGCTGTGTGGATGCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR CAA 90 bp | CTGGGATGCATCCACACAGCTTTCTCCATGAGGCTATCAAATGTGTaGTTGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: LGCIHTAFSMRLSNV*LNGTLSNTGKGRHN Trigger: ATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCAACAACACATTTGATAGCCTCATGGAGAAAGCTGTGTGGATGCATCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR CAA 90 bp | CCACTTGCACAGACTTTGCGTGGCTTCAAAACCGTGCGAGGCTTATaGTTCTCTCGTGATGCTTCTAGGGTTATATCCCGCTTTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PLAQTLRGFKTVRGL*FSRDASRVISRFVF Trigger: GAACACAAAGCGGGATATAACCCTAGAAGCATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGCTTTCGCTTGCCACTTaGACAGACTTTGCGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RHKKWSTSMLTQSSPVHQLSLAT*TDFAWL Trigger: AAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...CTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG | + |
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Preference number: 2 (lower is better) Translates to: RGATMDRSLIGMNARFNYHTVKH*KGAPQW Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | AATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGAAAAATGTGTTGTTGAATaGCACACTGTCAAACACTGG | + |
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Preference number: 2 (lower is better) Translates to: NTPPPRQGGKGKGERWREKCVVE*HTVKHW Trigger: CCAGTGTTTGACAGTGTGCCATTCAACAACACATTT...TTCCCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGAGGTATTCATGTACCTaGTATGTCTCCACGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RHKKWSTSMLTQSSPVHQRYSCT*YVSTGL Trigger: CAGGCCCGTGGAGACATACCAGGTACATGAATACCT...CTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATGAAAACAGCCTGGGATaGATCCACACAGCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RGATMDRSLIGMNARFNYENSLG*IHTAFS Trigger: GGAGAAAGCTGTGTGGATGCATCCCAGGCTGTTTTC...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR GCA 90 bp | AATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGAACATTGTATTCTCCTCTaGTATGAGACTGGATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTPPPRQGGKGKGERWREHCILL*YETGFC Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATACAATG...TTCCCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGATCCATGGGCCTAAATACGGGCACCCGTAGCGTAGTGACTGTAGTAGGAGCTCTTGTTGAAAGATaGCAACTCTCCCACCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: IRSMGLNTGTRSVVTVVGALVER*QLSHLY Trigger: ATAAAGGTGGGAGAGTTGTCATCTTTCAACAAGAGC...TCCTACTACAGTCACTACGCTACGGGTGCCCGTATTTAGGCCCATGGATCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTTCTCCTGCTCTTGTTaGAAGATGACAACTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ERGATMDRSLIGMNARFNFSCSC*KMTTLP Trigger: TGGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAA...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGACTTCAGAGTGAAGCTCCTCAACTGTGGTTCTCATTGACAGCAACTTTGGAAAACAGCCTGGGATaGATCCACACAGCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RRLQSEAPQLWFSLTATLENSLG*IHTAFS Trigger: GGAGAAAGCTGTGTGGATGCATCCCAGGCTGTTTTC...CAAAGTTGCTGTCAATGAGAACCACAGTTGAGGAGCTTCACTCTGAAGTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | CGTTACTTCCAGACGGAATTCCAGTCTACTGTGCCTGAACAGCGAGAAAAGTCACTTCCCTTCCCTAAATaGCTAGCAGACATGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: RYFQTEFQSTVPEQREKSLPFPK*LADMEN Trigger: GTTTTCCATGTCTGCTAGCCATTTAGGGAAGGGAAG...TGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCGTCTGGAAGTAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACAGGCAAGGGTGAGAGATaGAGGGAAGAGTCCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVPNIPLENQKTYLWQSTGKGER*REESRR Trigger: CCTCCTGGACTCTTCCCTCCATCTCTCACCCTTGCC...