Pregenerated sensors for PPP2R1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007564Ensembl transcript IDs: ENSMUST00000007708.14, ENSMUST00000147983.3, ENSMUST00000173658.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAGCTTGGAGGCAGCGGCCCGCCGCACCATGGGGGTGTCATCTaGGCACAGGTTCCGGAAGTACTGTCGAAGTTCTGCCTTCACGGC | + |
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Preference number: 1 (lower is better) Translates to: PQLGGSGPPHHGGVI*AQVPEVLSKFCLHG Trigger: GCCGTGAAGGCAGAACTTCGACAGTACTTCCGGAACCTGTGCTCAGATGACACCCCCATGGTGCGGCGGGCCGCTGCCTCCAAGCTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 90 bp | GGCCTCCAGGTCCTCCTGTGGCAGAAGCTGGGCAATATTCACACATaGCTCCACTGCCAGCAGCCGCACCGAGTCCTGCTCGTCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: GLQVLLWQKLGNIHT*LHCQQPHRVLLVRG Trigger: GCCTCTGACGAGCAGGACTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGACCTGGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 90 bp | GTCCTCCTGTGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTaGCAGCAGCCGCACCGAGTCCTGCTCGTCAGAGGCCAGGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VLLWQKLGNIHTCLH*QQPHRVLLVRGQVR Trigger: TCTAACCTGGCCTCTGACGAGCAGGACTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR CCA 90 bp | AAGGTGGGCATCACTAAGGCCTCCAGGTCCTCCTGTGGCAGAAGCTaGGCAATATTCACACATGCCTCCACTGCCAGCAGCCGCACCGAG | + |
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Preference number: 1 (lower is better) Translates to: KVGITKASRSSCGRS*AIFTHASTASSRTE Trigger: CTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGACCTGGAGGCCTTAGTGATGCCCACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR CCA 90 bp | AGCACAGGTTCCGGAAGTACTGTCGAAGTTCTGCCTTCACGGCACTaGATACTCGGGGGTAGCAAACTGAGAAGAGACCACAGGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: STGSGSTVEVLPSRH*ILGGSKLRRDHRPR Trigger: CCTCGGCCTGTGGTCTCTTCTCAGTTTGCTACCCCCGAGTATCCAGTGCCGTGAAGGCAGAACTTCGACAGTACTTCCGGAACCTGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 90 bp | CAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTaGAACAACTTGTACTGCTCCAGCCCCTTGGGAGGTGGACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: QYGQEQPALLFRLLS*NNLYCSSPLGGGQR Trigger: TCTCTGTCCACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR GCA 90 bp | ATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTaGTGTCCTGCAACAACTTGTACTGCTCCAGCCCCTTGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: ISPNMGRNNQPFFSG*CPATTCTAPAPWEV Trigger: CACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAAATTCCCCCAGCTTGGAGGCAGCGGCCCGCCGCACCATGGGGGTGTCATCGGGGGTAGCAAACTaGGAAGAGACCACAGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: LANSPSLEAAARRTMGVSSGVAN*EETTGR Trigger: TCGGCCTGTGGTCTCTTCTCAGTTTGCTACCCCCGA...TGACACCCCCATGGTGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTGCCAGCAGCCGCACCCAAATTCCCCCAGCTTaGAGGCAGCGGCCCGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: CGRSWAIFTHASTASSRTQIPPA*RQRPAA Trigger: TGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTG...GGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCATTACAGCAGCAAAAGCCAGTGACCTAGGATGCTCCCATCTCTCCCAAGCTGGGGGAGGAGCCTaGGGTCAGACCATGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: VPITAAKASDLGCSHLSQAGGGA*GQTMHR Trigger: CCTGTGCATGGTCTGACCCCAGGCTCCTCCCCCAGC...TTGGGAGAGATGGGAGCATCCTAGGTCACTGGCTTTTGCTGCTGTAATGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR CAA 90 bp | TCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTaGGAGGGTGGACACCAGAGGCCGGCAATGCTTCTTCTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SFAPTTSLREVTLWG*EGGHQRPAMLLLPA Trigger: TGCTGGAAGAAGAAGCATTGCCGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTGCCAGCAGCCGCACCGACATGGGGGTGTCATCTaGGCACAGGTTCCGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: WQKLGNIHTCLHCQQPHRHGGVI*AQVPEV Trigger: TACTTCCGGAACCTGTGCTCAGATGACACCCCCATG...TCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCCACCATGTAGCGAACACGCCAAGACTTGTCCTCAGCAGCCTGTCGCAACCAGCTCCAGTACCTTaGCAAATTCCCCCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VGHHVANTPRLVLSSLSQPAPVP*QIPPAW Trigger: CCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGG...TTGCGACAGGCTGCTGAGGACAAGTCTTGGCGTGTTCGCTACATGGTGGCCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR CAA 90 bp | AACATGGGAATGATCTCACTCTTGACATTGTCCAGCTCCAGTACCTaGGCAAATTCCCCCAGCTTGGAGGCAGCGGCCCGCCGCACCATG | + |
