Pregenerated sensors for PPP2CA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020349Ensembl transcript IDs: ENSMUST00000020608.3
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTCCTCCTTCCTCCCAAGCCATTACTTGGTAATTAACTCCTCCTaGTGCCAAAACAGCCCTCACCTCTGTTCCTTTCTCACTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: CSSFLPSHYLVINSS*CQNSPHLCSFLTLA Trigger: TGCCAGAGTGAGAAAGGAACAGAGGTGAGGGCTGTTTTGGCAGCAGGAGGAGTTAATTACCAAGTAATGGCTTGGGAGGAAGGAGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR GCA 90 bp | TATATAGCAAGATCCCAGCCACTCAGGGCAACAGAAAGACTCTGTTaGCCTGCCCTTACCACAACCCACCCTAACAAAACAAAACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: YIARSQPLRATERLC*PALTTTHPNKTKQC Trigger: GCACTGTTTTGTTTTGTTAGGGTGGGTTGTGGTAAGGGCAGGGCAACAGAGTCTTTCTGTTGCCCTGAGTGGCTGGGATCTTGCTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CCA 90 bp | CTCAAAAAGATAAAAGACTGCTTCACCATGTATCCTGGATTGGCCTaGAACTCAGAGATCCATTTACCTGCCTCTGCCTCCCAAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LKKIKDCFTMYPGLA*NSEIHLPASASQVL Trigger: CAGCACTTGGGAGGCAGAGGCAGGTAAATGGATCTCTGAGTTCCAGGCCAATCCAGGATACATGGTGAAGCAGTCTTTTATCTTTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR TCA 90 bp | GCCCACTGCCCCACAGTACACAATATATCAAGGTACACTCATCATTaGAGCAGCAAAGAGGGATCTAGGTACAAGATCCCTCAACGTAAC | + |
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Preference number: 1 (lower is better) Translates to: AHCPTVHNISRYTHH*SSKEGSRYKIPQRN Trigger: GTTACGTTGAGGGATCTTGTACCTAGATCCCTCTTTGCTGCTTCAATGATGAGTGTACCTTGATATATTGTGTACTGTGGGGCAGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR GCA 90 bp | TTCTGCTCCCACCATTCCTGTTGTCTCTGGTGGTCTCATGGTGGATaGTTTTCACTTCCTCTGCTTGTTTTTGAGGTTATCTTGGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: FCSHHSCCLWWSHGG*FSLPLLVFEVILVV Trigger: AACCACCAAGATAACCTCAAAAACAAGCAGAGGAAGTGAAAAGCATCCACCATGAGACCACCAGAGACAACAGGAATGGTGGGAGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CCA 90 bp | AGGATTATGCTGGGCACGGTAATATATACCTTTAATTCCAGCAACTaGGAGGCAGAAGGAAGTTCAAGGCCAGCCTGGTCTATATTGTTT | + |
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Preference number: 1 (lower is better) Translates to: RIMLGTVIYTFNSSN*EAEGSSRPAWSILF Trigger: AAACAATATAGACCAGGCTGGCCTTGAACTTCCTTCTGCCTCCCAGTTGCTGGAATTAAAGGTATATATTACCGTGCCCAGCATAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR GCA 90 bp | GAATACTCACTCTTAGGCACCGAGATCCACTATCTGCCTCCACAATaGTGGGTGACACATGTGTCATTATATACAACTTTTAGAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: EYSLLGTEIHYLPPQ*WVTHVSLYTTFRDG Trigger: TCCATCTCTAAAAGTTGTATATAATGACACATGTGTCACCCAGCATTGTGGAGGCAGATAGTGGATCTCGGTGCCTAAGAGTGAGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR TCA 90 bp | TGGAACCCAGGGCACAGTACATGTGCTAGGCAAGTGCTCTACCAATaGACTACATTTGTAGCCATTAACACGTCTTTTAAAAAGACTGAT | + |
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Preference number: 1 (lower is better) Translates to: WNPGHSTCARQVLYQ*TTFVAINTSFKKTD Trigger: ATCAGTCTTTTTAAAAGACGTGTTAATGGCTACAAATGTAGTTCATTGGTAGAGCACTTGCCTAGCACATGTACTGTGCCCTGGGTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CCA 90 bp | CTTGTTTGGCCAGGAAGAAAAGACGAAGTAGCACAAATAACAGGCTaGAGAATGTGTTTCTTCGAACTCAGAATAAAAAGAAGACACCTA | + |
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Preference number: 1 (lower is better) Translates to: LVWPGRKDEVAQITG*RMCFFELRIKRRHL Trigger: TAGGTGTCTTCTTTTTATTCTGAGTTCGAAGAAACACATTCTCCAGCCTGTTATTTGTGCTACTTCGTCTTTTCTTCCTGGCCAAACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | GATCCCCAGTGCAGCTGCTTGGTGTCTACCTCCCTCAAGTGTTGGATCAGAAGTAAGACTCTGTTGCCCTaGCCTTACCACAACCCACCC | + |