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGTCCACCAGGCAAGATaGTGCAAGAAGTCATTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RHKKWSTSMLTQSSPVHQVHQAR*CKKSLN Trigger: ATTTAATGACTTCTTGCACCATCTTGCCTGGTGGAC...CTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR CAA 90 bp | TCAACACTTATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTaGCGTGGCTTCAAAACCGTGCGAGGCTTATTGTTCTCTCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: STLISSFFRLPLAQT*RGFKTVRGLLFSRD Trigger: ATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | CGTTACTTCCAGACGGAATTCCAGTCTACTGTGCCTGAACAGCGAGAAAAGTCAGCCATTTCTAGACTGTaGACTCTTAACAGTCATGTA | + |
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Preference number: 2 (lower is better) Translates to: RYFQTEFQSTVPEQREKSAISRL*TLNSHV Trigger: TACATGACTGTTAAGAGTTCACAGTCTAGAAATGGC...TGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCGTCTGGAAGTAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGAAATGTGTTGTTGAATaGCACACTGTCAAACACTGG | + |
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Preference number: 2 (lower is better) Translates to: RHKKWSTSMLTQSSPVHQKCVVE*HTVKHW Trigger: CCAGTGTTTGACAGTGTGCCATTCAACAACACATTT...CTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACGGAAGGCATAAAAAGTaGAGTACATCAATGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: ERGATMDRSLIGMNARFNGRHKK*STSMLT Trigger: TGTCAGCATTGATGTACTCCACTTTTTATGCCTTCC...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | CGTCATCACAATGGAAGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCGTCCACCAGGCAAGATaGTGCAAGAAGTCATTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RHHNGRHKKWSTSMLTQSVHQAR*CKKSLN Trigger: ATTTAATGACTTCTTGCACCATCTTGCCTGGTGGAC...GGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCTTCCATTGTGATGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATTATCAAATGTGTTGTTaGATGGCACACTGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RGATMDRSLIGMNARFNYYQMCC*MAHCQT Trigger: TGTTTGACAGTGTGCCATTCAACAACACATTTGATA...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCCCATCAAAACTTTGTATTGTGGATCCTTCTAGATTCGCAACTATACAAGCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG | + |
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Preference number: 2 (lower is better) Translates to: LSHQNFVLWILLDSQLYKHTVKH*KGAPQW Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...CTTGTATAGTTGCGAATCTAGAAGGATCCACAATACAAAGTTTTGATGGGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATCAGATTGTTTGTAGTTaGTACAGCAATGATGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RGATMDRSLIGMNARFNYQIVCS*YSNDVF Trigger: GAAAACATCATTGCTGTAGCAACTACAAACAATCTG...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCATCACCGTACCTTTAAAAGCTTGTCCCGAATATACCTTTGGAAAACCAAACTCTCCCAGGCTCCATaGAAAAGAACACTCGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: MHHRTFKSLSRIYLWKTKLSQAP*KRTLVK Trigger: TTTAACGAGTGTTCTTTTCCATGGAGCCTGGGAGAG...TTTGGTTTTCCAAAGGTATATTCGGGACAAGCTTTTAAAGGTACGGTGATGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACACCTAAGGCAAAGAAATaGAGCACTGGAAGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LVPNIPLENQKTYLWQSTPKAKK*STGRRL Trigger: AAGTCTTCTTCCAGTGCTTCATTTCTTTGCCTTAGG...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | GTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCGAAGCTCCTCAACTGTaGTTCTCATTGACAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: VSMAKYNSVIPQQLVQNSEAPQL*FSLTAT Trigger: AGTTGCTGTCAATGAGAACCACAGTTGAGGAGCTTC...GCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR-3UTR CCA 90 bp | ATAGGTATGAATGCTAGATTCAACTATCTCACTAAGCAGGAAGTGGCTCCTCTGCAAGTTATAGCCTTCTaGTCTTTTGTCTCTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: IGMNARFNYLTKQEVAPLQVIAF*SFVSFT Trigger: AGTGAAAGAGACAAAAGACCAGAAGGCTATAACTTG...CAGAGGAGCCACTTCCTGCTTAGTGAGATAGTTGAATCTAGCATTCATACCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACATATCAAATGTGTTGTTaGATGGCACACTGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: LVPNIPLENQKTYLWQSTYQMCC*MAHCQT Trigger: TGTTTGACAGTGTGCCATTCAACAACACATTTGATA...