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Preference number: 2 (lower is better) Translates to: NMGMISLLTLSSSST*ANSPSLEAAARRTM Trigger: CATGGTGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACAATGTCAAGAGTGAGATCATTCCCATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR GCA 90 bp | ACATTGTCCAGCTCCAGTACCTTGGCAAATTCCCCCAGCTTGGAGGCAGCGGCCGTACTGTCGAAGTTCTaGCTTCACGGCACTGGATAC | + |
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Preference number: 2 (lower is better) Translates to: TLSSSSTLANSPSLEAAAVLSKF*LHGTGY Trigger: GTATCCAGTGCCGTGAAGGCAGAACTTCGACAGTAC...GGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR GCA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTTGCAACAACTTGTACTaGTCCAGCCCCTTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: PISPNMGRNNQPFFSGCCCNNLY*SSPLGG Trigger: ACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCA...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAAGGGAGGTAACTTTGTaGGGGTTGGAGGGTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVREVTL*GLEGGH Trigger: GTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCT...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR CAA 90 bp | TCAGAGGCCAGGTTAGAGAACATGGGAATGATCTCACTCTTGACATaGTCCAGCTCCAGTACCTTGGCAAATTCCCCCAGCTTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SEARLENMGMISLLT*SSSSTLANSPSLEA Trigger: TGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACAATGTCAAGAGTGAGATCATTCCCATGTTCTCTAACCTGGCCTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGCAGCAAAAGCCAGTGACCTAGGATGCTCCCATCTCTCCCAATATGGGTTCAGGCTGCTGTCCTaGAACAACTTGTACTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ITAAKASDLGCSHLSQYGFRLLS*NNLYCS Trigger: GGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTGAA...CCCATATTGGGAGAGATGGGAGCATCCTAGGTCACTGGCTTTTGCTGCTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR TCA 72 bp | GGAGGCAGCGGCCCGCCGCACCATGGGGGTGTCATCTaGGCACAGGTTCCGGAAGTACTGTCGAAGTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GGSGPPHHGGVI*AQVPEVLSKFC Trigger: GCAGAACTTCGACAGTACTTCCGGAACCTGTGCTCAGATGACACCCCCATGGTGCGGCGGGCCGCTGCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR CCA 72 bp | TGTCCAGCTCCAGTACCTTGGCAAATTCCCCCAGCTTaGAGGCAGCGGCCCGCCGCACCATGGGGGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: CPAPVPWQIPPA*RQRPAAPWGCH Trigger: ATGACACCCCCATGGTGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGAACCGAACCGTGCTGGGGGAGGAGCCTGGGGTCAGACCATGCACAGGCTAAGGGAGGTAACTTaGTGGGGGTTGGAGGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: EEEPNRAGGGAWGQTMHRLREVT*WGLEGG Trigger: TCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAG...CCTGTGCATGGTCTGACCCCAGGCTCCTCCCCCAGCACGGTTCGGTTCCTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR GCA 72 bp | TGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTaGCAGCAGCCGCACCGAGTCCTGCTCGTCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: WQKLGNIHTCLH*QQPHRVLLVRG Trigger: GCCTCTGACGAGCAGGACTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 72 bp | GTCCTCCTGTGGCAGAAGCTGGGCAATATTCACACATaGCTCCACTGCCAGCAGCCGCACCGAGTCCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: VLLWQKLGNIHT*LHCQQPHRVLL Trigger: GAGCAGGACTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR TCA 72 bp | TGCCTTCACGGCACTGGATACTCGGGGGTAGCAAACTaGGAAGAGACCACAGGCCGAGGTGCGGGAGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CLHGTGYSGVAN*EETTGRGAGGE Trigger: TTCACCTCCCGCACCTCGGCCTGTGGTCTCTTCTCAGTTTGCTACCCCCGAGTATCCAGTGCCGTGAAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCGTAACTTTGTGGGGGTaGGAGGGTGGACACCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSQYGQEQPALLFRLLSCVTLWG*EGGHQR Trigger: CCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTAC...GCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTGATCTCAGGCCCCACTGCTTTCTGGAGCTCTGTGAACTTGTCGGCCACTCCAGCTCCAGTACCTaGGCAAATTCCCCCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGDLRPHCFLELCELVGHSSSST*ANSPSL Trigger: CAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGA...GTGGCCGACAAGTTCACAGAGCTCCAGAAAGCAGTGGGGCCTGAGATCACCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 