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Preference number: 2 (lower is better) Translates to: DPQCSCLVSTSLKCWIRSKTLLP*PYHNPP Trigger: GGGTGGGTTGTGGTAAGGGCAGGGCAACAGAGTCTT...ACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCCACCACATGTGTGTCTaGTGCCGTGGAGACCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPHHMCV*CRGDQK Trigger: CTTCTGGTCTCCACGGCATCAGACACACATGTGGTG...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTACTGGGATTAAAGGTGTaGGCCACCAGTACCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SIRALFIVRIPSAAAWCLLGLKV*ATSTWP Trigger: AGGCCAGGTACTGGTGGCGCACACCTTTAATCCCAG...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCAGAACAACGCGGGGCTaGGATTTGAGAAGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPRTTRG*DLRRGE Trigger: TTCTCCCCTTCTCAAATCTCAGCCCCGCGTTGTTCT...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTTGCCTGCAGGCATGTACACCACATGTGTGTCTGATGCCGTGGAGACCAGAGAAGGGGAGAAACTaGGTGCAGACAAATCATACA | + |
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Preference number: 2 (lower is better) Translates to: VVCLQACTPHVCLMPWRPEKGRN*VQTNHT Trigger: TGTATGATTTGTCTGCACTCAGTTTCTCCCCTTCTC...TGGTCTCCACGGCATCAGACACACATGTGGTGTACATGCCTGCAGGCAAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CAA 90 bp | GCAGTGAGACATGGCAGCTGGCAGTTGAATCACAGGGTCAGGCCTTaGATGCTTATATCTTCTTTGCTTCCTATCTCTCTCTGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AVRHGSWQLNHRVRP*MLISSLLPISLCSS Trigger: GGAGGAGCAGAGAGAGATAGGAAGCAAAGAAGATATAAGCATCAAAGGCCTGACCCTGTGATTCAACTGCCAGCTGCCATGTCTCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTTTTGAGTGGTTTGCCTaGAGGCATGTACACCACATG | + |
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Preference number: 2 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTFEWFA*RHVHHM Trigger: CATGTGGTGTACATGCCTGCAGGCAAACCACTCAAA...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCATACATCACCATTTGTaGATGGAGGCCAGAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPIHHHL*MEARGQ Trigger: TTGTCCTCTGGCCTCCATGCACAAATGGTGATGTAT...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTTATGCCTTTACCAGCTaGGTCACCTTACCATATCCA | + |
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Preference number: 2 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTYAFTS*VTLPYP Trigger: TGGATATGGTAAGGTGACTCAGCTGGTAAAGGCATA...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCAAACAGCACCAGTCGTaGCCACTGATACAATTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPKQHQS*PLIQFK Trigger: TTTGAATTGTATCAGTGGGCACGACTGGTGCTGTTT...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTACGCTATGCCAGAAACTaGATTCTTGACCAACAATGT | + |
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Preference number: 2 (lower is better) Translates to: SIRALFIVRIPSAAAWCLRYARN*ILDQQC Trigger: ACATTGTTGGTCAAGAATCCAGTTTCTGGCATAGCG...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCTTTAATTCCAGCAACTaGGAGGCAGAAGGAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPFNSSN*EAEGSS Trigger: TGAACTTCCTTCTGCCTCCCAGTTGCTGGAATTAAA...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACGATCCCCAGTGCAGCTaGTTGGTGTCTACCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHDPQCS*LVSTSL Trigger: GAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATC...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GATCCCCAGTGCAGCTGCTTGGTGTCTACCTCCCTCAAGTGTTGGATCAGAAGTAACTCTCAAGTTCTATaGTTTAACAACCAAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DPQCSCLVSTSLKCWIRSNSQVL*FNNQVP Trigger: TGGGACTTGGTTGTTAAACCATAGAACTTGAGAGTT...ACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACCGCGGGGCTGAGATTTaGGAAGGGGAGAAACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHRGAEI*EGEKLS Trigger: ACTCAGTTTCTCCCCTTCTCAAATCTCAGCCCCGCG...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTAGATACAATTCAAACCTaGCTTTCTCAGTTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SIRALFIVRIPSAAAWCLDTIQT*LSQFSS Trigger: ACTTGAGAACTGAGAAAGTCAGGTTTGAATTGTATC...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCGTTACACAGTGGCCTTaGTCTTTATTTTTCTTTACC | + |