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| 3UTR CCA 72 bp | TCCTGCAGGACTGACCACGGTCCATCCCACACTAACTaGGACACTCTCCATCTTTGGCTAGGGCCTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SCRTDHGPSHTN*DTLHLWLGPQH Trigger: GTGCTGAGGCCCTAGCCAAAGATGGAGAGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTTCCTGCAGGACTGACCACGGTCCATCCCACACTAACTGGGACACTCTCCGTGCTTACGCAGCTGTaGCAGTCCATGCATCACCGT | + |
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Preference number: 3 (lower is better) Translates to: KLPAGLTTVHPTLTGTLSVLTQL*QSMHHR Trigger: ACGGTGATGCATGGACTGCAACAGCTGCGTAAGCAC...GGAGAGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| 3UTR CCA 72 bp | GCCTCAGCACTGGAACACTGTGGATCATCACACATCTaGTGCTTACGCAGCTGTTGCAGTCCATGCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: ASALEHCGSSHI*CLRSCCSPCIT Trigger: GGTGATGCATGGACTGCAACAGCTGCGTAAGCACCAGATGTGTGATGATCCACAGTGTTCCAGTGCTGAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGATGGTGCAAGAAGCCACTTGCACAGACTTaGCGTGGCTTCAAAACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSMLTQSSPVHQARWCKKPLAQT*RGFKTV Trigger: CACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGG...CTTCTTGCACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR GCA 72 bp | TGCCACTTGCACAGACTTTGCGTGGCTTCAAAACCGTaGGAGGCTTATTGTTCTCTCGTGATGCTTCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CHLHRLCVASKP*EAYCSLVMLLG Trigger: CCCTAGAAGCATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGTTTGTTCTCCTGCTCTaGTTGAAAGATGACAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LNTPPPRQGGKGKGERWRFVLLL*LKDDNS Trigger: AGAGTTGTCATCTTTCAACAAGAGCAGGAGAACAAA...CCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGATGGTGCAAGAAGTCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TSMLTQSSPVHQARWCKKSSFFR*PLAQTL Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...CTTCTTGCACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR CCA 72 bp | ATCTTTCTTTCGCTTGCCACTTGCACAGACTTTGCGTaGCTTCAAAACCGTGCGAGGCTTATTGTTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: IFLSLATCTDFA*LQNRARLIVLS Trigger: CGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACGGGTTATATCCCGCTTaGTGTTCCTGTCGAACATTC | + |
|
Preference number: 3 (lower is better) Translates to: ERGATMDRSLIGMNARFNGLYPA*CSCRTF Trigger: GAATGTTCGACAGGAACACAAAGCGGGATATAACCC...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTTCGTTCTTCCTTTTTaGAATACGCCACCACCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERGATMDRSLIGMNARFNFVLPF*NTPPPR Trigger: TCTCGGTGGTGGCGTATTCAAAAAAGGAAGAACGAA...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATGTTCTCCTGCTCTTGTaGAAAGATGACAACTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RGATMDRSLIGMNARFNYVLLLL*KDDNSP Trigger: GGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAAC...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR TCA 72 bp | ACAATGGAAGGCATAAAAAGTGGAGTACATCAATGCTaGCACAGTCCAGTCCAGTCCACCAGGCAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TMEGIKSGVHQC*HSPVQSTRQDG Trigger: ACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCTTCCATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR GCA 72 bp | CCTAAATGGCTAGCAGACATGGAAAACAGCCTGGGATaGATCCACACAGCTTTCTCCATGAGGCTATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PKWLADMENSLG*IHTAFSMRLSN Trigger: ATTTGATAGCCTCATGGAGAAAGCTGTGTGGATGCATCCCAGGCTGTTTTCCATGTCTGCTAGCCATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR GCA 72 bp | GTCAACACTTATTTCATCTTTCTTTCGCTTGCCACTTaGACAGACTTTGCGTGGCTTCAAAACCGTGCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VNTYFIFLSLAT*TDFAWLQNRAR Trigger: CCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR CCA 72 bp | AGCTTTCTCCATGAGGCTATCAAATGTGTTGTTGAATaGCACACTGTCAAACACTGGAAAGGGGCGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SFLHEAIKCVVE*HTVKHWKGAPQ Trigger: TTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCAACAACACATTTGATAGCCTCATGGAGAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACAGGCTATCAAATGTGTaGTTGAATGGCACACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ERGATMDRSLIGMNARFNRLSNV*LNGTLS Trigger: TGACAGTGTGCCATTCAACAACACATTTGATAGCCT...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR TCA 72 bp | TGCAGTCGTTTTCATACAGTGAGCAAAGTTTACTTCTaGGGTATTCATGTACCTGGTATGTCTCCACGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CSRFHTVSKVYF*GIHVPGMSPRA Trigger: GGCCCGTGGAGACATACCAGGTACATGAATACCTCAGAAGTAAACTTTGCTCACTGTATGAAAACGACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR GCA 72 bp | TTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTTaGGTGGCTTCAAAACCGTGCGAGGCTTATTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FHLSFACHLHRL*VASKPCEAYCS Trigger: AGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGACTATCAAATGTGTTGTaGAATGGCACACTGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KKWSTSMLTQSSPVHQARLSNVL*NGTLSN Trigger: GTTTGACAGTGTGCCATTCAACAACACATTTGATAG...TCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATAGGCTATCAAATGTGTaGTTGAATGGCACACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGATMDRSLIGMNARFNYRLSNV*LNGTLS Trigger: TGACAGTGTGCCATTCAACAACACATTTGATAGCCT...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCATCACAATGGAAGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCTTCGTTCTTCCTTTTTaGAATACGCCACCACCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RHHNGRHKKWSTSMLTQSFVLPF*NTPPPR Trigger: TCTCGGTGGTGGCGTATTCAAAAAAGGAAGAACGAA...GGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCTTCCATTGTGATGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR CCA 72 bp | ACTGGAAGAAGACTTCAGAGTGAAGCTCCTCAACTGTaGTTCTCATTGACAGCAACTTTGTTAACAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGRRLQSEAPQL*FSLTATLLTDK Trigger: TTTATCTGTTAACAAAGTTGCTGTCAATGAGAACCACAGTTGAGGAGCTTCACTCTGAAGTCTTCTTCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACACAACTGTGGTTCTCATaGACAGCAACTTTGTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: LVPNIPLENQKTYLWQSTQLWFS*TATLLT Trigger: TGTTAACAAAGTTGCTGTCAATGAGAACCACAGTTG...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| 3UTR-3UTR CAA 90 bp | AGACGTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAAAGTCAACTTGTCTACTaGGTATTTCCTAAGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRIYGKVQFSDSTAISTKSQLVY*VFPKAK Trigger: CTTTGCCTTAGGAAATACCAAGTAGACAAGTTGACT...TTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATACGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| 3UTR CCA 72 bp | GGATATGAGAAATTATCCCATCAAAACTTTGTATTGTaGATCCTTCTAGATTCGCAACTATACAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GYEKLSHQNFVL*ILLDSQLYKPK Trigger: CTTTGGCTTGTATAGTTGCGAATCTAGAAGGATCCACAATACAAAGTTTTGATGGGATAATTTCTCATATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCCTGCAGGACTGACCACGGTCCATCCCACACTAACTGGGACACTCTCCACGTGTTACAGCTGTTaGGGTGAAATTCTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPAGLTTVHPTLTGTLSTCYSC*GEILQP Trigger: CGGCTGCAGAATTTCACCCCAACAGCTGTAACACGT...GGAGAGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR CCA 90 bp | AATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGAATGCACAGACTTTGCGTaGCTTCAAAACCGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTPPPRQGGKGKGERWRECTDFA*LQNRAR