Pregenerated sensors for PPP1R8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028882Ensembl transcript IDs: ENSMUST00000030702.14, ENSMUST00000105919.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACTGGTACTTTAGCCCCACCCCTGGTCTCAGTATTACATGGTTaGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACATGGA | + |
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Preference number: 1 (lower is better) Translates to: LTGTLAPPLVSVLHG*DLRRLSERRYCTHG Trigger: TCCATGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTGAGACCAGGGGTGGGGCTAAAGTACCAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 90 bp | TTAACTAATGAGGCTCTACCCTCTCATTGCTCCAGATGCCTCCCATaGGCGACTTCACATAAAACAGTCCTAATAGGTGGCACAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: LTNEALPSHCSRCLP*ATSHKTVLIGGTGT Trigger: TGTCCCTGTGCCACCTATTAGGACTGTTTTATGTGAAGTCGCTCATGGGAGGCATCTGGAGCAATGAGAGGGTAGAGCCTCATTAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGCTACAGATGAGGGGAACTCAAAATGGCCTCATGCCACCAGACATGACCGGCTCAGAAGGGACTaGGAAGCCTCTCTCTACACT | + |
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Preference number: 2 (lower is better) Translates to: TLATDEGNSKWPHATRHDRLRRD*EASLYT Trigger: AGTGTAGAGAGAGGCTTCCCAGTCCCTTCTGAGCCG...GTCATGTCTGGTGGCATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCTACAGATGAGGGGAACTCAAAATGGCCTCATGCCACCAGACATGACAAACAGTCCTAATAGGTaGCACAGGGACATCGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HWLQMRGTQNGLMPPDMTNSPNR*HRDIAR Trigger: CCTGGCGATGTCCCTGTGCCACCTATTAGGACTGTT...TGTCATGTCTGGTGGCATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGAAGCCTCTCTCTATCTGAAAGACGATACTaGACACATGGAAAGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: TGTSPGQSAQKGLGSLSLSERRY*THGKFS Trigger: AGAAAACTTTCCATGTGTGCAGTATCGTCTTTCAGA...TAGAGAGAGGCTTCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCTTCCTGTTCACCAGGAACTGCCTCAGGGCACACACCAACAGTGAGGCCTCAGTATTACATGGTTaGGACCTCAGGAGACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IVFLFTRNCLRAHTNSEASVLHG*DLRRLS Trigger: AGAAAGTCTCCTGAGGTCCCAACCATGTAATACTGA...GGCCTCACTGTTGGTGTGTGCCCTGAGGCAGTTCCTGGTGAACAGGAAGACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGACTGGGAAGCCTCTCTCTACACTTCAAGCTGCCTGACTCAGTCCTTAGGTCTCAGTATTACATaGTTGGGACCTCAGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: RRDWEASLYTSSCLTQSLGLSIT*LGPQET Trigger: AGTCTCCTGAGGTCCCAACCATGTAATACTGAGACC...TAAGGACTGAGTCAGGCAGCTTGAAGTGTAGAGAGAGGCTTCCCAGTCCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR-3UTR TCA 90 bp | CTGTACAAAGCTCGTACAATGGTTCCTACCTTGTCTCCTGTTAGCCAGGTCTATCCTCAGGAGACTTTCTaGAAGACGATACTGCACACA | + |
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Preference number: 2 (lower is better) Translates to: LYKARTMVPTLSPVSQVYPQETF*KTILHT Trigger: TGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGG...ATAGACCTGGCTAACAGGAGACAAGGTAGGAACCATTGTACGAGCTTTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR CCA 72 bp | CAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTaGGAAGCCTCTCTCTACACTTCAAGCTGCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: QGHRQDSRLRRD*EASLYTSSCLT Trigger: AGTCAGGCAGCTTGAAGTGTAGAGAGAGGCTTCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 72 bp | GGGACTGGGAAGCCTCTCTCTACACTTCAAGCTGCCTaGCTCAGTCCTTACTGGTACTTTAGCCCCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: GTGKPLSTLQAA*LSPYWYFSPTP Trigger: AGGGGTGGGGCTAAAGTACCAGTAAGGACTGAGTCAGGCAGCTTGAAGTGTAGAGAGAGGCTTCCCAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 72 bp | GAGGCTCTACCCTCTCATTGCTCCAGATGCCTCCCATaGGCGACTTCACATAAAACAGTCCTAATAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: EALPSHCSRCLP*ATSHKTVLIGG Trigger: GCCACCTATTAGGACTGTTTTATGTGAAGTCGCTCATGGGAGGCATCTGGAGCAATGAGAGGGTAGAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 72 bp | AAACCCATTAGCCTGTCCTGTGACACTGGCTACAGATaGGGGGAACTCAAAATGGCCTCATGCCACCAGACA | + |
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Preference number: 3 (lower is better) Translates to: KPISLSCDTGYR*GELKMASCHQT Trigger: TGTCTGGTGGCATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTGTCACAGGACAGGCTAATGGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR CCA 72 bp | ACTTTAGCCCCACCCCTGGTCTCAGTATTACATGGTTaGGACCTCAGGAGACTTTCTGAAAGACGATACTGC | + |
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Preference number: 3 (lower is better) Translates to: TLAPPLVSVLHG*DLRRLSERRYC Trigger: GCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTGAGACCAGGGGTGGGGCTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 72 bp | CAGGCACAAGAGGACACTCGTTTACTGTGGTTTAAATaGACAGTGTCAACCAACCTGGTATCCATGCAACCG | + |
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Preference number: 3 (lower is better) Translates to: QAQEDTRLLWFK*TVSTNLVSMQP Trigger: CGGTTGCATGGATACCAGGTTGGTTGACACTGTTCATTTAAACCACAGTAAACGAGTGTCCTCTTGTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR TCA 72 bp | CTCAGTATTACATGGTTGGGACCTCAGGAGACTTTCTaGAAGACGATACTGCACACATGGAAAGTTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSITWLGPQETF*KTILHTWKVFS Trigger: GGAGAAAACTTTCCATGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR CCA 72 bp | GAGGAGGCTGCACTCGAACTAAATGAGTTTTCAGTGTaGACAAGAAACATAGGTAAAGTCCAACAATACTGT | + |
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Preference number: 3 (lower is better) Translates to: EEAALELNEFSV*TRNIGKVQQYC Trigger: ACAGTATTGTTGGACTTTACCTATGTTTCTTGTCCACACTGAAAACTCATTTAGTTCGAGTGCAGCCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| 3UTR CCA 72 bp | TACACAAATGTACAAATCTGTACAAAGCTCGTACAATaGTTCCTACCTTGTCTCCTGTTAGCCAGGTCTATT | + |
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Preference number: 3 (lower is better) Translates to: YTNVQICTKLVQ*FLPCLLLARSI Trigger: AATAGACCTGGCTAACAGGAGACAAGGTAGGAACCATTGTACGAGCTTTGTACAGATTTGTACATTTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR GCA 90 bp | ACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGAAGCCTCTCTCTAGCGCTGTCCCATGAATaGCATGCGGCTGGGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TGTSPGQSAQKGLGSLSLALSHE*HAAGSP Trigger: CGGGCTCCCAGCCGCATGGCATTCATGGGACAGCGC...TAGAGAGAGGCTTCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTCCTGTTCACCAGGAACTGCCTCAGGGCACACACCAACAGTGAGGCCCGAACAGCGGGAGGCTaGAGCCGGAGTTCACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVFLFTRNCLRAHTNSEARTAGG*SRSSRL Trigger: CAGCCGTGAACTCCGGCTCCAGCCTCCCGCTGTTCG...GGCCTCACTGTTGGTGTGTGCCCTGAGGCAGTTCCTGGTGAACAGGAAGACTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | CTAATAGGTGGCACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGAGTCCCAACAAGCCCTTaGGTTCATCATCCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LIGGTGTSPGQSAQKGLGVPTSP*VHHPLR Trigger: GCGGAGAGGATGATGAACTCAAGGGCTTGTTGGGAC...TCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGTGCCACCTATTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | CTAATAGGTGGCACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGACGGATCCACGTCCTCTaGGTTGATGATCTCGTCATC | + |
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Preference number: 4 (lower is better) Translates to: LIGGTGTSPGQSAQKGLGRIHVL*VDDLVI Trigger: GATGACGAGATCATCAACCCAGAGGACGTGGATCCG...TCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGTGCCACCTATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTCCTGTTCACCAGGAACTGCCTCAGGGCACACACCAACAGTGAGGCCGGTTCCAGCCGAATGTaGCCCAAGAAAGTGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: IVFLFTRNCLRAHTNSEAGSSRM*PKKVPC Trigger: ACATGGCACTTTCTTGGGTCACATTCGGCTGGAACC...GGCCTCACTGTTGGTGTGTGCCCTGAGGCAGTTCCTGGTGAACAGGAAGACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | ACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGAAGCCTCTCTCTAATTTATGGCCACTGCTaGTGGCACAACAGGAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TGTSPGQSAQKGLGSLSLIYGHC*WHNRSQ Trigger: TTGACTCCTGTTGTGCCATCAGCAGTGGCCATAAAT...TAGAGAGAGGCTTCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTCCTGTTCACCAGGAACTGCCTCAGGGCACACACCAACAGTGAGGCCCTCAATAGTGAGGGTTaGAATCCGCTTGTTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IVFLFTRNCLRAHTNSEALNSEG*NPLVVG Trigger: GCCCACAACAAGCGGATTTCAACCCTCACTATTGAG...GGCCTCACTGTTGGTGTGTGCCCTGAGGCAGTTCCTGGTGAACAGGAAGACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | GACATGACACAGAATGGCCTATTAGATCTCAAAACCACAGGCACAAGAGGACACCGTGGACGCGCCAAATaGGACCGTAGAATCGATGGG | + |
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Preference number: 4 (lower is better) Translates to: DMTQNGLLDLKTTGTRGHRGRAK*DRRIDG Trigger: CCCATCGATTCTACGGTCTCATTTGGCGCGTCCACG...GTGTCCTCTTGTGCCTGTGGTTTTGAGATCTAATAGGCCATTCTGTGTCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | CAGTATTACATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACGCCGATGGCAATGTCTaGGGCTTCTCTCGCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: QYYMVGTSGDFLKDDTAHADGNV*GFSRRV Trigger: CACTCTGCGAGAGAAGCCTCAGACATTGCCATCGGC...GTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | CAGTATTACATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACTGGGCAAGCCACCAATaGGCGCTGTCCCATGAATGC | + |
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Preference number: 4 (lower is better) Translates to: QYYMVGTSGDFLKDDTAHWASHQ*ALSHEC Trigger: GCATTCATGGGACAGCGCTCATTGGTGGCTTGCCCA...GTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR GCA 90 bp | ATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACATGGAAAGTCTCTCGCAGAGTGTATaGCCTCGTGGACGCGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: MVGTSGDFLKDDTAHMESLSQSV*PRGRAK Trigger: TTTGGCGCGTCCACGAGGGCATACACTCTGCGAGAG...ACTTTCCATGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | CAGTATTACATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACGGCGAGGTTCGGGTATaGCATGGGCAAGCCACCAAT | + |