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Preference number: 2 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPVTQWP*SLFFFT Trigger: GGTAAAGAAAAATAAAGATCAAGGCCACTGTGTAAC...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACCTCCACAATGCTGGGTaGCACATGTGTCATTATATA | + |
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Preference number: 2 (lower is better) Translates to: DPFTCLCLPSADIIDVSHLHNAG*HMCHYI Trigger: TATATAATGACACATGTGTCACCCAGCATTGTGGAG...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTACAAGAGGGGAGGCCTTaGTACTTATTTAAAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: SIRALFIVRIPSAAAWCLQEGRP*YLFKNV Trigger: AACATTTTTAAATAAGTACCAAGGCCTCCCCTCTTG...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACCAAACCGTCTCCCAATaGTCACTGAACATTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: DPFTCLCLPSADIIDVSHQTVSQ*SLNISR Trigger: TCTTGAAATGTTCAGTGACCATTGGGAGACGGTTTG...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTATTCTCTCATTTGAGTaGTTCCCTTCCAACTATCAT | + |
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Preference number: 2 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTILSFE*FPSNYH Trigger: ATGATAGTTGGAAGGGAATCACTCAAATGAGAGAAT...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTAGGGGAGAAACTGAGTaGAGACAAATCATACAATTA | + |
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Preference number: 2 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTRGETE*RQIIQL Trigger: TAATTGTATGATTTGTCTGCACTCAGTTTCTCCCCT...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATTTACGCTGGGTGTGGTaGTGCACGCCTTCAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GNEKNGDASQYTTHTYENLRWVW*CTPSIP Trigger: TGGGATTGAAGGCGTGCACCACCACACCCAGCGTAA...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATAGATGTGAGTCACCATaGCCCACCCAGCAGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GNEKNGDASQYTTHTYENRCESP*PTQQCS Trigger: AGAACACTGCTGGGTGGGGCATGGTGACTCACATCT...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACGTGTGTCTGATGCCGTaGAGACCAGAAGAGAGTATC | + |
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Preference number: 2 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHVCLMP*RPEESI Trigger: GATACTCTCTTCTGGTCTCCACGGCATCAGACACAC...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATGACCAGAGGTGGATGTaGGTCCTCTTGAAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GNEKNGDASQYTTHTYENDQRWM*VLLKSS Trigger: ACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTC...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACCCATGTATCCTGGATTaGCCTGGAACTCAGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYPCILD*PGTQRS Trigger: GGATCTCTGAGTTCCAGGCCAATCCAGGATACATGG...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACCTTCACCATGTATCCTaGATTGGCCTGGAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYLHHVS*IGLELR Trigger: TCTGAGTTCCAGGCCAATCCAGGATACATGGTGAAG...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATAGAACACCAAGGAGTTaGCAGAGAGGTTACACAGTG | + |
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Preference number: 2 (lower is better) Translates to: GNEKNGDASQYTTHTYENRTPRS*QRGYTV Trigger: CACTGTGTAACCTCTCTGGCAACTCCTTGGTGTTCT...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACTGGTTCATTCTAAAGTaGTCACGGCTGTTGATGACA | + |
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Preference number: 2 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYWFILK*SRLLMT Trigger: TGTCATCAACAGCCGTGACCACTTTAGAATGAACCA...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACATACATAGCCCGACTTaGCACAATGTACAAATCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHIHSPT*HNVQIS Trigger: TGAGATTTGTACATTGTGTCAAGTCGGGCTATGTAT...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACATTATGATAAATGCTTaGGGCATACATAGCCCGACT | + |