72 bp | CTGGGGTCAGACCATGCACAGGGAGTGACAGTCATTTaGCCCCACCACCTCCCTAAGGGAGGTAACTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LGSDHAQGVTVI*PHHLPKGGNFV Trigger: CACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGCATGGTCTGACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR GCA 72 bp | AGGCACCAGATCTGTCTTGGTGATCTCAGGCCCCACTaGTTTCTGGAGCTCTGTGAACTTGTCGGCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: RHQICLGDLRPH*FLELCELVGHH Trigger: ATGGTGGCCGACAAGTTCACAGAGCTCCAGAAAGCAGTGGGGCCTGAGATCACCAAGACAGATCTGGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CAA 90 bp | CCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAATACTGCTCCAGCCCCTaGGGAGGTGGACAGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: PIWAGTTSPSFQAAVLQQYCSSP*GGGQRS Trigger: ACTTCTCTGTCCACCTCCCAAGGGGCTGGAGCAGTA...TTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR CCA 72 bp | TCCGGAAGTACTGTCGAAGTTCTGCCTTCACGGCACTaGATACTCGGGGGTAGCAAACTGAGAAGAGACCAC | + |
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Preference number: 3 (lower is better) Translates to: SGSTVEVLPSRH*ILGGSKLRRDH Trigger: GTGGTCTCTTCTCAGTTTGCTACCCCCGAGTATCCAGTGCCGTGAAGGCAGAACTTCGACAGTACTTCCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR-3UTR CAA 90 bp | GTGATCTCAGGCCCCACTGCTTTCTGGAGCTCTGTGAACTTGTCGGCCACCATGATCTCACTCTTGACATaGTCCAGCTCCAGTACCTTG | + |
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Preference number: 3 (lower is better) Translates to: VISGPTAFWSSVNLSATMISLLT*SSSSTL Trigger: CAAGGTACTGGAGCTGGACAATGTCAAGAGTGAGAT...CATGGTGGCCGACAAGTTCACAGAGCTCCAGAAAGCAGTGGGGCCTGAGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| 3UTR GCA 72 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTaGTGTCCTGCAACAACTTGTACTGCTCCAGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: NMGRNNQPFFSG*CPATTCTAPAP Trigger: AGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR CAA 72 bp | TTGTCCAGCTCCAGTACCTTGGCAAATTCCCCCAGCTaGGAGGCAGCGGCCCGCCGCACCATGGGGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSSSTLANSPS*EAAARRTMGVS Trigger: TGACACCCCCATGGTGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGCAAATTCCCCCAGCTTaGAGGCAGCGGCCCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TSLREVTLWGLEGGHQRPQIPPA*RQRPAA Trigger: TGCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTG...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR GCA 90 bp | ATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGCACACATGCCTCCACTaGCAGCAGCCGCACCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: ICPHHLPKGGNFVGVGGWHTCLH*QQPHRV Trigger: GACTCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTG...CCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CCA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGGCGGACATTGGCAACTaGGTCCCCTGCCATACGAAG | + |
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Preference number: 4 (lower is better) Translates to: TSLREVTLWGLEGGHQRPADIGN*VPCHTK Trigger: CTTCGTATGGCAGGGGACCCAGTTGCCAATGTCCGC...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR GCA 90 bp | ATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGACCTTGTGGGAGGCTaGGGCCCTCACCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ISPNMGRNNQPFFSGCCPDLVGG*GPHLGL Trigger: GAGGCCGAGGTGAGGGCCGCAGCCTCCCACAAGGTC...AGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR TCA 90 bp | GACCATGCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTCATGGGGGTGTCATCTaGGCACAGGTTCCGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: DHAQGVTVICPHHLPKGGHGGVI*AQVPEV Trigger: TACTTCCGGAACCTGTGCTCAGATGACACCCCCATG...ACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGCATGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR TCA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGCTCCCGGCAGTCAGCTaGGAGATTTTCACAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: TSLREVTLWGLEGGHQRPLPAVS*EIFTEL Trigger: GAGTTCTGTGAAAATCTCTCAGCTGACTGCCGGGAG...