Trigger: CCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCA...TTCCCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR CCA 90 bp | GTCCATTCTCTCTCCATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACAGATAAGTGTGGGCGTTaGCAAATATTCTCCGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHSLSIKLPAGLTTVHPTDKCGR*QIFSVD Trigger: GTCCACGGAGAATATTTGCCAACGCCCACACTTATC...TGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATGGAGAGAGAATGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR TCA 90 bp | TTGAATACGCCACCACCGAGACAAGGTGGAAAGGGCAAGGGTGAGAGATGGAGGGCTCTTGTTGAAAGATaGCAACTCTCCCACCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTPPPRQGGKGKGERWRALVER*QLSHLY Trigger: ATAAAGGTGGGAGAGTTGTCATCTTTCAACAAGAGC...CCTCCATCTCTCACCCTTGCCCTTTCCACCTTGTCTCGGTGGTGGCGTATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCTAGGGCCTCAGCACTGGAACACTGTGGATCATCACACATCTGGTGCTATATTCTCCGTGGACTaGCTTCCACCATTAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLGPQHWNTVDHHTSGAIFSVD*LPPLDP Trigger: TGGATCTAATGGTGGAAGCCAGTCCACGGAGAATAT...AGCACCAGATGTGTGATGATCCACAGTGTTCCAGTGCTGAGGCCCTAGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR CCA 90 bp | CATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACACTAACTGGGACACTATATTCTCCGTGGACTaGCTTCCACCATTAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKASCRTDHGPSHTNWDTIFSVD*LPPLDP Trigger: TGGATCTAATGGTGGAAGCCAGTCCACGGAGAATAT...AGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGTGGAGTACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGATTAATCCCAGCACTCTaGGAGGCAGAGCAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKWSTSMLTQSSPVHQARLIPAL*EAEQAL Trigger: CAGAGCTTGCTCTGCCTCCCAGAGTGCTGGGATTAA...TCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGTACTCCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR CAA 72 bp | CAGACTTTGCGTGGCTTCAAAACCGTGCGAGGCTTATaGTTCTCTCGTGATGCTTCTAGGGTTATATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLRGFKTVRGL*FSRDASRVISR Trigger: GCGGGATATAACCCTAGAAGCATCACGAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR CAA 72 bp | CTGTGGATCATCACACATCTGGTGCTTACGCAGCTGTaGCAGTCCATGCATCACCGTACCTTTAAAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWIITHLVLTQL*QSMHHRTFKSL Trigger: CAAGCTTTTAAAGGTACGGTGATGCATGGACTGCAACAGCTGCGTAAGCACCAGATGTGTGATGATCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR TCA 90 bp | GTCCATTCTCTCTCCATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACAGTCGTTTTCATACAGTaGGCAAAGTTTACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSLSIKLPAGLTTVHPTVVFIQ*AKFTSE Trigger: CTCAGAAGTAAACTTTGCTCACTGTATGAAAACGAC...TGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATGGAGAGAGAATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATAGGTATTCATGTACCTaGTATGTCTCCACGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGATMDRSLIGMNARFNYRYSCT*YVSTGL Trigger: CAGGCCCGTGGAGACATACCAGGTACATGAATACCT...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR CCA 90 bp | CGTCATCACAATGGAAGGCATAAAAAGTGGAGTACATCAATGCTGACACAGTCCAGGCAGAGCAAGCTCTaGAATAGCCAGGACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHHNGRHKKWSTSMLTQSRQSKL*NSQDCS Trigger: ACTGCAGTCCTGGCTATTCCAGAGCTTGCTCTGCCT...GGACTGTGTCAGCATTGATGTACTCCACTTTTTATGCCTTCCATTGTGATGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| CDS-3UTR GCA 90 bp | CGGAATTCCAGTCTACTGTGCCTGAACAGCGAGAAAAGTCAACTTGTCTACTTGGTGGCTTCAAAACCGTaGGAGGCTTATTGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNSSLLCLNSEKSQLVYLVASKP*EAYCSL Trigger: GAGAGAACAATAAGCCTCGCACGGTTTTGAAGCCAC...CAAGTAGACAAGTTGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR CCA 90 bp | CATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACACTAACTGGGACACTCAAGTTATAGCCTTCTaGTCTTTTGTCTCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HKASCRTDHGPSHTNWDTQVIAF*SFVSFT Trigger: AGTGAAAGAGACAAAAGACCAGAAGGCTATAACTTG...AGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR GCA 90 bp | GTCCATTCTCTCTCCATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACATGTAGAAATTATATCTaGTTCTGCTACGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VHSLSIKLPAGLTTVHPTCRNYI*FCYVII Trigger: GATGATGACGTAGCAGAAGCAGATATAATTTCTACA...TGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATGGAGAGAGAATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTATCATCTTTCTTTCGCTTaGCACTTGCACAGACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGATMDRSLIGMNARFNYHLSFA*HLHRLC Trigger: GCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATG...ATAGTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| 3UTR CAA 72 bp | ATCCACACAGCTTTCTCCATGAGGCTATCAAATGTGTaGTTGAATGGCACACTGTCAAACACTGGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHTAFSMRLSNV*LNGTLSNTGKG Trigger: CCCCTTTCCAGTGTTTGACAGTGTGCCATTCAACAACACATTTGATAGCCTCATGGAGAAAGCTGTGTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225251.2 |
||
| 3UTR CAA 72 bp | ATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTaGCGTGGCTTCAAAACCGTGCGAGGCTTATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSFFRLPLAQT*RGFKTVRGLLF Trigger: GAACAATAAGCCTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| 3UTR CAA 72 bp | TGTCAACACTTATTTCATCTTTCTTTCGCTTGCCACTaGCACAGACTTTGCGTGGCTTCAAAACCGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQHLFHLSFACH*HRLCVASKPCE Trigger: CTCGCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| CDS-3UTR TCA 90 bp | CGGAATTCCAGTCTACTGTGCCTGAACAGCGAGAAAAGTCAACTTGTCTACTTGTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNSSLLCLNSEKSQLVYLYSPLL*DWILFS Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...CAAGTAGACAAGTTGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACGTCGTTTTCATACAGTaGGCAAAGTTTACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERGATMDRSLIGMNARFNVVFIQ*AKFTSE Trigger: CTCAGAAGTAAACTTTGCTCACTGTATGAAAACGAC...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR GCA 90 bp | ATAGGTATGAATGCTAGATTCAACTATCTCACTAAGCAGGAAGTGGCTCCTCTGTGCAGTGAACCCTTCTaGTACGTCATCATCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGMNARFNYLTKQEVAPLCSEPF*YVIIYC Trigger: GCAGTAGATGATGACGTAGCAGAAGGGTTCACTGCA...CAGAGGAGCCACTTCCTGCTTAGTGAGATAGTTGAATCTAGCATTCATACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
||
| CDS-3UTR GCA 90 bp | CATGGAAAACAGCCTGGGATGCATCCACACAGCTTTCTCCATGAGGCTATCAAACATTGTATTCTCCTCTaGTATGAGACTGGATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGKQPGMHPHSFLHEAIKHCILL*YETGFC Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATACAATG...TTTGATAGCCTCATGGAGAAAGCTGTGTGGATGCATCCCAGGCTGTTTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACACACTTGCACAGACTTTaGGTGGCTTCAAAACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPNIPLENQKTYLWQSTHLHRL*VASKPC Trigger: GCACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTG...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR GCA 90 bp | GAAAGGGGCGCCACAATGGACCGCTCTCTTATAGGTATGAATGCTAGATTCAACTGTAGAAATTATATCTaGTTCTGCTACGTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: ERGATMDRSLIGMNARFNCRNYI*FCYVII Trigger: GATGATGACGTAGCAGAAGCAGATATAATTTCTACA...GTTGAATCTAGCATTCATACCTATAAGAGAGCGGTCCATTGTGGCGCCCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CCA 90 bp | GTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCACGTGTTACAGCTGTTaGGGTGAAATTCTGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: VSMAKYNSVIPQQLVQNSTCYSC*GEILQP Trigger: CGGCTGCAGAATTTCACCCCAACAGCTGTAACACGT...GCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR TCA 90 bp | ATGCATCACCGTACCTTTAAAAGCTTGTCCCGAATATACCTTTGGAAAACCAAATTCTCCTGCTCTTGTTaGAAGATGACAACTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: MHHRTFKSLSRIYLWKTKFSCSC*KMTTLP Trigger: TGGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAA...TTTGGTTTTCCAAAGGTATATTCGGGACAAGCTTTTAAAGGTACGGTGATGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR TCA 90 bp | AAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCTCTTTAGTGCAGTGTAGGATCCAGTCATaGCAACACTGTCAGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: KYNSVIPQQLVQNSSLVQCRIQS*QHCQTH Trigger: ATGGGTCTGACAGTGTTGTCATGACTGGATCCTACA...CTGCACTAAAGAGCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR GCA 90 bp | TTATCCCATCAAAACTTTGTATTGTGGATCCTTCTAGATTCGCAACTATACAAGCTTTCGCTTGCCACTTaGACAGACTTTGCGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSHQNFVLWILLDSQLYKLSLAT*TDFAWL Trigger: AAGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...CTTGTATAGTTGCGAATCTAGAAGGATCCACAATACAAAGTTTTGATGGGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CCA 90 bp | AGACGTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAAAGGTATTCATGTACCTaGTATGTCTCCACGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RRIYGKVQFSDSTAISTKRYSCT*YVSTGL Trigger: CAGGCCCGTGGAGACATACCAGGTACATGAATACCT...TTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATACGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR GCA 90 bp | AGAAGACTTCAGAGTGAAGCTCCTCAACTGTGGTTCTCATTGACAGCAACTTTGCAGATTGTTTGTAGTTaGTACAGCAATGATGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RRLQSEAPQLWFSLTATLQIVCS*YSNDVF Trigger: GAAAACATCATTGCTGTAGCAACTACAAACAATCTG...CAAAGTTGCTGTCAATGAGAACCACAGTTGAGGAGCTTCACTCTGAAGTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR TCA 90 bp | AAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCTCTTTAGTGCATTCTCCTGCTCTTGTTaGAAGATGACAACTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KVQFSDSTAISTKQLFSAFSCSC*KMTTLP Trigger: TGGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAA...TGCACTAAAGAGCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR TCA 90 bp | TATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCTCTTTGCTCTTGTTGAAAGATaGCAACTCTCCCACCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: YGKVQFSDSTAISTKQLFALVER*QLSHLY Trigger: ATAAAGGTGGGAGAGTTGTCATCTTTCAACAAGAGC...AAAGAGCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CCA 90 bp | CTTGTCCCGAATATACCTTTGGAAAACCAAAAGACGTATCTATGGCAAAGTACACAAGTTATAGCCTTCTaGTCTTTTGTCTCTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: LVPNIPLENQKTYLWQSTQVIAF*SFVSFT Trigger: AGTGAAAGAGACAAAAGACCAGAAGGCTATAACTTG...TGTACTTTGCCATAGATACGTCTTTTGGTTTTCCAAAGGTATATTCGGGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR GCA 90 bp | TATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCTCTTTCATTGTATTCTCCTCTaGTATGAGACTGGATTTTGT | + |
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Preference number: 4 (lower is better) Translates to: YGKVQFSDSTAISTKQLFHCILL*YETGFC Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATACAATG...AAAGAGCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CAA 90 bp | CATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACACTAACTGGGACACTTCTTTCGCTTGCCACTaGCACAGACTTTGCGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: HKASCRTDHGPSHTNWDTSFACH*HRLCVA Trigger: AGCCACGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA...AGTGTCCCAGTTAGTGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CAA 90 bp | ACATCAATGCTGACACAGTCCAGTCCAGTCCACCAGGCAAGATGGTGCAAGAAGGGGTTATATCCCGCTTaGTGTTCCTGTCGAACATTC | + |