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Preference number: 2 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYIMINA*GIHSPT Trigger: AGTCGGGCTATGTATGCCTCAAGCATTTATCATAAT...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACGAAAGGGAGACACTGTaGATTTGTAATGAAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYERETL*ICNEER Trigger: CCTTTCTTCATTACAAATGCACAGTGTCTCCCTTTC...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACGAATCTGTATGTACATaGCATGTGTCAACTATAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHESVCT*HVSTIG Trigger: TCCTATAGTTGACACATGTCATGTACATACAGATTC...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATGCACAAATAACAGGCTaGAGAATGTGTTTCTTCGAA | + |
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Preference number: 2 (lower is better) Translates to: GNEKNGDASQYTTHTYENAQITG*RMCFFE Trigger: TTCGAAGAAACACATTCTCCAGCCTGTTATTTGTGC...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CCA 72 bp | GATGCCGTGGAGACCAGAAGAGAGTATCAGGGCCTCTaGAGTCGAAGTTATAGGCAGCTGGGGGCTACAAGA | + |
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Preference number: 3 (lower is better) Translates to: DAVETRREYQGL*SRSYRQLGATR Trigger: TCTTGTAGCCCCCAGCTGCCTATAACTTCGACTCCAGAGGCCCTGATACTCTCTTCTGGTCTCCACGGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CCA 72 bp | CTGCAGGCATGTACACCACATGTGTGTCTGATGCCGTaGAGACCAGAAGAGAGTATCAGGGCCTCTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LQACTPHVCLMP*RPEESIRASGV Trigger: GACTCCAGAGGCCCTGATACTCTCTTCTGGTCTCCACGGCATCAGACACACATGTGGTGTACATGCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR TCA 72 bp | TGGTTTGCCTGCAGGCATGTACACCACATGTGTGTCTaGTGCCGTGGAGACCAGAAGAGAGTATCAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WFACRHVHHMCV*CRGDQKRVSGP Trigger: AGGCCCTGATACTCTCTTCTGGTCTCCACGGCATCAGACACACATGTGGTGTACATGCCTGCAGGCAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | CTCGGACCTGGCGCAAACATCAGCCCACATCAGCATTaGTTCTACTCGGCTTCACTGCTTTACCAGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGPGANISPHQH*FYSASLLYQVR Trigger: CCTTACCTGGTAAAGCAGTGAAGCCGAGTAGAAGCAATGCTGATGTGGGCTGATGTTTGCGCCAGGTCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | CCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTaGACGCCTTCAATCCCAGCACTCGGGAGGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PINYWLLRWVWW*TPSIPALGRQR Trigger: TCTCTGCCTCCCGAGTGCTGGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | GCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTaGTGTCTACCTCCCTCAAGTGTTGGATCAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALFIVRIPSAAA*CLPPSSVGSEV Trigger: CACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | AAGCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTaGTGCACGCCTTCAATCCCAGCACTCGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPINYWLLRWVW*CTPSIPALGRQ Trigger: CTGCCTCCCGAGTGCTGGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | CAGAGATCCATTTACCTGCCTCTGCCTCCCAAGTGCTaGTATCATAGATGTGAGTCACCATGCCCCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QRSIYLPLPPKC*YHRCESPCPTQ Trigger: CTGGGTGGGGCATGGTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | ACTCTGGCAGACCATAACCCTGAAACTGGGCCAAAATaGACCTCTCCTCCCCTAAGATGCTCCTGTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLADHNPETGPK*TSPPLRCSCQA Trigger: TGCCTGACAGGAGCATCTTAGGGGAGGAGAGGTTCATTTTGGCCCAGTTTCAGGGTTATGGTCTGCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | AGATCCCAGCCACTCAGGGCAACAGAAAGACTCTGTTaGCCTGCCCTTACCACAACCCACCCTAACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RSQPLRATERLC*PALTTTHPNKT Trigger: TGTTTTGTTAGGGTGGGTTGTGGTAAGGGCAGGGCAACAGAGTCTTTCTGTTGCCCTGAGTGGCTGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTTGCCTGCAGGCATGTACACCACATGTGTGTCTGATGCCGTGGAGACCAAAGTGGTCACGGCTGTaGATGACAAGAGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VVCLQACTPHVCLMPWRPKWSRL*MTRGFV Trigger: TACAAAGCCTCTTGTCATCAACAGCCGTGACCACTT...TGGTCTCCACGGCATCAGACACACATGTGGTGTACATGCCTGCAGGCAAACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTACAGCCCACATCAGCATaGCTTCTACTCGGCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SIRALFIVRIPSAAAWCLQPTSA*LLLGFT Trigger: AGTGAAGCCGAGTAGAAGCAATGCTGATGTGGGCTG...