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR GCA 90 bp | CTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAGCCGCACCGAGTCCTaGTCGTCAGAGGCCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LSQYGQEQPALLFRLLSCSRTES*SSEARL Trigger: TAACCTGGCCTCTGACGAGCAGGACTCGGTGCGGCT...GCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGCAGGCACCAGATCTGTCTTGGTGATCTCAGGCCCCACTGCTTTCTGGCAGGAGCTCACTTCTaGTCCGTTCAACCCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LEGRHQICLGDLRPHCFLAGAHF*SVQPQG Trigger: CCCTTGGGGTTGAACGGACCAGAAGTGAGCTCCTGC...CAGAAAGCAGTGGGGCCTGAGATCACCAAGACAGATCTGGTGCCTGCCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCTGTCCTGCAACAACTTGTACTGCTCCAGCCCCTTGGGAGGTGGACACTCCCACCAAAGTTGTaGAGGTTCCCAGCTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QAAVLQQLVLLQPLGRWTLPPKL*RFPAVQ Trigger: CTGAACAGCTGGGAACCTTCACAACTTTGGTGGGAG...TGTCCACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR TCA 90 bp | GCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTTCGGGGGTAGCAAACTaGGAAGAGACCACAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: AQGVTVICPHHLPKGGNFSGVAN*EETTGR Trigger: TCGGCCTGTGGTCTCTTCTCAGTTTGCTACCCCCGA...AAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR TCA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGTCCTATCTTCTGGAGTaGCTTGGCCACATTGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: TSLREVTLWGLEGGHQRPSYLLE*LGHIEA Trigger: CGCTTCAATGTGGCCAAGTCACTCCAGAAGATAGGA...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CCA 90 bp | GTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGCAGGAGCTCACTTCTaGTCCGTTCAACCCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VTVICPHHLPKGGNFVGVAGAHF*SVQPQG Trigger: CCCTTGGGGTTGAACGGACCAGAAGTGAGCTCCTGC...AACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| 3UTR CAA 72 bp | ATGATCTCACTCTTGACATTGTCCAGCTCCAGTACCTaGGCAAATTCCCCCAGCTTGGAGGCAGCGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: MISLLTLSSSST*ANSPSLEAAAR Trigger: GCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGACAATGTCAAGAGTGAGATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTGCCAGCAGCCGCACCGACTATTGAGACGAAGCTaGACGTCCTCATTGCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQKLGNIHTCLHCQQPHRLLRRS*TSSLRS Trigger: ACTCCGCAATGAGGACGTTCAGCTTCGTCTCAATAG...TCGGTGCGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTCCTCCTGTGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTGCCAGCTCCCACCAAAGTTGTaGAGGTTCCCAGCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLWQKLGNIHTCLHCQLPPKL*RFPAVQ Trigger: CTGAACAGCTGGGAACCTTCACAACTTTGGTGGGAG...CTGGCAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
||
| CDS-3UTR GCA 90 bp | CCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAAGGTGGCAGCAGACAGTaGACATACTCAGGCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIWAGTTSPSFQAAVLQQGGSRQ*TYSGPP Trigger: GGGAGGGCCTGAGTATGTGCACTGTCTGCTGCCACC...TTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCTGTCCTGCAACAACTTGTACTGCTCCAGCCCCTTGGGAGGTGGACAGTACTGTCGAAGTTCTaGCTTCACGGCACTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QAAVLQQLVLLQPLGRWTVLSKF*LHGTGY Trigger: GTATCCAGTGCCGTGAAGGCAGAACTTCGACAGTAC...TGTCCACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGCCAGCTCCAGTACCTTaGCAAATTCCCCCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGVTVICPHHLPKGGNFVPAPVP*QIPPAW Trigger: CCAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGG...CACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | GACCATGCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTTCCTGTGGCAGAAGCTaGGCAATATTCACACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DHAQGVTVICPHHLPKGGSCGRS*AIFTHA Trigger: GGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGA...ACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGCATGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAGAGGCATGTATTCAATaGTGGCCAGCCGCACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVEACIQ*WPAALA Trigger: GGCGAGTGCGGCTGGCCATCATTGAATACATGCCTC...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCTGTCCTGCAACAACTTGTACTGCTCCAGCCCCTTGGGAGGTGGACAGGCTTGACTTCACTCTaGAGGGTGCTGTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAAVLQQLVLLQPLGRWTGLTSL*RVLLSR Trigger: TCTTGATAACAGCACCCTGCAGAGTGAAGTCAAGCC...TGTCCACCTCCCAAGGGGCTGGAGCAGTACAAGTTGTTGCAGGACAGCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAAACTCTTTGACCTTGTaGGAGGCTGCGGCCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVNSLTL*EAAALT Trigger: GGTGAGGGCCGCAGCCTCCCACAAGGTCAAAGAGTT...