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Preference number: 4 (lower is better) Translates to: QYYMVGTSGDFLKDDTAHGEVRV*HGQATN Trigger: ATTGGTGGCTTGCCCATGCCATACCCGAACCTCGCC...GTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | TTAGCCTGTCCTGTGACACTGGCTACAGATGAGGGGAACTCAAAATGGCCTCATCTGCAGGGTTTGGTGTaGGATTTATGGCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LACPVTLATDEGNSKWPHLQGLV*DLWPLL Trigger: CAGCAGTGGCCATAAATCCCACACCAAACCCTGCAG...ATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTGTCACAGGACAGGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | AGAAGGGACTGGGAAGCCTCTCTCTACACTTCAAGCTGCCTGACTCAGTCCTTATTGGTGTGGGATTTATaGCCACTGCTGATGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: RRDWEASLYTSSCLTQSLLVWDL*PLLMAQ Trigger: TTGTGCCATCAGCAGTGGCCATAAATCCCACACCAA...TAAGGACTGAGTCAGGCAGCTTGAAGTGTAGAGAGAGGCTTCCCAGTCCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | ATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACATGGAAAGTCGAGAGCATGACTGGTaGTCGATAGTGAAGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: MVGTSGDFLKDDTAHMESREHDW*SIVKSH Trigger: GTGTGACTTCACTATCGACCACCAGTCATGCTCTCG...ACTTTCCATGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | CAGTATTACATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACTCCTTTCACAGCCGATaGCAATGTCTGAGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QYYMVGTSGDFLKDDTAHSFHSR*QCLRLL Trigger: GAGAAGCCTCAGACATTGCCATCGGCTGTGAAAGGA...GTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR GCA 90 bp | ATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACTGCACACATGGAAAGTCTCAGGGTTATAGACTaGAGGGTTTGGTGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: MVGTSGDFLKDDTAHMESLRVID*RVWCGI Trigger: AATCCCACACCAAACCCTGCAGTCTATAACCCTGAG...ACTTTCCATGTGTGCAGTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | CTGGTCTCAGTATTACATGGTTGGGACCTCAGGAGACTTTCTGAAAGACGATACACTCGAGAGCATGACTaGTGGTCGATAGTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LVSVLHGWDLRRLSERRYTREHD*WSIVKS Trigger: TGACTTCACTATCGACCACCAGTCATGCTCTCGAGT...GTATCGTCTTTCAGAAAGTCTCCTGAGGTCCCAACCATGTAATACTGAGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CCA 90 bp | CTGTACAAAGCTCGTACAATGGTTCCTACCTTGTCTCCTGTTAGCCAGGTCTATCGTATTTCTTCTTCTTaGGTTCATTCACAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LYKARTMVPTLSPVSQVYRISSS*VHSQPQ Trigger: CTGAGGCTGTGAATGAACCCAAGAAGAAGAAATACG...ATAGACCTGGCTAACAGGAGACAAGGTAGGAACCATTGTACGAGCTTTGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR TCA 90 bp | CACTTAAAGCAGAAAAGGCCTATTACACAAATGTACAAATCTGTACAAAGCTCGCCATCCGCTTCTTCTTaGCTGGAACCACTGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HLKQKRPITQMYKSVQSSPSASS*LEPLLS Trigger: AGACAGCAGTGGTTCCAGTCAAGAAGAAGCGGATGG...CGAGCTTTGTACAGATTTGTACATTTGTGTAATAGGCCTTTTCTGCTTTAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS GCA 90 bp | GAGCCAGAGCCCTCCATCCGCTTCTTGACTGGAACCACTGCTGTCTaGACCATGTTCCGGAACCGACCAACAGACGGATCCACGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EPEPSIRFLTGTTAV*TMFRNRPTDGSTSS Trigger: AGAGGACGTGGATCCGTCTGTTGGTCGGTTCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGCGGATGGAGGGCTCTGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105919.2 |