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | ATGTCCAAGGAGACCAGAGGTGGATGTGGGTCCTCTTaGAGAGCAGTGTGTGTTCTTAACTCTGGCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: MSKETRGGCGSS*RAVCVLNSGST Trigger: AGTGGAGCCAGAGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCTTGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | TCAAAGGGGACCACCAGGCTACCTTTCACGGCCCACTaGCCCACAGTACACAATATATCAAGGTACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SKGTTRLPFTAH*PTVHNISRYTH Trigger: ATGAGTGTACCTTGATATATTGTGTACTGTGGGGCAGTGGGCCGTGAAAGGTAGCCTGGTGGTCCCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | ATTAAGCCTATAAATTATTGGCTGTTACGCTGGGTGTaGTGGTGCACGCCTTCAATCCCAGCACTCGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IKPINYWLLRWV*WCTPSIPALGR Trigger: CCTCCCGAGTGCTGGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGCTTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTTGCATACATCACCATTaGTGCATGGAGGCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTCIHHH*CMEARG Trigger: TCCTCTGGCCTCCATGCACAAATGGTGATGTATGCA...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | GGAGTCGAAGTTATAGGCAGCTGGGGGCTACAAGATTaGCTGCTAAGCACCTGTCCAGACTTCTTGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: GVEVIGSWGLQD*LLSTCPDFLTT Trigger: TGTTGTCAAGAAGTCTGGACAGGTGCTTAGCAGTCAATCTTGTAGCCCCCAGCTGCCTATAACTTCGACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | TTCCTTTCACAAGCGCAGGCCAGCAACAAGACAAACTaGGGTATGTCAGACAAACAGGTCCCCAAGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSQAQASNKTN*GMSDKQVPKFF Trigger: GAAGAACTTGGGGACCTGTTTGTCTGACATACCGCAGTTTGTCTTGTTGCTGGCCTGCGCTTGTGAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | TCCTGGATTGGCCTGGAACTCAGAGATCCATTTACCTaGCTCTGCCTCCCAAGTGCTGATATCATAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SWIGLELRDPFT*LCLPSADIIDV Trigger: CACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATCTCTGAGTTCCAGGCCAATCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | ATTGGCCTGGAACTCAGAGATCCATTTACCTGCCTCTaGCTCCCAAGTGCTGATATCATAGATGTGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IGLELRDPFTCL*LPSADIIDVSH Trigger: GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATCTCTGAGTTCCAGGCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | ATAAAAGACTGCTTCACCATGTATCCTGGATTGGCCTaGAACTCAGAGATCCATTTACCTGCCTCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IKDCFTMYPGLA*NSEIHLPASAS Trigger: GGAGGCAGAGGCAGGTAAATGGATCTCTGAGTTCCAGGCCAATCCAGGATACATGGTGAAGCAGTCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTATAGATGTTACTTGTTaGGCCAGGAAGAAAAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTIDVTC*ARKKRR Trigger: TCGTCTTTTCTTCCTGGCCAAACAAGTAACATCTAT...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCATGTGGGCATCAAGATaGAATACCACAGAATTAACT | + |
|
Preference number: 3 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPMWASR*NTTELT Trigger: AGTTAATTCTGTGGTATTCAATCTTGATGCCCACAT...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCAACAGAAAGACTCTGTaGCCCTGCCCTTACCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCNRKTL*PCPYHN Trigger: GTTGTGGTAAGGGCAGGGCAACAGAGTCTTTCTGTT...