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Preference number: 5 (lower is better) Translates to: TSMLTQSSPVHQARWCKKGLYPA*CSCRTF Trigger: GAATGTTCGACAGGAACACAAAGCGGGATATAACCC...CTTCTTGCACCATCTTGCCTGGTGGACTGGACTGGACTGTGTCAGCATTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CAA 90 bp | CGGAATTCCAGTCTACTGTGCCTGAACAGCGAGAAAAGTCAACTTGTCTACTTGCCACTTGCACAGACTTaGCGTGGCTTCAAAACCGTG | + |
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Preference number: 5 (lower is better) Translates to: RNSSLLCLNSEKSQLVYLPLAQT*RGFKTV Trigger: CACGGTTTTGAAGCCACGCAAAGTCTGTGCAAGTGG...CAAGTAGACAAGTTGACTTTTCTCGCTGTTCAGGCACAGTAGACTGGAATTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CAA 90 bp | GTCCATTCTCTCTCCATAAAGCTTCCTGCAGGACTGACCACGGTCCATCCCACATTTGTTCTCCTGCTCTaGTTGAAAGATGACAACTCT | + |
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Preference number: 5 (lower is better) Translates to: VHSLSIKLPAGLTTVHPTFVLLL*LKDDNS Trigger: AGAGTTGTCATCTTTCAACAAGAGCAGGAGAACAAA...TGTGGGATGGACCGTGGTCAGTCCTGCAGGAAGCTTTATGGAGAGAGAATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CAA 90 bp | CTTTGGCTAGGGCCTCAGCACTGGAACACTGTGGATCATCACACATCTGGTGCTTTTGTTCTCCTGCTCTaGTTGAAAGATGACAACTCT | + |
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Preference number: 5 (lower is better) Translates to: LWLGPQHWNTVDHHTSGAFVLLL*LKDDNS Trigger: AGAGTTGTCATCTTTCAACAAGAGCAGGAGAACAAA...AGCACCAGATGTGTGATGATCCACAGTGTTCCAGTGCTGAGGCCCTAGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CAA 90 bp | GTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCGTTCTCCTGCTCTTGTaGAAAGATGACAACTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: VSMAKYNSVIPQQLVQNSVLLLL*KDDNSP Trigger: GGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAAC...GCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CAA 90 bp | TTATCCCATCAAAACTTTGTATTGTGGATCCTTCTAGATTCGCAACTATACAAGACCGTGCGAGGCTTATaGTTCTCTCGTGATGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LSHQNFVLWILLDSQLYKTVRGL*FSRDAS Trigger: AGAAGCATCACGAGAGAACAATAAGCCTCGCACGGT...CTTGTATAGTTGCGAATCTAGAAGGATCCACAATACAAAGTTTTGATGGGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS-3UTR CAA 90 bp | AAAAGACGTATCTATGGCAAAGTACAATTCAGTGATTCCACAGCAATTAGTACAGTTCTCCTGCTCTTGTaGAAAGATGACAACTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: KRRIYGKVQFSDSTAISTVLLLL*KDDNSP Trigger: GGGAGAGTTGTCATCTTTCAACAAGAGCAGGAGAAC...TGTACTAATTGCTGTGGAATCACTGAATTGTACTTTGCCATAGATACGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089230.7 ENSMUST00000225380.2 |
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| CDS-3UTR CAA 90 bp | AAAGTACAATTCAGTGATTCCACAGCAATTAGTACAAAACAGCTCTTTAGTGCATCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: KVQFSDSTAISTKQLFSASSFFR*PLAQTL Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...TGCACTAAAGAGCTGTTTTGTACTAATTGCTGTGGAATCACTGAATTGTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089230.7 |
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| CDS GCA 72 bp | TCTGGGAGGCAGAGCAAGCTCTGGAATAGCCAGGACTaGAGTGAACCCTTCTGCTACGTCATCATCTACTGC | + |
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Preference number: 6 (lower is better) Translates to: SGRQSKLWNSQD*SEPFCYVIIYC Trigger: GCAGTAGATGATGACGTAGCAGAAGGGTTCACTGCAGTCCTGGCTATTCCAGAGCTTGCTCTGCCTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225251.2 |
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| CDS GCA 72 bp | TACCACGTTACTTCCAGACGGAATTCCAGTCTACTGTaGCTGTCAGACCCATTCCAACAACATTCAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: YHVTSRRNSSLL*LSDPFQQHSNL Trigger: CAAATTTGAATGTTGTTGGAATGGGTCTGACAGGCACAGTAGACTGGAATTCCGTCTGGAAGTAACGTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225380.2 |
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