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAGGGATGATAGTGGCATaGGCCCACTCCTTCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVGMIVA*AHSFPN Trigger: GTTCGGGAAGGAGTGGGCCCATGCCACTATCATCCC...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCCTATTGAGACGAAGCTaGACGTCCTCATTGCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQYGQEQPALLFRLLSCLLRRS*TSSLRS Trigger: ACTCCGCAATGAGGACGTTCAGCTTCGTCTCAATAG...GCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | GTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGCAAGATCTGAGTCATaGTCACATTCTCCCGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVICPHHLPKGGNFVGVARSES*SHSPGS Trigger: ACTGCCGGGAGAATGTGATCATGACTCAGATCTTGC...AACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGAAGCCAGTGCTGACTTaGCATGTTGGTTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGVTVICPHHLPKGGNFVKPVLT*HVGWHL Trigger: CAGATGCCAACCAACATGTCAAGTCAGCACTGGCTT...CACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTACTGAGAGAGCTGCCTaGTGCCAATCACCTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PISPNMGRNNQPFFSGCCTERAA*CQSPRS Trigger: TGAACGAGGTGATTGGCATCAGGCAGCTCTCTCAGT...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR GCA 90 bp | CCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAAGGCAATATTCACACATaGCTCCACTGCCAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PIWAGTTSPSFQAAVLQQGNIHT*LHCQQP Trigger: CGGCTGCTGGCAGTGGAGGCATGTGTGAATATTGCC...TTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCGATGGTGTTGTCTTTaGCCAGAATGGGAGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PISPNMGRNNQPFFSGCCRWCCL*PEWERG Trigger: GCCTCTCTCCCATTCTGGGCAAAGACAACACCATCG...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCATACGAAGAACTGTaGGCAGCATGTGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PISPNMGRNNQPFFSGCCPYEEL*AACAWW Trigger: CCACCAAGCACATGCTGCCCACAGTTCTTCGTATGG...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTTTGACATCCACATCCTaGTCCTGGGTCAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PISPNMGRNNQPFFSGCCLTSTS*SWVSFS Trigger: GGAGAAGCTGACCCAGGACCAGGATGTGGATGTCAA...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTGAAGGTGAGTGCTCATaGGAGATGGCCCGCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMGRNNQPFFSGCCPATTEGECS*EMARKD Trigger: ATCCTTGCGGGCCATCTCTCATGAGCACTCACCTTC...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTATTTCACAGAACTCTTTaGCCTTGTGGGAGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVFHRTL*PCGRLR Trigger: CCGCAGCCTCCCACAAGGTCAAAGAGTTCTGTGAAA...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | GCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTATGCAGGGCAAGATCTaGGTCATGATCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQGVTVICPHHLPKGGNFMQGKI*VMITFS Trigger: GGAGAATGTGATCATGACTCAGATCTTGCCCTGCAT...AAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTACTGACACAAGCTCCTTaGTGCAGGGCAAGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVLTQAP*CRARSE Trigger: CTCAGATCTTGCCCTGCATCAAGGAGCTTGTGTCAG...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | GCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTATGTTGGTTGGCATCTaGCACAAGCTCCTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQGVTVICPHHLPKGGNFMLVGI*HKLLDA Trigger: TGCATCAAGGAGCTTGTGTCAGATGCCAACCAACAT...AAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTCACTCATCCTTCAGCTaGGCCAAGAACAGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NMGRNNQPFFSGCCPATTHSSFS*AKNRGK Trigger: CTTGCCCCTGTTCTTGGCTCAGCTGAAGGATGAGTG...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAGCATGTGCTTGGTGGTaGTATCCTGTCCACAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVACAWW*YPVHRP Trigger: AGGTCTGTGGACAGGATATCACCACCAAGCACATGC...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR GCA 90 bp | CCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAAGATCTCAGGCCCCACTaGTTTCTGGAGCTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIWAGTTSPSFQAAVLQQDLRPH*FLELCE Trigger: TTCACAGAGCTCCAGAAAGCAGTGGGGCCTGAGATC...TTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTCTGCCTTCACGGCACTaGATACTCGGGGGTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NMGRNNQPFFSGCCPATTLPSRH*ILGGSK Trigger: TTTGCTACCCCCGAGTATCCAGTGCCGTGAAGGCAG...