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACCAGAGGTGGATGTGGGTCCTCTTGAAGAGCAGTGTGTGTTCTTAACTACTGATCTTTATTTTTaGTTTGAGTGGTTTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RRPEVDVGPLEEQCVFLTTDLYF*FEWFAC Trigger: GCAGGCAAACCACTCAAACAAAAAATAAAGATCAGT...AGTTAAGAACACACACTGCTCTTCAAGAGGACCCACATCCACCTCTGGTCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | GCACCGAGATCCACTATCTGCCTCCACAATGCTGGGTaGCACATGTGTCATTATATACAACTTTTAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: APRSTICLHNAG*HMCHYIQLLEM Trigger: CATCTCTAAAAGTTGTATATAATGACACATGTGTCACCCAGCATTGTGGAGGCAGATAGTGGATCTCGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR GCA 72 bp | CTCTTAGGCACCGAGATCCACTATCTGCCTCCACAATaGTGGGTGACACATGTGTCATTATATACAACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLGTEIHYLPPQ*WVTHVSLYTTF Trigger: AAAAGTTGTATATAATGACACATGTGTCACCCAGCATTGTGGAGGCAGATAGTGGATCTCGGTGCCTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCAAGAACACCAAGGAGTaGCCAGAGAGGTTACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCKNTKE*PERLHS Trigger: ACTGTGTAACCTCTCTGGCAACTCCTTGGTGTTCTT...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | CTCTCCTCCCCTAAGATGCTCCTGTCAGGCATCTATTaGCAGTTACATAAAACATATACACTACTACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSSPKMLLSGIY*QLHKTYTLLHH Trigger: GTGGTGTAGTAGTGTATATGTTTTATGTAACTGTCAATAGATGCCTGACAGGAGCATCTTAGGGGAGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | TCTCAAAAAGATAAAAGACTGCTTCACCATGTATCCTaGATTGGCCTGGAACTCAGAGATCCATTTACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SQKDKRLLHHVS*IGLELRDPFTC Trigger: GCAGGTAAATGGATCTCTGAGTTCCAGGCCAATCCAGGATACATGGTGAAGCAGTCTTTTATCTTTTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | TTTCACTTCCTCTGCTTGTTTTTGAGGTTATCTTGGTaGTTTCCATCTTCCTGTGACACCTTTTGGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FHFLCLFLRLSW*FPSSCDTFWYA Trigger: AGCATACCAAAAGGTGTCACAGGAAGATGGAAACCACCAAGATAACCTCAAAAACAAGCAGAGGAAGTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCAGCTCCAATGATTGTTaGCTATCCTCATCTACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCSSNDC*LSSSTV Trigger: GACTGTAGATGAGGATAGCAAACAATCATTGGAGCT...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCACTGTAACTTCACTGTaGGTTCCAAATTCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCTVTSL*VPNSTQ Trigger: CTGTGTTGAATTTGGAACCAACAGTGAAGTTACAGT...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACACCTGTCCAGACTTCTaGACAACACCCATTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYTCPDF*TTPIFD Trigger: ATCAAAAATGGGTGTTGTCAAGAAGTCTGGACAGGT...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | TTTACAGTTCTACCATATAGAGACTGGCAAGGGGCATaGTCAAACACATTTACAACCTTGCAGAGGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FTVLPYRDWQGA*SNTFTTLQRLF Trigger: AAATAACCTCTGCAAGGTTGTAAATGTGTTTGACCATGCCCCTTGCCAGTCTCTATATGGTAGAACTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CCA 72 bp | CCAGGAAGAAAAGACGAAGTAGCACAAATAACAGGCTaGAGAATGTGTTTCTTCGAACTCAGAATAAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGRKDEVAQITG*RMCFFELRIKR Trigger: TCTTTTTATTCTGAGTTCGAAGAAACACATTCTCCAGCCTGTTATTTGTGCTACTTCGTCTTTTCTTCCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR TCA 72 bp | CTTGGTACTTATTTAAAAATGTTCATTAAGCTCCAATaGTTGTTTGCTATCCTCATCTACAGTCATGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGTYLKMFIKLQ*LFAILIYSHAE Trigger: CTCAGCATGACTGTAGATGAGGATAGCAAACAATCATTGGAGCTTAATGAACATTTTTAAATAAGTACCAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR TCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACCTGGGGTACGACGAGTaGCATGTGGCTCGCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DPFTCLCLPSADIIDVSHLGYDE*HVARLY Trigger: GTAGAGGCGAGCCACATGTCACTCGTCGTACCCCAG...