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| CDS-3UTR CAA 90 bp | GCACAGGGACATCGCCAGGACAGTCGGCTCAGAAGGGACTGGGAAGCCTCTCTCAGTCCCAACAAGCCCTaGAGTTCATCATCCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: AQGHRQDSRLRRDWEASLSPNKP*SSSSSP Trigger: CGGAGAGGATGATGAACTCAAGGGCTTGTTGGGACT...GAGAGAGGCTTCCCAGTCCCTTCTGAGCCGACTGTCCTGGCGATGTCCCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS GCA 90 bp | CCAGAGCCCTCCATCCGCTTCTTCTTGACTGGAACCACTGCTGTCTaGACCATGTTCCGGAACCGACCAACAGACGGATCCACGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PEPSIRFFLTGTTAV*TMFRNRPTDGSTSS Trigger: AGAGGACGTGGATCCGTCTGTTGGTCGGTTCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGAAGCGGATGGAGGGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS TCA 90 bp | TCTCCGCCCATCTTCTCATCTCCTTTCACAGCCGATGGCAATGTCTaGGGCTTCTCTCGCAGAGTGTATGCCCTCGTGGACGCGCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SPPIFSSPFTADGNV*GFSRRVYALVDAPN Trigger: ATTTGGCGCGTCCACGAGGGCATACACTCTGCGAGAGAAGCCTCAGACATTGCCATCGGCTGTGAAAGGAGATGAGAAGATGGGCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS TCA 90 bp | GGTTATCCAGCTCGGTCTCCTCTTCGGGAAGTCCCAACAAGCCCTTaGGTTCATCATCCTCTCCGCCCATCTTCTCATCTCCTTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GYPARSPLREVPTSP*VHHPLRPSSHLLSQ Trigger: CTGTGAAAGGAGATGAGAAGATGGGCGGAGAGGATGATGAACTCAAGGGCTTGTTGGGACTTCCCGAAGAGGAGACCGAGCTGGATAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CCA 90 bp | TTCATCATCCTCTCCGCCCATCTTCTCATCTCCTTTCACAGCCGATaGCAATGTCTGAGGCTTCTCTCGCAGAGTGTATGCCCTCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: FIILSAHLLISFHSR*QCLRLLSQSVCPRG Trigger: TCCACGAGGGCATACACTCTGCGAGAGAAGCCTCAGACATTGCCATCGGCTGTGAAAGGAGATGAGAAGATGGGCGGAGAGGATGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CCA 90 bp | TGTGTGCTGTTGAGGTCTATCAAGAAAACTCTCTTCAGGTGTTTGTaGTACACCAGCGCTGCGTGGACTCGAGAGCATGACTGGTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: CVLLRSIKKTLFRCL*YTSAAWTREHDWWS Trigger: CGACCACCAGTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGTTTTCTTGATAGACCTCAACAGCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGGACTGGGAAGCCTCTCTCTACACTTCAAGCTGCCTGACTCAGTCCTTATCCACGTCCTCTGGGTaGATGATCTCGTCATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RRDWEASLYTSSCLTQSLSTSSG*MISSSS Trigger: TGAGGATGACGAGATCATCAACCCAGAGGACGTGGA...TAAGGACTGAGTCAGGCAGCTTGAAGTGTAGAGAGAGGCTTCCCAGTCCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTCCTGTTCACCAGGAACTGCCTCAGGGCACACACCAACAGTGAGGCCGTGCCATGTGTGCTGTaGAGGTCTATCAAGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: IVFLFTRNCLRAHTNSEAVPCVL*RSIKKT Trigger: AGTTTTCTTGATAGACCTCAACAGCACACATGGCAC...GGCCTCACTGTTGGTGTGTGCCCTGAGGCAGTTCCTGGTGAACAGGAAGACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CAA 90 bp | CACTGGCTACAGATGAGGGGAACTCAAAATGGCCTCATGCCACCAGACATGACAATCGATGGGAATCTGTaGAGGCTTGTGAGGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HWLQMRGTQNGLMPPDMTIDGNL*RLVRFQ Trigger: CTGGAACCTCACAAGCCTCAACAGATTCCCATCGAT...TGTCATGTCTGGTGGCATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS CCA 90 bp | ATCAAGAAAACTCTCTTCAGGTGTTTGTGGTACACCAGCGCTGCGTaGACTCGAGAGCATGACTGGTGGTCGATAGTGAAGTCACACAGA | + |