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGCAAGAGGTGTTCGATaGTGTTGTCTTTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTVICPHHLPKGGNFVGVARGVR*CCLCPE Trigger: TTCTGGGCAAAGACAACACCATCGAACACCTCTTGC...AACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCAGCAAAAGCCAGTGACCTAGGATGCTCCCATCTCTCCCAATATGGGCAGCTAGTTCCACGATaGCAGGAAGCAGGGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITAAKASDLGCSHLSQYGQLVPR*QEAGTE Trigger: CTCAGTCCCTGCTTCCTGCCATCGTGGAACTAGCTG...CCCATATTGGGAGAGATGGGAGCATCCTAGGTCACTGGCTTTTGCTGCTGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTACAGTCAGAGCCTCCTaGGCAAAGTACTTGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPNMGRNNQPFFSGCCPTVRAS*AKYLTS Trigger: GGATGTCAAGTACTTTGCCCAGGAGGCTCTGACTGT...AGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCTGACTTGACATGTTaGTTGGCATCTGACACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPNMGRNNQPFFSGCCPADLTC*LASDTS Trigger: GCTTGTGTCAGATGCCAACCAACATGTCAAGTCAGC...AGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAATGGGTCCTATCTTCTaGAGTGACTTGGCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVMGPIF*SDLATL Trigger: CAATGTGGCCAAGTCACTCCAGAAGATAGGACCCAT...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAAATTCCCCCAGCTaGGAGGCAGCGGCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ISPNMGRNNQPFFSGCCPANSPS*EAAARR Trigger: GCGGCGGGCCGCTGCCTCCAAGCTGGGGGAATTTGC...AGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCCCCACCACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGCAGAACTCTTTGACCTaGTGGGAGGCTGCGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICPHHLPKGGNFVGVGGWQNSLT*WEAAAL Trigger: GAGGGCCGCAGCCTCCCACAAGGTCAAAGAGTTCTG...CCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGTGGTGGGGGCAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAACCGAACCGTGCTGGGGGAGGAGCCTGGGGTCAGACCATGCACAGGGACTTGACATGTTGGTaGGCATCTGACACAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEEPNRAGGGAWGQTMHRDLTCW*ASDTSS Trigger: GGAGCTTGTGTCAGATGCCAACCAACATGTCAAGTC...CCTGTGCATGGTCTGACCCCAGGCTCCTCCCCCAGCACGGTTCGGTTCCTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAACCGAACCGTGCTGGGGGAGGAGCCTGGGGTCAGACCATGCACAGGGAAGCCAGTGCTGACTaGACATGTTGGTTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: EEEPNRAGGGAWGQTMHREASAD*TCWLAS Trigger: AGATGCCAACCAACATGTCAAGTCAGCACTGGCTTC...CCTGTGCATGGTCTGACCCCAGGCTCCTCCCCCAGCACGGTTCGGTTCCTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGTTCTCCAGGATGGGCTaGACTTCACTCTGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLREVTLWGLEGGHQRPFSRMG*TSLCRV Trigger: CACCCTGCAGAGTGAAGTCAAGCCCATCCTGGAGAA...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGTCCTGGGCAAAGTACTaGACATCCACATCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLREVTLWGLEGGHQRPSWAKY*TSTSWS Trigger: GGACCAGGATGTGGATGTCAAGTACTTTGCCCAGGA...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS CCA 90 bp | GTCAGAGCCTCCTGGGCAAAGTACTTGACATCCACATCCTGGTCCTaGGTCAGCTTCTCCAGGATGGGCTTGACTTCACTCTGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRASWAKYLTSTSWS*VSFSRMGLTSLCRV Trigger: CACCCTGCAGAGTGAAGTCAAGCCCATCCTGGAGAAGCTGACCCAGGACCAGGATGTGGATGTCAAGTACTTTGCCCAGGAGGCTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | GACCATGCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTTCGATGGTGTTGTCTTaGCCCAGAATGGGAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DHAQGVTVICPHHLPKGGSMVLS*PRMGER Trigger: CCTCTCTCCCATTCTGGGCAAAGACAACACCATCGA...ACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGCATGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS CCA 90 bp | GCAAGGATTCTACCGCCTTGTCTCGCACTACTGTCTCTTCCACTGTaGCCAGTGACTCAAGGGGTGGCAGCAGACAGTGCACATACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARILPPCLALLSLPL*PVTQGVAADSAHTQ Trigger: CTGAGTATGTGCACTGTCTGCTGCCACCCCTTGAGTCACTGGCCACAGTGGAAGAGACAGTAGTGCGAGACAAGGCGGTAGAATCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | GTCCCCATTACAGCAGCAAAAGCCAGTGACCTAGGATGCTCCCATCTCTCCCAAAGCCGCACTCGCCACTaGGCATCTTCAGCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPITAAKASDLGCSHLSQSRTRH*ASSASS Trigger: GGAACTAGCTGAAGATGCCAAGTGGCGAGTGCGGCT...TTGGGAGAGATGGGAGCATCCTAGGTCACTGGCTTTTGCTGCTGTAATGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS CCA 90 bp | AGAACAGTCAGAGCCTCCTGGGCAAAGTACTTGACATCCACATCCTaGTCCTGGGTCAGCTTCTCCAGGATGGGCTTGACTTCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTVRASWAKYLTSTS*SWVSFSRMGLTSLC