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | TCTCGGACCTGGCGCAAACATCAGCCCACATCAGCATaGCTTCTACTCGGCTTCACTGCTTTACCAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTWRKHQPTSA*LLLGFTALPGK Trigger: CTTACCTGGTAAAGCAGTGAAGCCGAGTAGAAGCAATGCTGATGTGGGCTGATGTTTGCGCCAGGTCCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | AGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTaGGTGTCTACCTCCCTCAAGTGTTGGATCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLYRQDPQCSC*VSTSLKCWIRS Trigger: ACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR TCA 90 bp | TCCATTAGAGCCCTCTTTATCGTCAGGATCCCCAGTGCAGCTGCTTGGTGTCTAATCTGTCTGCTCTCGTaGTTCCCTCGGAGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRALFIVRIPSAAAWCLICLLS*FPRSMV Trigger: CACCATACTCCGAGGGAATCACGAGAGCAGACAGAT...TAGACACCAAGCAGCTGCACTGGGGATCCTGACGATAAAGAGGGCTCTAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR CCA 90 bp | GATCCCCAGTGCAGCTGCTTGGTGTCTACCTCCCTCAAGTGTTGGATCAGAAGTACTACGTTCCGGTCATaGCACCAGTTATATCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPQCSCLVSTSLKCWIRSTTFRS*HQLYPS Trigger: GGAGGGATATAACTGGTGCCATGACCGGAACGTAGT...ACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGGGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR CCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACACGACGAGTGACATGTaGCTCGCCTCTACGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPFTCLCLPSADIIDVSHTTSDM*LASTRC Trigger: GCACCTCGTAGAGGCGAGCCACATGTCACTCGTCGT...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR GCA 90 bp | GCCTATAAATTATTGGCTGTTACGCTGGGTGTGGTGGTGCACGCCTTCAATCCCTGTAGACAGAAGATCTaGCCATCCACCAAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYKLLAVTLGVVVHAFNPCRQKI*PSTKAV Trigger: CACTGCCTTGGTGGATGGGCAGATCTTCTGTCTACA...GGGATTGAAGGCGTGCACCACCACACCCAGCGTAACAGCCAATAATTTATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | TCAAAGAATAGAAGGGAAACCCATTACTCGCTGAGCTaGGCACTCAGGCACCATTCTCGGACCTGGCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKNRRETHYSLS*ALRHHSRTWRK Trigger: TTTGCGCCAGGTCCGAGAATGGTGCCTGAGTGCCAAGCTCAGCGAGTAATGGGTTTCCCTTCTATTCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | CCAGTGCAGCTGCTTGGTGTCTACCTCCCTCAAGTGTaGGATCAGAAGTGCTGTACATTAAGTCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQLLGVYLPQV*DQKCCTLSQAW Trigger: CCATGCCTGACTTAATGTACAGCACTTCTGATCCAACACTTGAGGGAGGTAGACACCAAGCAGCTGCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAACAGAAAGACTCTGTTGCCCTGCCCTTACCACAACCCACCCTAACAAAAACCCATAAACCTGTGTaGTCTGTCTGCTCTCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQQKDSVALPLPQPTLTKTHKPV*SVCSRD Trigger: ATCACGAGAGCAGACAGATCACACAGGTTTATGGGT...TTTTGTTAGGGTGGGTTGTGGTAAGGGCAGGGCAACAGAGTCTTTCTGTTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | TGGAGTCGAAGTTATAGGCAGCTGGGGGCTACAAGATaGACTGCTAAGCACCTGTCCAGACTTCTTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSRSYRQLGATR*TAKHLSRLLDN Trigger: GTTGTCAAGAAGTCTGGACAGGTGCTTAGCAGTCAATCTTGTAGCCCCCAGCTGCCTATAACTTCGACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAAACTGGATTCTTGACCAACAATGTCGCGTCAGCATGCAATGAACTGGTTCTCGCCTCTACGAGGTaGTGGGTCAAACTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PETGFLTNNVASACNELVLASTR*WVKLQE Trigger: TTCTTGCAGTTTGACCCAGCACCTCGTAGAGGCGAG...AACCAGTTCATTGCATGCTGACGCGACATTGTTGGTCAAGAATCCAGTTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR CCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACGCCTCTACGAGGTGCTaGGTCAAACTGCAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPFTCLCLPSADIIDVSHASTRC*VKLQER Trigger: TCTTTCTTGCAGTTTGACCCAGCACCTCGTAGAGGC...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| 3UTR CAA 72 bp | TACATCACCATTTGTGCATGGAGGCCAGAGGACAACTaGCAGGAGTTGGTTTTCTCCTTCCACCACGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YITICAWRPEDN*QELVFSFHHVD Trigger: ATCTACGTGGTGGAAGGAGAAAACCAACTCCTGCAAGTTGTCCTCTGGCCTCCATGCACAAATGGTGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
||