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Preference number: 5 (lower is better) Translates to: IKKTLFRCLWYTSAA*TREHDWWSIVKSHR Trigger: TCTGTGTGACTTCACTATCGACCACCAGTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGTTTTCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS-3UTR CAA 90 bp | ACACTGGCTACAGATGAGGGGAACTCAAAATGGCCTCATGCCACCAGACATGACGCGTATTTCTTCTTCTaGGGTTCATTCACAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TLATDEGNSKWPHATRHDAYFFF*GSFTAS Trigger: TGAGGCTGTGAATGAACCCAAGAAGAAGAAATACGC...GTCATGTCTGGTGGCATGAGGCCATTTTGAGTTCCCCTCATCTGTAGCCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS-3UTR CAA 90 bp | AATGGCCTATTAGATCTCAAAACCACAGGCACAAGAGGACACTCGTTTACTGTGTATAGACTGCAGGGTTaGGTGTGGGATTTATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NGLLDLKTTGTRGHSFTVYRLQG*VWDLWP Trigger: TGGCCATAAATCCCACACCAAACCCTGCAGTCTATA...CACAGTAAACGAGTGTCCTCTTGTGCCTGTGGTTTTGAGATCTAATAGGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS TCA 72 bp | CCAGGCCCAGAGAGCCAGAGCCCTCCATCCGCTTCTTaGCTGGAACCACTGCTGTCTGCACCATGTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PGPESQSPPSAS*LEPLLSAPCSG Trigger: TCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGCGGATGGAGGGCTCTGGCTCTCTGGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105919.2 |
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| CDS CCA 72 bp | GCCCAGAGAGCCAGAGCCCTCCATCCGCTTCTTGACTaGAACCACTGCTGTCTGCACCATGTTCCGGAACCG | + |
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Preference number: 6 (lower is better) Translates to: AQRARALHPLLD*NHCCLHHVPEP Trigger: CGGTTCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGCGGATGGAGGGCTCTGGCTCTCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105919.2 |
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| CDS TCA 72 bp | GGCCCAGAGAGCCAGAGCCCTCCATCCGCTTCTTCTTaGCTGGAACCACTGCTGTCTGCACCATGTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GPESQSPPSASS*LEPLLSAPCSG Trigger: TCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGAAGCGGATGGAGGGCTCTGGCTCTCTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS GCA 72 bp | CCCTCCATCCGCTTCTTGACTGGAACCACTGCTGTCTaGACCATGTTCCGGAACCGACCAACAGACGGATCC | + |
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Preference number: 6 (lower is better) Translates to: PSIRFLTGTTAV*TMFRNRPTDGS Trigger: GGATCCGTCTGTTGGTCGGTTCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGCGGATGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105919.2 |
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| CDS CCA 72 bp | TGGTACACCAGCGCTGCGTGGACTCGAGAGCATGACTaGTGGTCGATAGTGAAGTCACACAGATCGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: WYTSAAWTREHD*WSIVKSHRSGF Trigger: GAACCCCGATCTGTGTGACTTCACTATCGACCACCAGTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS TCA 72 bp | GCTCGGTCTCCTCTTCGGGAAGTCCCAACAAGCCCTTaGGTTCATCATCCTCTCCGCCCATCTTCTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ARSPLREVPTSP*VHHPLRPSSHL Trigger: GAGATGAGAAGATGGGCGGAGAGGATGATGAACTCAAGGGCTTGTTGGGACTTCCCGAAGAGGAGACCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS GCA 72 bp | TCCATCCGCTTCTTCTTGACTGGAACCACTGCTGTCTaGACCATGTTCCGGAACCGACCAACAGACGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SIRFFLTGTTAV*TMFRNRPTDGS Trigger: GGATCCGTCTGTTGGTCGGTTCCGGAACATGGTGCAGACAGCAGTGGTTCCAGTCAAGAAGAAGCGGATGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030702.14 |