Trigger: GCAGAGTGAAGTCAAGCCCATCCTGGAGAAGCTGACCCAGGACCAGGATGTGGATGTCAAGTACTTTGCCCAGGAGGCTCTGACTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | ACCTCCCTAAGGGAGGTAACTTTGTGGGGGTTGGAGGGTGGACACCAGAGGCCGACCTCAGACAACACATaGATGCAGAAGAGTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLREVTLWGLEGGHQRPTSDNT*MQKSVV Trigger: GACTACACTCTTCTGCATCAATGTGTTGTCTGAGGT...CGGCCTCTGGTGTCCACCCTCCAACCCCCACAAAGTTACCTCCCTTAGGGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS GCA 90 bp | TTGGCAACTGGGTCCCCTGCCATACGAAGAACTGTGGGCAGCATGTaGTTGGTGGTGATATCCTGTCCACAGACCTCAGACAACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LATGSPAIRRTVGSM*LVVISCPQTSDNTL Trigger: CAATGTGTTGTCTGAGGTCTGTGGACAGGATATCACCACCAAGCACATGCTGCCCACAGTTCTTCGTATGGCAGGGGACCCAGTTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAGGTGTTCGATGGTGTaGTCTTTGCCCAGAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSQYGQEQPALLFRLLSCRCSMV*SLPRMG Trigger: TCCCATTCTGGGCAAAGACAACACCATCGAACACCT...GCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | GACCATGCACAGGGAGTGACAGTCATTTGCCCCCACCACCTCCCTAAGGGAGGTTTCACACAATCCAGGTaGGAGATGATATTCAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: DHAQGVTVICPHHLPKGGFTQSR*EMIFSR Trigger: CCGACTGAATATCATCTCCAACCTGGATTGTGTGAA...ACCTCCCTTAGGGAGGTGGTGGGGGCAAATGACTGTCACTCCCTGTGCATGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | CTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCACTAATTTCTTAAGGTaGCTGGTGGCAGCCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: LSQYGQEQPALLFRLLSCTNFLR*LVAASR Trigger: CCGTGAGGCTGCCACCAGCAACCTTAAGAAATTAGT...GCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTCCAGCTCCAGTACCTaGGCAAATTCCCCCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: NMGRNNQPFFSGCCPATTSSSST*ANSPSL Trigger: CAAGCTGGGGGAATTTGCCAAGGTACTGGAGCTGGA...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | CCCATCTCTCCCAATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTTTTTCACAGAACTCTTaGACCTTGTGGGAGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PISPNMGRNNQPFFSGCCFSQNS*TLWEAA Trigger: CGCAGCCTCCCACAAGGTCAAAGAGTTCTGTGAAAA...ACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATTGGGAGAGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGTCCTCCTGTGGCAGAAGCTGGGCAATATTCACACATGCCTCCACTGATTGTGGAGAGCTTCTaGATACTATTGAGACGAAGC | + |
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Preference number: 5 (lower is better) Translates to: PPGPPVAEAGQYSHMPPLIVESF*ILLRRS Trigger: GCTTCGTCTCAATAGTATCAAGAAGCTCTCCACAAT...CAGTGGAGGCATGTGTGAATATTGCCCAGCTTCTGCCACAGGAGGACCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173658.8 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTTGTAGGAATGATCTCACTCTaGACATTGTCCAGCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: WAGTTSPSFQAAVLQQLVGMISL*TLSSSS Trigger: ACTGGAGCTGGACAATGTCAAGAGTGAGATCATTCC...TACAAGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTAGTGACTTGGCCACATaGAAGCGGACATTGGCAACT | + |
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Preference number: 5 (lower is better) Translates to: NMGRNNQPFFSGCCPATTSDLAT*KRTLAT Trigger: AGTTGCCAATGTCCGCTTCAATGTGGCCAAGTCACT...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CCA 90 bp | TTAGGGTCTCCAGACATGGCTAAGACCTTGGGGATGATAGTGGCATaGGCCCACTCCTTCCCGAACTTCTCTACTAATTTCTTAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LGSPDMAKTLGMIVA*AHSFPNFSTNFLRL Trigger: CAACCTTAAGAAATTAGTAGAGAAGTTCGGGAAGGAGTGGGCCCATGCCACTATCATCCCCAAGGTCTTAGCCATGTCTGGAGACCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | GTCCCCATTACAGCAGCAAAAGCCAGTGACCTAGGATGCTCCCATCTCTCCCAAATTGTGGAGAGCTTCTaGATACTATTGAGACGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VPITAAKASDLGCSHLSQIVESF*ILLRRS Trigger: GCTTCGTCTCAATAGTATCAAGAAGCTCTCCACAAT...TTGGGAGAGATGGGAGCATCCTAGGTCACTGGCTTTTGCTGCTGTAATGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS-3UTR CAA 90 bp | AATATGGGCAGGAACAACCAGCCCTTCTTTTCAGGCTGCTGTCCTGCAACAACTATCTCACTCTTGACATaGTCCAGCTCCAGTACCTTG | + |