| CDS-3UTR TCA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACCATCCACCAAGGCAGTaGGAGGAAGATAGTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: DPFTCLCLPSADIIDVSHHPPRQ*EEDSQK Trigger: TTTTTGACTATCTTCCTCTCACTGCCTTGGTGGATG...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR GCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACTGGGACTCGGAGAGCTaGTTGCACTCGTTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYWDSES*LHSFSC Trigger: GCAGCTGAACGAGTGCAAGCAGCTCTCCGAGTCCCA...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CAA 72 bp | CATGGCAGCTGGCAGTTGAATCACAGGGTCAGGCCTTaGATGCTTATATCTTCTTTGCTTCCTATCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HGSWQLNHRVRP*MLISSLLPISL Trigger: GAGAGAGATAGGAAGCAAAGAAGATATAAGCATCAAAGGCCTGACCCTGTGATTCAACTGCCAGCTGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR TCA 90 bp | TCCAGCTGTAGTTACAATGGTTATTTACTTTTAAGACAGGATTATGCTGGGCACCACATTGGACCCTCATaGGGAACTTCCTGTAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SSCSYNGYLLLRQDYAGHHIGPS*GTSCRR Trigger: TCGCCTACAGGAAGTTCCTCATGAGGGTCCAATGTG...GTGCCCAGCATAATCCTGTCTTAAAAGTAAATAACCATTGTAACTACAGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| 3UTR CAA 72 bp | CTCATGGTGGATGCTTTTCACTTCCTCTGCTTGTTTTaGAGGTTATCTTGGTGGTTTCCATCTTCCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LMVDAFHFLCLF*RLSWWFPSSCD Trigger: GTCACAGGAAGATGGAAACCACCAAGATAACCTCAAAAACAAGCAGAGGAAGTGAAAAGCATCCACCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR TCA 90 bp | CAGAAGATACCACCAGTACCACAAAATCCAGCTGTAGTTACAATGGTTATTTACTCGAGTGCTCGGATGTaGTCCAGTGTGTCTATGGAT | + |
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Preference number: 4 (lower is better) Translates to: QKIPPVPQNPAVVTMVIYSSARM*SSVSMD Trigger: ATCCATAGACACACTGGATCACATCCGAGCACTCGA...GTAAATAACCATTGTAACTACAGCTGGATTTTGTGGTACTGGTGGTATCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR TCA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCTGTCGTCAAGTTCCATaGTTGCAGCTTGGTTACCAC | + |
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Preference number: 4 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCCRQVP*LQLGYH Trigger: GTGGTAACCAAGCTGCAATCATGGAACTTGACGACA...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR CCA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCTCCACACACAGTGACTaGACATCGAACCTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCSTHSD*TSNLLN Trigger: GTTCAAGAGGTTCGATGTCCAGTCACTGTGTGTGGA...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR TCA 90 bp | GGAAATGAGAAAAATGGTGATGCATCACAGTATACCACACACACGTATGAAAATCATCTCCACACACAGTaGCTGGACATCGAACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GNEKNGDASQYTTHTYENHLHTQ*LDIEPL Trigger: AAGAGGTTCGATGTCCAGTCACTGTGTGTGGAGATG...ATTTTCATACGTGTGTGTGGTATACTGTGATGCATCACCATTTTTCTCATTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR TCA 90 bp | ATGTGTCATTATATACAACTTTTAGAGATGGAACCCAGGGCACAGTACATGTGCAATAGTTTGGAGCACTaGAAATTGTTACTACGTTCC | + |
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Preference number: 4 (lower is better) Translates to: MCHYIQLLEMEPRAQYMCNSLEH*KLLLRS Trigger: GGAACGTAGTAACAATTTTCAGTGCTCCAAACTATT...GCACATGTACTGTGCCCTGGGTTCCATCTCTAAAAGTTGTATATAATGACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR CAA 90 bp | GATCCATTTACCTGCCTCTGCCTCCCAAGTGCTGATATCATAGATGTGAGTCACACAGCAAGTCACACATaGGACCCTCATGAGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: DPFTCLCLPSADIIDVSHTASHT*DPHEEL Trigger: AAGTTCCTCATGAGGGTCCAATGTGTGACTTGCTGT...GTGACTCACATCTATGATATCAGCACTTGGGAGGCAGAGGCAGGTAAATGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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| CDS-3UTR CAA 90 bp | GGGCAACAGAAAGACTCTGTTGCCCTGCCCTTACCACAACCCACCCTAACAAAATGTCTCAGAAATATCTaGGCCAAAGGTATAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: GQQKDSVALPLPQPTLTKCLRNI*AKGITS Trigger: GCTGGTTATACCTTTGGCCAAGATATTTCTGAGACA...TTTTGTTAGGGTGGGTTGTGGTAAGGGCAGGGCAACAGAGTCTTTCTGTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020608.3 |
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