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| CDS CCA 72 bp | ACTCTCTTCAGGTGTTTGTGGTACACCAGCGCTGCGTaGACTCGAGAGCATGACTGGTGGTCGATAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLFRCLWYTSAA*TREHDWWSIVK Trigger: CTTCACTATCGACCACCAGTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CCA 72 bp | CTCTCCGCCCATCTTCTCATCTCCTTTCACAGCCGATaGCAATGTCTGAGGCTTCTCTCGCAGAGTGTATGC | + |
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Preference number: 6 (lower is better) Translates to: LSAHLLISFHSR*QCLRLLSQSVC Trigger: GCATACACTCTGCGAGAGAAGCCTCAGACATTGCCATCGGCTGTGAAAGGAGATGAGAAGATGGGCGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CAA 72 bp | AGCTCGGTCTCCTCTTCGGGAAGTCCCAACAAGCCCTaGAGTTCATCATCCTCTCCGCCCATCTTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSVSSSGSPNKP*SSSSSPPIFSS Trigger: AGATGAGAAGATGGGCGGAGAGGATGATGAACTCAAGGGCTTGTTGGGACTTCCCGAAGAGGAGACCGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS TCA 72 bp | ATCTTCTCATCTCCTTTCACAGCCGATGGCAATGTCTaGGGCTTCTCTCGCAGAGTGTATGCCCTCGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: IFSSPFTADGNV*GFSRRVYALVD Trigger: GTCCACGAGGGCATACACTCTGCGAGAGAAGCCTCAGACATTGCCATCGGCTGTGAAAGGAGATGAGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CCA 72 bp | TCACAGCCTCAGGGTTATAGACTGCAGGGTTTGGTGTaGGATTTATGGCCACTGCTGATGGCACAACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SQPQGYRLQGLV*DLWPLLMAQQE Trigger: CTCCTGTTGTGCCATCAGCAGTGGCCATAAATCCCACACCAAACCCTGCAGTCTATAACCCTGAGGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CAA 90 bp | CCATGTGTGCTGTTGAGGTCTATCAAGAAAACTCTCTTCAGGTGTTaGTGGTACACCAGCGCTGCGTGGACTCGAGAGCATGACTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PCVLLRSIKKTLFRC*WYTSAAWTREHDWW Trigger: CCACCAGTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGTTTTCTTGATAGACCTCAACAGCACACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CAA 90 bp | AGGTTATCCAGCTCGGTCTCCTCTTCGGGAAGTCCCAACAAGCCCTaGAGTTCATCATCCTCTCCGCCCATCTTCTCATCTCCTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RLSSSVSSSGSPNKP*SSSSSPPIFSSPFT Trigger: TGTGAAAGGAGATGAGAAGATGGGCGGAGAGGATGATGAACTCAAGGGCTTGTTGGGACTTCCCGAAGAGGAGACCGAGCTGGATAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CCA 72 bp | TTGAGGTCTATCAAGAAAACTCTCTTCAGGTGTTTGTaGTACACCAGCGCTGCGTGGACTCGAGAGCATGAC | + |
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Preference number: 6 (lower is better) Translates to: LRSIKKTLFRCL*YTSAAWTREHD Trigger: GTCATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGTTTTCTTGATAGACCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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| CDS CAA 72 bp | CTGTTGAGGTCTATCAAGAAAACTCTCTTCAGGTGTTaGTGGTACACCAGCGCTGCGTGGACTCGAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLRSIKKTLFRC*WYTSAAWTREH Trigger: ATGCTCTCGAGTCCACGCAGCGCTGGTGTACCACAAACACCTGAAGAGAGTTTTCTTGATAGACCTCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030702.14 ENSMUST00000105919.2 |
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