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Preference number: 5 (lower is better) Translates to: NMGRNNQPFFSGCCPATTISLLT*SSSSTL Trigger: CAAGGTACTGGAGCTGGACAATGTCAAGAGTGAGAT...AGTTGTTGCAGGACAGCAGCCTGAAAAGAAGGGCTGGTTGTTCCTGCCCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CCA 72 bp | CTACCGCCTTGTCTCGCACTACTGTCTCTTCCACTGTaGCCAGTGACTCAAGGGGTGGCAGCAGACAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LPPCLALLSLPL*PVTQGVAADSA Trigger: TGCACTGTCTGCTGCCACCCCTTGAGTCACTGGCCACAGTGGAAGAGACAGTAGTGCGAGACAAGGCGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS GCA 72 bp | GAGATTTTCACAGAACTCTTTGACCTTGTGGGAGGCTaGGGCCCTCACCTCGGCCTCACAGTCCTTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: EIFTELFDLVGG*GPHLGLTVLHQ Trigger: CTGATGAAGGACTGTGAGGCCGAGGTGAGGGCCGCAGCCTCCCACAAGGTCAAAGAGTTCTGTGAAAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CAA 90 bp | CCCAGAATGGGAGAGAGGCCCATGATGACTGAAGCCAGTGCTGACTaGACATGTTGGTTGGCATCTGACACAAGCTCCTTGATGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PRMGERPMMTEASAD*TCWLASDTSSLMQG Trigger: GCCCTGCATCAAGGAGCTTGTGTCAGATGCCAACCAACATGTCAAGTCAGCACTGGCTTCAGTCATCATGGGCCTCTCTCCCATTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007708.14 ENSMUST00000147983.3 |
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| CDS CAA 72 bp | TCCCCTGCCATACGAAGAACTGTGGGCAGCATGTGCTaGGTGGTGATATCCTGTCCACAGACCTCAGACAAC | + |
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Preference number: 6 (lower is better) Translates to: SPAIRRTVGSMC*VVISCPQTSDN Trigger: GTTGTCTGAGGTCTGTGGACAGGATATCACCACCAAGCACATGCTGCCCACAGTTCTTCGTATGGCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CAA 90 bp | GCAACTGGGTCCCCTGCCATACGAAGAACTGTGGGCAGCATGTGCTaGGTGGTGATATCCTGTCCACAGACCTCAGACAACACATTGATG | + |
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Preference number: 6 (lower is better) Translates to: ATGSPAIRRTVGSMC*VVISCPQTSDNTLM Trigger: CATCAATGTGTTGTCTGAGGTCTGTGGACAGGATATCACCACCAAGCACATGCTGCCCACAGTTCTTCGTATGGCAGGGGACCCAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS TCA 72 bp | GCATCTGACACAAGCTCCTTGATGCAGGGCAAGATCTaGGTCATGATCACATTCTCCCGGCAGTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ASDTSSLMQGKI*VMITFSRQSAE Trigger: CTCAGCTGACTGCCGGGAGAATGTGATCATGACTCAGATCTTGCCCTGCATCAAGGAGCTTGTGTCAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007708.14 ENSMUST00000147983.3 |
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| CDS CCA 72 bp | CCCATGATGACTGAAGCCAGTGCTGACTTGACATGTTaGTTGGCATCTGACACAAGCTCCTTGATGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PMMTEASADLTC*LASDTSSLMQG Trigger: GCCCTGCATCAAGGAGCTTGTGTCAGATGCCAACCAACATGTCAAGTCAGCACTGGCTTCAGTCATCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007708.14 ENSMUST00000147983.3 |
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| CDS CAA 72 bp | AGAATGGGTCCTATCTTCTGGAGTGACTTGGCCACATaGAAGCGGACATTGGCAACTGGGTCCCCTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: RMGPIFWSDLAT*KRTLATGSPAI Trigger: TATGGCAGGGGACCCAGTTGCCAATGTCCGCTTCAATGTGGCCAAGTCACTCCAGAAGATAGGACCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS GCA 72 bp | TGGGTCAGCTTCTCCAGGATGGGCTTGACTTCACTCTaGAGGGTGCTGTTATCAAGAATGGGTCCTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: WVSFSRMGLTSL*RVLLSRMGPIF Trigger: GAAGATAGGACCCATTCTTGATAACAGCACCCTGCAGAGTGAAGTCAAGCCCATCCTGGAGAAGCTGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CCA 72 bp | CCAGACATGGCTAAGACCTTGGGGATGATAGTGGCATaGGCCCACTCCTTCCCGAACTTCTCTACTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: PDMAKTLGMIVA*AHSFPNFSTNF Trigger: GAAATTAGTAGAGAAGTTCGGGAAGGAGTGGGCCCATGCCACTATCATCCCCAAGGTCTTAGCCATGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS CAA 90 bp | CTGTTATCAAGAATGGGTCCTATCTTCTGGAGTGACTTGGCCACATaGAAGCGGACATTGGCAACTGGGTCCCCTGCCATACGAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: LLSRMGPIFWSDLAT*KRTLATGSPAIRRT Trigger: AGTTCTTCGTATGGCAGGGGACCCAGTTGCCAATGTCCGCTTCAATGTGGCCAAGTCACTCCAGAAGATAGGACCCATTCTTGATAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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| CDS TCA 72 bp | TGCCAATCACCTCGTTCACACAATCCAGGTTGGAGATaGTATTCAGTCGGACTTCAGGACACTCATCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CQSPRSHNPGWR*YSVGLQDTHPS Trigger: TGAAGGATGAGTGTCCTGAAGTCCGACTGAATATCATCTCCAACCTGGATTGTGTGAACGAGGTGATTGGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007708.14 |
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